2W21A

Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia coli.
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
256
structure length
246
Chain Sequence
DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords GLUTAMATE 5-KINASE
publication title The Structure of Glutamate 5 Kinase of Escherichia Coli without Substrates
rcsb
source organism Escherichia coli
total genus 83
structure length 246
sequence length 256
ec nomenclature ec 2.7.2.11: Glutamate 5-kinase.
pdb deposition date 2008-10-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2w21A00
4USJA 2J0XA 4NDOA 1Z9DA 2JJ4A 2J5TA 3B8GA 3QURA 4NDPB 2CDQA 3QVHA 2J4JA 3D40A 2E9YA 1B7BA 2J5VA 3K56A 3NWYA 3K52A 4OLCA 2JJXA 2R98A 1GS5A 3AAWA 3ZZGA 3AB2A 2J4KA 3LKKA 3EK5A 2BNEA 3S6GA 3D41A 3LL9A 4NDQA 4NDOB 4Q1TA 3QVFA 3TVIA 2OGXA 1OHAA 2V4YA 3ZZFA 1GSJA 4KZTA 3C1NA 4NDRA 3ZZHA 2J4LA 2OGXB 2WE4A 3L86A 3U6UA 3WWMA 4A7WA 2BTYA 2WXBA 4A7XA 2WE5A 4I49A 3K4YA 3K4OA 3AB4A 1OHBA 2AKOA 3WWNA 2V5HA 2JI5A 1E19A 2A1FA 4JZ8A 3S6KA 3D2PA 2BRXA 2BMUA 2R8VA 4NDQB 3LL5A 4JZ7A 3C1MA 2BUFA 4NDPA 4NDRB 2BNDA 4AB7A 1YBDA 3T7BA 4JZ9A 2W21A 2IJ9A 2RD5A 4F6TA 3QUNA 1OH9A 3EK6A 4AXSA 2HMFA 4F6TB 2J0WA 3KZFA 2VA1A 3ZZIA 3C20A 2BRIA 2X2WA 3L76A 3QUOA 3D2MA 3S6HA 2BNFA 2AP9A
chains in the Genus database with same CATH superfamily
4USJA 2J0XA 4NDOA 1Z9DA 2JJ4A 2J5TA 3B8GA 3QURA 4NDPB 2CDQA 3QVHA 2J4JA 3D40A 2E9YA 1B7BA 2J5VA 3K56A 3NWYA 3K52A 4OLCA 2JJXA 2R98A 1GS5A 3AAWA 3ZZGA 3AB2A 2J4KA 3LKKA 3EK5A 2BNEA 3S6GA 3D41A 3LL9A 4NDQA 4NDOB 4Q1TA 3QVFA 3TVIA 2OGXA 1OHAA 2V4YA 3ZZFA 1GSJA 4KZTA 3C1NA 4NDRA 3ZZHA 2J4LA 2OGXB 2WE4A 3L86A 3U6UA 3WWMA 4A7WA 2BTYA 2WXBA 4A7XA 2WE5A 4I49A 3K4YA 3K4OA 3AB4A 1OHBA 2AKOA 3WWNA 2V5HA 2JI5A 1E19A 2A1FA 4JZ8A 3S6KA 3D2PA 2BRXA 2BMUA 2R8VA 4NDQB 3LL5A 4JZ7A 3C1MA 2BUFA 4NDPA 4NDRB 2BNDA 4AB7A 1YBDA 3T7BA 4JZ9A 2W21A 2IJ9A 2RD5A 4F6TA 3QUNA 1OH9A 3EK6A 4AXSA 2HMFA 4F6TB 2J0WA 3KZFA 2VA1A 3ZZIA 3C20A 2BRIA 2X2WA 3L76A 3QUOA 3D2MA 3S6HA 2BNFA 2AP9A
chains in the Genus database with same CATH topology
4USJA 2J0XA 4NDOA 1Z9DA 2JJ4A 2J5TA 3B8GA 3QURA 4NDPB 2CDQA 3QVHA 2J4JA 3D40A 2E9YA 1B7BA 2J5VA 3K56A 3NWYA 3K52A 4OLCA 2JJXA 2R98A 1GS5A 3AAWA 3ZZGA 3AB2A 2J4KA 3LKKA 3EK5A 2BNEA 3S6GA 3D41A 3LL9A 4NDQA 4NDOB 4Q1TA 3QVFA 3TVIA 2OGXA 1OHAA 2V4YA 3ZZFA 1GSJA 4KZTA 3C1NA 4NDRA 3ZZHA 2J4LA 2OGXB 2WE4A 3L86A 3U6UA 3WWMA 4A7WA 2BTYA 2WXBA 4A7XA 2WE5A 4I49A 3K4YA 3K4OA 3AB4A 1OHBA 2AKOA 3WWNA 2V5HA 2JI5A 1E19A 2A1FA 4JZ8A 3S6KA 3D2PA 2BRXA 2BMUA 2R8VA 4NDQB 3LL5A 4JZ7A 3C1MA 2BUFA 4NDPA 4NDRB 2BNDA 4AB7A 1YBDA 3T7BA 4JZ9A 2W21A 2IJ9A 2RD5A 4F6TA 3QUNA 1OH9A 3EK6A 4AXSA 2HMFA 4F6TB 2J0WA 3KZFA 2VA1A 3ZZIA 3C20A 2BRIA 2X2WA 3L76A 3QUOA 3D2MA 3S6HA 2BNFA 2AP9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4USJ A;  2J0X A;  4NDO A;  1Z9D A;  2JJ4 A;  2J5T A;  3B8G A;  3QUR A;  4NDP B;  2CDQ A;  3QVH A;  2J4J A;  3D40 A;  2E9Y A;  1B7B A;  2J5V A;  3K56 A;  3NWY A;  3K52 A;  4OLC A;  2JJX A;  2R98 A;  1GS5 A;  3AAW A;  3ZZG A;  3AB2 A;  2J4K A;  3LKK A;  3EK5 A;  2BNE A;  3S6G A;  3D41 A;  3LL9 A;  4NDQ A;  4NDO B;  4Q1T A;  3QVF A;  3TVI A;  2OGX A;  1OHA A;  2V4Y A;  3ZZF A;  1GSJ A;  4KZT A;  3C1N A;  4NDR A;  3ZZH A;  2J4L A;  2OGX B;  2WE4 A;  3L86 A;  3U6U A;  3WWM A;  4A7W A;  2BTY A;  2WXB A;  4A7X A;  2WE5 A;  4I49 A;  3K4Y A;  3K4O A;  3AB4 A;  1OHB A;  2AKO A;  3WWN A;  2V5H A;  2JI5 A;  1E19 A;  2A1F A;  4JZ8 A;  3S6K A;  3D2P A;  2BRX A;  2BMU A;  2R8V A;  4NDQ B;  3LL5 A;  4JZ7 A;  3C1M A;  2BUF A;  4NDP A;  4NDR B;  2BND A;  4AB7 A;  1YBD A;  3T7B A;  4JZ9 A;  2W21 A;  2IJ9 A;  2RD5 A;  4F6T A;  3QUN A;  1OH9 A;  3EK6 A;  4AXS A;  2HMF A;  4F6T B;  2J0W A;  3KZF A;  2VA1 A;  3ZZI A;  3C20 A;  2BRI A;  2X2W A;  3L76 A;  3QUO A;  3D2M A;  3S6H A;  2BNF A;  2AP9 A; 
#chains in the Genus database with same CATH topology
