2W21A

Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia coli.
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
256
structure length
246
Chain Sequence
DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Escherichia coli
publication title The Structure of Glutamate 5 Kinase of Escherichia Coli without Substrates
rcsb
molecule keywords GLUTAMATE 5-KINASE
total genus 83
structure length 246
sequence length 256
ec nomenclature ec 2.7.2.11: Glutamate 5-kinase.
pdb deposition date 2008-10-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2w21A00
3C1MA 3QVHA 4AXSA 2WE4A 1GS5A 4NDOA 3ZZIA 3U6UA 4AB7A 4NDPB 2J0WA 3WWMA 3QVFA 2OGXA 3NWYA 3EK5A 3D2PA 4NDOB 3AB2A 3LL5A 3WWNA 4NDQA 4NDRB 2BTYA 3QURA 2OGXB 3D2MA 3LL9A 3K52A 2JJ4A 2JJXA 2J4KA 3B8GA 2VA1A 4NDQB 2AP9A 2BRXA 2A1FA 4KZTA 2J0XA 2V4YA 2J5VA 4OLCA 3QUNA 2BNEA 3KZFA 3S6HA 2J4JA 3ZZFA 2AKOA 2BNDA 3QUOA 1GSJA 4JZ7A 2BRIA 4Q1TA 2J5TA 2V5HA 2CDQA 3T7BA 3K56A 4I49A 3ZZHA 1Z9DA 3EK6A 1YBDA 2E9YA 1OH9A 1OHBA 2R8VA 3ZZGA 1B7BA 2RD5A 2X2WA 1OHAA 3K4YA 2BNFA 2R98A 3S6GA 3S6KA 4A7WA 2J4LA 2W21A 4JZ9A 1E19A 2IJ9A 2WXBA 3C1NA 2BMUA 3TVIA 2WE5A 2HMFA 4F6TA 3D41A 4USJA 3K4OA 3D40A 3AAWA 4NDRA 3C20A 3L76A 3AB4A 2JI5A 4A7XA 2BUFA 3LKKA 4NDPA 3L86A 4F6TB 4JZ8A
chains in the Genus database with same CATH superfamily
3C1MA 3QVHA 4AXSA 2WE4A 1GS5A 4NDOA 3ZZIA 3U6UA 4AB7A 4NDPB 2J0WA 3WWMA 3QVFA 2OGXA 3NWYA 3EK5A 3D2PA 4NDOB 3AB2A 3LL5A 3WWNA 4NDQA 4NDRB 2BTYA 3QURA 2OGXB 3D2MA 3LL9A 3K52A 2JJ4A 2JJXA 2J4KA 3B8GA 2VA1A 4NDQB 2AP9A 2BRXA 2A1FA 4KZTA 2J0XA 2V4YA 2J5VA 4OLCA 3QUNA 2BNEA 3KZFA 3S6HA 2J4JA 3ZZFA 2AKOA 2BNDA 3QUOA 1GSJA 4JZ7A 2BRIA 4Q1TA 2J5TA 2V5HA 2CDQA 3T7BA 3K56A 4I49A 3ZZHA 1Z9DA 3EK6A 1YBDA 2E9YA 1OH9A 1OHBA 2R8VA 3ZZGA 1B7BA 2RD5A 2X2WA 1OHAA 3K4YA 2BNFA 2R98A 3S6GA 3S6KA 4A7WA 2J4LA 2W21A 4JZ9A 1E19A 2IJ9A 2WXBA 3C1NA 2BMUA 3TVIA 2WE5A 2HMFA 4F6TA 3D41A 4USJA 3K4OA 3D40A 3AAWA 4NDRA 3C20A 3L76A 3AB4A 2JI5A 4A7XA 2BUFA 3LKKA 4NDPA 3L86A 4F6TB 4JZ8A
