1OH9A

Acetylglutamate kinase from escherichia coli complexed with mgadp, n-acetyl-l-glutamate and the transition-state mimic alf4-
Total Genus 89
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
89
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
total genus 89
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1oh9A00
4F6TB 3L86A 1E19A 2X2WA 4A7XA 2AKOA 4JZ9A 2BRXA 3C20A 1GS5A 4F6TA 3K4YA 2JJ4A 2BNEA 3QURA 3K52A 3NWYA 3D2MA 2J4JA 4NDRB 2V4YA 1B7BA 3S6KA 2OGXB 2WXBA 3D2PA 3QUNA 2J5VA 3ZZHA 3LKKA 4USJA 2E9YA 2BRIA 4KZTA 3K56A 2V5HA 4NDPB 1GSJA 3ZZIA 3K4OA 1OHBA 1OH9A 3ZZGA 2R8VA 3TVIA 2BTYA 4NDQB 2BNDA 4AXSA 3D41A 4JZ7A 3B8GA 4A7WA 3AB4A 3AAWA 3S6GA 2CDQA 2R98A 4NDRA 2OGXA 2RD5A 3QVHA 4NDOB 1Z9DA 2AP9A 4JZ8A 3T7BA 2BUFA 4NDPA 2JI5A 4Q1TA 2J5TA 4OLCA 3L76A 4I49A 3EK6A 1OHAA 1YBDA 3U6UA 4AB7A 3S6HA 3KZFA 3C1NA 3LL9A 2J4LA 2IJ9A 3D40A 2J4KA 3QVFA 2BMUA 3EK5A 4NDQA 3ZZFA 2J0WA 2JJXA 3C1MA 3WWNA 2VA1A 2W21A 3WWMA 2HMFA 2WE4A 2A1FA 2WE5A 3QUOA 2J0XA 2BNFA 3AB2A 3LL5A 4NDOA
chains in the Genus database with same CATH superfamily
4F6TB 3L86A 1E19A 2X2WA 4A7XA 2AKOA 4JZ9A 2BRXA 3C20A 1GS5A 4F6TA 3K4YA 2JJ4A 2BNEA 3QURA 3K52A 3NWYA 3D2MA 2J4JA 4NDRB 2V4YA 1B7BA 3S6KA 2OGXB 2WXBA 3D2PA 3QUNA 2J5VA 3ZZHA 3LKKA 4USJA 2E9YA 2BRIA 4KZTA 3K56A 2V5HA 4NDPB 1GSJA 3ZZIA 3K4OA 1OHBA 1OH9A 3ZZGA 2R8VA 3TVIA 2BTYA 4NDQB 2BNDA 4AXSA 3D41A 4JZ7A 3B8GA 4A7WA 3AB4A 3AAWA 3S6GA 2CDQA 2R98A 4NDRA 2OGXA 2RD5A 3QVHA 4NDOB 1Z9DA 2AP9A 4JZ8A 3T7BA 2BUFA 4NDPA 2JI5A 4Q1TA 2J5TA 4OLCA 3L76A 4I49A 3EK6A 1OHAA 1YBDA 3U6UA 4AB7A 3S6HA 3KZFA 3C1NA 3LL9A 2J4LA 2IJ9A 3D40A 2J4KA 3QVFA 2BMUA 3EK5A 4NDQA 3ZZFA 2J0WA 2JJXA 3C1MA 3WWNA 2VA1A 2W21A 3WWMA 2HMFA 2WE4A 2A1FA 2WE5A 3QUOA 2J0XA 2BNFA 3AB2A 3LL5A 4NDOA
chains in the Genus database with same CATH topology
4F6TB 3L86A 1E19A 2X2WA 4A7XA 2AKOA 4JZ9A 2BRXA 3C20A 1GS5A 4F6TA 3K4YA 2JJ4A 2BNEA 3QURA 3K52A 3NWYA 3D2MA 2J4JA 4NDRB 2V4YA 1B7BA 3S6KA 2OGXB 2WXBA 3D2PA 3QUNA 2J5VA 3ZZHA 3LKKA 4USJA 2E9YA 2BRIA 4KZTA 3K56A 2V5HA 4NDPB 1GSJA 3ZZIA 3K4OA 1OHBA 1OH9A 3ZZGA 2R8VA 3TVIA 2BTYA 4NDQB 2BNDA 4AXSA 3D41A 4JZ7A 3B8GA 4A7WA 3AB4A 3AAWA 3S6GA 2CDQA 2R98A 4NDRA 2OGXA 2RD5A 3QVHA 4NDOB 1Z9DA 2AP9A 4JZ8A 3T7BA 2BUFA 4NDPA 2JI5A 4Q1TA 2J5TA 4OLCA 3L76A 4I49A 3EK6A 1OHAA 1YBDA 3U6UA 4AB7A 3S6HA 3KZFA 3C1NA 3LL9A 2J4LA 2IJ9A 3D40A 2J4KA 3QVFA 2BMUA 3EK5A 4NDQA 3ZZFA 2J0WA 2JJXA 3C1MA 3WWNA 2VA1A 2W21A 3WWMA 2HMFA 2WE4A 2A1FA 2WE5A 3QUOA 2J0XA 2BNFA 3AB2A 3LL5A 4NDOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4F6T B;  3L86 A;  1E19 A;  2X2W A;  4A7X A;  2AKO A;  4JZ9 A;  2BRX A;  3C20 A;  1GS5 A;  4F6T A;  3K4Y A;  2JJ4 A;  2BNE A;  3QUR A;  3K52 A;  3NWY A;  3D2M A;  2J4J A;  4NDR B;  2V4Y A;  1B7B A;  3S6K A;  2OGX B;  2WXB A;  3D2P A;  3QUN A;  2J5V A;  3ZZH A;  3LKK A;  4USJ A;  2E9Y A;  2BRI A;  4KZT A;  3K56 A;  2V5H A;  4NDP B;  1GSJ A;  3ZZI A;  3K4O A;  1OHB A;  1OH9 A;  3ZZG A;  