1B7BA

Carbamate kinase from enterococcus faecalis
Total Genus 97
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
97
sequence length
307
structure length
307
Chain Sequence
GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDTCVAMTQGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPSPKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAVIDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNKQAIITSLENLGSMSGDEIVGTVV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Carbamate kinase: New structural machinery for making carbamoyl phosphate, the common precursor of pyrimidines and arginine.
pubmed rcsb
molecule tags Transferase
molecule keywords CARBAMATE KINASE
total genus 97
structure length 307
sequence length 307
chains with identical sequence B, C, D
ec nomenclature ec 2.7.2.2: Carbamate kinase.
pdb deposition date 1999-01-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1b7bA00
2JJ4A 3K56A 3L86A 4NDOB 4A7XA 1B7BA 4NDRB 2AP9A 2JI5A 4Q1TA 3D2MA 1GS5A 2R98A 4AXSA 3L76A 3ZZHA 3ZZGA 2V4YA 2BMUA 4OLCA 4JZ8A 2J4LA 4NDOA 2CDQA 2OGXA 3C20A 2BTYA 3EK6A 3AB4A 2W21A 1OH9A 2BNDA 2WE4A 2VA1A 2BRXA 2J5TA 3KZFA 2OGXB 3D40A 2WXBA 3K4OA 3EK5A 3QVFA 2BRIA 2J4JA 3QVHA 4NDQA 1YBDA 3T7BA 2R8VA 2X2WA 3ZZIA 3QUOA 4A7WA 3K4YA 2J4KA 2WE5A 3ZZFA 1GSJA 2JJXA 3S6GA 4NDQB 2J0WA 3AB2A 2E9YA 4I49A 2J0XA 4JZ9A 3S6HA 3NWYA 3C1MA 4AB7A 3K52A 3D2PA 3WWMA 2A1FA 1E19A 2HMFA 3WWNA 4KZTA 1OHBA 3QURA 2V5HA 4JZ7A 2BUFA 3B8GA 3D41A 4F6TA 3LL5A 4NDPA 4USJA 3TVIA 1Z9DA 3AAWA 3QUNA 2J5VA 2AKOA 2IJ9A 3LKKA 2RD5A 2BNEA 3C1NA 2BNFA 4NDRA 4F6TB 3S6KA 4NDPB 1OHAA 3LL9A 3U6UA
chains in the Genus database with same CATH superfamily
2JJ4A 3K56A 3L86A 4NDOB 4A7XA 1B7BA 4NDRB 2AP9A 2JI5A 4Q1TA 3D2MA 1GS5A 2R98A 4AXSA 3L76A 3ZZHA 3ZZGA 2V4YA 2BMUA 4OLCA 4JZ8A 2J4LA 4NDOA 2CDQA 2OGXA 3C20A 2BTYA 3EK6A 3AB4A 2W21A 1OH9A 2BNDA 2WE4A 2VA1A 2BRXA 2J5TA 3KZFA 2OGXB 3D40A 2WXBA 3K4OA 3EK5A 3QVFA 2BRIA 2J4JA 3QVHA 4NDQA 1YBDA 3T7BA 2R8VA 2X2WA 3ZZIA 3QUOA 4A7WA 3K4YA 2J4KA 2WE5A 3ZZFA 1GSJA 2JJXA 3S6GA 4NDQB 2J0WA 3AB2A 2E9YA 4I49A 2J0XA 4JZ9A 3S6HA 3NWYA 3C1MA 4AB7A 3K52A 3D2PA 3WWMA 2A1FA 1E19A 2HMFA 3WWNA 4KZTA 1OHBA 3QURA 2V5HA 4JZ7A 2BUFA 3B8GA 3D41A 4F6TA 3LL5A 4NDPA 4USJA 3TVIA 1Z9DA 3AAWA 3QUNA 2J5VA 2AKOA 2IJ9A 3LKKA 2RD5A 2BNEA 3C1NA 2BNFA 4NDRA 4F6TB 3S6KA 4NDPB 1OHAA 3LL9A 3U6UA
