1OH9A

Acetylglutamate kinase from escherichia coli complexed with mgadp, n-acetyl-l-glutamate and the transition-state mimic alf4-
Total Genus 89
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
89
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
total genus 89
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1oh9A00
2OGXB 3D41A 3D2PA 2J5TA 4AB7A 4NDQB 2JJ4A 3QVFA 3AB2A 3S6HA 2J0XA 3WWMA 4A7WA 4NDPB 3QURA 4I49A 2BRIA 2IJ9A 3QUOA 2BNEA 2JI5A 4A7XA 4AXSA 2R98A 2E9YA 2RD5A 3LL5A 3K4YA 2HMFA 3D40A 4JZ9A 2J4JA 3K52A 2WE4A 4NDRA 1GSJA 2BUFA 3WWNA 1OHAA 4NDOB 2X2WA 1B7BA 2A1FA 4F6TA 4KZTA 3ZZIA 3EK6A 2BMUA 2BTYA 3C1NA 3T7BA 1YBDA 1OHBA 1OH9A 2J4LA 2OGXA 2V4YA 2CDQA 4NDQA 2BRXA 2WE5A 2WXBA 2W21A 2VA1A 4OLCA 2AP9A 3KZFA 4NDPA 1E19A 2AKOA 3NWYA 3K56A 3L76A 3ZZHA 4Q1TA 3ZZGA 2BNFA 3C20A 2J0WA 1Z9DA 3C1MA 3AB4A 3EK5A 4USJA 4NDOA 3TVIA 2JJXA 3AAWA 2V5HA 3L86A 4NDRB 3QVHA 2J5VA 3LL9A 3S6KA 3LKKA 3B8GA 3K4OA 3D2MA 4F6TB 4JZ7A 3U6UA 1GS5A 2J4KA 4JZ8A 2R8VA 3S6GA 3QUNA 3ZZFA 2BNDA
chains in the Genus database with same CATH superfamily
2OGXB 3D41A 3D2PA 2J5TA 4AB7A 4NDQB 2JJ4A 3QVFA 3AB2A 3S6HA 2J0XA 3WWMA 4A7WA 4NDPB 3QURA 4I49A 2BRIA 2IJ9A 3QUOA 2BNEA 2JI5A 4A7XA 4AXSA 2R98A 2E9YA 2RD5A 3LL5A 3K4YA 2HMFA 3D40A 4JZ9A 2J4JA 3K52A 2WE4A 4NDRA 1GSJA 2BUFA 3WWNA 1OHAA 4NDOB 2X2WA 1B7BA 2A1FA 4F6TA 4KZTA 3ZZIA 3EK6A 2BMUA 2BTYA 3C1NA 3T7BA 1YBDA 1OHBA 1OH9A 2J4LA 2OGXA 2V4YA 2CDQA 4NDQA 2BRXA 2WE5A 2WXBA 2W21A 2VA1A 4OLCA 2AP9A 3KZFA 4NDPA 1E19A 2AKOA 3NWYA 3K56A 3L76A 3ZZHA 4Q1TA 3ZZGA 2BNFA 3C20A 2J0WA 1Z9DA 3C1MA 3AB4A 3EK5A 4USJA 4NDOA 3TVIA 2JJXA 3AAWA 2V5HA 3L86A 4NDRB 3QVHA 2J5VA 3LL9A 3S6KA 3LKKA 3B8GA 3K4OA 3D2MA 4F6TB 4JZ7A 3U6UA 1GS5A 2J4KA 4JZ8A 2R8VA 3S6GA 3QUNA 3ZZFA 2BNDA
chains in the Genus database with same CATH topology
2OGXB 3D41A 3D2PA 2J5TA 4AB7A 4NDQB 2JJ4A 3QVFA 3AB2A 3S6HA 2J0XA 3WWMA 4A7WA 4NDPB 3QURA 4I49A 2BRIA 2IJ9A 3QUOA 2BNEA 2JI5A 4A7XA 4AXSA 2R98A 2E9YA 2RD5A 3LL5A 3K4YA 2HMFA 3D40A 4JZ9A 2J4JA 3K52A 2WE4A 4NDRA 1GSJA 2BUFA 3WWNA 1OHAA 4NDOB 2X2WA 1B7BA 2A1FA 4F6TA 4KZTA 3ZZIA 3EK6A 2BMUA 2BTYA 3C1NA 3T7BA 1YBDA 1OHBA 1OH9A 2J4LA 2OGXA 2V4YA 2CDQA 4NDQA 2BRXA 2WE5A 2WXBA 2W21A 2VA1A 4OLCA 2AP9A 3KZFA 4NDPA 1E19A 2AKOA 3NWYA 3K56A 3L76A 3ZZHA 4Q1TA 3ZZGA 2BNFA 3C20A 2J0WA 1Z9DA 3C1MA 3AB4A 3EK5A 4USJA 4NDOA 3TVIA 2JJXA 3AAWA 2V5HA 3L86A 4NDRB 3QVHA 2J5VA 3LL9A 3S6KA 3LKKA 3B8GA 3K4OA 3D2MA 4F6TB 4JZ7A 3U6UA 1GS5A 2J4KA 4JZ8A 2R8VA 3S6GA 3QUNA 3ZZFA 2BNDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2OGX B;  3D41 A;  3D2P A;  2J5T A;  4AB7 A;  4NDQ B;  2JJ4 A;  3QVF A;  3AB2 A;  3S6H A;  2J0X A;  3WWM A;  4A7W A;  4NDP B;  3QUR A;  4I49 A;  2BRI A;  2IJ9 A;  3QUO A;  2BNE A;  2JI5 A;  4A7X A;  4AXS A;  2R98 A;  2E9Y A;  2RD5 A;  3LL5 A;  3K4Y A;  2HMF A;  3D40 A;  4JZ9 A;  2J4J A;  3K52 A;  2WE4 A;  4NDR A;  1GSJ A;  2BUF A;  3WWN A;  1OHA A;  4NDO B;  2X2W A;  1B7B A;  2A1F A;  