2OGXA

The crystal structure of the molybdenum storage protein from azotobacter vinelandii loaded with polyoxotungstates (wsto)
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
246
structure length
246
Chain Sequence
GKRPIRLLPWLQVVKIGGRVMDRGADAILPLVEELRKLLPEHRLLILTGAGVRARHVFSVGLDLGLPVGSLAPLAASEAGQNGHILAAMLASEGVSYVEHPTVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLIRTGVRPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
molecule keywords Molybdenum storage protein subunit alpha
publication title Towards Biological Supramolecular Chemistry: A Variety of Pocket-Templated, Individual Metal Oxide Cluster Nucleations in the Cavity of a Mo/W-Storage Protein.
pubmed doi rcsb
total genus 73
structure length 246
sequence length 246
ec nomenclature
pdb deposition date 2007-01-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2ogxA00
1OH9A 3QUOA 2BNEA 2R98A 2BRXA 4JZ8A 4NDPB 4A7WA 1YBDA 2V4YA 2W21A 2R8VA 2J4LA 4NDOA 2J0WA 3QUNA 3NWYA 1GSJA 2X2WA 4NDOB 3K56A 3S6KA 2J5VA 4JZ7A 1OHAA 3S6HA 3B8GA 2AKOA 3QVFA 3C1MA 3LKKA 4NDPA 4NDQA 2BNFA 2V5HA 2BMUA 3D2MA 3K52A 3QVHA 3LL5A 4NDQB 2J4KA 2VA1A 4NDRA 3QURA 3U6UA 2RD5A 3LL9A 3AB4A 4I49A 2BTYA 4NDRB 3C20A 3WWNA 4AXSA 2WE4A 3L76A 3ZZIA 2OGXB 2JI5A 2BUFA 3TVIA 2E9YA 3EK6A 3L86A 3AAWA 4A7XA 4KZTA 3C1NA 3T7BA 3S6GA 3K4YA 4F6TA 4JZ9A 4Q1TA 2J0XA 3KZFA 2JJ4A 2BNDA 4USJA 2OGXA 4F6TB 3ZZGA 2BRIA 1Z9DA 1E19A 1B7BA 3EK5A 3AB2A 3ZZFA 2WXBA 4AB7A 2CDQA 2WE5A 2J5TA 3D2PA 1GS5A 3WWMA 4OLCA 2AP9A 2JJXA 2A1FA 2J4JA 2IJ9A 3D41A 1OHBA 2HMFA 3K4OA 3ZZHA 3D40A
chains in the Genus database with same CATH superfamily
1OH9A 3QUOA 2BNEA 2R98A 2BRXA 4JZ8A 4NDPB 4A7WA 1YBDA 2V4YA 2W21A 2R8VA 2J4LA 4NDOA 2J0WA 3QUNA 3NWYA 1GSJA 2X2WA 4NDOB 3K56A 3S6KA 2J5VA 4JZ7A 1OHAA 3S6HA 3B8GA 2AKOA 3QVFA 3C1MA 3LKKA 4NDPA 4NDQA 2BNFA 2V5HA 2BMUA 3D2MA 3K52A 3QVHA 3LL5A 4NDQB 2J4KA 2VA1A 4NDRA 3QURA 3U6UA 2RD5A 3LL9A 3AB4A 4I49A 2BTYA 4NDRB 3C20A 3WWNA 4AXSA 2WE4A 3L76A 3ZZIA 2OGXB 2JI5A 2BUFA 3TVIA 2E9YA 3EK6A 3L86A 3AAWA 4A7XA 4KZTA 3C1NA 3T7BA 3S6GA 3K4YA 4F6TA 4JZ9A 4Q1TA 2J0XA 3KZFA 2JJ4A 2BNDA 4USJA 2OGXA 4F6TB 3ZZGA 2BRIA 1Z9DA 1E19A 1B7BA 3EK5A 3AB2A 3ZZFA 2WXBA 4AB7A 2CDQA 2WE5A 2J5TA 3D2PA 1GS5A 3WWMA 4OLCA 2AP9A 2JJXA 2A1FA 2J4JA 2IJ9A 3D41A 1OHBA 2HMFA 3K4OA 3ZZHA 3D40A
