1GS5A

N-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetylglutamate and its substrate analog amppnp
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
258
structure length
258
Chain Sequence
b'MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli
molecule tags Transferase
total genus 83
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2001-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gs5A00
4I49A 3K4YA 2JJXA 3LL5A 2R8VA 4Q1TA 3D2MA 2BNFA 2J5VA 3EK6A 1GSJA 3AB4A 3WWNA 1OHAA 4NDRB 4F6TA 3K4OA 3QVFA 2X2WA 4KZTA 2RD5A 4NDOA 3ZZIA 3S6KA 3LKKA 2BMUA 3L86A 4JZ8A 2JJ4A 3U6UA 4USJA 2VA1A 1OHBA 2J0XA 2V5HA 2R98A 2V4YA 3QURA 4F6TB 4JZ9A 2J0WA 3AAWA 2WE5A 1B7BA 4NDOB 4AB7A 2WE4A 3T7BA 1OH9A 3ZZGA 3QUNA 4A7XA 3ZZHA 4NDPA 2BTYA 3D40A 3S6GA 4NDQA 4AXSA 3S6HA 3C1NA 4OLCA 3D41A 3K56A 2E9YA 2BRIA 2AKOA 2HMFA 3K52A 3C20A 3B8GA 1YBDA 2A1FA 3WWMA 2WXBA 2BNEA 4NDPB 2JI5A 3QUOA 4NDQB 3D2PA 3L76A 3QVHA 2OGXA 2AP9A 2CDQA 3NWYA 1Z9DA 2IJ9A 3C1MA 2J5TA 2J4LA 2BNDA 1E19A 3LL9A 4A7WA 1GS5A 3ZZFA 2BRXA 4JZ7A 3AB2A 2J4KA 2OGXB 2BUFA 3EK5A 3KZFA 4NDRA 3TVIA 2J4JA 2W21A
chains in the Genus database with same CATH superfamily
4I49A 3K4YA 2JJXA 3LL5A 2R8VA 4Q1TA 3D2MA 2BNFA 2J5VA 3EK6A 1GSJA 3AB4A 3WWNA 1OHAA 4NDRB 4F6TA 3K4OA 3QVFA 2X2WA 4KZTA 2RD5A 4NDOA 3ZZIA 3S6KA 3LKKA 2BMUA 3L86A 4JZ8A 2JJ4A 3U6UA 4USJA 2VA1A 1OHBA 2J0XA 2V5HA 2R98A 2V4YA 3QURA 4F6TB 4JZ9A 2J0WA 3AAWA 2WE5A 1B7BA 4NDOB 4AB7A 2WE4A 3T7BA 1OH9A 3ZZGA 3QUNA 4A7XA 3ZZHA 4NDPA 2BTYA 3D40A 3S6GA 4NDQA 4AXSA 3S6HA 3C1NA 4OLCA 3D41A 3K56A 2E9YA 2BRIA 2AKOA 2HMFA 3K52A 3C20A 3B8GA 1YBDA 2A1FA 3WWMA 2WXBA 2BNEA 4NDPB 2JI5A 3QUOA 4NDQB 3D2PA 3L76A 3QVHA 2OGXA 2AP9A 2CDQA 3NWYA 1Z9DA 2IJ9A 3C1MA 2J5TA 2J4LA 2BNDA 1E19A 3LL9A 4A7WA 1GS5A 3ZZFA 2BRXA 4JZ7A 3AB2A 2J4KA 2OGXB 2BUFA 3EK5A 3KZFA 4NDRA 3TVIA 2J4JA 2W21A
chains in the Genus database with same CATH topology
4I49A 3K4YA 2JJXA 3LL5A 2R8VA 4Q1TA 3D2MA 2BNFA 2J5VA 3EK6A 1GSJA 3AB4A 3WWNA 1OHAA 4NDRB 4F6TA 3K4OA 3QVFA 2X2WA 4KZTA 2RD5A 4NDOA 3ZZIA 3S6KA 3LKKA 2BMUA 3L86A 4JZ8A 2JJ4A 3U6UA 4USJA 2VA1A 1OHBA 2J0XA 2V5HA 2R98A 2V4YA 3QURA 4F6TB 4JZ9A 2J0WA 3AAWA 2WE5A 1B7BA 4NDOB 4AB7A 2WE4A 3T7BA 1OH9A 3ZZGA 3QUNA 4A7XA 3ZZHA 4NDPA 2BTYA 3D40A 3S6GA 4NDQA 4AXSA 3S6HA 3C1NA 4OLCA 3D41A 3K56A 2E9YA 2BRIA 2AKOA 2HMFA 3K52A 3C20A 3B8GA 1YBDA 2A1FA 3WWMA 2WXBA 2BNEA 4NDPB 2JI5A 3QUOA 4NDQB 3D2PA 3L76A 3QVHA 2OGXA 2AP9A 2CDQA 3NWYA 1Z9DA 2IJ9A 3C1MA 2J5TA 2J4LA 2BNDA 1E19A 3LL9A 4A7WA 1GS5A 3ZZFA 2BRXA 4JZ7A 3AB2A 2J4KA 2OGXB 2BUFA 3EK5A 3KZFA 4NDRA 3TVIA 2J4JA 2W21A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4I49 A;  3K4Y A;  2JJX A;  3LL5 A;  2R8V A;  4Q1T A;  3D2M A;  2BNF A;  2J5V A;  3EK6 A;  1GSJ A;  3AB4 A;  3WWN A;  1OHA A;  4NDR B;  4F6T A;  3K4O A;  3QVF A;  2X2W A;  4KZT A;  2RD5 A;  4NDO A;  3ZZI A;  3S6K A;  3LKK A;  2BMU A;  3L86 A;  4JZ8 A;  2JJ4 A;  3U6U A;  4USJ A;  2VA1 A;  1OHB A;  2J0X A;  2V5H A;  2R98 A;  2V4Y A;  3QUR A;  