1GS5A

N-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetylglutamate and its substrate analog amppnp
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli
total genus 83
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2001-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gs5A00
2BUFA 2V5HA 2VA1A 2J4JA 2IJ9A 3D40A 2BNDA 3U6UA 3LKKA 2WE5A 3T7BA 3S6HA 3QVFA 3C20A 3S6GA 4NDRB 1OHAA 1E19A 2AP9A 1GS5A 3L86A 1Z9DA 2R8VA 1OHBA 4NDQB 3ZZIA 2J4KA 3D41A 2CDQA 1YBDA 3AB4A 3AB2A 3EK5A 4I49A 2J0XA 4KZTA 2BMUA 3S6KA 2OGXB 2BNFA 3NWYA 4JZ7A 4NDQA 1GSJA 2J5VA 4OLCA 3QVHA 2JI5A 3WWMA 4A7WA 3K4OA 4NDPB 4A7XA 3LL5A 2WE4A 2E9YA 2AKOA 3QURA 4F6TB 3ZZGA 4NDRA 2A1FA 3QUOA 4JZ9A 2J0WA 2V4YA 2BRIA 4USJA 3EK6A 4AXSA 3L76A 3D2MA 1OH9A 2OGXA 2JJXA 3K52A 3TVIA 3LL9A 4Q1TA 2BNEA 2W21A 2WXBA 2BRXA 4NDOB 3KZFA 3B8GA 3K56A 4AB7A 2JJ4A 3K4YA 2X2WA 3QUNA 4NDPA 3C1MA 2J5TA 4NDOA 3AAWA 4F6TA 3ZZFA 2R98A 3C1NA 1B7BA 4JZ8A 2J4LA 3ZZHA 3WWNA 2HMFA 3D2PA 2BTYA 2RD5A
chains in the Genus database with same CATH superfamily
2BUFA 2V5HA 2VA1A 2J4JA 2IJ9A 3D40A 2BNDA 3U6UA 3LKKA 2WE5A 3T7BA 3S6HA 3QVFA 3C20A 3S6GA 4NDRB 1OHAA 1E19A 2AP9A 1GS5A 3L86A 1Z9DA 2R8VA 1OHBA 4NDQB 3ZZIA 2J4KA 3D41A 2CDQA 1YBDA 3AB4A 3AB2A 3EK5A 4I49A 2J0XA 4KZTA 2BMUA 3S6KA 2OGXB 2BNFA 3NWYA 4JZ7A 4NDQA 1GSJA 2J5VA 4OLCA 3QVHA 2JI5A 3WWMA 4A7WA 3K4OA 4NDPB 4A7XA 3LL5A 2WE4A 2E9YA 2AKOA 3QURA 4F6TB 3ZZGA 4NDRA 2A1FA 3QUOA 4JZ9A 2J0WA 2V4YA 2BRIA 4USJA 3EK6A 4AXSA 3L76A 3D2MA 1OH9A 2OGXA 2JJXA 3K52A 3TVIA 3LL9A 4Q1TA 2BNEA 2W21A 2WXBA 2BRXA 4NDOB 3KZFA 3B8GA 3K56A 4AB7A 2JJ4A 3K4YA 2X2WA 3QUNA 4NDPA 3C1MA 2J5TA 4NDOA 3AAWA 4F6TA 3ZZFA 2R98A 3C1NA 1B7BA 4JZ8A 2J4LA 3ZZHA 3WWNA 2HMFA 3D2PA 2BTYA 2RD5A
chains in the Genus database with same CATH topology
2BUFA 2V5HA 2VA1A 2J4JA 2IJ9A 3D40A 2BNDA 3U6UA 3LKKA 2WE5A 3T7BA 3S6HA 3QVFA 3C20A 3S6GA 4NDRB 1OHAA 1E19A 2AP9A 1GS5A 3L86A 1Z9DA 2R8VA 1OHBA 4NDQB 3ZZIA 2J4KA 3D41A 2CDQA 1YBDA 3AB4A 3AB2A 3EK5A 4I49A 2J0XA 4KZTA 2BMUA 3S6KA 2OGXB 2BNFA 3NWYA 4JZ7A 4NDQA 1GSJA 2J5VA 4OLCA 3QVHA 2JI5A 3WWMA 4A7WA 3K4OA 4NDPB 4A7XA 3LL5A 2WE4A 2E9YA 2AKOA 3QURA 4F6TB 3ZZGA 4NDRA 2A1FA 3QUOA 4JZ9A 2J0WA 2V4YA 2BRIA 4USJA 3EK6A 4AXSA 3L76A 3D2MA 1OH9A 2OGXA 2JJXA 3K52A 3TVIA 3LL9A 4Q1TA 2BNEA 2W21A 2WXBA 2BRXA 4NDOB 3KZFA 3B8GA 3K56A 4AB7A 2JJ4A 3K4YA 2X2WA 3QUNA 4NDPA 3C1MA 2J5TA 4NDOA 3AAWA 4F6TA 3ZZFA 2R98A 3C1NA 1B7BA 4JZ8A 2J4LA 3ZZHA 3WWNA 2HMFA 3D2PA 2BTYA 2RD5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BUF A;  2V5H A;  2VA1 A;  2J4J A;  2IJ9 A;  3D40 A;  2BND A;  3U6U A;  3LKK A;  2WE5 A;  3T7B A;  3S6H A;  3QVF A;  3C20 A;  3S6G A;  4NDR B;  1OHA A;  1E19 A;  2AP9 A;  1GS5 A;  3L86 A;  1Z9D A;  2R8V A;  1OHB A;  4NDQ B;  3ZZI A;  2J4K A;  3D41 A;  2CDQ A;  1YBD A;  3AB4 A;  3AB2 A;  3EK5 A;  4I49 A;  2J0X A;  4KZT A;  2BMU A;  3S6K A;  2OGX B;  2BNF A;  3NWY A;  4JZ7 A;  4NDQ A;  1GSJ A;  2J5V A;  