2W21A

Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia coli.
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
256
structure length
246
Chain Sequence
b'DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQ'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords GLUTAMATE 5-KINASE
publication title The Structure of Glutamate 5 Kinase of Escherichia Coli without Substrates
rcsb
source organism Escherichia coli
molecule tags Transferase
total genus 83
structure length 246
sequence length 256
ec nomenclature ec 2.7.2.11: Glutamate 5-kinase.
pdb deposition date 2008-10-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2w21A00
3WWNA 3ZZIA 3ZZGA 2A1FA 2VA1A 2BRXA 4NDOA 2BNEA 2R8VA 4USJA 2BTYA 3AB2A 4JZ7A 1OHBA 2J4KA 2WE5A 2BNDA 2BRIA 3EK6A 1GSJA 2BMUA 1OHAA 3D2PA 3B8GA 3S6KA 3C20A 3C1NA 3QURA 3K4YA 4KZTA 3C1MA 4NDOB 2CDQA 2J4JA 2E9YA 2J0XA 3WWMA 1GS5A 2JI5A 3D40A 2J5TA 3AB4A 4AB7A 4NDQA 3ZZFA 3ZZHA 3LL9A 2HMFA 3AAWA 3TVIA 4F6TA 2JJ4A 3QUOA 2AP9A 4NDPA 3K4OA 3S6HA 4A7XA 1YBDA 3EK5A 3D41A 3LKKA 4NDRA 3QUNA 2W21A 2WE4A 1B7BA 2JJXA 2OGXA 2V4YA 4A7WA 2WXBA 3QVFA 1E19A 4F6TB 3LL5A 3D2MA 2IJ9A 2V5HA 4AXSA 3T7BA 2BNFA 4Q1TA 2J5VA 3L86A 3S6GA 3U6UA 4JZ9A 4NDRB 1Z9DA 4I49A 2AKOA 2RD5A 3NWYA 4JZ8A 2OGXB 4NDQB 2X2WA 2R98A 3L76A 2BUFA 1OH9A 3K56A 2J0WA 2J4LA 4OLCA 3KZFA 3QVHA 3K52A 4NDPB
chains in the Genus database with same CATH superfamily
3WWNA 3ZZIA 3ZZGA 2A1FA 2VA1A 2BRXA 4NDOA 2BNEA 2R8VA 4USJA 2BTYA 3AB2A 4JZ7A 1OHBA 2J4KA 2WE5A 2BNDA 2BRIA 3EK6A 1GSJA 2BMUA 1OHAA 3D2PA 3B8GA 3S6KA 3C20A 3C1NA 3QURA 3K4YA 4KZTA 3C1MA 4NDOB 2CDQA 2J4JA 2E9YA 2J0XA 3WWMA 1GS5A 2JI5A 3D40A 2J5TA 3AB4A 4AB7A 4NDQA 3ZZFA 3ZZHA 3LL9A 2HMFA 3AAWA 3TVIA 4F6TA 2JJ4A 3QUOA 2AP9A 4NDPA 3K4OA 3S6HA 4A7XA 1YBDA 3EK5A 3D41A 3LKKA 4NDRA 3QUNA 2W21A 2WE4A 1B7BA 2JJXA 2OGXA 2V4YA 4A7WA 2WXBA 3QVFA 1E19A 4F6TB 3LL5A 3D2MA 2IJ9A 2V5HA 4AXSA 3T7BA 2BNFA 4Q1TA 2J5VA 3L86A 3S6GA 3U6UA 4JZ9A 4NDRB 1Z9DA 4I49A 2AKOA 2RD5A 3NWYA 4JZ8A 2OGXB 4NDQB 2X2WA 2R98A 3L76A 2BUFA 1OH9A 3K56A 2J0WA 2J4LA 4OLCA 3KZFA 3QVHA 3K52A 4NDPB