 4USJ A;  2J0X A;  4NDO A;  1Z9D A;  2JJ4 A;  2J5T A;  3B8G A;  3QUR A;  4NDP B;  2CDQ A;  3QVH A;  2J4J A;  3D40 A;  2E9Y A;  1B7B A;  2J5V A;  3K56 A;  3NWY A;  3K52 A;  4OLC A;  2JJX A;  2R98 A;  1GS5 A;  3AAW A;  3ZZG A;  3AB2 A;  2J4K A;  3LKK A;  3EK5 A;  2BNE A;  3S6G A;  3D41 A;  3LL9 A;  4NDQ A;  4NDO B;  4Q1T A;  3QVF A;  3TVI A;  2OGX A;  1OHA A;  2V4Y A;  3ZZF A;  1GSJ A;  4KZT A;  3C1N A;  4NDR A;  3ZZH A;  2J4L A;  2OGX B;  2WE4 A;  3L86 A;  3U6U A;  3WWM A;  4A7W A;  2BTY A;  2WXB A;  4A7X A;  2WE5 A;  4I49 A;  3K4Y A;  3K4O A;  3AB4 A;  1OHB A;  2AKO A;  3WWN A;  2V5H A;  2JI5 A;  1E19 A;  2A1F A;  4JZ8 A;  3S6K A;  3D2P A;  2BRX A;  2BMU A;  2R8V A;  4NDQ B;  3LL5 A;  4JZ7 A;  3C1M A;  2BUF A;  4NDP A;  4NDR B;  2BND A;  4AB7 A;  1YBD A;  3T7B A;  4JZ9 A;  2W21 A;  2IJ9 A;  2RD5 A;  4F6T A;  3QUN A;  1OH9 A;  3EK6 A;  4AXS A;  2HMF A;  4F6T B;  2J0W A;  3KZF A;  2VA1 A;  3ZZI A;  3C20 A;  2BRI A;  2X2W A;  3L76 A;  3QUO A;  3D2M A;  3S6H A;  2BNF A;  2AP9 A; 
#chains in the Genus database with same CATH homology
 4USJ A;  2J0X A;  4NDO A;  1Z9D A;  2JJ4 A;  2J5T A;  3B8G A;  3QUR A;  4NDP B;  2CDQ A;  3QVH A;  2J4J A;  3D40 A;  2E9Y A;  1B7B A;  2J5V A;  3K56 A;  3NWY A;  3K52 A;  4OLC A;  2JJX A;  2R98 A;  1GS5 A;  3AAW A;  3ZZG A;  3AB2 A;  2J4K A;  3LKK A;  3EK5 A;  2BNE A;  3S6G A;  3D41 A;  3LL9 A;  4NDQ A;  4NDO B;  4Q1T A;  3QVF A;  3TVI A;  2OGX A;  1OHA A;  2V4Y A;  3ZZF A;  1GSJ A;  4KZT A;  3C1N A;  4NDR A;  3ZZH A;  2J4L A;  2OGX B;  2WE4 A;  3L86 A;  3U6U A;  3WWM A;  4A7W A;  2BTY A;  2WXB A;  4A7X A;  2WE5 A;  4I49 A;  3K4Y A;  3K4O A;  3AB4 A;  1OHB A;  2AKO A;  3WWN A;  2V5H A;  2JI5 A;  1E19 A;  2A1F A;  4JZ8 A;  3S6K A;  3D2P A;  2BRX A;  2BMU A;  2R8V A;  4NDQ B;  3LL5 A;  4JZ7 A;  3C1M A;  2BUF A;  4NDP A;  4NDR B;  2BND A;  4AB7 A;  1YBD A;  3T7B A;  4JZ9 A;  2W21 A;  2IJ9 A;  2RD5 A;  4F6T A;  3QUN A;  1OH9 A;  3EK6 A;  4AXS A;  2HMF A;  4F6T B;  2J0W A;  3KZF A;  2VA1 A;  3ZZI A;  3C20 A;  2BRI A;  2X2W A;  3L76 A;  3QUO A;  3D2M A;  3S6H A;  2BNF A;  2AP9 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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