chains in the Genus database with same CATH topology
1OH9A 3QUOA 2BNEA 2R98A 2BRXA 4JZ8A 4NDPB 4A7WA 1YBDA 2V4YA 2W21A 2R8VA 2J4LA 4NDOA 2J0WA 3QUNA 3NWYA 1GSJA 2X2WA 4NDOB 3K56A 3S6KA 2J5VA 4JZ7A 1OHAA 3S6HA 3B8GA 2AKOA 3QVFA 3C1MA 3LKKA 4NDPA 4NDQA 2BNFA 2V5HA 2BMUA 3D2MA 3K52A 3QVHA 3LL5A 4NDQB 2J4KA 2VA1A 4NDRA 3QURA 3U6UA 2RD5A 3LL9A 3AB4A 4I49A 2BTYA 4NDRB 3C20A 3WWNA 4AXSA 2WE4A 3L76A 3ZZIA 2OGXB 2JI5A 2BUFA 3TVIA 2E9YA 3EK6A 3L86A 3AAWA 4A7XA 4KZTA 3C1NA 3T7BA 3S6GA 3K4YA 4F6TA 4JZ9A 4Q1TA 2J0XA 3KZFA 2JJ4A 2BNDA 4USJA 2OGXA 4F6TB 3ZZGA 2BRIA 1Z9DA 1E19A 1B7BA 3EK5A 3AB2A 3ZZFA 2WXBA 4AB7A 2CDQA 2WE5A 2J5TA 3D2PA 1GS5A 3WWMA 4OLCA 2AP9A 2JJXA 2A1FA 2J4JA 2IJ9A 3D41A 1OHBA 2HMFA 3K4OA 3ZZHA 3D40A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OH9 A;  3QUO A;  2BNE A;  2R98 A;  2BRX A;  4JZ8 A;  4NDP B;  4A7W A;  1YBD A;  2V4Y A;  2W21 A;  2R8V A;  2J4L A;  4NDO A;  2J0W A;  3QUN A;  3NWY A;  1GSJ A;  2X2W A;  4NDO B;  3K56 A;  3S6K A;  2J5V A;  4JZ7 A;  1OHA A;  3S6H A;  3B8G A;  2AKO A;  3QVF A;  3C1M A;  3LKK A;  4NDP A;  4NDQ A;  2BNF A;  2V5H A;  2BMU A;  3D2M A;  3K52 A;  3QVH A;  3LL5 A;  4NDQ B;  2J4K A;  2VA1 A;  4NDR A;  3QUR A;  3U6U A;  2RD5 A;  3LL9 A;  3AB4 A;  4I49 A;  2BTY A;  4NDR B;  3C20 A;  3WWN A;  4AXS A;  2WE4 A;  3L76 A;  3ZZI A;  2OGX B;  2JI5 A;  2BUF A;  3TVI A;  2E9Y A;  3EK6 A;  3L86 A;  3AAW A;  4A7X A;  4KZT A;  3C1N A;  3T7B A;  3S6G A;  3K4Y A;  4F6T A;  4JZ9 A;  4Q1T A;  2J0X A;  3KZF A;  2JJ4 A;  2BND A;  4USJ A;  2OGX A;  4F6T B;  3ZZG A;  2BRI A;  1Z9D A;  1E19 A;  1B7B A;  3EK5 A;  3AB2 A;  3ZZF A;  2WXB A;  4AB7 A;  2CDQ A;  2WE5 A;  2J5T A;  3D2P A;  1GS5 A;  3WWM A;  4OLC A;  2AP9 A;  2JJX A;  2A1F A;  2J4J A;  2IJ9 A;  3D41 A;  1OHB A;  2HMF A;  3K4O A;  3ZZH A;  3D40 A; 
#chains in the Genus database with same CATH topology