chains in the Genus database with same CATH topology
2JJ4A 3K56A 3L86A 4NDOB 4A7XA 1B7BA 4NDRB 2AP9A 2JI5A 4Q1TA 3D2MA 1GS5A 2R98A 4AXSA 3L76A 3ZZHA 3ZZGA 2V4YA 2BMUA 4OLCA 4JZ8A 2J4LA 4NDOA 2CDQA 2OGXA 3C20A 2BTYA 3EK6A 3AB4A 2W21A 1OH9A 2BNDA 2WE4A 2VA1A 2BRXA 2J5TA 3KZFA 2OGXB 3D40A 2WXBA 3K4OA 3EK5A 3QVFA 2BRIA 2J4JA 3QVHA 4NDQA 1YBDA 3T7BA 2R8VA 2X2WA 3ZZIA 3QUOA 4A7WA 3K4YA 2J4KA 2WE5A 3ZZFA 1GSJA 2JJXA 3S6GA 4NDQB 2J0WA 3AB2A 2E9YA 4I49A 2J0XA 4JZ9A 3S6HA 3NWYA 3C1MA 4AB7A 3K52A 3D2PA 3WWMA 2A1FA 1E19A 2HMFA 3WWNA 4KZTA 1OHBA 3QURA 2V5HA 4JZ7A 2BUFA 3B8GA 3D41A 4F6TA 3LL5A 4NDPA 4USJA 3TVIA 1Z9DA 3AAWA 3QUNA 2J5VA 2AKOA 2IJ9A 3LKKA 2RD5A 2BNEA 3C1NA 2BNFA 4NDRA 4F6TB 3S6KA 4NDPB 1OHAA 3LL9A 3U6UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JJ4 A;  3K56 A;  3L86 A;  4NDO B;  4A7X A;  1B7B A;  4NDR B;  2AP9 A;  2JI5 A;  4Q1T A;  3D2M A;  1GS5 A;  2R98 A;  4AXS A;  3L76 A;  3ZZH A;  3ZZG A;  2V4Y A;  2BMU A;  4OLC A;  4JZ8 A;  2J4L A;  4NDO A;  2CDQ A;  2OGX A;  3C20 A;  2BTY A;  3EK6 A;  3AB4 A;  2W21 A;  1OH9 A;  2BND A;  2WE4 A;  2VA1 A;  2BRX A;  2J5T A;  3KZF A;  2OGX B;  3D40 A;  2WXB A;  3K4O A;  3EK5 A;  3QVF A;  2BRI A;  2J4J A;  3QVH A;  4NDQ A;  1YBD A;  3T7B A;  2R8V A;  2X2W A;  3ZZI A;  3QUO A;  4A7W A;  3K4Y A;  2J4K A;  2WE5 A;  3ZZF A;  1GSJ A;  2JJX A;  3S6G A;  4NDQ B;  2J0W A;  3AB2 A;  2E9Y A;  4I49 A;  2J0X A;  4JZ9 A;  3S6H A;  3NWY A;  3C1M A;  4AB7 A;  3K52 A;  3D2P A;  3WWM A;  2A1F A;  1E19 A;  2HMF A;  3WWN A;  4KZT A;  1OHB A;  3QUR A;  2V5H A;  4JZ7 A;  2BUF A;  3B8G A;  3D41 A;  4F6T A;  3LL5 A;  4NDP A;  4USJ A;  3TVI A;  1Z9D A;  3AAW A;  3QUN A;  2J5V A;  2AKO A;  2IJ9 A;  3LKK A;  2RD5 A;  2BNE A;  3C1N A;  2BNF A;  4NDR A;  4F6T B;  3S6K A;  4NDP B;  1OHA A;  3LL9 A;  3U6U A; 
#chains in the Genus database with same CATH topology
