1OH9A

Acetylglutamate kinase from escherichia coli complexed with mgadp, n-acetyl-l-glutamate and the transition-state mimic alf4-
Total Genus 89
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
89
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
total genus 89
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1oh9A00
2JI5A 4A7WA 2J5TA 2J4LA 4NDRA 4NDRB 3D40A 2OGXA 2JJXA 3ZZHA 3WWNA 2AP9A 2OGXB 3AB4A 3U6UA 3AB2A 3S6GA 3ZZGA 2RD5A 3C1MA 2CDQA 3B8GA 2WXBA 3D41A 2BNEA 3S6KA 3EK5A 2J0XA 3WWMA 1E19A 2BNFA 2BMUA 2X2WA 3LL9A 1OHAA 3C20A 2HMFA 3ZZIA 3L76A 4NDPA 3K56A 2J4JA 3LKKA 2R98A 4OLCA 1OH9A 2V4YA 4KZTA 3K4OA 3K4YA 3TVIA 2JJ4A 3D2PA 3T7BA 4NDQA 4Q1TA 1GS5A 4USJA 2BRIA 2WE4A 2BUFA 4JZ9A 2J0WA 4NDPB 2BNDA 3AAWA 3QUOA 4F6TB 4JZ7A 4F6TA 3LL5A 4AXSA 2R8VA 1GSJA 3S6HA 2W21A 2VA1A 2V5HA 3KZFA 3D2MA 4NDOB 2BTYA 1YBDA 2WE5A 3L86A 4I49A 2IJ9A 1B7BA 4NDQB 2A1FA 4A7XA 3ZZFA 2AKOA 2J5VA 2J4KA 1OHBA 3QURA 3NWYA 3K52A 3EK6A 2BRXA 3C1NA 3QVHA 4NDOA 3QUNA 2E9YA 4AB7A 3QVFA 4JZ8A 1Z9DA
chains in the Genus database with same CATH superfamily
2JI5A 4A7WA 2J5TA 2J4LA 4NDRA 4NDRB 3D40A 2OGXA 2JJXA 3ZZHA 3WWNA 2AP9A 2OGXB 3AB4A 3U6UA 3AB2A 3S6GA 3ZZGA 2RD5A 3C1MA 2CDQA 3B8GA 2WXBA 3D41A 2BNEA 3S6KA 3EK5A 2J0XA 3WWMA 1E19A 2BNFA 2BMUA 2X2WA 3LL9A 1OHAA 3C20A 2HMFA 3ZZIA 3L76A 4NDPA 3K56A 2J4JA 3LKKA 2R98A 4OLCA 1OH9A 2V4YA 4KZTA 3K4OA 3K4YA 3TVIA 2JJ4A 3D2PA 3T7BA 4NDQA 4Q1TA 1GS5A 4USJA 2BRIA 2WE4A 2BUFA 4JZ9A 2J0WA 4NDPB 2BNDA 3AAWA 3QUOA 4F6TB 4JZ7A 4F6TA 3LL5A 4AXSA 2R8VA 1GSJA 3S6HA 2W21A 2VA1A 2V5HA 3KZFA 3D2MA 4NDOB 2BTYA 1YBDA 2WE5A 3L86A 4I49A 2IJ9A 1B7BA 4NDQB 2A1FA 4A7XA 3ZZFA 2AKOA 2J5VA 2J4KA 1OHBA 3QURA 3NWYA 3K52A 3EK6A 2BRXA 3C1NA 3QVHA 4NDOA 3QUNA 2E9YA 4AB7A 3QVFA 4JZ8A 1Z9DA
chains in the Genus database with same CATH topology
2JI5A 4A7WA 2J5TA 2J4LA 4NDRA 4NDRB 3D40A 2OGXA 2JJXA 3ZZHA 3WWNA 2AP9A 2OGXB 3AB4A 3U6UA 3AB2A 3S6GA 3ZZGA 2RD5A 3C1MA 2CDQA 3B8GA 2WXBA 3D41A 2BNEA 3S6KA 3EK5A 2J0XA 3WWMA 1E19A 2BNFA 2BMUA 2X2WA 3LL9A 1OHAA 3C20A 2HMFA 3ZZIA 3L76A 4NDPA 3K56A 2J4JA 3LKKA 2R98A 4OLCA 1OH9A 2V4YA 4KZTA 3K4OA 3K4YA 3TVIA 2JJ4A 3D2PA 3T7BA 4NDQA 4Q1TA 1GS5A 4USJA 2BRIA 2WE4A 2BUFA 4JZ9A 2J0WA 4NDPB 2BNDA 3AAWA 3QUOA 4F6TB 4JZ7A 4F6TA 3LL5A 4AXSA 2R8VA 1GSJA 3S6HA 2W21A 2VA1A 2V5HA 3KZFA 3D2MA 4NDOB 2BTYA 1YBDA 2WE5A 3L86A 4I49A 2IJ9A 1B7BA 4NDQB 2A1FA 4A7XA 3ZZFA 2AKOA 2J5VA 2J4KA 1OHBA 3QURA 3NWYA 3K52A 3EK6A 2BRXA 3C1NA 3QVHA 4NDOA 3QUNA 2E9YA 4AB7A 3QVFA 4JZ8A 1Z9DA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JI5 A;  4A7W A;  2J5T A;  2J4L A;  4NDR A;  4NDR B;  3D40 A;  2OGX A;  2JJX A;  3ZZH A;  3WWN A;  2AP9 A;  2OGX B;  3AB4 A;  3U6U A;  3AB2 A;  3S6G A;  3ZZG A;  2RD5 A;  3C1M A;  2CDQ A;  3B8G A;  2WXB A;  3D41 A;  2BNE A;  3S6K A;  3EK5 A;  2J0X A;  3WWM A;  1E19 A;  2BNF A;  2BMU A;  2X2W A;  3LL9 A;  1OHA A;  3C20 A;  2HMF