2R8V A;  3TVI A;  2BTY A;  4NDQ B;  2BND A;  4AXS A;  3D41 A;  4JZ7 A;  3B8G A;  4A7W A;  3AB4 A;  3AAW A;  3S6G A;  2CDQ A;  2R98 A;  4NDR A;  2OGX A;  2RD5 A;  3QVH A;  4NDO B;  1Z9D A;  2AP9 A;  4JZ8 A;  3T7B A;  2BUF A;  4NDP A;  2JI5 A;  4Q1T A;  2J5T A;  4OLC A;  3L76 A;  4I49 A;  3EK6 A;  1OHA A;  1YBD A;  3U6U A;  4AB7 A;  3S6H A;  3KZF A;  3C1N A;  3LL9 A;  2J4L A;  2IJ9 A;  3D40 A;  2J4K A;  3QVF A;  2BMU A;  3EK5 A;  4NDQ A;  3ZZF A;  2J0W A;  2JJX A;  3C1M A;  3WWN A;  2VA1 A;  2W21 A;  3WWM A;  2HMF A;  2WE4 A;  2A1F A;  2WE5 A;  3QUO A;  2J0X A;  2BNF A;  3AB2 A;  3LL5 A;  4NDO A; 
#chains in the Genus database with same CATH topology
 4F6T B;  3L86 A;  1E19 A;  2X2W A;  4A7X A;  2AKO A;  4JZ9 A;  2BRX A;  3C20 A;  1GS5 A;  4F6T A;  3K4Y A;  2JJ4 A;  2BNE A;  3QUR A;  3K52 A;  3NWY A;  3D2M A;  2J4J A;  4NDR B;  2V4Y A;  1B7B A;  3S6K A;  2OGX B;  2WXB A;  3D2P A;  3QUN A;  2J5V A;  3ZZH A;  3LKK A;  4USJ A;  2E9Y A;  2BRI A;  4KZT A;  3K56 A;  2V5H A;  4NDP B;  1GSJ A;  3ZZI A;  3K4O A;  1OHB A;  1OH9 A;  3ZZG A;  2R8V A;  3TVI A;  2BTY A;  4NDQ B;  2BND A;  4AXS A;  3D41 A;  4JZ7 A;  3B8G A;  4A7W A;  3AB4 A;  3AAW A;  3S6G A;  2CDQ A;  2R98 A;  4NDR A;  2OGX A;  2RD5 A;  3QVH A;  4NDO B;  1Z9D A;  2AP9 A;  4JZ8 A;  3T7B A;  2BUF A;  4NDP A;  2JI5 A;  4Q1T A;  2J5T A;  4OLC A;  3L76 A;  4I49 A;  3EK6 A;  1OHA A;  1YBD A;  3U6U A;  4AB7 A;  3S6H A;  3KZF A;  3C1N A;  3LL9 A;  2J4L A;  2IJ9 A;  3D40 A;  2J4K A;  3QVF A;  2BMU A;  3EK5 A;  4NDQ A;  3ZZF A;  2J0W A;  2JJX A;  3C1M A;  3WWN A;  2VA1 A;  2W21 A;  3WWM A;  2HMF A;  2WE4 A;  2A1F A;  2WE5 A;  3QUO A;  2J0X A;  2BNF A;  3AB2 A;  3LL5 A;  4NDO A; 
#chains in the Genus database with same CATH homology
 4F6T B;  3L86 A;  1E19 A;  2X2W A;  4A7X A;  2AKO A;  4JZ9 A;  2BRX A;  3C20 A;  1GS5 A;  4F6T A;  3K4Y A;  2JJ4 A;  2BNE A;  3QUR A;  3K52 A;  3NWY A;  3D2M A;  2J4J A;  4NDR B;  2V4Y A;  1B7B A;  3S6K A;  2OGX B;  2WXB A;  3D2P A;  3QUN A;  2J5V A;  3ZZH A;  3LKK A;  4USJ A;  2E9Y A;  2BRI A;  4KZT A;  3K56 A;  2V5H A;  4NDP B;  1GSJ A;  3ZZI A;  3K4O A;  1OHB A;  1OH9 A;  3ZZG A;  2R8V A;  3TVI A;  2BTY A;  4NDQ B;  2BND A;  4AXS A;  3D41 A;  4JZ7 A;  3B8G A;  4A7W A;  3AB4 A;  3AAW A;  3S6G A;  2CDQ A;  2R98 A;  4NDR A;  2OGX A;  2RD5 A;  3QVH A;  4NDO B;  1Z9D A;  2AP9 A;  4JZ8 A;  3T7B A;  2BUF A;  4NDP A;  2JI5 A;  4Q1T A;  2J5T A;  4OLC A;  3L76 A;  4I49 A;  3EK6 A;  1OHA A;  1YBD A;  3U6U A;  4AB7 A;  3S6H A;  3KZF A;  3C1N A;  3LL9 A;  2J4L A;  2IJ9 A;  3D40 A;  2J4K A;  3QVF A;  2BMU A;  3EK5 A;  4NDQ A;  3ZZF A;  2J0W A;  2JJX A;  3C1M A;  3WWN A;  2VA1 A;  2W21 A;  3WWM A;  2HMF A;  2WE4 A;  2A1F A;  2WE5 A;  3QUO A;  2J0X A;  2BNF A;  3AB2 A;  3LL5 A;  4NDO A; 
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similar chains in the Genus database (?% sequence similarity)
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