1GS5A

N-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetylglutamate and its substrate analog amppnp
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli
molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
total genus 83
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2001-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gs5A00
1Z9DA 3ZZHA 2BMUA 2OGXA 3AB2A 3QVHA 1GS5A 4JZ9A 2BRXA 1E19A 2WE5A 4F6TA 4USJA 1OHAA 2OGXB 3D2MA 4NDRA 3WWNA 2J5VA 4KZTA 4AB7A 3LL5A 1OH9A 3K52A 3B8GA 4F6TB 2HMFA 3WWMA 3QUNA 3L76A 3T7BA 4NDRB 3C1MA 3S6KA 4NDOB 4NDQA 4NDPA 2X2WA 3NWYA 2J5TA 2BNEA 3EK6A 2JJXA 2BUFA 3K4OA 3QUOA 4NDOA 4NDQB 2WE4A 2JJ4A 2CDQA 2V5HA 2A1FA 2AKOA 3K56A 2AP9A 2R8VA 1B7BA 3LL9A 3ZZIA 3EK5A 2BNDA 3S6HA 2E9YA 2J0WA 1YBDA 4Q1TA 3LKKA 3L86A 2JI5A 3C20A 2W21A 2J0XA 2VA1A 1OHBA 3C1NA 4OLCA 4A7WA 2V4YA 2WXBA 2J4LA 3TVIA 3QURA 4JZ7A 2IJ9A 3U6UA 4AXSA 2BNFA 3ZZFA 2J4JA 2BTYA 3D40A 2J4KA 2BRIA 3QVFA 3K4YA 2R98A 4I49A 3D41A 1GSJA 4A7XA 3AAWA 3KZFA 3S6GA 3ZZGA 4NDPB 3D2PA 2RD5A 4JZ8A 3AB4A
chains in the Genus database with same CATH superfamily
1Z9DA 3ZZHA 2BMUA 2OGXA 3AB2A 3QVHA 1GS5A 4JZ9A 2BRXA 1E19A 2WE5A 4F6TA 4USJA 1OHAA 2OGXB 3D2MA 4NDRA 3WWNA 2J5VA 4KZTA 4AB7A 3LL5A 1OH9A 3K52A 3B8GA 4F6TB 2HMFA 3WWMA 3QUNA 3L76A 3T7BA 4NDRB 3C1MA 3S6KA 4NDOB 4NDQA 4NDPA 2X2WA 3NWYA 2J5TA 2BNEA 3EK6A 2JJXA 2BUFA 3K4OA 3QUOA 4NDOA 4NDQB 2WE4A 2JJ4A 2CDQA 2V5HA 2A1FA 2AKOA 3K56A 2AP9A 2R8VA 1B7BA 3LL9A 3ZZIA 3EK5A 2BNDA 3S6HA 2E9YA 2J0WA 1YBDA 4Q1TA 3LKKA 3L86A 2JI5A 3C20A 2W21A 2J0XA 2VA1A 1OHBA 3C1NA 4OLCA 4A7WA 2V4YA 2WXBA 2J4LA 3TVIA 3QURA 4JZ7A 2IJ9A 3U6UA 4AXSA 2BNFA 3ZZFA 2J4JA 2BTYA 3D40A 2J4KA 2BRIA 3QVFA 3K4YA 2R98A 4I49A 3D41A 1GSJA 4A7XA 3AAWA 3KZFA 3S6GA 3ZZGA 4NDPB 3D2PA 2RD5A 4JZ8A 3AB4A
chains in the Genus database with same CATH topology
1Z9DA 3ZZHA 2BMUA 2OGXA 3AB2A 3QVHA 1GS5A 4JZ9A 2BRXA 1E19A 2WE5A 4F6TA 4USJA 1OHAA 2OGXB 3D2MA 4NDRA 3WWNA 2J5VA 4KZTA 4AB7A 3LL5A 1OH9A 3K52A 3B8GA 4F6TB 2HMFA 3WWMA 3QUNA 3L76A 3T7BA 4NDRB 3C1MA 3S6KA 4NDOB 4NDQA 4NDPA 2X2WA 3NWYA 2J5TA 2BNEA 3EK6A 2JJXA 2BUFA 3K4OA 3QUOA 4NDOA 4NDQB 2WE4A 2JJ4A 2CDQA 2V5HA 2A1FA 2AKOA 3K56A 2AP9A 2R8VA 1B7BA 3LL9A 3ZZIA 3EK5A 2BNDA 3S6HA 2E9YA 2J0WA 1YBDA 4Q1TA 3LKKA 3L86A 2JI5A 3C20A 2W21A 2J0XA 2VA1A 1OHBA 3C1NA 4OLCA 4A7WA 2V4YA 2WXBA 2J4LA 3TVIA 3QURA 4JZ7A 2IJ9A 3U6UA 4AXSA 2BNFA 3ZZFA 2J4JA 2BTYA 3D40A 2J4KA 2BRIA 3QVFA 3K4YA 2R98A 4I49A 3D41A 1GSJA 4A7XA 3AAWA 3KZFA 3S6GA 3ZZGA 4NDPB 3D2PA 2RD5A 4JZ8A 3AB4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Z9D A;  3ZZH A;  2BMU A;  2OGX A;  3AB2 A;  3QVH A;  1GS5 A;  4JZ9 A;  2BRX A;  1E19 A;  2WE5 A;  4F6T A;  4USJ A;  1OHA A;  2OGX B;  3D2M A;  4NDR A;  3WWN A;  2J5V A;  4KZT A;  4AB7 A;  3LL5 A;  1OH9 A;  3K52 A;  3B8G A;  4F6T B;  2HMF A;  3WWM A;  3QUN A;  3L76 A;  3T7B A;  4NDR B;  3C1M A;  3S6K A;  4NDO B;  4NDQ A;  4NDP A;  2X2W A;  3NWY A;  2J5T A;  2BNE A;  3EK6 A;  2JJX A;  2BUF A;  3K4O A;  3QUO A;  4NDO A;  4NDQ B;  2WE4 A;  2JJ4 A;  2CDQ A;  2V5H A;  2A1F A;  2AKO A;  3K56 A;  2AP9 A;  2R8V A;  1B7B A;  3LL9 A;  3ZZI A;  3EK5 A;  2BND A;  3S6H A;  2E9Y A;  2J0W A;  1YBD A;  4Q1T A;  3LKK A;  3L86 A;  2JI5 A;  3C20 A;  2W21 A;  2J0X A;  2VA1 A;  1OHB A;  3C1N A;  4OLC A;  4A7W A;  2V4Y A;  2WXB A;  2J4L A;  3TVI A;  3QUR A;  4JZ7 A;  2IJ9 A;  3U6U A;  4AXS A;  2BNF A;  3ZZF A;  2J4J A;  2BTY A;  3D40 A;  2J4K A;  2BRI A;  3QVF A;  3K4Y A;  2R98 A;  4I49 A;  3D41 A;  1GSJ A;  4A7X A;  3AAW A;  3KZF A;  3S6G A;  3ZZG A;  4NDP B;  3D2P A;  2RD5 A;  4JZ8 A;  3AB4 A; 
#chains in the Genus database with same CATH topology
 1Z9D A;  3ZZH A;  2BMU A;  2OGX A;  3AB2 A;  3QVH A;  1GS5 A;  4JZ9 A;  2BRX A;  1E19 A;  2WE5 A;  4F6T A;  4USJ A;  1OHA A;  2OGX B;  3D2M A;  4NDR A;  3WWN A;  2J5V A;  4KZT A;  4AB7 A;  3LL5 A;  1OH9 A;  3K52 A;  3B8G A;  4F6T B;  2HMF A;  3WWM A;  3QUN A;  3L76 A;  3T7B A;  4NDR B;  3C1M A;  3S6K A;  4NDO B;  4NDQ A;  4NDP A;  2X2W A;  3NWY A;  2J5T A;  2BNE A;  3EK6 A;  2JJX A;  2BUF A;  3K4O A;  3QUO A;  4NDO A;  4NDQ B;  2WE4 A;  2JJ4 A;  2CDQ A;  2V5H A;  2A1F A;  2AKO A;  3K56 A;  2AP9 A;  2R8V A;  1B7B A;  3LL9 A;  3ZZI A;  3EK5 A;  2BND A;  3S6H A;  2E9Y A;  2J0W A;  1YBD A;  4Q1T A;  3LKK A;  3L86 A;  2JI5 A;  3C20 A;  2W21 A;  2J0X A;  2VA1 A;  1OHB A;  3C1N A;  4OLC A;  4A7W A;  2V4Y A;  2WXB A;  2J4L A;  3TVI A;  3QUR A;  4JZ7 A;  2IJ9 A;  3U6U A;  4AXS A;  2BNF A;  3ZZF A;  2J4J A;  2BTY A;  3D40 A;  2J4K A;  2BRI A;  3QVF A;  3K4Y A;  2R98 A;  4I49 A;  3D41 A;  1GSJ A;  4A7X A;  3AAW A;  3KZF A;  3S6G A;  3ZZG A;  4NDP B;  3D2P A;  2RD5 A;  4JZ8 A;  3AB4 A; 
#chains in the Genus database with same CATH homology
 1Z9D A;  3ZZH A;  2BMU A;  2OGX A;  3AB2 A;  3QVH A;  1GS5 A;  4JZ9 A;  2BRX A;  1E19 A;  2WE5 A;  4F6T A;  4USJ A;  1OHA A;  2OGX B;  3D2M A;  4NDR A;  3WWN A;  2J5V A;  4KZT A;  4AB7 A;  3LL5 A;  1OH9 A;  3K52 A;  3B8G A;  4F6T B;  2HMF A;  3WWM A;  3QUN A;  3L76 A;  3T7B A;  4NDR B;  3C1M A;  3S6K A;  4NDO B;  4NDQ A;  4NDP A;  2X2W A;  3NWY A;  2J5T A;  2BNE A;  3EK6 A;  2JJX A;  2BUF A;  3K4O A;  3QUO A;  4NDO A;  4NDQ B;  2WE4 A;  2JJ4 A;  2CDQ A;  2V5H A;  2A1F A;  2AKO A;  3K56 A;  2AP9 A;  2R8V A;  1B7B A;  3LL9 A;  3ZZI A;  3EK5 A;  2BND A;  3S6H A;  2E9Y A;  2J0W A;  1YBD A;  4Q1T A;  3LKK A;  3L86 A;  2JI5 A;  3C20 A;  2W21 A;  2J0X A;  2VA1 A;  1OHB A;  3C1N A;  4OLC A;  4A7W A;  2V4Y A;  2WXB A;  2J4L A;  3TVI A;  3QUR A;  4JZ7 A;  2IJ9 A;  3U6U A;  4AXS A;  2BNF A;  3ZZF A;  2J4J A;  2BTY A;  3D40 A;  2J4K A;  2BRI A;  3QVF A;  3K4Y A;  2R98 A;  4I49 A;  3D41 A;  1GSJ A;  4A7X A;  3AAW A;  3KZF A;  3S6G A;  3ZZG A;  4NDP B;  3D2P A;  2RD5 A;  4JZ8 A;  3AB4 A; 
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