chains in the Genus database with same CATH topology
3WWNA 3ZZIA 3ZZGA 2A1FA 2VA1A 2BRXA 4NDOA 2BNEA 2R8VA 4USJA 2BTYA 3AB2A 4JZ7A 1OHBA 2J4KA 2WE5A 2BNDA 2BRIA 3EK6A 1GSJA 2BMUA 1OHAA 3D2PA 3B8GA 3S6KA 3C20A 3C1NA 3QURA 3K4YA 4KZTA 3C1MA 4NDOB 2CDQA 2J4JA 2E9YA 2J0XA 3WWMA 1GS5A 2JI5A 3D40A 2J5TA 3AB4A 4AB7A 4NDQA 3ZZFA 3ZZHA 3LL9A 2HMFA 3AAWA 3TVIA 4F6TA 2JJ4A 3QUOA 2AP9A 4NDPA 3K4OA 3S6HA 4A7XA 1YBDA 3EK5A 3D41A 3LKKA 4NDRA 3QUNA 2W21A 2WE4A 1B7BA 2JJXA 2OGXA 2V4YA 4A7WA 2WXBA 3QVFA 1E19A 4F6TB 3LL5A 3D2MA 2IJ9A 2V5HA 4AXSA 3T7BA 2BNFA 4Q1TA 2J5VA 3L86A 3S6GA 3U6UA 4JZ9A 4NDRB 1Z9DA 4I49A 2AKOA 2RD5A 3NWYA 4JZ8A 2OGXB 4NDQB 2X2WA 2R98A 3L76A 2BUFA 1OH9A 3K56A 2J0WA 2J4LA 4OLCA 3KZFA 3QVHA 3K52A 4NDPB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3WWN A;  3ZZI A;  3ZZG A;  2A1F A;  2VA1 A;  2BRX A;  4NDO A;  2BNE A;  2R8V A;  4USJ A;  2BTY A;  3AB2 A;  4JZ7 A;  1OHB A;  2J4K A;  2WE5 A;  2BND A;  2BRI A;  3EK6 A;  1GSJ A;  2BMU A;  1OHA A;  3D2P A;  3B8G A;  3S6K A;  3C20 A;  3C1N A;  3QUR A;  3K4Y A;  4KZT A;  3C1M A;  4NDO B;  2CDQ A;  2J4J A;  2E9Y A;  2J0X A;  3WWM A;  1GS5 A;  2JI5 A;  3D40 A;  2J5T A;  3AB4 A;  4AB7 A;  4NDQ A;  3ZZF A;  3ZZH A;  3LL9 A;  2HMF A;  3AAW A;  3TVI A;  4F6T A;  2JJ4 A;  3QUO A;  2AP9 A;  4NDP A;  3K4O A;  3S6H A;  4A7X A;  1YBD A;  3EK5 A;  3D41 A;  3LKK A;  4NDR A;  3QUN A;  2W21 A;  2WE4 A;  1B7B A;  2JJX A;  2OGX A;  2V4Y A;  4A7W A;  2WXB A;  3QVF A;  1E19 A;  4F6T B;  3LL5 A;  3D2M A;  2IJ9 A;  2V5H A;  4AXS A;  3T7B A;  2BNF A;  4Q1T A;  2J5V A;  3L86 A;  3S6G A;  3U6U A;  4JZ9 A;  4NDR B;  1Z9D A;  4I49 A;  2AKO A;  2RD5 A;  3NWY A;  4JZ8 A;  2OGX B;  4NDQ B;  2X2W A;  2R98 A;  3L76 A;  2BUF A;  1OH9 A;  3K56 A;  2J0W A;  2J4L A;  4OLC A;  3KZF A;  3QVH A;  3K52 A;  4NDP B; 
#chains in the Genus database with same CATH topology
