2BTYA

Acetylglutamate kinase from thermotoga maritima complexed with its inhibitor arginine
Total Genus 97
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
97
sequence length
282
structure length
282
Chain Sequence
MRIDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKELEG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
molecule tags Transferase
source organism Thermotoga maritima
total genus 97
structure length 282
sequence length 282
chains with identical sequence B, C
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2btyA00
2BNDA 2JI5A 2R98A 2V5HA 4NDQB 1OH9A 3LKKA 3AAWA 3EK6A 2WE5A 3QVHA 2BRXA 3C1NA 2BRIA 1OHBA 3D2MA 3QUNA 4KZTA 4AXSA 4NDPB 3LL9A 2HMFA 2OGXA 4A7WA 4A7XA 2J4KA 2CDQA 2BNFA 3AB2A 3S6KA 3EK5A 3QURA 2AP9A 4JZ9A 2AKOA 3B8GA 3L86A 2J4JA 2E9YA 2OGXB 1OHAA 2IJ9A 4JZ7A 2BNEA 4F6TA 3WWMA 4USJA 4NDRB 3C20A 1YBDA 2JJXA 3ZZIA 1B7BA 2V4YA 3K56A 2JJ4A 3QVFA 3ZZGA 2J0WA 2BTYA 3TVIA 2J0XA 3K4YA 4AB7A 3LL5A 4NDOA 2J5TA 2J5VA 4OLCA 2R8VA 1GS5A 3ZZFA 2BUFA 3D40A 2A1FA 2WXBA 2WE4A 2BMUA 1E19A 3S6GA 4I49A 1Z9DA 3WWNA 2RD5A 3AB4A 2X2WA 3K4OA 4F6TB 3D2PA 3T7BA 3C1MA 4JZ8A 3QUOA 2J4LA 3NWYA 4NDQA 3D41A 1GSJA 3K52A 3ZZHA 4NDRA 3U6UA 3KZFA 4NDPA 2W21A 4Q1TA 3S6HA 4NDOB 3L76A 2VA1A
chains in the Genus database with same CATH superfamily
2BNDA 2JI5A 2R98A 2V5HA 4NDQB 1OH9A 3LKKA 3AAWA 3EK6A 2WE5A 3QVHA 2BRXA 3C1NA 2BRIA 1OHBA 3D2MA 3QUNA 4KZTA 4AXSA 4NDPB 3LL9A 2HMFA 2OGXA 4A7WA 4A7XA 2J4KA 2CDQA 2BNFA 3AB2A 3S6KA 3EK5A 3QURA 2AP9A 4JZ9A 2AKOA 3B8GA 3L86A 2J4JA 2E9YA 2OGXB 1OHAA 2IJ9A 4JZ7A 2BNEA 4F6TA 3WWMA 4USJA 4NDRB 3C20A 1YBDA 2JJXA 3ZZIA 1B7BA 2V4YA 3K56A 2JJ4A 3QVFA 3ZZGA 2J0WA 2BTYA 3TVIA 2J0XA 3K4YA 4AB7A 3LL5A 4NDOA 2J5TA 2J5VA 4OLCA 2R8VA 1GS5A 3ZZFA 2BUFA 3D40A 2A1FA 2WXBA 2WE4A 2BMUA 1E19A 3S6GA 4I49A 1Z9DA 3WWNA 2RD5A 3AB4A 2X2WA 3K4OA 4F6TB 3D2PA 3T7BA 3C1MA 4JZ8A 3QUOA 2J4LA 3NWYA 4NDQA 3D41A 1GSJA 3K52A 3ZZHA 4NDRA 3U6UA 3KZFA 4NDPA 2W21A 4Q1TA 3S6HA 4NDOB 3L76A 2VA1A
chains in the Genus database with same CATH topology
