4NDRB

Crystal structure molybdenum storage protein with fully mo-loaded cavity
Total Genus 93
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
93
sequence length
268
structure length
268
Chain Sequence
NSTAELEELLMQRSLTDPQLQAAAAAAADFRILPDATVIKIGGQSVIDRGRAAVYPLVDEIVAARKNHKLLIGTGAGTRARHLYSIAAGLGLPAGVLAQLGSSVADQNAAMLGQLLAKHGIPVVGGAGLSAVPLSLAEVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFIPRISVDEMKAKGLHDSILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAGEHVGTIITAS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
publication title Structural diversity of polyoxomolybdate clusters along the three-fold axis of the molybdenum storage protein.
pubmed doi rcsb
molecule keywords Molybdenum storage protein subunit beta
total genus 93
structure length 268
sequence length 268
ec nomenclature
pdb deposition date 2013-10-27

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 4ndrB00
2BNEA 2HMFA 2J5VA 2W21A 3D40A 3LL9A 3ZZFA 2WE5A 3L86A 2X2WA 2JJXA 1OHBA 2IJ9A 1YBDA 2BMUA 3LKKA 3QUOA 3EK6A 4A7WA 2AP9A 3D41A 2WXBA 2JJ4A 3EK5A 3AAWA 4NDOB 1GS5A 3S6GA 3L76A 2OGXB 1OHAA 2J0XA 4Q1TA 3S6KA 3ZZIA 4NDPB 4NDQA 2J5TA 3QVFA 2E9YA 3NWYA 3U6UA 2AKOA 3LL5A 3K4OA 4NDRA 3ZZGA 3AB2A 4AB7A 3C20A 4JZ7A 1Z9DA 3K52A 2BRXA 2V4YA 4A7XA 4OLCA 3WWNA 2J4KA 3D2PA 3C1MA 2J4JA 2BRIA 2J0WA 4AXSA 3ZZHA 4F6TA 2BUFA 3B8GA 1B7BA 2RD5A 3C1NA 3TVIA 2WE4A 2VA1A 3S6HA 3KZFA 3T7BA 2V5HA 2CDQA 3QVHA 1GSJA 2BTYA 4NDRB 4KZTA 3AB4A 2J4LA 2R8VA 4JZ8A 1OH9A 3QURA 4NDOA 3D2MA 1E19A 2A1FA 3K56A 3WWMA 2OGXA 4F6TB 2BNDA 4NDQB 4USJA 2JI5A 2BNFA 4I49A 3QUNA 4JZ9A 2R98A 4NDPA 3K4YA
chains in the Genus database with same CATH superfamily
2BNEA 2HMFA 2J5VA 2W21A 3D40A 3LL9A 3ZZFA 2WE5A 3L86A 2X2WA 2JJXA 1OHBA 2IJ9A 1YBDA 2BMUA 3LKKA 3QUOA 3EK6A 4A7WA 2AP9A 3D41A 2WXBA 2JJ4A 3EK5A 3AAWA 4NDOB 1GS5A 3S6GA 3L76A 2OGXB 1OHAA 2J0XA 4Q1TA 3S6KA 3ZZIA 4NDPB 4NDQA 2J5TA 3QVFA 2E9YA 3NWYA 3U6UA 2AKOA 3LL5A 3K4OA 4NDRA 3ZZGA 3AB2A 4AB7A 3C20A 4JZ7A 1Z9DA 3K52A 2BRXA 2V4YA 4A7XA 4OLCA 3WWNA 2J4KA 3D2PA 3C1MA 2J4JA 2BRIA 2J0WA 4AXSA 3ZZHA 4F6TA 2BUFA 3B8GA 1B7BA 2RD5A 3C1NA 3TVIA 2WE4A 2VA1A 3S6HA 3KZFA 3T7BA 2V5HA 2CDQA 3QVHA 1GSJA 2BTYA 4NDRB 4KZTA 3AB4A 2J4LA 2R8VA 4JZ8A 1OH9A 3QURA 4NDOA 3D2MA 1E19A 2A1FA 3K56A 3WWMA 2OGXA 4F6TB 2BNDA 4NDQB 4USJA 2JI5A 2BNFA 4I49A 3QUNA 4JZ9A 2R98A 4NDPA 3K4YA
