2W21A

Crystal structure of the aminoacid kinase domain of the glutamate 5 kinase of escherichia coli.
Total Genus 83
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
256
structure length
246
Chain Sequence
DSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRALLDNNVVPVINENDAVATAIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords GLUTAMATE 5-KINASE
publication title The Structure of Glutamate 5 Kinase of Escherichia Coli without Substrates
rcsb
source organism Escherichia coli
molecule tags Transferase
total genus 83
structure length 246
sequence length 256
ec nomenclature ec 2.7.2.11: Glutamate 5-kinase.
pdb deposition date 2008-10-21

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2w21A00
2J4LA 4F6TB 2J4KA 3LL5A 1GSJA 3LKKA 4USJA 3S6HA 4Q1TA 2JJXA 4AB7A 2A1FA 4NDOA 2BNDA 4NDQA 3U6UA 2WXBA 2J0WA 2RD5A 3D2MA 3QUOA 3ZZIA 2V5HA 3NWYA 4NDRB 2J5TA 3QUNA 2BUFA 1OHAA 3L76A 2BNEA 4NDRA 3EK5A 2BRIA 3AB2A 2E9YA 2OGXB 2V4YA 4F6TA 3T7BA 2VA1A 3K4OA 1E19A 1Z9DA 1OH9A 4NDPB 4KZTA 3AAWA 2J0XA 3ZZGA 3ZZHA 3LL9A 3S6KA 4OLCA 2BRXA 2BNFA 1B7BA 2HMFA 3C1NA 3L86A 1GS5A 3QURA 3S6GA 3WWNA 3C1MA 2CDQA 3QVHA 3D40A 3K56A 2OGXA 4AXSA 3AB4A 2J5VA 3WWMA 3D2PA 3K4YA 4JZ8A 2BTYA 3K52A 4JZ9A 3KZFA 1OHBA 4A7WA 4NDOB 2JJ4A 2WE5A 2R8VA 4NDQB 3C20A 4NDPA 2IJ9A 3TVIA 1YBDA 3B8GA 3QVFA 3D41A 2BMUA 3ZZFA 3EK6A 2R98A 4I49A 4JZ7A 2JI5A 2W21A 2AKOA 2X2WA 2J4JA 2AP9A 2WE4A 4A7XA
chains in the Genus database with same CATH superfamily
2J4LA 4F6TB 2J4KA 3LL5A 1GSJA 3LKKA 4USJA 3S6HA 4Q1TA 2JJXA 4AB7A 2A1FA 4NDOA 2BNDA 4NDQA 3U6UA 2WXBA 2J0WA 2RD5A 3D2MA 3QUOA 3ZZIA 2V5HA 3NWYA 4NDRB 2J5TA 3QUNA 2BUFA 1OHAA 3L76A 2BNEA 4NDRA 3EK5A 2BRIA 3AB2A 2E9YA 2OGXB 2V4YA 4F6TA 3T7BA 2VA1A 3K4OA 1E19A 1Z9DA 1OH9A 4NDPB 4KZTA 3AAWA 2J0XA 3ZZGA 3ZZHA 3LL9A 3S6KA 4OLCA 2BRXA 2BNFA 1B7BA 2HMFA 3C1NA 3L86A 1GS5A 3QURA 3S6GA 3WWNA 3C1MA 2CDQA 3QVHA 3D40A 3K56A 2OGXA 4AXSA 3AB4A 2J5VA 3WWMA 3D2PA 3K4YA 4JZ8A 2BTYA 3K52A 4JZ9A 3KZFA 1OHBA 4A7WA 4NDOB 2JJ4A 2WE5A 2R8VA 4NDQB 3C20A 4NDPA 2IJ9A 3TVIA 1YBDA 3B8GA 3QVFA 3D41A 2BMUA 3ZZFA 3EK6A 2R98A 4I49A 4JZ7A 2JI5A 2W21A 2AKOA 2X2WA 2J4JA 2AP9A 2WE4A 4A7XA
