1GS5A

N-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetylglutamate and its substrate analog amppnp
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli
molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
total genus 83
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2001-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gs5A00
2V5HA 2BNDA 3D40A 2R98A 1GS5A 2J5TA 2J4KA 2W21A 4JZ9A 2RD5A 3QVFA 2E9YA 3QVHA 3LL5A 3WWNA 2J5VA 3ZZGA 2HMFA 3QURA 4F6TA 3L76A 4AXSA 2J0XA 2J0WA 2JJ4A 3C1MA 2V4YA 3K4YA 3LKKA 1E19A 4OLCA 2CDQA 3EK5A 4NDPA 4NDQA 4NDRB 3D2PA 2BNEA 1GSJA 2BMUA 2J4LA 4USJA 2R8VA 3ZZFA 4NDPB 3AB2A 4I49A 2A1FA 1OHBA 1Z9DA 2X2WA 3LL9A 3AAWA 3K4OA 2OGXB 3L86A 3C1NA 2BRIA 3S6KA 4A7XA 2WE5A 4F6TB 2BUFA 2BRXA 4NDRA 4JZ7A 3TVIA 4Q1TA 2BNFA 1B7BA 3ZZIA 3K56A 4NDQB 3D41A 3C20A 3K52A 1OH9A 1OHAA 3QUOA 3EK6A 3D2MA 4KZTA 3NWYA 3U6UA 2OGXA 2J4JA 4A7WA 4NDOB 3WWMA 4NDOA 2JJXA 2WXBA 3S6GA 3B8GA 3S6HA 2VA1A 3QUNA 2IJ9A 2WE4A 4JZ8A 3T7BA 2JI5A 3AB4A 4AB7A 3KZFA 2AP9A 2AKOA 1YBDA 2BTYA 3ZZHA
chains in the Genus database with same CATH superfamily
2V5HA 2BNDA 3D40A 2R98A 1GS5A 2J5TA 2J4KA 2W21A 4JZ9A 2RD5A 3QVFA 2E9YA 3QVHA 3LL5A 3WWNA 2J5VA 3ZZGA 2HMFA 3QURA 4F6TA 3L76A 4AXSA 2J0XA 2J0WA 2JJ4A 3C1MA 2V4YA 3K4YA 3LKKA 1E19A 4OLCA 2CDQA 3EK5A 4NDPA 4NDQA 4NDRB 3D2PA 2BNEA 1GSJA 2BMUA 2J4LA 4USJA 2R8VA 3ZZFA 4NDPB 3AB2A 4I49A 2A1FA 1OHBA 1Z9DA 2X2WA 3LL9A 3AAWA 3K4OA 2OGXB 3L86A 3C1NA 2BRIA 3S6KA 4A7XA 2WE5A 4F6TB 2BUFA 2BRXA 4NDRA 4JZ7A 3TVIA 4Q1TA 2BNFA 1B7BA 3ZZIA 3K56A 4NDQB 3D41A 3C20A 3K52A 1OH9A 1OHAA 3QUOA 3EK6A 3D2MA 4KZTA 3NWYA 3U6UA 2OGXA 2J4JA 4A7WA 4NDOB 3WWMA 4NDOA 2JJXA 2WXBA 3S6GA 3B8GA 3S6HA 2VA1A 3QUNA 2IJ9A 2WE4A 4JZ8A 3T7BA 2JI5A 3AB4A 4AB7A 3KZFA 2AP9A 2AKOA 1YBDA 2BTYA 3ZZHA
chains in the Genus database with same CATH topology
2V5HA 2BNDA 3D40A 2R98A 1GS5A 2J5TA 2J4KA 2W21A 4JZ9A 2RD5A 3QVFA 2E9YA 3QVHA 3LL5A 3WWNA 2J5VA 3ZZGA 2HMFA 3QURA 4F6TA 3L76A 4AXSA 2J0XA 2J0WA 2JJ4A 3C1MA 2V4YA 3K4YA 3LKKA 1E19A 4OLCA 2CDQA 3EK5A 4NDPA 4NDQA 4NDRB 3D2PA 2BNEA 1GSJA 2BMUA 2J4LA 4USJA 2R8VA 3ZZFA 4NDPB 3AB2A 4I49A 2A1FA 1OHBA 1Z9DA 2X2WA 3LL9A 3AAWA 3K4OA 2OGXB 3L86A 3C1NA 2BRIA 3S6KA 4A7XA 2WE5A 4F6TB 2BUFA 2BRXA 4NDRA 4JZ7A 3TVIA 4Q1TA 2BNFA 1B7BA 3ZZIA 3K56A 4NDQB 3D41A 3C20A 3K52A 1OH9A 1OHAA 3QUOA 3EK6A 3D2MA 4KZTA 3NWYA 3U6UA 2OGXA 2J4JA 4A7WA 4NDOB 3WWMA 4NDOA 2JJXA 2WXBA 3S6GA 3B8GA 3S6HA 2VA1A 3QUNA 2IJ9A 2WE4A 4JZ8A 3T7BA 2JI5A 3AB4A 4AB7A 3KZFA 2AP9A 2AKOA 1YBDA 2BTYA 3ZZHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2V5H A;  2BND A;  3D40 A;  2R98 A;  1GS5 A;  2J5T A;  2J4K A;  2W21 A;  4JZ9 A;  2RD5 A;  3QVF A;  2E9Y A;  3QVH A;  3LL5 A;  3WWN A;  2J5V A;  3ZZG A;  2HMF A;  3QUR A;  4F6T A;  3L76 A;  4AXS A;  2J0X A;  2J0W A;  2JJ4 A;  3C1M A;  2V4Y A;  3K4Y A;  3LKK A;  1E19 A;  4OLC A;  2CDQ A;  3EK5 A;  4NDP A;  4NDQ A;  4NDR