chains in the Genus database with same CATH topology
2BNEA 2HMFA 2J5VA 2W21A 3D40A 3LL9A 3ZZFA 2WE5A 3L86A 2X2WA 2JJXA 1OHBA 2IJ9A 1YBDA 2BMUA 3LKKA 3QUOA 3EK6A 4A7WA 2AP9A 3D41A 2WXBA 2JJ4A 3EK5A 3AAWA 4NDOB 1GS5A 3S6GA 3L76A 2OGXB 1OHAA 2J0XA 4Q1TA 3S6KA 3ZZIA 4NDPB 4NDQA 2J5TA 3QVFA 2E9YA 3NWYA 3U6UA 2AKOA 3LL5A 3K4OA 4NDRA 3ZZGA 3AB2A 4AB7A 3C20A 4JZ7A 1Z9DA 3K52A 2BRXA 2V4YA 4A7XA 4OLCA 3WWNA 2J4KA 3D2PA 3C1MA 2J4JA 2BRIA 2J0WA 4AXSA 3ZZHA 4F6TA 2BUFA 3B8GA 1B7BA 2RD5A 3C1NA 3TVIA 2WE4A 2VA1A 3S6HA 3KZFA 3T7BA 2V5HA 2CDQA 3QVHA 1GSJA 2BTYA 4NDRB 4KZTA 3AB4A 2J4LA 2R8VA 4JZ8A 1OH9A 3QURA 4NDOA 3D2MA 1E19A 2A1FA 3K56A 3WWMA 2OGXA 4F6TB 2BNDA 4NDQB 4USJA 2JI5A 2BNFA 4I49A 3QUNA 4JZ9A 2R98A 4NDPA 3K4YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BNE A;  2HMF A;  2J5V A;  2W21 A;  3D40 A;  3LL9 A;  3ZZF A;  2WE5 A;  3L86 A;  2X2W A;  2JJX A;  1OHB A;  2IJ9 A;  1YBD A;  2BMU A;  3LKK A;  3QUO A;  3EK6 A;  4A7W A;  2AP9 A;  3D41 A;  2WXB A;  2JJ4 A;  3EK5 A;  3AAW A;  4NDO B;  1GS5 A;  3S6G A;  3L76 A;  2OGX B;  1OHA A;  2J0X A;  4Q1T A;  3S6K A;  3ZZI A;  4NDP B;  4NDQ A;  2J5T A;  3QVF A;  2E9Y A;  3NWY A;  3U6U A;  2AKO A;  3LL5 A;  3K4O A;  4NDR A;  3ZZG A;  3AB2 A;  4AB7 A;  3C20 A;  4JZ7 A;  1Z9D A;  3K52 A;  2BRX A;  2V4Y A;  4A7X A;  4OLC A;  3WWN A;  2J4K A;  3D2P A;  3C1M A;  2J4J A;  2BRI A;  2J0W A;  4AXS A;  3ZZH A;  4F6T A;  2BUF A;  3B8G A;  1B7B A;  2RD5 A;  3C1N A;  3TVI A;  2WE4 A;  2VA1 A;  3S6H A;  3KZF A;  3T7B A;  2V5H A;  2CDQ A;  3QVH A;  1GSJ A;  2BTY A;  4NDR B;  4KZT A;  3AB4 A;  2J4L A;  2R8V A;  4JZ8 A;  1OH9 A;  3QUR A;  4NDO A;  3D2M A;  1E19 A;  2A1F A;  3K56 A;  3WWM A;  2OGX A;  4F6T B;  2BND A;  4NDQ B;  4USJ A;  2JI5 A;  2BNF A;  4I49 A;  3QUN A;  4JZ9 A;  2R98 A;  4NDP A;  3K4Y A; 
#chains in the Genus database with same CATH topology
