3H4SA

Structure of the complex of a mitotic kinesin with its calcium binding regulator
Total Genus 117

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
376
structure length
359
Chain Sequence
YMKGKIRVYCRIRPLNEKESSEREKQMLTTVDEFTVEHPWKDDKRKQHIYDRVFDMRASQDDIFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGHESNPGLTPRATKELFNILKRDSKRFSFSLKAYMVELYQDTLVDLLLPKRLKLEIKKDSKGMVFVENVTTIPISTLEELRMILERGSEREESSRSHLILSVVIESIDLQTQSAARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVIGALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLLYASRVRTIVNDPSKHISSKEMVRLKKLVAYWKEQAGKKGEEEDLVDIEEDRTR
5010015020025030030025020015010050
020406080100Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Motor protein/calcium binding protein
source organism Arabidopsis thaliana
publication title Structure of the complex of a mitotic kinesin with its calcium binding regulator.
pubmed doi rcsb
molecule keywords Kinesin-like calmodulin-binding protein
total genus 117
structure length 359
sequence length 376
ec nomenclature
pdb deposition date 2009-04-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 3h4sA01
4GKRA 3CNZA 3BFNA 4H1GA 3GBJA 1GOJA 1BR2A 1VFXA 2X7EA 1F9TA 1V8JA 1RY6A 5GSZA 2OWMA 3KENA 4BXNA 1BR4A 2X7DA 3B6UA 1LKXA 3ZCWA 4BBGA 2FL6A 3NWNA 3HQDA 2UYIA 2ZFKA 2ZFMA 4UBFA 2IEHA 4ZHIA 2X2RA 2ZFIA 2VB6A 2V26A 3KINA 2NCDA 1VFZA 2WOGA 1BG2A 4BN2A 4ANJA 4A51A 2GRYA 1KK7A 1F9VA 4B7BA 3KARA 1F9WA 1LVKA 2MYSA 1D0YA 1II6A 4ETPA 4A1ZA 2Y5WA 3ZFDA 3DCBA 1MMAA 1F9UA 5HLEA 2X7CA 3WPNA 4PFPA 2FKYA 1CZ7A 1MKJA 2G1QA 2Q2ZA 2FL2A 5LT4A 4E7SA 4AP0A 5LT3A 1G8XA 4A28A 1I5SA 2XAEA 2KINA 4A5YA 3X2TA 4A14A 2ZFJA 1D0ZA 1D1BA 2UYMA 2ZFLA 4PJLA 4PJJA 5LT1A 2FMEA 3COBA 1D0XA 4PJMA 3U06A 3H4SA 4PK4A 1MMNA 1FMVA 3PXNA 1VOMA 3ZFCA 2Q2YA 3K3BA 4LNUK 4PJNA 2HEHA 3L1CA 2X51A 1MNEA 4Y05A 3CJOA 1X88A 1D1AA 2XT3A 5LT0A 4DBQA 1VFVA 5LT2A 1VFWA 1MMDA 1D1CA 1N6MA 2GM1A 2Y65A 3L9HA 4HNAK 1I6IA 1Q0BA 3K5EA 2PG2A 4A50A 3DC4A 3B6VA 3WRDA 3T0QA 1MMGA 1SDMA 1YRSA 4FRZA 2VVGA 1V8KA 4ZCAA 4PFOA 1T5CA 1BR1A 2VASA 1FMWA 4DBRA 4E7ZA 3LREA 4AS7A
chains in the Genus database with same CATH superfamily
