3T0QA

Motor domain structure of the kar3-like kinesin from ashbya gossypii
Total Genus 104
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
104
sequence length
339
structure length
304
Chain Sequence
GNIRVYCRVRPPLLNEPQDMSHILIEKFNEGAQSLTINRNEILSYNFQFDMIFEPSHTNKEIFEEIRQLVQSSLDGYNVCIFAYGQTGSGKTYTMLNAGDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTILKKAERSSRSHSVFMVHINGRNLHTGETSQGKLNLVDLAGSERINTGERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASKVNS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords AGR253Wp
publication title Crystal structure of the Kar3-like kinesin motor domain from the filamentous fungus Ashbya gossypii.
pubmed doi rcsb
source organism Ashbya gossypii
molecule tags Motor protein
total genus 104
structure length 304
sequence length 339
ec nomenclature
pdb deposition date 2011-07-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 3t0qA00
2OWMA 2X7EA 1GOJA 2VVGA 5LT0A 1F9TA 4B7BA 2FKYA 4PFPA 1LKXA 4PJLA 3NWNA 3DC4A 4A1ZA 4A50A 1VFVA 1D0YA 2ZFIA 2XAEA 2XT3A 5LT4A 3X2TA 1VOMA 3KINA 3LREA 3T0QA 2ZFJA 1MKJA 2ZFKA 4A51A 4AS7A 3DCBA 4E7ZA 2KINA 1RY6A 1SDMA 4ZCAA 3U06A 3HQDA 2GM1A 4BXNA 2X7DA 3BFNA 1V8KA 1BR1A 1MMGA 3L1CA 2WOGA 1MNEA 4Y05A 1F9WA 3KARA 4PJJA 1II6A 3ZFCA 2HEHA 5LT3A 1VFZA 2ZFLA 1FMWA 5LT2A 3B6VA 3B6UA 2FMEA 1V8JA 1G8XA 1LVKA 1BG2A 2Y65A 2VASA 1D0ZA 3CJOA 1F9VA 4A5YA 1D1CA 4PJMA 3K5EA 3PXNA 1T5CA 4FRZA 1D1BA 1I5SA 3ZFDA 4E7SA 2Y5WA 3CNZA 1F9UA 2UYIA 1Q0BA 2FL2A 5LT1A 3KENA 4PK4A 1I6IA 1CZ7A 5HLEA 4DBRA 1D0XA 2MYSA 2G1QA 4GKRA 2X51A 2FL6A 1MMNA 3H4SA 2ZFMA 3WPNA 2Q2ZA 3GBJA 3L9HA 1X88A 1MMAA 1D1AA 1BR4A 4PFOA 1KK7A 3WRDA 4BBGA 1MMDA 2X2RA 1YRSA 2V26A 4A14A 3K3BA 4HNAK 4ANJA 1VFXA 5GSZA 1VFWA 2Q2YA 4ETPA 3COBA 4ZHIA 4PJNA 2GRYA 1N6MA 1BR2A 2VB6A 4A28A 4LNUK 4UBFA 2PG2A 4AP0A 4DBQA 4BN2A 4H1GA 2UYMA 3ZCWA 2X7CA 2NCDA 2IEHA 1FMVA
chains in the Genus database with same CATH superfamily