2BNDA 2JI5A 2R98A 2V5HA 4NDQB 1OH9A 3LKKA 3AAWA 3EK6A 2WE5A 3QVHA 2BRXA 3C1NA 2BRIA 1OHBA 3D2MA 3QUNA 4KZTA 4AXSA 4NDPB 3LL9A 2HMFA 2OGXA 4A7WA 4A7XA 2J4KA 2CDQA 2BNFA 3AB2A 3S6KA 3EK5A 3QURA 2AP9A 4JZ9A 2AKOA 3B8GA 3L86A 2J4JA 2E9YA 2OGXB 1OHAA 2IJ9A 4JZ7A 2BNEA 4F6TA 3WWMA 4USJA 4NDRB 3C20A 1YBDA 2JJXA 3ZZIA 1B7BA 2V4YA 3K56A 2JJ4A 3QVFA 3ZZGA 2J0WA 2BTYA 3TVIA 2J0XA 3K4YA 4AB7A 3LL5A 4NDOA 2J5TA 2J5VA 4OLCA 2R8VA 1GS5A 3ZZFA 2BUFA 3D40A 2A1FA 2WXBA 2WE4A 2BMUA 1E19A 3S6GA 4I49A 1Z9DA 3WWNA 2RD5A 3AB4A 2X2WA 3K4OA 4F6TB 3D2PA 3T7BA 3C1MA 4JZ8A 3QUOA 2J4LA 3NWYA 4NDQA 3D41A 1GSJA 3K52A 3ZZHA 4NDRA 3U6UA 3KZFA 4NDPA 2W21A 4Q1TA 3S6HA 4NDOB 3L76A 2VA1A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2BND A;  2JI5 A;  2R98 A;  2V5H A;  4NDQ B;  1OH9 A;  3LKK A;  3AAW A;  3EK6 A;  2WE5 A;  3QVH A;  2BRX A;  3C1N A;  2BRI A;  1OHB A;  3D2M A;  3QUN A;  4KZT A;  4AXS A;  4NDP B;  3LL9 A;  2HMF A;  2OGX A;  4A7W A;  4A7X A;  2J4K A;  2CDQ A;  2BNF A;  3AB2 A;  3S6K A;  3EK5 A;  3QUR A;  2AP9 A;  4JZ9 A;  2AKO A;  3B8G A;  3L86 A;  2J4J A;  2E9Y A;  2OGX B;  1OHA A;  2IJ9 A;  4JZ7 A;  2BNE A;  4F6T A;  3WWM A;  4USJ A;  4NDR B;  3C20 A;  1YBD A;  2JJX A;  3ZZI A;  1B7B A;  2V4Y A;  3K56 A;  2JJ4 A;  3QVF A;  3ZZG A;  2J0W A;  2BTY A;  3TVI A;  2J0X A;  3K4Y A;  4AB7 A;  3LL5 A;  4NDO A;  2J5T A;  2J5V A;  4OLC A;  2R8V A;  1GS5 A;  3ZZF A;  2BUF A;  3D40 A;  2A1F A;  2WXB A;  2WE4 A;  2BMU A;  1E19 A;  3S6G A;  4I49 A;  1Z9D A;  3WWN A;  2RD5 A;  3AB4 A;  2X2W A;  3K4O A;  4F6T B;  3D2P A;  3T7B A;  3C1M A;  4JZ8 A;  3QUO A;  2J4L A;  3NWY A;  4NDQ A;  3D41 A;  1GSJ A;  3K52 A;  3ZZH A;  4NDR A;  3U6U A;  3KZF A;  4NDP A;  2W21 A;  4Q1T A;  3S6H A;  4NDO B;  3L76 A;  2VA1 A; 
#chains in the Genus database with same CATH topology