 1OH9 A;  3QUO A;  2BNE A;  2R98 A;  2BRX A;  4JZ8 A;  4NDP B;  4A7W A;  1YBD A;  2V4Y A;  2W21 A;  2R8V A;  2J4L A;  4NDO A;  2J0W A;  3QUN A;  3NWY A;  1GSJ A;  2X2W A;  4NDO B;  3K56 A;  3S6K A;  2J5V A;  4JZ7 A;  1OHA A;  3S6H A;  3B8G A;  2AKO A;  3QVF A;  3C1M A;  3LKK A;  4NDP A;  4NDQ A;  2BNF A;  2V5H A;  2BMU A;  3D2M A;  3K52 A;  3QVH A;  3LL5 A;  4NDQ B;  2J4K A;  2VA1 A;  4NDR A;  3QUR A;  3U6U A;  2RD5 A;  3LL9 A;  3AB4 A;  4I49 A;  2BTY A;  4NDR B;  3C20 A;  3WWN A;  4AXS A;  2WE4 A;  3L76 A;  3ZZI A;  2OGX B;  2JI5 A;  2BUF A;  3TVI A;  2E9Y A;  3EK6 A;  3L86 A;  3AAW A;  4A7X A;  4KZT A;  3C1N A;  3T7B A;  3S6G A;  3K4Y A;  4F6T A;  4JZ9 A;  4Q1T A;  2J0X A;  3KZF A;  2JJ4 A;  2BND A;  4USJ A;  2OGX A;  4F6T B;  3ZZG A;  2BRI A;  1Z9D A;  1E19 A;  1B7B A;  3EK5 A;  3AB2 A;  3ZZF A;  2WXB A;  4AB7 A;  2CDQ A;  2WE5 A;  2J5T A;  3D2P A;  1GS5 A;  3WWM A;  4OLC A;  2AP9 A;  2JJX A;  2A1F A;  2J4J A;  2IJ9 A;  3D41 A;  1OHB A;  2HMF A;  3K4O A;  3ZZH A;  3D40 A; 
#chains in the Genus database with same CATH homology
 1OH9 A;  3QUO A;  2BNE A;  2R98 A;  2BRX A;  4JZ8 A;  4NDP B;  4A7W A;  1YBD A;  2V4Y A;  2W21 A;  2R8V A;  2J4L A;  4NDO A;  2J0W A;  3QUN A;  3NWY A;  1GSJ A;  2X2W A;  4NDO B;  3K56 A;  3S6K A;  2J5V A;  4JZ7 A;  1OHA A;  3S6H A;  3B8G A;  2AKO A;  3QVF A;  3C1M A;  3LKK A;  4NDP A;  4NDQ A;  2BNF A;  2V5H A;  2BMU A;  3D2M A;  3K52 A;  3QVH A;  3LL5 A;  4NDQ B;  2J4K A;  2VA1 A;  4NDR A;  3QUR A;  3U6U A;  2RD5 A;  3LL9 A;  3AB4 A;  4I49 A;  2BTY A;  4NDR B;  3C20 A;  3WWN A;  4AXS A;  2WE4 A;  3L76 A;  3ZZI A;  2OGX B;  2JI5 A;  2BUF A;  3TVI A;  2E9Y A;  3EK6 A;  3L86 A;  3AAW A;  4A7X A;  4KZT A;  3C1N A;  3T7B A;  3S6G A;  3K4Y A;  4F6T A;  4JZ9 A;  4Q1T A;  2J0X A;  3KZF A;  2JJ4 A;  2BND A;  4USJ A;  2OGX A;  4F6T B;  3ZZG A;  2BRI A;  1Z9D A;  1E19 A;  1B7B A;  3EK5 A;  3AB2 A;  3ZZF A;  2WXB A;  4AB7 A;  2CDQ A;  2WE5 A;  2J5T A;  3D2P A;  1GS5 A;  3WWM A;  4OLC A;  2AP9 A;  2JJX A;  2A1F A;  2J4J A;  2IJ9 A;  3D41 A;  1OHB A;  2HMF A;  3K4O A;  3ZZH A;  3D40 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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