2OWMA 2X7EA 1GOJA 2VVGA 5LT0A 1F9TA 4B7BA 2FKYA 4PFPA 1LKXA 4PJLA 3NWNA 3DC4A 4A1ZA 4A50A 1VFVA 1D0YA 2ZFIA 2XAEA 2XT3A 5LT4A 3X2TA 1VOMA 3KINA 3LREA 3T0QA 2ZFJA 4GKPA 1MKJA 2ZFKA 4A51A 4AS7A 3DCBA 4E7ZA 2KINA 1RY6A 1SDMA 4ZCAA 3U06A 3HQDA 2GM1A 4BXNA 2X7DA 3BFNA 1V8KA 1BR1A 1MMGA 3L1CA 2WOGA 1MNEA 4Y05A 1F9WA 3KARA 4PJJA 1II6A 3ZFCA 2HEHA 5LT3A 1VFZA 2ZFLA 1FMWA 5LT2A 3B6VA 3B6UA 2FMEA 1V8JA 1G8XA 1LVKA 1BG2A 2Y65A 2VASA 1D0ZA 3CJOA 1F9VA 4A5YA 1D1CA 4PJMA 3K5EA 3PXNA 1T5CA 4FRZA 1D1BA 1I5SA 3ZFDA 4E7SA 2Y5WA 3CNZA 1F9UA 2UYIA 1Q0BA 2FL2A 5LT1A 3KENA 4PK4A 1I6IA 1CZ7A 5HLEA 4DBRA 1D0XA 2MYSA 2G1QA 4GKRA 2X51A 2FL6A 4GKQA 1MMNA 3H4SA 2ZFMA 3WPNA 2Q2ZA 3GBJA 3L9HA 1X88A 1MMAA 1D1AA 4ETPB 1BR4A 4PFOA 1KK7A 3WRDA 4BBGA 1MMDA 2X2RA 2O0AA 1YRSA 2V26A 4A14A 3K3BA 4HNAK 4ANJA 1VFXA 5GSZA 1VFWA 2Q2YA 4ETPA 3COBA 4ZHIA 4PJNA 2GRYA 1N6MA 1BR2A 2VB6A 4A28A 4LNUK 4UBFA 2PG2A 4AP0A 4DBQA 4BN2A 4H1GA 2UYMA 3ZCWA 2X7CA 2NCDA 2IEHA 1FMVA
chains in the Genus database with same CATH topology
2OWMA 2X7EA 1GOJA 2VVGA 5LT0A 1F9TA 4B7BA 2FKYA 4PFPA 1LKXA 4PJLA 3NWNA 3DC4A 4A1ZA 4A50A 1VFVA 1D0YA 2ZFIA 2XAEA 2XT3A 5LT4A 3X2TA 1VOMA 3KINA 3LREA 3T0QA 2ZFJA 1MKJA 2ZFKA 4A51A 4AS7A 3DCBA 4E7ZA 2KINA 1RY6A 1SDMA 4ZCAA 3U06A 3HQDA 2GM1A 4BXNA 2X7DA 3BFNA 1V8KA 1BR1A 1MMGA 3L1CA 2WOGA 1MNEA 4Y05A 1F9WA 3KARA 4PJJA 1II6A 3ZFCA 2HEHA 5LT3A 1VFZA 2ZFLA 1FMWA 5LT2A 3B6VA 3B6UA 2FMEA 1V8JA 1G8XA 1LVKA 1BG2A 2Y65A 2VASA 1D0ZA 3CJOA 1F9VA 4A5YA 1D1CA 4PJMA 3K5EA 3PXNA 1T5CA 4FRZA 1D1BA 1I5SA 3ZFDA 4E7SA 2Y5WA 3CNZA 1F9UA 2UYIA 1Q0BA 2FL2A 5LT1A 3KENA 4PK4A 1I6IA 1CZ7A 5HLEA 4DBRA 1D0XA 2MYSA 2G1QA 4GKRA 2X51A 2FL6A 1MMNA 3H4SA 2ZFMA 3WPNA 2Q2ZA 3GBJA 3L9HA 1X88A 1MMAA 1D1AA 1BR4A 4PFOA 1KK7A 3WRDA 4BBGA 1MMDA 2X2RA 1YRSA 2V26A 4A14A 3K3BA 4HNAK 4ANJA 1VFXA 5GSZA 1VFWA 2Q2YA 4ETPA 3COBA 4ZHIA 4PJNA 2GRYA 1N6MA 1BR2A 2VB6A 4A28A 4LNUK 4UBFA 2PG2A 4AP0A 4DBQA 4BN2A 4H1GA 2UYMA 3ZCWA 2X7CA 2NCDA 2IEHA 1FMVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2OWM A;  2X7E A;  1GOJ A;  2VVG A;  5LT0 A;  1F9T A;  4B7B A;  2FKY A;  4PFP A;  1LKX A;  4PJL A;  3NWN A;  3DC4 A;  4A1Z A;  4A50 A;  1VFV A;  1D0Y A;  2ZFI A;  2XAE A;  2XT3 A;  5LT4 A;  3X2T A;  1VOM A;  3KIN A;  3LRE A;  3T0Q A;  2ZFJ A;  1MKJ A;  2ZFK A;  4A51 A;  