 2JJ4 A;  3K56 A;  3L86 A;  4NDO B;  4A7X A;  1B7B A;  4NDR B;  2AP9 A;  2JI5 A;  4Q1T A;  3D2M A;  1GS5 A;  2R98 A;  4AXS A;  3L76 A;  3ZZH A;  3ZZG A;  2V4Y A;  2BMU A;  4OLC A;  4JZ8 A;  2J4L A;  4NDO A;  2CDQ A;  2OGX A;  3C20 A;  2BTY A;  3EK6 A;  3AB4 A;  2W21 A;  1OH9 A;  2BND A;  2WE4 A;  2VA1 A;  2BRX A;  2J5T A;  3KZF A;  2OGX B;  3D40 A;  2WXB A;  3K4O A;  3EK5 A;  3QVF A;  2BRI A;  2J4J A;  3QVH A;  4NDQ A;  1YBD A;  3T7B A;  2R8V A;  2X2W A;  3ZZI A;  3QUO A;  4A7W A;  3K4Y A;  2J4K A;  2WE5 A;  3ZZF A;  1GSJ A;  2JJX A;  3S6G A;  4NDQ B;  2J0W A;  3AB2 A;  2E9Y A;  4I49 A;  2J0X A;  4JZ9 A;  3S6H A;  3NWY A;  3C1M A;  4AB7 A;  3K52 A;  3D2P A;  3WWM A;  2A1F A;  1E19 A;  2HMF A;  3WWN A;  4KZT A;  1OHB A;  3QUR A;  2V5H A;  4JZ7 A;  2BUF A;  3B8G A;  3D41 A;  4F6T A;  3LL5 A;  4NDP A;  4USJ A;  3TVI A;  1Z9D A;  3AAW A;  3QUN A;  2J5V A;  2AKO A;  2IJ9 A;  3LKK A;  2RD5 A;  2BNE A;  3C1N A;  2BNF A;  4NDR A;  4F6T B;  3S6K A;  4NDP B;  1OHA A;  3LL9 A;  3U6U A; 
#chains in the Genus database with same CATH homology
 2JJ4 A;  3K56 A;  3L86 A;  4NDO B;  4A7X A;  1B7B A;  4NDR B;  2AP9 A;  2JI5 A;  4Q1T A;  3D2M A;  1GS5 A;  2R98 A;  4AXS A;  3L76 A;  3ZZH A;  3ZZG A;  2V4Y A;  2BMU A;  4OLC A;  4JZ8 A;  2J4L A;  4NDO A;  2CDQ A;  2OGX A;  3C20 A;  2BTY A;  3EK6 A;  3AB4 A;  2W21 A;  1OH9 A;  2BND A;  2WE4 A;  2VA1 A;  2BRX A;  2J5T A;  3KZF A;  2OGX B;  3D40 A;  2WXB A;  3K4O A;  3EK5 A;  3QVF A;  2BRI A;  2J4J A;  3QVH A;  4NDQ A;  1YBD A;  3T7B A;  2R8V A;  2X2W A;  3ZZI A;  3QUO A;  4A7W A;  3K4Y A;  2J4K A;  2WE5 A;  3ZZF A;  1GSJ A;  2JJX A;  3S6G A;  4NDQ B;  2J0W A;  3AB2 A;  2E9Y A;  4I49 A;  2J0X A;  4JZ9 A;  3S6H A;  3NWY A;  3C1M A;  4AB7 A;  3K52 A;  3D2P A;  3WWM A;  2A1F A;  1E19 A;  2HMF A;  3WWN A;  4KZT A;  1OHB A;  3QUR A;  2V5H A;  4JZ7 A;  2BUF A;  3B8G A;  3D41 A;  4F6T A;  3LL5 A;  4NDP A;  4USJ A;  3TVI A;  1Z9D A;  3AAW A;  3QUN A;  2J5V A;  2AKO A;  2IJ9 A;  3LKK A;  2RD5 A;  2BNE A;  3C1N A;  2BNF A;  4NDR A;  4F6T B;  3S6K A;  4NDP B;  1OHA A;  3LL9 A;  3U6U A; 
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similar chains in the Genus database (?% sequence similarity)
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