4GKRA 3CNZA 3BFNA 4H1GA 3GBJA 1GOJA 1BR2A 1VFXA 2X7EA 1F9TA 1V8JA 4GKQA 1RY6A 5GSZA 2OWMA 3KENA 4BXNA 1BR4A 2X7DA 3B6UA 1LKXA 3ZCWA 4BBGA 2FL6A 3NWNA 3HQDA 2UYIA 2ZFKA 2ZFMA 4UBFA 2IEHA 4ZHIA 2X2RA 2ZFIA 2VB6A 2V26A 3KINA 2NCDA 1VFZA 2WOGA 1BG2A 2O0AA 4BN2A 4ANJA 4GKPA 4A51A 2GRYA 1KK7A 1F9VA 4B7BA 3KARA 1F9WA 1LVKA 2MYSA 1D0YA 1II6A 4ETPA 4A1ZA 2Y5WA 3ZFDA 3DCBA 1MMAA 1F9UA 5HLEA 2X7CA 3WPNA 4PFPA 2FKYA 1CZ7A 1MKJA 2G1QA 2Q2ZA 2FL2A 5LT4A 4E7SA 4AP0A 5LT3A 1G8XA 4A28A 1I5SA 2XAEA 2KINA 4A5YA 3X2TA 4A14A 2ZFJA 1D0ZA 1D1BA 2UYMA 2ZFLA 4PJLA 4PJJA 5LT1A 2FMEA 3COBA 1D0XA 4PJMA 3U06A 3H4SA 4PK4A 1MMNA 1FMVA 3PXNA 1VOMA 3ZFCA 2Q2YA 3K3BA 4LNUK 4PJNA 2HEHA 3L1CA 2X51A 1MNEA 4Y05A 3CJOA 1X88A 1D1AA 2XT3A 5LT0A 4DBQA 1VFVA 5LT2A 1VFWA 1MMDA 1D1CA 1N6MA 2GM1A 2Y65A 3L9HA 4HNAK 1I6IA 1Q0BA 3K5EA 2PG2A 4A50A 4ETPB 3DC4A 3B6VA 3WRDA 3T0QA 1MMGA 1SDMA 1YRSA 4FRZA 2VVGA 1V8KA 4ZCAA 4PFOA 1T5CA 1BR1A 2VASA 1FMWA 4DBRA 4E7ZA 3LREA 4AS7A
chains in the Genus database with same CATH topology
4GKRA 3CNZA 3BFNA 4H1GA 3GBJA 1GOJA 1BR2A 1VFXA 2X7EA 1F9TA 1V8JA 1RY6A 5GSZA 2OWMA 3KENA 4BXNA 1BR4A 2X7DA 3B6UA 1LKXA 3ZCWA 4BBGA 2FL6A 3NWNA 3HQDA 2UYIA 2ZFKA 2ZFMA 4UBFA 2IEHA 4ZHIA 2X2RA 2ZFIA 2VB6A 2V26A 3KINA 2NCDA 1VFZA 2WOGA 1BG2A 4BN2A 4ANJA 4A51A 2GRYA 1KK7A 1F9VA 4B7BA 3KARA 1F9WA 1LVKA 2MYSA 1D0YA 1II6A 4ETPA 4A1ZA 2Y5WA 3ZFDA 3DCBA 1MMAA 1F9UA 5HLEA 2X7CA 3WPNA 4PFPA 2FKYA 1CZ7A 1MKJA 2G1QA 2Q2ZA 2FL2A 5LT4A 4E7SA 4AP0A 5LT3A 1G8XA 4A28A 1I5SA 2XAEA 2KINA 4A5YA 3X2TA 4A14A 2ZFJA 1D0ZA 1D1BA 2UYMA 2ZFLA 4PJLA 4PJJA 5LT1A 2FMEA 3COBA 1D0XA 4PJMA 3U06A 3H4SA 4PK4A 1MMNA 1FMVA 3PXNA 1VOMA 3ZFCA 2Q2YA 3K3BA 4LNUK 4PJNA 2HEHA 3L1CA 2X51A 1MNEA 4Y05A 3CJOA 1X88A 1D1AA 2XT3A 5LT0A 4DBQA 1VFVA 5LT2A 1VFWA 1MMDA 1D1CA 1N6MA 2GM1A 2Y65A 3L9HA 4HNAK 1I6IA 1Q0BA 3K5EA 2PG2A 4A50A 3DC4A 3B6VA 3WRDA 3T0QA 1MMGA 1SDMA 1YRSA 4FRZA 2VVGA 1V8KA 4ZCAA 4PFOA 1T5CA 1BR1A 2VASA 1FMWA 4DBRA 4E7ZA 3LREA 4AS7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4GKR A;  3CNZ A;  3BFN A;  4H1G A;  3GBJ A;  1GOJ A;  1BR2 A;  1VFX A;  2X7E A;  1F9T A;  1V8J A;  1RY6 A;  5GSZ A;  2OWM A;  3KEN A;  4BXN A;  1BR4 A;  2X7D A;  3B6U A;  1LKX A;  3ZCW A;  4BBG