4AS7 A;  3DCB A;  4E7Z A;  2KIN A;  1RY6 A;  1SDM A;  4ZCA A;  3U06 A;  3HQD A;  2GM1 A;  4BXN A;  2X7D A;  3BFN A;  1V8K A;  1BR1 A;  1MMG A;  3L1C A;  2WOG A;  1MNE A;  4Y05 A;  1F9W A;  3KAR A;  4PJJ A;  1II6 A;  3ZFC A;  2HEH A;  5LT3 A;  1VFZ A;  2ZFL A;  1FMW A;  5LT2 A;  3B6V A;  3B6U A;  2FME A;  1V8J A;  1G8X A;  1LVK A;  1BG2 A;  2Y65 A;  2VAS A;  1D0Z A;  3CJO A;  1F9V A;  4A5Y A;  1D1C A;  4PJM A;  3K5E A;  3PXN A;  1T5C A;  4FRZ A;  1D1B A;  1I5S A;  3ZFD A;  4E7S A;  2Y5W A;  3CNZ A;  1F9U A;  2UYI A;  1Q0B A;  2FL2 A;  5LT1 A;  3KEN A;  4PK4 A;  1I6I A;  1CZ7 A;  5HLE A;  4DBR A;  1D0X A;  2MYS A;  2G1Q A;  4GKR A;  2X51 A;  2FL6 A;  1MMN A;  3H4S A;  2ZFM A;  3WPN A;  2Q2Z A;  3GBJ A;  3L9H A;  1X88 A;  1MMA A;  1D1A A;  1BR4 A;  4PFO A;  1KK7 A;  3WRD A;  4BBG A;  1MMD A;  2X2R A;  1YRS A;  2V26 A;  4A14 A;  3K3B A;  4HNA K;  4ANJ A;  1VFX A;  5GSZ A;  1VFW A;  2Q2Y A;  4ETP A;  3COB A;  4ZHI A;  4PJN A;  2GRY A;  1N6M A;  1BR2 A;  2VB6 A;  4A28 A;  4LNU K;  4UBF A;  2PG2 A;  4AP0 A;  4DBQ A;  4BN2 A;  4H1G A;  2UYM A;  3ZCW A;  2X7C A;  2NCD A;  2IEH A;  1FMV A; 
#chains in the Genus database with same CATH topology
 2OWM A;  2X7E A;  1GOJ A;  2VVG A;  5LT0 A;  1F9T A;  4B7B A;  2FKY A;  4PFP A;  1LKX A;  4PJL A;  3NWN A;  3DC4 A;  4A1Z A;  4A50 A;  1VFV A;  1D0Y A;  2ZFI A;  2XAE A;  2XT3 A;  5LT4 A;  3X2T A;  1VOM A;  3KIN A;  3LRE A;  3T0Q A;  2ZFJ A;  4GKP A;  1MKJ A;  2ZFK A;  4A51 A;  4AS7 A;  3DCB A;  4E7Z A;  2KIN A;  1RY6 A;  1SDM A;  4ZCA A;  3U06 A;  3HQD A;  2GM1 A;  4BXN A;  2X7D A;  3BFN A;  1V8K A;  1BR1 A;  1MMG A;  3L1C A;  2WOG A;  1MNE A;  4Y05 A;  1F9W A;  3KAR A;  4PJJ A;  1II6 A;  3ZFC A;  2HEH A;  5LT3 A;  1VFZ A;  2ZFL A;  1FMW A;  5LT2 A;  3B6V A;  3B6U A;  2FME A;  1V8J A;  1G8X A;  1LVK A;  1BG2 A;  2Y65 A;  2VAS A;  1D0Z A;  3CJO A;  1F9V A;  4A5Y A;  1D1C A;  4PJM A;  3K5E A;  3PXN A;  1T5C A;  4FRZ A;  1D1B A;  1I5S A;  3ZFD A;  4E7S A;  2Y5W A;  3CNZ A;  1F9U A;  2UYI A;  1Q0B A;  2FL2 A;  5LT1 A;  3KEN A;  4PK4 A;  1I6I A;  1CZ7 A;  5HLE A;  4DBR A;  1D0X