chains in the Genus database with same CATH topology
2J4LA 4F6TB 2J4KA 3LL5A 1GSJA 3LKKA 4USJA 3S6HA 4Q1TA 2JJXA 4AB7A 2A1FA 4NDOA 2BNDA 4NDQA 3U6UA 2WXBA 2J0WA 2RD5A 3D2MA 3QUOA 3ZZIA 2V5HA 3NWYA 4NDRB 2J5TA 3QUNA 2BUFA 1OHAA 3L76A 2BNEA 4NDRA 3EK5A 2BRIA 3AB2A 2E9YA 2OGXB 2V4YA 4F6TA 3T7BA 2VA1A 3K4OA 1E19A 1Z9DA 1OH9A 4NDPB 4KZTA 3AAWA 2J0XA 3ZZGA 3ZZHA 3LL9A 3S6KA 4OLCA 2BRXA 2BNFA 1B7BA 2HMFA 3C1NA 3L86A 1GS5A 3QURA 3S6GA 3WWNA 3C1MA 2CDQA 3QVHA 3D40A 3K56A 2OGXA 4AXSA 3AB4A 2J5VA 3WWMA 3D2PA 3K4YA 4JZ8A 2BTYA 3K52A 4JZ9A 3KZFA 1OHBA 4A7WA 4NDOB 2JJ4A 2WE5A 2R8VA 4NDQB 3C20A 4NDPA 2IJ9A 3TVIA 1YBDA 3B8GA 3QVFA 3D41A 2BMUA 3ZZFA 3EK6A 2R98A 4I49A 4JZ7A 2JI5A 2W21A 2AKOA 2X2WA 2J4JA 2AP9A 2WE4A 4A7XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2J4L A;  4F6T B;  2J4K A;  3LL5 A;  1GSJ A;  3LKK A;  4USJ A;  3S6H A;  4Q1T A;  2JJX A;  4AB7 A;  2A1F A;  4NDO A;  2BND A;  4NDQ A;  3U6U A;  2WXB A;  2J0W A;  2RD5 A;  3D2M A;  3QUO A;  3ZZI A;  2V5H A;  3NWY A;  4NDR B;  2J5T A;  3QUN A;  2BUF A;  1OHA A;  3L76 A;  2BNE A;  4NDR A;  3EK5 A;  2BRI A;  3AB2 A;  2E9Y A;  2OGX B;  2V4Y A;  4F6T A;  3T7B A;  2VA1 A;  3K4O A;  1E19 A;  1Z9D A;  1OH9 A;  4NDP B;  4KZT A;  3AAW A;  2J0X A;  3ZZG A;  3ZZH A;  3LL9 A;  3S6K A;  4OLC A;  2BRX A;  2BNF A;  1B7B A;  2HMF A;  3C1N A;  3L86 A;  1GS5 A;  3QUR A;  3S6G A;  3WWN A;  3C1M A;  2CDQ A;  3QVH A;  3D40 A;  3K56 A;  2OGX A;  4AXS A;  3AB4 A;  2J5V A;  3WWM A;  3D2P A;  3K4Y A;  4JZ8 A;  2BTY A;  3K52 A;  4JZ9 A;  3KZF A;  1OHB A;  4A7W A;  4NDO B;  2JJ4 A;  2WE5 A;  2R8V A;  4NDQ B;  3C20 A;  4NDP A;  2IJ9 A;  3TVI A;  1YBD A;  3B8G A;  3QVF A;  3D41 A;  2BMU A;  3ZZF A;  3EK6 A;  2R98 A;  4I49 A;  4JZ7 A;  2JI5 A;  2W21 A;  2AKO A;  2X2W A;  2J4J A;  2AP9 A;  2WE4 A;  4A7X A; 
#chains in the Genus database with same CATH topology