 2BNE A;  2HMF A;  2J5V A;  2W21 A;  3D40 A;  3LL9 A;  3ZZF A;  2WE5 A;  3L86 A;  2X2W A;  2JJX A;  1OHB A;  2IJ9 A;  1YBD A;  2BMU A;  3LKK A;  3QUO A;  3EK6 A;  4A7W A;  2AP9 A;  3D41 A;  2WXB A;  2JJ4 A;  3EK5 A;  3AAW A;  4NDO B;  1GS5 A;  3S6G A;  3L76 A;  2OGX B;  1OHA A;  2J0X A;  4Q1T A;  3S6K A;  3ZZI A;  4NDP B;  4NDQ A;  2J5T A;  3QVF A;  2E9Y A;  3NWY A;  3U6U A;  2AKO A;  3LL5 A;  3K4O A;  4NDR A;  3ZZG A;  3AB2 A;  4AB7 A;  3C20 A;  4JZ7 A;  1Z9D A;  3K52 A;  2BRX A;  2V4Y A;  4A7X A;  4OLC A;  3WWN A;  2J4K A;  3D2P A;  3C1M A;  2J4J A;  2BRI A;  2J0W A;  4AXS A;  3ZZH A;  4F6T A;  2BUF A;  3B8G A;  1B7B A;  2RD5 A;  3C1N A;  3TVI A;  2WE4 A;  2VA1 A;  3S6H A;  3KZF A;  3T7B A;  2V5H A;  2CDQ A;  3QVH A;  1GSJ A;  2BTY A;  4NDR B;  4KZT A;  3AB4 A;  2J4L A;  2R8V A;  4JZ8 A;  1OH9 A;  3QUR A;  4NDO A;  3D2M A;  1E19 A;  2A1F A;  3K56 A;  3WWM A;  2OGX A;  4F6T B;  2BND A;  4NDQ B;  4USJ A;  2JI5 A;  2BNF A;  4I49 A;  3QUN A;  4JZ9 A;  2R98 A;  4NDP A;  3K4Y A; 
#chains in the Genus database with same CATH homology
 2BNE A;  2HMF A;  2J5V A;  2W21 A;  3D40 A;  3LL9 A;  3ZZF A;  2WE5 A;  3L86 A;  2X2W A;  2JJX A;  1OHB A;  2IJ9 A;  1YBD A;  2BMU A;  3LKK A;  3QUO A;  3EK6 A;  4A7W A;  2AP9 A;  3D41 A;  2WXB A;  2JJ4 A;  3EK5 A;  3AAW A;  4NDO B;  1GS5 A;  3S6G A;  3L76 A;  2OGX B;  1OHA A;  2J0X A;  4Q1T A;  3S6K A;  3ZZI A;  4NDP B;  4NDQ A;  2J5T A;  3QVF A;  2E9Y A;  3NWY A;  3U6U A;  2AKO A;  3LL5 A;  3K4O A;  4NDR A;  3ZZG A;  3AB2 A;  4AB7 A;  3C20 A;  4JZ7 A;  1Z9D A;  3K52 A;  2BRX A;  2V4Y A;  4A7X A;  4OLC A;  3WWN A;  2J4K A;  3D2P A;  3C1M A;  2J4J A;  2BRI A;  2J0W A;  4AXS A;  3ZZH A;  4F6T A;  2BUF A;  3B8G A;  1B7B A;  2RD5 A;  3C1N A;  3TVI A;  2WE4 A;  2VA1 A;  3S6H A;  3KZF A;  3T7B A;  2V5H A;  2CDQ A;  3QVH A;  1GSJ A;  2BTY A;  4NDR B;  4KZT A;  3AB4 A;  2J4L A;  2R8V A;  4JZ8 A;  1OH9 A;  3QUR A;  4NDO A;  3D2M A;  1E19 A;  2A1F A;  3K56 A;  3WWM A;  2OGX A;  4F6T B;  2BND A;  4NDQ B;  4USJ A;  2JI5 A;  2BNF A;  4I49 A;  3QUN A;  4JZ9 A;  2R98 A;  4NDP A;  3K4Y A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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