 2BND A;  2JI5 A;  2R98 A;  2V5H A;  4NDQ B;  1OH9 A;  3LKK A;  3AAW A;  3EK6 A;  2WE5 A;  3QVH A;  2BRX A;  3C1N A;  2BRI A;  1OHB A;  3D2M A;  3QUN A;  4KZT A;  4AXS A;  4NDP B;  3LL9 A;  2HMF A;  2OGX A;  4A7W A;  4A7X A;  2J4K A;  2CDQ A;  2BNF A;  3AB2 A;  3S6K A;  3EK5 A;  3QUR A;  2AP9 A;  4JZ9 A;  2AKO A;  3B8G A;  3L86 A;  2J4J A;  2E9Y A;  2OGX B;  1OHA A;  2IJ9 A;  4JZ7 A;  2BNE A;  4F6T A;  3WWM A;  4USJ A;  4NDR B;  3C20 A;  1YBD A;  2JJX A;  3ZZI A;  1B7B A;  2V4Y A;  3K56 A;  2JJ4 A;  3QVF A;  3ZZG A;  2J0W A;  2BTY A;  3TVI A;  2J0X A;  3K4Y A;  4AB7 A;  3LL5 A;  4NDO A;  2J5T A;  2J5V A;  4OLC A;  2R8V A;  1GS5 A;  3ZZF A;  2BUF A;  3D40 A;  2A1F A;  2WXB A;  2WE4 A;  2BMU A;  1E19 A;  3S6G A;  4I49 A;  1Z9D A;  3WWN A;  2RD5 A;  3AB4 A;  2X2W A;  3K4O A;  4F6T B;  3D2P A;  3T7B A;  3C1M A;  4JZ8 A;  3QUO A;  2J4L A;  3NWY A;  4NDQ A;  3D41 A;  1GSJ A;  3K52 A;  3ZZH A;  4NDR A;  3U6U A;  3KZF A;  4NDP A;  2W21 A;  4Q1T A;  3S6H A;  4NDO B;  3L76 A;  2VA1 A; 
#chains in the Genus database with same CATH homology
 2BND A;  2JI5 A;  2R98 A;  2V5H A;  4NDQ B;  1OH9 A;  3LKK A;  3AAW A;  3EK6 A;  2WE5 A;  3QVH A;  2BRX A;  3C1N A;  2BRI A;  1OHB A;  3D2M A;  3QUN A;  4KZT A;  4AXS A;  4NDP B;  3LL9 A;  2HMF A;  2OGX A;  4A7W A;  4A7X A;  2J4K A;  2CDQ A;  2BNF A;  3AB2 A;  3S6K A;  3EK5 A;  3QUR A;  2AP9 A;  4JZ9 A;  2AKO A;  3B8G A;  3L86 A;  2J4J A;  2E9Y A;  2OGX B;  1OHA A;  2IJ9 A;  4JZ7 A;  2BNE A;  4F6T A;  3WWM A;  4USJ A;  4NDR B;  3C20 A;  1YBD A;  2JJX A;  3ZZI A;  1B7B A;  2V4Y A;  3K56 A;  2JJ4 A;  3QVF A;  3ZZG A;  2J0W A;  2BTY A;  3TVI A;  2J0X A;  3K4Y A;  4AB7 A;  3LL5 A;  4NDO A;  2J5T A;  2J5V A;  4OLC A;  2R8V A;  1GS5 A;  3ZZF A;  2BUF A;  3D40 A;  2A1F A;  2WXB A;  2WE4 A;  2BMU A;  1E19 A;  3S6G A;  4I49 A;  1Z9D A;  3WWN A;  2RD5 A;  3AB4 A;  2X2W A;  3K4O A;  4F6T B;  3D2P A;  3T7B A;  3C1M A;  4JZ8 A;  3QUO A;  2J4L A;  3NWY A;  4NDQ A;  3D41 A;  1GSJ A;  3K52 A;  3ZZH A;  4NDR A;  3U6U A;  3KZF A;  4NDP A;  2W21 A;  4Q1T A;  3S6H A;  4NDO B;  3L76 A;  2VA1 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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