4F6T B;  4JZ9 A;  2J0W A;  3AAW A;  2WE5 A;  1B7B A;  4NDO B;  4AB7 A;  2WE4 A;  3T7B A;  1OH9 A;  3ZZG A;  3QUN A;  4A7X A;  3ZZH A;  4NDP A;  2BTY A;  3D40 A;  3S6G A;  4NDQ A;  4AXS A;  3S6H A;  3C1N A;  4OLC A;  3D41 A;  3K56 A;  2E9Y A;  2BRI A;  2AKO A;  2HMF A;  3K52 A;  3C20 A;  3B8G A;  1YBD A;  2A1F A;  3WWM A;  2WXB A;  2BNE A;  4NDP B;  2JI5 A;  3QUO A;  4NDQ B;  3D2P A;  3L76 A;  3QVH A;  2OGX A;  2AP9 A;  2CDQ A;  3NWY A;  1Z9D A;  2IJ9 A;  3C1M A;  2J5T A;  2J4L A;  2BND A;  1E19 A;  3LL9 A;  4A7W A;  1GS5 A;  3ZZF A;  2BRX A;  4JZ7 A;  3AB2 A;  2J4K A;  2OGX B;  2BUF A;  3EK5 A;  3KZF A;  4NDR A;  3TVI A;  2J4J A;  2W21 A; 
#chains in the Genus database with same CATH topology
 4I49 A;  3K4Y A;  2JJX A;  3LL5 A;  2R8V A;  4Q1T A;  3D2M A;  2BNF A;  2J5V A;  3EK6 A;  1GSJ A;  3AB4 A;  3WWN A;  1OHA A;  4NDR B;  4F6T A;  3K4O A;  3QVF A;  2X2W A;  4KZT A;  2RD5 A;  4NDO A;  3ZZI A;  3S6K A;  3LKK A;  2BMU A;  3L86 A;  4JZ8 A;  2JJ4 A;  3U6U A;  4USJ A;  2VA1 A;  1OHB A;  2J0X A;  2V5H A;  2R98 A;  2V4Y A;  3QUR A;  4F6T B;  4JZ9 A;  2J0W A;  3AAW A;  2WE5 A;  1B7B A;  4NDO B;  4AB7 A;  2WE4 A;  3T7B A;  1OH9 A;  3ZZG A;  3QUN A;  4A7X A;  3ZZH A;  4NDP A;  2BTY A;  3D40 A;  3S6G A;  4NDQ A;  4AXS A;  3S6H A;  3C1N A;  4OLC A;  3D41 A;  3K56 A;  2E9Y A;  2BRI A;  2AKO A;  2HMF A;  3K52 A;  3C20 A;  3B8G A;  1YBD A;  2A1F A;  3WWM A;  2WXB A;  2BNE A;  4NDP B;  2JI5 A;  3QUO A;  4NDQ B;  3D2P A;  3L76 A;  3QVH A;  2OGX A;  2AP9 A;  2CDQ A;  3NWY A;  1Z9D A;  2IJ9 A;  3C1M A;  2J5T A;  2J4L A;  2BND A;  1E19 A;  3LL9 A;  4A7W A;  1GS5 A;  3ZZF A;  2BRX A;  4JZ7 A;  3AB2 A;  2J4K A;  2OGX B;  2BUF A;  3EK5 A;  3KZF A;  4NDR A;  3TVI A;  2J4J A;  2W21 A; 
#chains in the Genus database with same CATH homology
 4I49 A;  3K4Y A;  2JJX A;  3LL5 A;  2R8V A;  4Q1T A;  3D2M A;  2BNF A;  2J5V A;  3EK6 A;  1GSJ A;  3AB4 A;  3WWN A;  1OHA A;  4NDR B;  4F6T A;  3K4O A;  3QVF A;  2X2W A;  4KZT A;  2RD5 A;  4NDO A;  3ZZI A;  3S6K A;  3LKK A;  2BMU A;  3L86 A;  4JZ8 A;  2JJ4 A;  3U6U A;  4USJ A;  2VA1 A;  1OHB A;  2J0X A;  2V5H A;  2R98 A;  2V4Y A;  3QUR A;  4F6T B;  4JZ9 A;  2J0W A;  3AAW A;  2WE5 A;  1B7B A;  4NDO B;  4AB7 A;  2WE4 A;  3T7B A;  1OH9 A;  3ZZG A;  3QUN A;  4A7X A;  3ZZH A;  4NDP A;  2BTY A;  3D40 A;  3S6G A;  4NDQ A;  4AXS A;  3S6H A;  3C1N A;  4OLC A;  3D41 A;  3K56 A;  2E9Y A;  2BRI A;  2AKO A;  2HMF A;  3K52 A;  3C20 A;  3B8G A;  1YBD A;  2A1F A;  3WWM A;  2WXB A;  2BNE A;  4NDP B;  2JI5 A;  3QUO A;  4NDQ B;  3D2P A;  3L76 A;  3QVH A;  2OGX A;  2AP9 A;  2CDQ A;  3NWY A;  1Z9D A;  2IJ9 A;  3C1M A;  2J5T A;  2J4L A;  2BND A;  1E19 A;  3LL9 A;  4A7W A;  1GS5 A;  3ZZF A;  2BRX A;  4JZ7 A;  3AB2 A;  2J4K A;  2OGX B;  2BUF A;  3EK5 A;  3KZF A;  4NDR A;  3TVI A;  2J4J A;  2W21 A; 
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similar chains in the Genus database (?% sequence similarity)
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