 2J4L A;  4F6T B;  2J4K A;  3LL5 A;  1GSJ A;  3LKK A;  4USJ A;  3S6H A;  4Q1T A;  2JJX A;  4AB7 A;  2A1F A;  4NDO A;  2BND A;  4NDQ A;  3U6U A;  2WXB A;  2J0W A;  2RD5 A;  3D2M A;  3QUO A;  3ZZI A;  2V5H A;  3NWY A;  4NDR B;  2J5T A;  3QUN A;  2BUF A;  1OHA A;  3L76 A;  2BNE A;  4NDR A;  3EK5 A;  2BRI A;  3AB2 A;  2E9Y A;  2OGX B;  2V4Y A;  4F6T A;  3T7B A;  2VA1 A;  3K4O A;  1E19 A;  1Z9D A;  1OH9 A;  4NDP B;  4KZT A;  3AAW A;  2J0X A;  3ZZG A;  3ZZH A;  3LL9 A;  3S6K A;  4OLC A;  2BRX A;  2BNF A;  1B7B A;  2HMF A;  3C1N A;  3L86 A;  1GS5 A;  3QUR A;  3S6G A;  3WWN A;  3C1M A;  2CDQ A;  3QVH A;  3D40 A;  3K56 A;  2OGX A;  4AXS A;  3AB4 A;  2J5V A;  3WWM A;  3D2P A;  3K4Y A;  4JZ8 A;  2BTY A;  3K52 A;  4JZ9 A;  3KZF A;  1OHB A;  4A7W A;  4NDO B;  2JJ4 A;  2WE5 A;  2R8V A;  4NDQ B;  3C20 A;  4NDP A;  2IJ9 A;  3TVI A;  1YBD A;  3B8G A;  3QVF A;  3D41 A;  2BMU A;  3ZZF A;  3EK6 A;  2R98 A;  4I49 A;  4JZ7 A;  2JI5 A;  2W21 A;  2AKO A;  2X2W A;  2J4J A;  2AP9 A;  2WE4 A;  4A7X A; 
#chains in the Genus database with same CATH homology
 2J4L A;  4F6T B;  2J4K A;  3LL5 A;  1GSJ A;  3LKK A;  4USJ A;  3S6H A;  4Q1T A;  2JJX A;  4AB7 A;  2A1F A;  4NDO A;  2BND A;  4NDQ A;  3U6U A;  2WXB A;  2J0W A;  2RD5 A;  3D2M A;  3QUO A;  3ZZI A;  2V5H A;  3NWY A;  4NDR B;  2J5T A;  3QUN A;  2BUF A;  1OHA A;  3L76 A;  2BNE A;  4NDR A;  3EK5 A;  2BRI A;  3AB2 A;  2E9Y A;  2OGX B;  2V4Y A;  4F6T A;  3T7B A;  2VA1 A;  3K4O A;  1E19 A;  1Z9D A;  1OH9 A;  4NDP B;  4KZT A;  3AAW A;  2J0X A;  3ZZG A;  3ZZH A;  3LL9 A;  3S6K A;  4OLC A;  2BRX A;  2BNF A;  1B7B A;  2HMF A;  3C1N A;  3L86 A;  1GS5 A;  3QUR A;  3S6G A;  3WWN A;  3C1M A;  2CDQ A;  3QVH A;  3D40 A;  3K56 A;  2OGX A;  4AXS A;  3AB4 A;  2J5V A;  3WWM A;  3D2P A;  3K4Y A;  4JZ8 A;  2BTY A;  3K52 A;  4JZ9 A;  3KZF A;  1OHB A;  4A7W A;  4NDO B;  2JJ4 A;  2WE5 A;  2R8V A;  4NDQ B;  3C20 A;  4NDP A;  2IJ9 A;  3TVI A;  1YBD A;  3B8G A;  3QVF A;  3D41 A;  2BMU A;  3ZZF A;  3EK6 A;  2R98 A;  4I49 A;  4JZ7 A;  2JI5 A;  2W21 A;  2AKO A;  2X2W A;  2J4J A;  2AP9 A;  2WE4 A;  4A7X A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...