A;  2FL6 A;  3NWN A;  3HQD A;  2UYI A;  2ZFK A;  2ZFM A;  4UBF A;  2IEH A;  4ZHI A;  2X2R A;  2ZFI A;  2VB6 A;  2V26 A;  3KIN A;  2NCD A;  1VFZ A;  2WOG A;  1BG2 A;  4BN2 A;  4ANJ A;  4A51 A;  2GRY A;  1KK7 A;  1F9V A;  4B7B A;  3KAR A;  1F9W A;  1LVK A;  2MYS A;  1D0Y A;  1II6 A;  4ETP A;  4A1Z A;  2Y5W A;  3ZFD A;  3DCB A;  1MMA A;  1F9U A;  5HLE A;  2X7C A;  3WPN A;  4PFP A;  2FKY A;  1CZ7 A;  1MKJ A;  2G1Q A;  2Q2Z A;  2FL2 A;  5LT4 A;  4E7S A;  4AP0 A;  5LT3 A;  1G8X A;  4A28 A;  1I5S A;  2XAE A;  2KIN A;  4A5Y A;  3X2T A;  4A14 A;  2ZFJ A;  1D0Z A;  1D1B A;  2UYM A;  2ZFL A;  4PJL A;  4PJJ A;  5LT1 A;  2FME A;  3COB A;  1D0X A;  4PJM A;  3U06 A;  3H4S A;  4PK4 A;  1MMN A;  1FMV A;  3PXN A;  1VOM A;  3ZFC A;  2Q2Y A;  3K3B A;  4LNU K;  4PJN A;  2HEH A;  3L1C A;  2X51 A;  1MNE A;  4Y05 A;  3CJO A;  1X88 A;  1D1A A;  2XT3 A;  5LT0 A;  4DBQ A;  1VFV A;  5LT2 A;  1VFW A;  1MMD A;  1D1C A;  1N6M A;  2GM1 A;  2Y65 A;  3L9H A;  4HNA K;  1I6I A;  1Q0B A;  3K5E A;  2PG2 A;  4A50 A;  3DC4 A;  3B6V A;  3WRD A;  3T0Q A;  1MMG A;  1SDM A;  1YRS A;  4FRZ A;  2VVG A;  1V8K A;  4ZCA A;  4PFO A;  1T5C A;  1BR1 A;  2VAS A;  1FMW A;  4DBR A;  4E7Z A;  3LRE A;  4AS7 A; 
#chains in the Genus database with same CATH topology
 4GKR A;  3CNZ A;  3BFN A;  4H1G A;  3GBJ A;  1GOJ A;  1BR2 A;  1VFX A;  2X7E A;  1F9T A;  1V8J A;  4GKQ A;  1RY6 A;  5GSZ A;  2OWM A;  3KEN A;  4BXN A;  1BR4 A;  2X7D A;  3B6U A;  1LKX A;  3ZCW A;  4BBG A;  2FL6 A;  3NWN A;  3HQD A;  2UYI A;  2ZFK A;  2ZFM A;  4UBF A;  2IEH A;  4ZHI A;  2X2R A;  2ZFI A;  2VB6 A;  2V26 A;  3KIN A;  2NCD A;  1VFZ A;  2WOG A;  1BG2 A;  2O0A A;  4BN2 A;  4ANJ A;  4GKP A;  4A51 A;  2GRY A;  1KK7 A;  1F9V A;  4B7B A;  3KAR A;  1F9W A;  1LVK A;  2MYS A;  1D0Y A;  1II6 A;  4ETP A;  4A1Z A;  2Y5W A;  3ZFD A;  3DCB A;  1MMA A;  1F9U A;  5HLE A;  2X7C A;  3WPN A;  4PFP A;  2FKY A;  1CZ7 A;  1MKJ A;  2G1Q A;  2Q2Z A;  2FL2 A;  5LT4 A;  4E7S A;  4AP0 A;  5LT3 A;  1G8X A;  4A28 A;  1I5S A;  2XAE A;  2KIN A;  4A5Y A;  3X2T A;  4A14 A;  2ZFJ A;  1D0Z A;  1D1B A;  2UYM A;  2ZFL A;  4PJL A;  4PJJ A;  5LT1 A;  2FME A;  3COB A;  1D0X A;  4PJM A;  3U06 A;  