B;  3D2P A;  2BNE A;  1GSJ A;  2BMU A;  2J4L A;  4USJ A;  2R8V A;  3ZZF A;  4NDP B;  3AB2 A;  4I49 A;  2A1F A;  1OHB A;  1Z9D A;  2X2W A;  3LL9 A;  3AAW A;  3K4O A;  2OGX B;  3L86 A;  3C1N A;  2BRI A;  3S6K A;  4A7X A;  2WE5 A;  4F6T B;  2BUF A;  2BRX A;  4NDR A;  4JZ7 A;  3TVI A;  4Q1T A;  2BNF A;  1B7B A;  3ZZI A;  3K56 A;  4NDQ B;  3D41 A;  3C20 A;  3K52 A;  1OH9 A;  1OHA A;  3QUO A;  3EK6 A;  3D2M A;  4KZT A;  3NWY A;  3U6U A;  2OGX A;  2J4J A;  4A7W A;  4NDO B;  3WWM A;  4NDO A;  2JJX A;  2WXB A;  3S6G A;  3B8G A;  3S6H A;  2VA1 A;  3QUN A;  2IJ9 A;  2WE4 A;  4JZ8 A;  3T7B A;  2JI5 A;  3AB4 A;  4AB7 A;  3KZF A;  2AP9 A;  2AKO A;  1YBD A;  2BTY A;  3ZZH A; 
#chains in the Genus database with same CATH topology
 2V5H A;  2BND A;  3D40 A;  2R98 A;  1GS5 A;  2J5T A;  2J4K A;  2W21 A;  4JZ9 A;  2RD5 A;  3QVF A;  2E9Y A;  3QVH A;  3LL5 A;  3WWN A;  2J5V A;  3ZZG A;  2HMF A;  3QUR A;  4F6T A;  3L76 A;  4AXS A;  2J0X A;  2J0W A;  2JJ4 A;  3C1M A;  2V4Y A;  3K4Y A;  3LKK A;  1E19 A;  4OLC A;  2CDQ A;  3EK5 A;  4NDP A;  4NDQ A;  4NDR B;  3D2P A;  2BNE A;  1GSJ A;  2BMU A;  2J4L A;  4USJ A;  2R8V A;  3ZZF A;  4NDP B;  3AB2 A;  4I49 A;  2A1F A;  1OHB A;  1Z9D A;  2X2W A;  3LL9 A;  3AAW A;  3K4O A;  2OGX B;  3L86 A;  3C1N A;  2BRI A;  3S6K A;  4A7X A;  2WE5 A;  4F6T B;  2BUF A;  2BRX A;  4NDR A;  4JZ7 A;  3TVI A;  4Q1T A;  2BNF A;  1B7B A;  3ZZI A;  3K56 A;  4NDQ B;  3D41 A;  3C20 A;  3K52 A;  1OH9 A;  1OHA A;  3QUO A;  3EK6 A;  3D2M A;  4KZT A;  3NWY A;  3U6U A;  2OGX A;  2J4J A;  4A7W A;  4NDO B;  3WWM A;  4NDO A;  2JJX A;  2WXB A;  3S6G A;  3B8G A;  3S6H A;  2VA1 A;  3QUN A;  2IJ9 A;  2WE4 A;  4JZ8 A;  3T7B A;  2JI5 A;  3AB4 A;  4AB7 A;  3KZF A;  2AP9 A;  2AKO A;  1YBD A;  2BTY A;  3ZZH A; 
#chains in the Genus database with same CATH homology
 2V5H A;  2BND A;  3D40 A;  2R98 A;  1GS5 A;  2J5T A;  2J4K A;  2W21 A;  4JZ9 A;  2RD5 A;  3QVF A;  2E9Y A;  3QVH A;  3LL5 A;  3WWN A;  2J5V A;  3ZZG A;  2HMF A;  3QUR A;  4F6T A;  3L76 A;  4AXS A;  2J0X A;  2J0W A;  2JJ4 A;  3C1M A;  2V4Y A;  3K4Y A;  3LKK A;  1E19 A;  4OLC A;  2CDQ A;  3EK5 A;  4NDP A;  4NDQ A;  4NDR B;  3D2P A;  2BNE A;  1GSJ A;  2BMU A;  2J4L A;  4USJ A;  2R8V A;  3ZZF A;  4NDP B;  3AB2 A;  4I49 A;  2A1F A;  1OHB A;  1Z9D A;  2X2W A;  3LL9 A;  3AAW A;  3K4O A;  2OGX B;  3L86 A;  3C1N A;  2BRI A;  3S6K A;  4A7X A;  2WE5 A;  4F6T B;  2BUF A;  2BRX A;  4NDR A;  4JZ7 A;  3TVI A;  4Q1T A;  2BNF A;  1B7B A;  3ZZI A;  3K56 A;  4NDQ B;  3D41 A;  3C20 A;  3K52 A;  1OH9 A;  1OHA A;  3QUO A;  3EK6 A;  3D2M A;  4KZT A;  3NWY A;  3U6U A;  2OGX A;  2J4J A;  4A7W A;  4NDO B;  3WWM A;  4NDO A;  2JJX A;  2WXB A;  3S6G A;  3B8G A;  3S6H A;  2VA1 A;  3QUN A;  2IJ9 A;  2WE4 A;  4JZ8 A;  3T7B A;  2JI5 A;  3AB4 A;  4AB7 A;  3KZF A;  2AP9 A;  2AKO A;  1YBD A;  2BTY A;  3ZZH A; 
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