1OH9A

Acetylglutamate kinase from escherichia coli complexed with mgadp, n-acetyl-l-glutamate and the transition-state mimic alf4-
Total Genus 89
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
89
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
total genus 89
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1oh9A00
3EK6A 1OH9A 2JJ4A 3K4YA 2BNFA 2J4KA 3C1MA 2VA1A 3C20A 3LL9A 2R8VA 3D2PA 2JI5A 3L76A 3ZZHA 3T7BA 2J4JA 2J0XA 2J0WA 4NDQA 1YBDA 3B8GA 3D2MA 2BRXA 4NDPB 3LKKA 2AP9A 2OGXB 1GS5A 4KZTA 3U6UA 4F6TB 2BNEA 3C1NA 2WE5A 4Q1TA 4USJA 2V4YA 2AKOA 3QURA 3QVHA 3K52A 2OGXA 2JJXA 2RD5A 4A7XA 4F6TA 2J5TA 3NWYA 3AB2A 3D41A 1B7BA 3D40A 3L86A 2BUFA 3LL5A 1Z9DA 3WWMA 2R98A 2BTYA 2IJ9A 3K56A 4A7WA 3S6HA 3QUNA 2BMUA 4NDPA 2CDQA 4NDOA 2X2WA 4JZ9A 3EK5A 2WE4A 4NDQB 4AB7A 2J4LA 4NDOB 1E19A 4NDRB 4OLCA 3S6GA 2WXBA 4AXSA 3TVIA 2BRIA 3QVFA 3WWNA 1GSJA 3K4OA 4I49A 3ZZFA 2A1FA 1OHBA 2W21A 4NDRA 3AB4A 2V5HA 3ZZGA 4JZ8A 3ZZIA 2HMFA 3AAWA 4JZ7A 3S6KA 2BNDA 2J5VA 1OHAA 3QUOA 2E9YA 3KZFA
chains in the Genus database with same CATH superfamily
3EK6A 1OH9A 2JJ4A 3K4YA 2BNFA 2J4KA 3C1MA 2VA1A 3C20A 3LL9A 2R8VA 3D2PA 2JI5A 3L76A 3ZZHA 3T7BA 2J4JA 2J0XA 2J0WA 4NDQA 1YBDA 3B8GA 3D2MA 2BRXA 4NDPB 3LKKA 2AP9A 2OGXB 1GS5A 4KZTA 3U6UA 4F6TB 2BNEA 3C1NA 2WE5A 4Q1TA 4USJA 2V4YA 2AKOA 3QURA 3QVHA 3K52A 2OGXA 2JJXA 2RD5A 4A7XA 4F6TA 2J5TA 3NWYA 3AB2A 3D41A 1B7BA 3D40A 3L86A 2BUFA 3LL5A 1Z9DA 3WWMA 2R98A 2BTYA 2IJ9A 3K56A 4A7WA 3S6HA 3QUNA 2BMUA 4NDPA 2CDQA 4NDOA 2X2WA 4JZ9A 3EK5A 2WE4A 4NDQB 4AB7A 2J4LA 4NDOB 1E19A 4NDRB 4OLCA 3S6GA 2WXBA 4AXSA 3TVIA 2BRIA 3QVFA 3WWNA 1GSJA 3K4OA 4I49A 3ZZFA 2A1FA 1OHBA 2W21A 4NDRA 3AB4A 2V5HA 3ZZGA 4JZ8A 3ZZIA 2HMFA 3AAWA 4JZ7A 3S6KA 2BNDA 2J5VA 1OHAA 3QUOA 2E9YA 3KZFA
chains in the Genus database with same CATH topology
3EK6A 1OH9A 2JJ4A 3K4YA 2BNFA 2J4KA 3C1MA 2VA1A 3C20A 3LL9A 2R8VA 3D2PA 2JI5A 3L76A 3ZZHA 3T7BA 2J4JA 2J0XA 2J0WA 4NDQA 1YBDA 3B8GA 3D2MA 2BRXA 4NDPB 3LKKA 2AP9A 2OGXB 1GS5A 4KZTA 3U6UA 4F6TB 2BNEA 3C1NA 2WE5A 4Q1TA 4USJA 2V4YA 2AKOA 3QURA 3QVHA 3K52A 2OGXA 2JJXA 2RD5A 4A7XA 4F6TA 2J5TA 3NWYA 3AB2A 3D41A 1B7BA 3D40A 3L86A 2BUFA 3LL5A 1Z9DA 3WWMA 2R98A 2BTYA 2IJ9A 3K56A 4A7WA 3S6HA 3QUNA 2BMUA 4NDPA 2CDQA 4NDOA 2X2WA 4JZ9A 3EK5A 2WE4A 4NDQB 4AB7A 2J4LA 4NDOB 1E19A 4NDRB 4OLCA 3S6GA 2WXBA 4AXSA 3TVIA 2BRIA 3QVFA 3WWNA 1GSJA 3K4OA 4I49A 3ZZFA 2A1FA 1OHBA 2W21A 4NDRA 3AB4A 2V5HA 3ZZGA 4JZ8A 3ZZIA 2HMFA 3AAWA 4JZ7A 3S6KA 2BNDA 2J5VA 1OHAA 3QUOA 2E9YA 3KZFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3EK6 A;  1OH9 A;  2JJ4 A;  3K4Y A;  2BNF A;  2J4K A;  3C1M A;  2VA1 A;  3C20 A;  3LL9 A;  2R8V A;  3D2P A;  2JI5 A;  3L76 A;  3ZZH A;  3T7B A;  2J4J A;  2J0X A;  2J0W A;  4NDQ A;  1YBD A;  3B8G A;  3D2M A;  2BRX A;  4NDP B;  3LKK A;  2AP9 A;  2OGX B;  1GS5 A;  4KZT A;  3U6U A;  4F6T B;  2BNE A;  3C1N A;  2WE5 A;  4Q1T A;  4USJ A;  2V4Y A;  2AKO A;  3QUR A;  3QVH A;  3K52 A;  2OGX A;  2JJX A;  2RD5 A;  4A7X A;  4F6T A;  2J5T A;  3NWY A;  3AB2 A;  3D41 A;  1B7B A;  3D40 A;  3L86 A;  2BUF A;  3LL5 A;  1Z9D A;  3WWM A;  2R98 A;  2BTY A;  2IJ9 A;  3K56 A;  4A7W A;  3S6H A;  3QUN A;  2BMU A;  4NDP A;  2CDQ A;  4NDO A;  2X2W A;  4JZ9 A;  3EK5 A;  2WE4 A;  4NDQ B;  4AB7 A;  2J4L A;  4NDO B;  1E19 A;  4NDR B;  4OLC A;  3S6G A;  2WXB A;  4AXS A;  3TVI A;  2BRI A;  3QVF A;  3WWN A;  1GSJ A;  3K4O A;  4I49 A;  3ZZF A;  2A1F A;  1OHB A;  2W21 A;  4NDR A;  3AB4 A;  2V5H A;  3ZZG A;  4JZ8 A;  3ZZI A;  2HMF A;  3AAW A;  4JZ7 A;  3S6K A;  2BND A;  2J5V A;  1OHA A;  3QUO A;  2E9Y A;  3KZF A; 
#chains in the Genus database with same CATH topology
 3EK6 A;  1OH9 A;  2JJ4 A;  3K4Y A;  2BNF A;  2J4K A;  3C1M A;  2VA1 A;  3C20 A;  3LL9 A;  2R8V A;  3D2P A;  2JI5 A;  3L76 A;  3ZZH A;  3T7B A;  2J4J A;  2J0X A;  2J0W A;  4NDQ A;  1YBD A;  3B8G A;  3D2M A;  2BRX A;  4NDP B;  3LKK A;  2AP9 A;  2OGX B;  1GS5 A;  4KZT A;  3U6U A;  4F6T B;  2BNE A;  3C1N A;  2WE5 A;  4Q1T A;  4USJ A;  2V4Y A;  2AKO A;  3QUR A;  3QVH A;  3K52 A;  2OGX A;  2JJX A;  2RD5 A;  4A7X A;  4F6T A;  2J5T A;  3NWY A;  3AB2 A;  3D41 A;  1B7B A;  3D40 A;  3L86 A;  2BUF A;  3LL5 A;  1Z9D A;  3WWM A;  2R98 A;  2BTY A;  2IJ9 A;  3K56 A;  4A7W A;  3S6H A;  3QUN A;  2BMU A;  4NDP A;  2CDQ A;  4NDO A;  2X2W A;  4JZ9 A;  3EK5 A;  2WE4 A;  4NDQ B;  4AB7 A;  2J4L A;  4NDO B;  1E19 A;  4NDR B;  4OLC A;  3S6G A;  2WXB A;  4AXS A;  3TVI A;  2BRI A;  3QVF A;  3WWN A;  1GSJ A;  3K4O A;  4I49 A;  3ZZF A;  2A1F A;  1OHB A;  2W21 A;  4NDR A;  3AB4 A;  2V5H A;  3ZZG A;  4JZ8 A;  3ZZI A;  2HMF A;  3AAW A;  4JZ7 A;  3S6K A;  2BND A;  2J5V A;  1OHA A;  3QUO A;  2E9Y A;  3KZF A; 
#chains in the Genus database with same CATH homology
 3EK6 A;  1OH9 A;  2JJ4 A;  3K4Y A;  2BNF A;  2J4K A;  3C1M A;  2VA1 A;  3C20 A;  3LL9 A;  2R8V A;  3D2P A;  2JI5 A;  3L76 A;  3ZZH A;  3T7B A;  2J4J A;  2J0X A;  2J0W A;  4NDQ A;  1YBD A;  3B8G A;  3D2M A;  2BRX A;  4NDP B;  3LKK A;  2AP9 A;  2OGX B;  1GS5 A;  4KZT A;  3U6U A;  4F6T B;  2BNE A;  3C1N A;  2WE5 A;  4Q1T A;  4USJ A;  2V4Y A;  2AKO A;  3QUR A;  3QVH A;  3K52 A;  2OGX A;  2JJX A;  2RD5 A;  4A7X A;  4F6T A;  2J5T A;  3NWY A;  3AB2 A;  3D41 A;  1B7B A;  3D40 A;  3L86 A;  2BUF A;  3LL5 A;  1Z9D A;  3WWM A;  2R98 A;  2BTY A;  2IJ9 A;  3K56 A;  4A7W A;  3S6H A;  3QUN A;  2BMU A;  4NDP A;  2CDQ A;  4NDO A;  2X2W A;  4JZ9 A;  3EK5 A;  2WE4 A;  4NDQ B;  4AB7 A;  2J4L A;  4NDO B;  1E19 A;  4NDR B;  4OLC A;  3S6G A;  2WXB A;  4AXS A;  3TVI A;  2BRI A;  3QVF A;  3WWN A;  1GSJ A;  3K4O A;  4I49 A;  3ZZF A;  2A1F A;  1OHB A;  2W21 A;  4NDR A;  3AB4 A;  2V5H A;  3ZZG A;  4JZ8 A;  3ZZI A;  2HMF A;  3AAW A;  4JZ7 A;  3S6K A;  2BND A;  2J5V A;  1OHA A;  3QUO A;  2E9Y A;  3KZF A; 
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