chains in the Genus database with same CATH topology
3C1MA 3QVHA 4AXSA 2WE4A 1GS5A 4NDOA 3ZZIA 3U6UA 4AB7A 4NDPB 2J0WA 3WWMA 3QVFA 2OGXA 3NWYA 3EK5A 3D2PA 4NDOB 3AB2A 3LL5A 3WWNA 4NDQA 4NDRB 2BTYA 3QURA 2OGXB 3D2MA 3LL9A 3K52A 2JJ4A 2JJXA 2J4KA 3B8GA 2VA1A 4NDQB 2AP9A 2BRXA 2A1FA 4KZTA 2J0XA 2V4YA 2J5VA 4OLCA 3QUNA 2BNEA 3KZFA 3S6HA 2J4JA 3ZZFA 2AKOA 2BNDA 3QUOA 1GSJA 4JZ7A 2BRIA 4Q1TA 2J5TA 2V5HA 2CDQA 3T7BA 3K56A 4I49A 3ZZHA 1Z9DA 3EK6A 1YBDA 2E9YA 1OH9A 1OHBA 2R8VA 3ZZGA 1B7BA 2RD5A 2X2WA 1OHAA 3K4YA 2BNFA 2R98A 3S6GA 3S6KA 4A7WA 2J4LA 2W21A 4JZ9A 1E19A 2IJ9A 2WXBA 3C1NA 2BMUA 3TVIA 2WE5A 2HMFA 4F6TA 3D41A 4USJA 3K4OA 3D40A 3AAWA 4NDRA 3C20A 3L76A 3AB4A 2JI5A 4A7XA 2BUFA 3LKKA 4NDPA 3L86A 4F6TB 4JZ8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3C1M A;  3QVH A;  4AXS A;  2WE4 A;  1GS5 A;  4NDO A;  3ZZI A;  3U6U A;  4AB7 A;  4NDP B;  2J0W A;  3WWM A;  3QVF A;  2OGX A;  3NWY A;  3EK5 A;  3D2P A;  4NDO B;  3AB2 A;  3LL5 A;  3WWN A;  4NDQ A;  4NDR B;  2BTY A;  3QUR A;  2OGX B;  3D2M A;  3LL9 A;  3K52 A;  2JJ4 A;  2JJX A;  2J4K A;  3B8G A;  2VA1 A;  4NDQ B;  2AP9 A;  2BRX A;  2A1F A;  4KZT A;  2J0X A;  2V4Y A;  2J5V A;  4OLC A;  3QUN A;  2BNE A;  3KZF A;  3S6H A;  2J4J A;  3ZZF A;  2AKO A;  2BND A;  3QUO A;  1GSJ A;  4JZ7 A;  2BRI A;  4Q1T A;  2J5T A;  2V5H A;  2CDQ A;  3T7B A;  3K56 A;  4I49 A;  3ZZH A;  1Z9D A;  3EK6 A;  1YBD A;  2E9Y A;  1OH9 A;  1OHB A;  2R8V A;  3ZZG A;  1B7B A;  2RD5 A;  2X2W A;  1OHA A;  3K4Y A;  2BNF A;  2R98 A;  3S6G A;  3S6K A;  4A7W A;  2J4L A;  2W21 A;  4JZ9 A;  1E19 A;  2IJ9 A;  2WXB A;  3C1N A;  2BMU A;  3TVI A;  2WE5 A;  2HMF A;  4F6T A;  3D41 A;  4USJ A;  3K4O A;  3D40 A;  3AAW A;  4NDR A;  3C20 A;  3L76 A;  3AB4 A;  2JI5 A;  4A7X A;  2BUF A;  3LKK A;  4NDP A;  3L86 A;  4F6T B;  4JZ8 A; 
#chains in the Genus database with same CATH topology