A;  2MYS A;  2G1Q A;  4GKR A;  2X51 A;  2FL6 A;  4GKQ A;  1MMN A;  3H4S A;  2ZFM A;  3WPN A;  2Q2Z A;  3GBJ A;  3L9H A;  1X88 A;  1MMA A;  1D1A A;  4ETP B;  1BR4 A;  4PFO A;  1KK7 A;  3WRD A;  4BBG A;  1MMD A;  2X2R A;  2O0A A;  1YRS A;  2V26 A;  4A14 A;  3K3B A;  4HNA K;  4ANJ A;  1VFX A;  5GSZ A;  1VFW A;  2Q2Y A;  4ETP A;  3COB A;  4ZHI A;  4PJN A;  2GRY A;  1N6M A;  1BR2 A;  2VB6 A;  4A28 A;  4LNU K;  4UBF A;  2PG2 A;  4AP0 A;  4DBQ A;  4BN2 A;  4H1G A;  2UYM A;  3ZCW A;  2X7C A;  2NCD A;  2IEH A;  1FMV A; 
#chains in the Genus database with same CATH homology
 2OWM A;  2X7E A;  1GOJ A;  2VVG A;  5LT0 A;  1F9T A;  4B7B A;  2FKY A;  4PFP A;  1LKX A;  4PJL A;  3NWN A;  3DC4 A;  4A1Z A;  4A50 A;  1VFV A;  1D0Y A;  2ZFI A;  2XAE A;  2XT3 A;  5LT4 A;  3X2T A;  1VOM A;  3KIN A;  3LRE A;  3T0Q A;  2ZFJ A;  1MKJ A;  2ZFK A;  4A51 A;  4AS7 A;  3DCB A;  4E7Z A;  2KIN A;  1RY6 A;  1SDM A;  4ZCA A;  3U06 A;  3HQD A;  2GM1 A;  4BXN A;  2X7D A;  3BFN A;  1V8K A;  1BR1 A;  1MMG A;  3L1C A;  2WOG A;  1MNE A;  4Y05 A;  1F9W A;  3KAR A;  4PJJ A;  1II6 A;  3ZFC A;  2HEH A;  5LT3 A;  1VFZ A;  2ZFL A;  1FMW A;  5LT2 A;  3B6V A;  3B6U A;  2FME A;  1V8J A;  1G8X A;  1LVK A;  1BG2 A;  2Y65 A;  2VAS A;  1D0Z A;  3CJO A;  1F9V A;  4A5Y A;  1D1C A;  4PJM A;  3K5E A;  3PXN A;  1T5C A;  4FRZ A;  1D1B A;  1I5S A;  3ZFD A;  4E7S A;  2Y5W A;  3CNZ A;  1F9U A;  2UYI A;  1Q0B A;  2FL2 A;  5LT1 A;  3KEN A;  4PK4 A;  1I6I A;  1CZ7 A;  5HLE A;  4DBR A;  1D0X A;  2MYS A;  2G1Q A;  4GKR A;  2X51 A;  2FL6 A;  1MMN A;  3H4S A;  2ZFM A;  3WPN A;  2Q2Z A;  3GBJ A;  3L9H A;  1X88 A;  1MMA A;  1D1A A;  1BR4 A;  4PFO A;  1KK7 A;  3WRD A;  4BBG A;  1MMD A;  2X2R A;  1YRS A;  2V26 A;  4A14 A;  3K3B A;  4HNA K;  4ANJ A;  1VFX A;  5GSZ A;  1VFW A;  2Q2Y A;  4ETP A;  3COB A;  4ZHI A;  4PJN A;  2GRY A;  1N6M A;  1BR2 A;  2VB6 A;  4A28 A;  4LNU K;  4UBF A;  2PG2 A;  4AP0 A;  4DBQ A;  4BN2 A;  4H1G A;  2UYM A;  3ZCW A;  2X7C A;  2NCD A;  2IEH A;  1FMV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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