3H4S A;  4PK4 A;  1MMN A;  1FMV A;  3PXN A;  1VOM A;  3ZFC A;  2Q2Y A;  3K3B A;  4LNU K;  4PJN A;  2HEH A;  3L1C A;  2X51 A;  1MNE A;  4Y05 A;  3CJO A;  1X88 A;  1D1A A;  2XT3 A;  5LT0 A;  4DBQ A;  1VFV A;  5LT2 A;  1VFW A;  1MMD A;  1D1C A;  1N6M A;  2GM1 A;  2Y65 A;  3L9H A;  4HNA K;  1I6I A;  1Q0B A;  3K5E A;  2PG2 A;  4A50 A;  4ETP B;  3DC4 A;  3B6V A;  3WRD A;  3T0Q A;  1MMG A;  1SDM A;  1YRS A;  4FRZ A;  2VVG A;  1V8K A;  4ZCA A;  4PFO A;  1T5C A;  1BR1 A;  2VAS A;  1FMW A;  4DBR A;  4E7Z A;  3LRE A;  4AS7 A; 
#chains in the Genus database with same CATH homology
 4GKR A;  3CNZ A;  3BFN A;  4H1G A;  3GBJ A;  1GOJ A;  1BR2 A;  1VFX A;  2X7E A;  1F9T A;  1V8J A;  1RY6 A;  5GSZ A;  2OWM A;  3KEN A;  4BXN A;  1BR4 A;  2X7D A;  3B6U A;  1LKX A;  3ZCW A;  4BBG A;  2FL6 A;  3NWN A;  3HQD A;  2UYI A;  2ZFK A;  2ZFM A;  4UBF A;  2IEH A;  4ZHI A;  2X2R A;  2ZFI A;  2VB6 A;  2V26 A;  3KIN A;  2NCD A;  1VFZ A;  2WOG A;  1BG2 A;  4BN2 A;  4ANJ A;  4A51 A;  2GRY A;  1KK7 A;  1F9V A;  4B7B A;  3KAR A;  1F9W A;  1LVK A;  2MYS A;  1D0Y A;  1II6 A;  4ETP A;  4A1Z A;  2Y5W A;  3ZFD A;  3DCB A;  1MMA A;  1F9U A;  5HLE A;  2X7C A;  3WPN A;  4PFP A;  2FKY A;  1CZ7 A;  1MKJ A;  2G1Q A;  2Q2Z A;  2FL2 A;  5LT4 A;  4E7S A;  4AP0 A;  5LT3 A;  1G8X A;  4A28 A;  1I5S A;  2XAE A;  2KIN A;  4A5Y A;  3X2T A;  4A14 A;  2ZFJ A;  1D0Z A;  1D1B A;  2UYM A;  2ZFL A;  4PJL A;  4PJJ A;  5LT1 A;  2FME A;  3COB A;  1D0X A;  4PJM A;  3U06 A;  3H4S A;  4PK4 A;  1MMN A;  1FMV A;  3PXN A;  1VOM A;  3ZFC A;  2Q2Y A;  3K3B A;  4LNU K;  4PJN A;  2HEH A;  3L1C A;  2X51 A;  1MNE A;  4Y05 A;  3CJO A;  1X88 A;  1D1A A;  2XT3 A;  5LT0 A;  4DBQ A;  1VFV A;  5LT2 A;  1VFW A;  1MMD A;  1D1C A;  1N6M A;  2GM1 A;  2Y65 A;  3L9H A;  4HNA K;  1I6I A;  1Q0B A;  3K5E A;  2PG2 A;  4A50 A;  3DC4 A;  3B6V A;  3WRD A;  3T0Q A;  1MMG A;  1SDM A;  1YRS A;  4FRZ A;  2VVG A;  1V8K A;  4ZCA A;  4PFO A;  1T5C A;  1BR1 A;  2VAS A;  1FMW A;  4DBR A;  4E7Z A;  3LRE A;  4AS7 A; 
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similar chains in the Genus database (?% sequence similarity)
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