4OLC A;  3QVH A;  2JI5 A;  3WWM A;  4A7W A;  3K4O A;  4NDP B;  4A7X A;  3LL5 A;  2WE4 A;  2E9Y A;  2AKO A;  3QUR A;  4F6T B;  3ZZG A;  4NDR A;  2A1F A;  3QUO A;  4JZ9 A;  2J0W A;  2V4Y A;  2BRI A;  4USJ A;  3EK6 A;  4AXS A;  3L76 A;  3D2M A;  1OH9 A;  2OGX A;  2JJX A;  3K52 A;  3TVI A;  3LL9 A;  4Q1T A;  2BNE A;  2W21 A;  2WXB A;  2BRX A;  4NDO B;  3KZF A;  3B8G A;  3K56 A;  4AB7 A;  2JJ4 A;  3K4Y A;  2X2W A;  3QUN A;  4NDP A;  3C1M A;  2J5T A;  4NDO A;  3AAW A;  4F6T A;  3ZZF A;  2R98 A;  3C1N A;  1B7B A;  4JZ8 A;  2J4L A;  3ZZH A;  3WWN A;  2HMF A;  3D2P A;  2BTY A;  2RD5 A; 
#chains in the Genus database with same CATH topology
 2BUF A;  2V5H A;  2VA1 A;  2J4J A;  2IJ9 A;  3D40 A;  2BND A;  3U6U A;  3LKK A;  2WE5 A;  3T7B A;  3S6H A;  3QVF A;  3C20 A;  3S6G A;  4NDR B;  1OHA A;  1E19 A;  2AP9 A;  1GS5 A;  3L86 A;  1Z9D A;  2R8V A;  1OHB A;  4NDQ B;  3ZZI A;  2J4K A;  3D41 A;  2CDQ A;  1YBD A;  3AB4 A;  3AB2 A;  3EK5 A;  4I49 A;  2J0X A;  4KZT A;  2BMU A;  3S6K A;  2OGX B;  2BNF A;  3NWY A;  4JZ7 A;  4NDQ A;  1GSJ A;  2J5V A;  4OLC A;  3QVH A;  2JI5 A;  3WWM A;  4A7W A;  3K4O A;  4NDP B;  4A7X A;  3LL5 A;  2WE4 A;  2E9Y A;  2AKO A;  3QUR A;  4F6T B;  3ZZG A;  4NDR A;  2A1F A;  3QUO A;  4JZ9 A;  2J0W A;  2V4Y A;  2BRI A;  4USJ A;  3EK6 A;  4AXS A;  3L76 A;  3D2M A;  1OH9 A;  2OGX A;  2JJX A;  3K52 A;  3TVI A;  3LL9 A;  4Q1T A;  2BNE A;  2W21 A;  2WXB A;  2BRX A;  4NDO B;  3KZF A;  3B8G A;  3K56 A;  4AB7 A;  2JJ4 A;  3K4Y A;  2X2W A;  3QUN A;  4NDP A;  3C1M A;  2J5T A;  4NDO A;  3AAW A;  4F6T A;  3ZZF A;  2R98 A;  3C1N A;  1B7B A;  4JZ8 A;  2J4L A;  3ZZH A;  3WWN A;  2HMF A;  3D2P A;  2BTY A;  2RD5 A; 
#chains in the Genus database with same CATH homology
 2BUF A;  2V5H A;  2VA1 A;  2J4J A;  2IJ9 A;  3D40 A;  2BND A;  3U6U A;  3LKK A;  2WE5 A;  3T7B A;  3S6H A;  3QVF A;  3C20 A;  3S6G A;  4NDR B;  1OHA A;  1E19 A;  2AP9 A;  1GS5 A;  3L86 A;  1Z9D A;  2R8V A;  1OHB A;  4NDQ B;  3ZZI A;  2J4K A;  3D41 A;  2CDQ A;  1YBD A;  3AB4 A;  3AB2 A;  3EK5 A;  4I49 A;  2J0X A;  4KZT A;  2BMU A;  3S6K A;  2OGX B;  2BNF A;  3NWY A;  4JZ7 A;  4NDQ A;  1GSJ A;  2J5V A;  4OLC A;  3QVH A;  2JI5 A;  3WWM A;  4A7W A;  3K4O A;  4NDP B;  4A7X A;  3LL5 A;  2WE4 A;  2E9Y A;  2AKO A;  3QUR A;  4F6T B;  3ZZG A;  4NDR A;  2A1F A;  3QUO A;  4JZ9 A;  2J0W A;  2V4Y A;  2BRI A;  4USJ A;  3EK6 A;  4AXS A;  3L76 A;  3D2M A;  1OH9 A;  2OGX A;  2JJX A;  3K52 A;  3TVI A;  3LL9 A;  4Q1T A;  2BNE A;  2W21 A;  2WXB A;  2BRX A;  4NDO B;  3KZF A;  3B8G A;  3K56 A;  4AB7 A;  2JJ4 A;  3K4Y A;  2X2W A;  3QUN A;  4NDP A;  3C1M A;  2J5T A;  4NDO A;  3AAW A;  4F6T A;  3ZZF A;  2R98 A;  3C1N A;  1B7B A;  4JZ8 A;  2J4L A;  3ZZH A;  3WWN A;  2HMF A;  3D2P A;  2BTY A;  2RD5 A; 
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similar chains in the Genus database (?% sequence similarity)
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