1GS5A

N-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetylglutamate and its substrate analog amppnp
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli
molecule tags Transferase
total genus 83
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2001-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gs5A00
3K56A 4F6TA 1OH9A 3K4YA 2J0WA 3LKKA 2HMFA 4NDRB 1Z9DA 2W21A 2BRXA 3U6UA 3L76A 2BNDA 2A1FA 2J4LA 2BNFA 3C20A 1OHAA 2R8VA 2X2WA 3QUNA 2V5HA 1YBDA 3L86A 2BTYA 1GSJA 3D2MA 3S6HA 3EK5A 3KZFA 1B7BA 4AXSA 3K52A 2R98A 2IJ9A 3ZZIA 2BUFA 2WXBA 2JJXA 4F6TB 2J0XA 1GS5A 3TVIA 3WWNA 3EK6A 2J4JA 4JZ7A 4Q1TA 1OHBA 3ZZFA 2AP9A 3D2PA 3S6KA 4NDOA 3QUOA 2WE5A 4JZ9A 3D40A 4NDQA 3T7BA 4NDPA 4AB7A 2OGXA 2J4KA 3WWMA 3ZZHA 3C1MA 2BMUA 3QVFA 4KZTA 4OLCA 2JJ4A 3LL9A 3ZZGA 3D41A 2E9YA 2CDQA 2BNEA 2J5TA 3S6GA 2JI5A 4NDRA 4I49A 4JZ8A 3AAWA 4NDOB 2BRIA 2WE4A 4NDQB 4A7XA 2VA1A 4NDPB 2V4YA 3AB4A 1E19A 2RD5A 3AB2A 4A7WA 2OGXB 3C1NA 2AKOA 3QVHA 2J5VA 3LL5A 3K4OA 3NWYA 3B8GA 4USJA 3QURA
chains in the Genus database with same CATH superfamily
3K56A 4F6TA 1OH9A 3K4YA 2J0WA 3LKKA 2HMFA 4NDRB 1Z9DA 2W21A 2BRXA 3U6UA 3L76A 2BNDA 2A1FA 2J4LA 2BNFA 3C20A 1OHAA 2R8VA 2X2WA 3QUNA 2V5HA 1YBDA 3L86A 2BTYA 1GSJA 3D2MA 3S6HA 3EK5A 3KZFA 1B7BA 4AXSA 3K52A 2R98A 2IJ9A 3ZZIA 2BUFA 2WXBA 2JJXA 4F6TB 2J0XA 1GS5A 3TVIA 3WWNA 3EK6A 2J4JA 4JZ7A 4Q1TA 1OHBA 3ZZFA 2AP9A 3D2PA 3S6KA 4NDOA 3QUOA 2WE5A 4JZ9A 3D40A 4NDQA 3T7BA 4NDPA 4AB7A 2OGXA 2J4KA 3WWMA 3ZZHA 3C1MA 2BMUA 3QVFA 4KZTA 4OLCA 2JJ4A 3LL9A 3ZZGA 3D41A 2E9YA 2CDQA 2BNEA 2J5TA 3S6GA 2JI5A 4NDRA 4I49A 4JZ8A 3AAWA 4NDOB 2BRIA 2WE4A 4NDQB 4A7XA 2VA1A 4NDPB 2V4YA 3AB4A 1E19A 2RD5A 3AB2A 4A7WA 2OGXB 3C1NA 2AKOA 3QVHA 2J5VA 3LL5A 3K4OA 3NWYA 3B8GA 4USJA 3QURA
chains in the Genus database with same CATH topology
3K56A 4F6TA 1OH9A 3K4YA 2J0WA 3LKKA 2HMFA 4NDRB 1Z9DA 2W21A 2BRXA 3U6UA 3L76A 2BNDA 2A1FA 2J4LA 2BNFA 3C20A 1OHAA 2R8VA 2X2WA 3QUNA 2V5HA 1YBDA 3L86A 2BTYA 1GSJA 3D2MA 3S6HA 3EK5A 3KZFA 1B7BA 4AXSA 3K52A 2R98A 2IJ9A 3ZZIA 2BUFA 2WXBA 2JJXA 4F6TB 2J0XA 1GS5A 3TVIA 3WWNA 3EK6A 2J4JA 4JZ7A 4Q1TA 1OHBA 3ZZFA 2AP9A 3D2PA 3S6KA 4NDOA 3QUOA 2WE5A 4JZ9A 3D40A 4NDQA 3T7BA 4NDPA 4AB7A 2OGXA 2J4KA 3WWMA 3ZZHA 3C1MA 2BMUA 3QVFA 4KZTA 4OLCA 2JJ4A 3LL9A 3ZZGA 3D41A 2E9YA 2CDQA 2BNEA 2J5TA 3S6GA 2JI5A 4NDRA 4I49A 4JZ8A 3AAWA 4NDOB 2BRIA 2WE4A 4NDQB 4A7XA 2VA1A 4NDPB 2V4YA 3AB4A 1E19A 2RD5A 3AB2A 4A7WA 2OGXB 3C1NA 2AKOA 3QVHA 2J5VA 3LL5A 3K4OA 3NWYA 3B8GA 4USJA 3QURA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K56 A;  4F6T A;  1OH9 A;  3K4Y A;  2J0W A;  3LKK A;  2HMF A;  4NDR B;  1Z9D A;  2W21 A;  2BRX A;  3U6U A;  3L76 A;  2BND A;  2A1F A;  2J4L A;  2BNF A;  3C20 A;  1OHA A;  2R8V A;  2X2W A;  3QUN A;  2V5H A;  1YBD A;  3L86 A;  2BTY A;  1GSJ A;  3D2M A;  3S6H A;  3EK5 A;  3KZF A;  1B7B A;  4AXS A;  3K52 A;  2R98 A;  2IJ9 A;  3ZZI A;  2BUF A;  2WXB A;  2JJX A;  4F6T B;  2J0X A;  1GS5 A;  3TVI