4F6T A;  4KZT A;  3ZZI A;  3EK6 A;  2BMU A;  2BTY A;  3C1N A;  3T7B A;  1YBD A;  1OHB A;  1OH9 A;  2J4L A;  2OGX A;  2V4Y A;  2CDQ A;  4NDQ A;  2BRX A;  2WE5 A;  2WXB A;  2W21 A;  2VA1 A;  4OLC A;  2AP9 A;  3KZF A;  4NDP A;  1E19 A;  2AKO A;  3NWY A;  3K56 A;  3L76 A;  3ZZH A;  4Q1T A;  3ZZG A;  2BNF A;  3C20 A;  2J0W A;  1Z9D A;  3C1M A;  3AB4 A;  3EK5 A;  4USJ A;  4NDO A;  3TVI A;  2JJX A;  3AAW A;  2V5H A;  3L86 A;  4NDR B;  3QVH A;  2J5V A;  3LL9 A;  3S6K A;  3LKK A;  3B8G A;  3K4O A;  3D2M A;  4F6T B;  4JZ7 A;  3U6U A;  1GS5 A;  2J4K A;  4JZ8 A;  2R8V A;  3S6G A;  3QUN A;  3ZZF A;  2BND A; 
#chains in the Genus database with same CATH topology
 2OGX B;  3D41 A;  3D2P A;  2J5T A;  4AB7 A;  4NDQ B;  2JJ4 A;  3QVF A;  3AB2 A;  3S6H A;  2J0X A;  3WWM A;  4A7W A;  4NDP B;  3QUR A;  4I49 A;  2BRI A;  2IJ9 A;  3QUO A;  2BNE A;  2JI5 A;  4A7X A;  4AXS A;  2R98 A;  2E9Y A;  2RD5 A;  3LL5 A;  3K4Y A;  2HMF A;  3D40 A;  4JZ9 A;  2J4J A;  3K52 A;  2WE4 A;  4NDR A;  1GSJ A;  2BUF A;  3WWN A;  1OHA A;  4NDO B;  2X2W A;  1B7B A;  2A1F A;  4F6T A;  4KZT A;  3ZZI A;  3EK6 A;  2BMU A;  2BTY A;  3C1N A;  3T7B A;  1YBD A;  1OHB A;  1OH9 A;  2J4L A;  2OGX A;  2V4Y A;  2CDQ A;  4NDQ A;  2BRX A;  2WE5 A;  2WXB A;  2W21 A;  2VA1 A;  4OLC A;  2AP9 A;  3KZF A;  4NDP A;  1E19 A;  2AKO A;  3NWY A;  3K56 A;  3L76 A;  3ZZH A;  4Q1T A;  3ZZG A;  2BNF A;  3C20 A;  2J0W A;  1Z9D A;  3C1M A;  3AB4 A;  3EK5 A;  4USJ A;  4NDO A;  3TVI A;  2JJX A;  3AAW A;  2V5H A;  3L86 A;  4NDR B;  3QVH A;  2J5V A;  3LL9 A;  3S6K A;  3LKK A;  3B8G A;  3K4O A;  3D2M A;  4F6T B;  4JZ7 A;  3U6U A;  1GS5 A;  2J4K A;  4JZ8 A;  2R8V A;  3S6G A;  3QUN A;  3ZZF A;  2BND A; 
#chains in the Genus database with same CATH homology
 2OGX B;  3D41 A;  3D2P A;  2J5T A;  4AB7 A;  4NDQ B;  2JJ4 A;  3QVF A;  3AB2 A;  3S6H A;  2J0X A;  3WWM A;  4A7W A;  4NDP B;  3QUR A;  4I49 A;  2BRI A;  2IJ9 A;  3QUO A;  2BNE A;  2JI5 A;  4A7X A;  4AXS A;  2R98 A;  2E9Y A;  2RD5 A;  3LL5 A;  3K4Y A;  2HMF A;  3D40 A;  4JZ9 A;  2J4J A;  3K52 A;  2WE4 A;  4NDR A;  1GSJ A;  2BUF A;  3WWN A;  1OHA A;  4NDO B;  2X2W A;  1B7B A;  2A1F A;  4F6T A;  4KZT A;  3ZZI A;  3EK6 A;  2BMU A;  2BTY A;  3C1N A;  3T7B A;  1YBD A;  1OHB A;  1OH9 A;  2J4L A;  2OGX A;  2V4Y A;  2CDQ A;  4NDQ A;  2BRX A;  2WE5 A;  2WXB A;  2W21 A;  2VA1 A;  4OLC A;  2AP9 A;  3KZF A;  4NDP A;  1E19 A;  2AKO A;  3NWY A;  3K56 A;  3L76 A;  3ZZH A;  4Q1T A;  3ZZG A;  2BNF A;  3C20 A;  2J0W A;  1Z9D A;  3C1M A;  3AB4 A;  3EK5 A;  4USJ A;  4NDO A;  3TVI A;  2JJX A;  3AAW A;  2V5H A;  3L86 A;  4NDR B;  3QVH A;  2J5V A;  3LL9 A;  3S6K A;  3LKK A;  3B8G A;  3K4O A;  3D2M A;  4F6T B;  4JZ7 A;  3U6U A;  1GS5 A;  2J4K A;  4JZ8 A;  2R8V A;  3S6G A;  3QUN A;  3ZZF A;  2BND A; 
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similar chains in the Genus database (?% sequence similarity)
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