A;  3ZZI A;  3L76 A;  4NDP A;  3K56 A;  2J4J A;  3LKK A;  2R98 A;  4OLC A;  1OH9 A;  2V4Y A;  4KZT A;  3K4O A;  3K4Y A;  3TVI A;  2JJ4 A;  3D2P A;  3T7B A;  4NDQ A;  4Q1T A;  1GS5 A;  4USJ A;  2BRI A;  2WE4 A;  2BUF A;  4JZ9 A;  2J0W A;  4NDP B;  2BND A;  3AAW A;  3QUO A;  4F6T B;  4JZ7 A;  4F6T A;  3LL5 A;  4AXS A;  2R8V A;  1GSJ A;  3S6H A;  2W21 A;  2VA1 A;  2V5H A;  3KZF A;  3D2M A;  4NDO B;  2BTY A;  1YBD A;  2WE5 A;  3L86 A;  4I49 A;  2IJ9 A;  1B7B A;  4NDQ B;  2A1F A;  4A7X A;  3ZZF A;  2AKO A;  2J5V A;  2J4K A;  1OHB A;  3QUR A;  3NWY A;  3K52 A;  3EK6 A;  2BRX A;  3C1N A;  3QVH A;  4NDO A;  3QUN A;  2E9Y A;  4AB7 A;  3QVF A;  4JZ8 A;  1Z9D A; 
#chains in the Genus database with same CATH topology
 2JI5 A;  4A7W A;  2J5T A;  2J4L A;  4NDR A;  4NDR B;  3D40 A;  2OGX A;  2JJX A;  3ZZH A;  3WWN A;  2AP9 A;  2OGX B;  3AB4 A;  3U6U A;  3AB2 A;  3S6G A;  3ZZG A;  2RD5 A;  3C1M A;  2CDQ A;  3B8G A;  2WXB A;  3D41 A;  2BNE A;  3S6K A;  3EK5 A;  2J0X A;  3WWM A;  1E19 A;  2BNF A;  2BMU A;  2X2W A;  3LL9 A;  1OHA A;  3C20 A;  2HMF A;  3ZZI A;  3L76 A;  4NDP A;  3K56 A;  2J4J A;  3LKK A;  2R98 A;  4OLC A;  1OH9 A;  2V4Y A;  4KZT A;  3K4O A;  3K4Y A;  3TVI A;  2JJ4 A;  3D2P A;  3T7B A;  4NDQ A;  4Q1T A;  1GS5 A;  4USJ A;  2BRI A;  2WE4 A;  2BUF A;  4JZ9 A;  2J0W A;  4NDP B;  2BND A;  3AAW A;  3QUO A;  4F6T B;  4JZ7 A;  4F6T A;  3LL5 A;  4AXS A;  2R8V A;  1GSJ A;  3S6H A;  2W21 A;  2VA1 A;  2V5H A;  3KZF A;  3D2M A;  4NDO B;  2BTY A;  1YBD A;  2WE5 A;  3L86 A;  4I49 A;  2IJ9 A;  1B7B A;  4NDQ B;  2A1F A;  4A7X A;  3ZZF A;  2AKO A;  2J5V A;  2J4K A;  1OHB A;  3QUR A;  3NWY A;  3K52 A;  3EK6 A;  2BRX A;  3C1N A;  3QVH A;  4NDO A;  3QUN A;  2E9Y A;  4AB7 A;  3QVF A;  4JZ8 A;  1Z9D A; 
#chains in the Genus database with same CATH homology
 2JI5 A;  4A7W A;  2J5T A;  2J4L A;  4NDR A;  4NDR B;  3D40 A;  2OGX A;  2JJX A;  3ZZH A;  3WWN A;  2AP9 A;  2OGX B;  3AB4 A;  3U6U A;  3AB2 A;  3S6G A;  3ZZG A;  2RD5 A;  3C1M A;  2CDQ A;  3B8G A;  2WXB A;  3D41 A;  2BNE A;  3S6K A;  3EK5 A;  2J0X A;  3WWM A;  1E19 A;  2BNF A;  2BMU A;  2X2W A;  3LL9 A;  1OHA A;  3C20 A;  2HMF A;  3ZZI A;  3L76 A;  4NDP A;  3K56 A;  2J4J A;  3LKK A;  2R98 A;  4OLC A;  1OH9 A;  2V4Y A;  4KZT A;  3K4O A;  3K4Y A;  3TVI A;  2JJ4 A;  3D2P A;  3T7B A;  4NDQ A;  4Q1T A;  1GS5 A;  4USJ A;  2BRI A;  2WE4 A;  2BUF A;  4JZ9 A;  2J0W A;  4NDP B;  2BND A;  3AAW A;  3QUO A;  4F6T B;  4JZ7 A;  4F6T A;  3LL5 A;  4AXS A;  2R8V A;  1GSJ A;  3S6H A;  2W21 A;  2VA1 A;  2V5H A;  3KZF A;  3D2M A;  4NDO B;  2BTY A;  1YBD A;  2WE5 A;  3L86 A;  4I49 A;  2IJ9 A;  1B7B A;  4NDQ B;  2A1F A;  4A7X A;  3ZZF A;  2AKO A;  2J5V A;  2J4K A;  1OHB A;  3QUR A;  3NWY A;  3K52 A;  3EK6 A;  2BRX A;  3C1N A;  3QVH A;  4NDO A;  3QUN A;  2E9Y A;  4AB7 A;  3QVF A;  4JZ8 A;  1Z9D A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...