 3C1M A;  3QVH A;  4AXS A;  2WE4 A;  1GS5 A;  4NDO A;  3ZZI A;  3U6U A;  4AB7 A;  4NDP B;  2J0W A;  3WWM A;  3QVF A;  2OGX A;  3NWY A;  3EK5 A;  3D2P A;  4NDO B;  3AB2 A;  3LL5 A;  3WWN A;  4NDQ A;  4NDR B;  2BTY A;  3QUR A;  2OGX B;  3D2M A;  3LL9 A;  3K52 A;  2JJ4 A;  2JJX A;  2J4K A;  3B8G A;  2VA1 A;  4NDQ B;  2AP9 A;  2BRX A;  2A1F A;  4KZT A;  2J0X A;  2V4Y A;  2J5V A;  4OLC A;  3QUN A;  2BNE A;  3KZF A;  3S6H A;  2J4J A;  3ZZF A;  2AKO A;  2BND A;  3QUO A;  1GSJ A;  4JZ7 A;  2BRI A;  4Q1T A;  2J5T A;  2V5H A;  2CDQ A;  3T7B A;  3K56 A;  4I49 A;  3ZZH A;  1Z9D A;  3EK6 A;  1YBD A;  2E9Y A;  1OH9 A;  1OHB A;  2R8V A;  3ZZG A;  1B7B A;  2RD5 A;  2X2W A;  1OHA A;  3K4Y A;  2BNF A;  2R98 A;  3S6G A;  3S6K A;  4A7W A;  2J4L A;  2W21 A;  4JZ9 A;  1E19 A;  2IJ9 A;  2WXB A;  3C1N A;  2BMU A;  3TVI A;  2WE5 A;  2HMF A;  4F6T A;  3D41 A;  4USJ A;  3K4O A;  3D40 A;  3AAW A;  4NDR A;  3C20 A;  3L76 A;  3AB4 A;  2JI5 A;  4A7X A;  2BUF A;  3LKK A;  4NDP A;  3L86 A;  4F6T B;  4JZ8 A; 
#chains in the Genus database with same CATH homology
 3C1M A;  3QVH A;  4AXS A;  2WE4 A;  1GS5 A;  4NDO A;  3ZZI A;  3U6U A;  4AB7 A;  4NDP B;  2J0W A;  3WWM A;  3QVF A;  2OGX A;  3NWY A;  3EK5 A;  3D2P A;  4NDO B;  3AB2 A;  3LL5 A;  3WWN A;  4NDQ A;  4NDR B;  2BTY A;  3QUR A;  2OGX B;  3D2M A;  3LL9 A;  3K52 A;  2JJ4 A;  2JJX A;  2J4K A;  3B8G A;  2VA1 A;  4NDQ B;  2AP9 A;  2BRX A;  2A1F A;  4KZT A;  2J0X A;  2V4Y A;  2J5V A;  4OLC A;  3QUN A;  2BNE A;  3KZF A;  3S6H A;  2J4J A;  3ZZF A;  2AKO A;  2BND A;  3QUO A;  1GSJ A;  4JZ7 A;  2BRI A;  4Q1T A;  2J5T A;  2V5H A;  2CDQ A;  3T7B A;  3K56 A;  4I49 A;  3ZZH A;  1Z9D A;  3EK6 A;  1YBD A;  2E9Y A;  1OH9 A;  1OHB A;  2R8V A;  3ZZG A;  1B7B A;  2RD5 A;  2X2W A;  1OHA A;  3K4Y A;  2BNF A;  2R98 A;  3S6G A;  3S6K A;  4A7W A;  2J4L A;  2W21 A;  4JZ9 A;  1E19 A;  2IJ9 A;  2WXB A;  3C1N A;  2BMU A;  3TVI A;  2WE5 A;  2HMF A;  4F6T A;  3D41 A;  4USJ A;  3K4O A;  3D40 A;  3AAW A;  4NDR A;  3C20 A;  3L76 A;  3AB4 A;  2JI5 A;  4A7X A;  2BUF A;  3LKK A;  4NDP A;  3L86 A;  4F6T B;  4JZ8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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