 3WWN A;  3ZZI A;  3ZZG A;  2A1F A;  2VA1 A;  2BRX A;  4NDO A;  2BNE A;  2R8V A;  4USJ A;  2BTY A;  3AB2 A;  4JZ7 A;  1OHB A;  2J4K A;  2WE5 A;  2BND A;  2BRI A;  3EK6 A;  1GSJ A;  2BMU A;  1OHA A;  3D2P A;  3B8G A;  3S6K A;  3C20 A;  3C1N A;  3QUR A;  3K4Y A;  4KZT A;  3C1M A;  4NDO B;  2CDQ A;  2J4J A;  2E9Y A;  2J0X A;  3WWM A;  1GS5 A;  2JI5 A;  3D40 A;  2J5T A;  3AB4 A;  4AB7 A;  4NDQ A;  3ZZF A;  3ZZH A;  3LL9 A;  2HMF A;  3AAW A;  3TVI A;  4F6T A;  2JJ4 A;  3QUO A;  2AP9 A;  4NDP A;  3K4O A;  3S6H A;  4A7X A;  1YBD A;  3EK5 A;  3D41 A;  3LKK A;  4NDR A;  3QUN A;  2W21 A;  2WE4 A;  1B7B A;  2JJX A;  2OGX A;  2V4Y A;  4A7W A;  2WXB A;  3QVF A;  1E19 A;  4F6T B;  3LL5 A;  3D2M A;  2IJ9 A;  2V5H A;  4AXS A;  3T7B A;  2BNF A;  4Q1T A;  2J5V A;  3L86 A;  3S6G A;  3U6U A;  4JZ9 A;  4NDR B;  1Z9D A;  4I49 A;  2AKO A;  2RD5 A;  3NWY A;  4JZ8 A;  2OGX B;  4NDQ B;  2X2W A;  2R98 A;  3L76 A;  2BUF A;  1OH9 A;  3K56 A;  2J0W A;  2J4L A;  4OLC A;  3KZF A;  3QVH A;  3K52 A;  4NDP B; 
#chains in the Genus database with same CATH homology
 3WWN A;  3ZZI A;  3ZZG A;  2A1F A;  2VA1 A;  2BRX A;  4NDO A;  2BNE A;  2R8V A;  4USJ A;  2BTY A;  3AB2 A;  4JZ7 A;  1OHB A;  2J4K A;  2WE5 A;  2BND A;  2BRI A;  3EK6 A;  1GSJ A;  2BMU A;  1OHA A;  3D2P A;  3B8G A;  3S6K A;  3C20 A;  3C1N A;  3QUR A;  3K4Y A;  4KZT A;  3C1M A;  4NDO B;  2CDQ A;  2J4J A;  2E9Y A;  2J0X A;  3WWM A;  1GS5 A;  2JI5 A;  3D40 A;  2J5T A;  3AB4 A;  4AB7 A;  4NDQ A;  3ZZF A;  3ZZH A;  3LL9 A;  2HMF A;  3AAW A;  3TVI A;  4F6T A;  2JJ4 A;  3QUO A;  2AP9 A;  4NDP A;  3K4O A;  3S6H A;  4A7X A;  1YBD A;  3EK5 A;  3D41 A;  3LKK A;  4NDR A;  3QUN A;  2W21 A;  2WE4 A;  1B7B A;  2JJX A;  2OGX A;  2V4Y A;  4A7W A;  2WXB A;  3QVF A;  1E19 A;  4F6T B;  3LL5 A;  3D2M A;  2IJ9 A;  2V5H A;  4AXS A;  3T7B A;  2BNF A;  4Q1T A;  2J5V A;  3L86 A;  3S6G A;  3U6U A;  4JZ9 A;  4NDR B;  1Z9D A;  4I49 A;  2AKO A;  2RD5 A;  3NWY A;  4JZ8 A;  2OGX B;  4NDQ B;  2X2W A;  2R98 A;  3L76 A;  2BUF A;  1OH9 A;  3K56 A;  2J0W A;  2J4L A;  4OLC A;  3KZF A;  3QVH A;  3K52 A;  4NDP B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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