A;  3WWN A;  3EK6 A;  2J4J A;  4JZ7 A;  4Q1T A;  1OHB A;  3ZZF A;  2AP9 A;  3D2P A;  3S6K A;  4NDO A;  3QUO A;  2WE5 A;  4JZ9 A;  3D40 A;  4NDQ A;  3T7B A;  4NDP A;  4AB7 A;  2OGX A;  2J4K A;  3WWM A;  3ZZH A;  3C1M A;  2BMU A;  3QVF A;  4KZT A;  4OLC A;  2JJ4 A;  3LL9 A;  3ZZG A;  3D41 A;  2E9Y A;  2CDQ A;  2BNE A;  2J5T A;  3S6G A;  2JI5 A;  4NDR A;  4I49 A;  4JZ8 A;  3AAW A;  4NDO B;  2BRI A;  2WE4 A;  4NDQ B;  4A7X A;  2VA1 A;  4NDP B;  2V4Y A;  3AB4 A;  1E19 A;  2RD5 A;  3AB2 A;  4A7W A;  2OGX B;  3C1N A;  2AKO A;  3QVH A;  2J5V A;  3LL5 A;  3K4O A;  3NWY A;  3B8G A;  4USJ A;  3QUR A; 
#chains in the Genus database with same CATH topology
 3K56 A;  4F6T A;  1OH9 A;  3K4Y A;  2J0W A;  3LKK A;  2HMF A;  4NDR B;  1Z9D A;  2W21 A;  2BRX A;  3U6U A;  3L76 A;  2BND A;  2A1F A;  2J4L A;  2BNF A;  3C20 A;  1OHA A;  2R8V A;  2X2W A;  3QUN A;  2V5H A;  1YBD A;  3L86 A;  2BTY A;  1GSJ A;  3D2M A;  3S6H A;  3EK5 A;  3KZF A;  1B7B A;  4AXS A;  3K52 A;  2R98 A;  2IJ9 A;  3ZZI A;  2BUF A;  2WXB A;  2JJX A;  4F6T B;  2J0X A;  1GS5 A;  3TVI A;  3WWN A;  3EK6 A;  2J4J A;  4JZ7 A;  4Q1T A;  1OHB A;  3ZZF A;  2AP9 A;  3D2P A;  3S6K A;  4NDO A;  3QUO A;  2WE5 A;  4JZ9 A;  3D40 A;  4NDQ A;  3T7B A;  4NDP A;  4AB7 A;  2OGX A;  2J4K A;  3WWM A;  3ZZH A;  3C1M A;  2BMU A;  3QVF A;  4KZT A;  4OLC A;  2JJ4 A;  3LL9 A;  3ZZG A;  3D41 A;  2E9Y A;  2CDQ A;  2BNE A;  2J5T A;  3S6G A;  2JI5 A;  4NDR A;  4I49 A;  4JZ8 A;  3AAW A;  4NDO B;  2BRI A;  2WE4 A;  4NDQ B;  4A7X A;  2VA1 A;  4NDP B;  2V4Y A;  3AB4 A;  1E19 A;  2RD5 A;  3AB2 A;  4A7W A;  2OGX B;  3C1N A;  2AKO A;  3QVH A;  2J5V A;  3LL5 A;  3K4O A;  3NWY A;  3B8G A;  4USJ A;  3QUR A; 
#chains in the Genus database with same CATH homology
 3K56 A;  4F6T A;  1OH9 A;  3K4Y A;  2J0W A;  3LKK A;  2HMF A;  4NDR B;  1Z9D A;  2W21 A;  2BRX A;  3U6U A;  3L76 A;  2BND A;  2A1F A;  2J4L A;  2BNF A;  3C20 A;  1OHA A;  2R8V A;  2X2W A;  3QUN A;  2V5H A;  1YBD A;  3L86 A;  2BTY A;  1GSJ A;  3D2M A;  3S6H A;  3EK5 A;  3KZF A;  1B7B A;  4AXS A;  3K52 A;  2R98 A;  2IJ9 A;  3ZZI A;  2BUF A;  2WXB A;  2JJX A;  4F6T B;  2J0X A;  1GS5 A;  3TVI A;  3WWN A;  3EK6 A;  2J4J A;  4JZ7 A;  4Q1T A;  1OHB A;  3ZZF A;  2AP9 A;  3D2P A;  3S6K A;  4NDO A;  3QUO A;  2WE5 A;  4JZ9 A;  3D40 A;  4NDQ A;  3T7B A;  4NDP A;  4AB7 A;  2OGX A;  2J4K A;  3WWM A;  3ZZH A;  3C1M A;  2BMU A;  3QVF A;  4KZT A;  4OLC A;  2JJ4 A;  3LL9 A;  3ZZG A;  3D41 A;  2E9Y A;  2CDQ A;  2BNE A;  2J5T A;  3S6G A;  2JI5 A;  4NDR A;  4I49 A;  4JZ8 A;  3AAW A;  4NDO B;  2BRI A;  2WE4 A;  4NDQ B;  4A7X A;  2VA1 A;  4NDP B;  2V4Y A;  3AB4 A;  1E19 A;  2RD5 A;  3AB2 A;  4A7W A;  2OGX B;  3C1N A;  2AKO A;  3QVH A;  2J5V A;  3LL5 A;  3K4O A;  3NWY A;  3B8G A;  4USJ A;  3QUR A; 
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similar chains in the Genus database (?% sequence similarity)
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