2OGXA

The crystal structure of the molybdenum storage protein from azotobacter vinelandii loaded with polyoxotungstates (wsto)
Total Genus 73
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
246
structure length
246
Chain Sequence
GKRPIRLLPWLQVVKIGGRVMDRGADAILPLVEELRKLLPEHRLLILTGAGVRARHVFSVGLDLGLPVGSLAPLAASEAGQNGHILAAMLASEGVSYVEHPTVADQLAIHLSATRAVVGSAFPPYHHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSEGPLPVDRALLDVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLIRTGVRPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Metal binding protein
molecule keywords Molybdenum storage protein subunit alpha
publication title Towards Biological Supramolecular Chemistry: A Variety of Pocket-Templated, Individual Metal Oxide Cluster Nucleations in the Cavity of a Mo/W-Storage Protein.
pubmed doi rcsb
total genus 73
structure length 246
sequence length 246
ec nomenclature
pdb deposition date 2007-01-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2ogxA00
2BRIA 2V5HA 4F6TB 1GSJA 4Q1TA 2V4YA 2R8VA 2AKOA 3K4OA 2RD5A 4KZTA 4USJA 3TVIA 3K52A 3D2PA 2J4KA 2BTYA 4JZ7A 1E19A 3KZFA 2VA1A 2HMFA 2BNFA 3LL5A 4NDPB 2J0XA 2BUFA 3QVFA 3ZZHA 4NDOB 4JZ8A 3QVHA 3WWNA 3T7BA 4AXSA 2J5TA 4NDPA 3S6GA 3WWMA 3AB2A 4NDOA 2CDQA 3QUOA 3EK5A 3LL9A 4F6TA 3C20A 2R98A 3AAWA 4A7WA 2OGXB 2J5VA 3AB4A 4NDQB 2BNDA 4A7XA 2AP9A 2BNEA 2OGXA 2WE5A 2WXBA 2X2WA 3QURA 2J0WA 4NDQA 3ZZFA 4I49A 3U6UA 3S6KA 1B7BA 1OHAA 4OLCA 2A1FA 3NWYA 4NDRB 3QUNA 3L86A 4AB7A 3C1NA 4NDRA 3EK6A 3L76A 2WE4A 3K56A 3ZZGA 3D40A 2BMUA 3C1MA 3B8GA 3K4YA 2JJXA 2BRXA 2E9YA 1OHBA 3D2MA 2J4LA 2W21A 2J4JA 1OH9A 1Z9DA 3ZZIA 1YBDA 1GS5A 2JJ4A 3LKKA 4JZ9A 3S6HA 2IJ9A 2JI5A 3D41A
chains in the Genus database with same CATH superfamily
2BRIA 2V5HA 4F6TB 1GSJA 4Q1TA 2V4YA 2R8VA 2AKOA 3K4OA 2RD5A 4KZTA 4USJA 3TVIA 3K52A 3D2PA 2J4KA 2BTYA 4JZ7A 1E19A 3KZFA 2VA1A 2HMFA 2BNFA 3LL5A 4NDPB 2J0XA 2BUFA 3QVFA 3ZZHA 4NDOB 4JZ8A 3QVHA 3WWNA 3T7BA 4AXSA 2J5TA 4NDPA 3S6GA 3WWMA 3AB2A 4NDOA 2CDQA 3QUOA 3EK5A 3LL9A 4F6TA 3C20A 2R98A 3AAWA 4A7WA 2OGXB 2J5VA 3AB4A 4NDQB 2BNDA 4A7XA 2AP9A 2BNEA 2OGXA 2WE5A 2WXBA 2X2WA 3QURA 2J0WA 4NDQA 3ZZFA 4I49A 3U6UA 3S6KA 1B7BA 1OHAA 4OLCA 2A1FA 3NWYA 4NDRB 3QUNA 3L86A 4AB7A 3C1NA 4NDRA 3EK6A 3L76A 2WE4A 3K56A 3ZZGA 3D40A 2BMUA 3C1MA 3B8GA 3K4YA 2JJXA 2BRXA 2E9YA 1OHBA 3D2MA 2J4LA 2W21A 2J4JA 1OH9A 1Z9DA 3ZZIA 1YBDA 1GS5A 2JJ4A 3LKKA 4JZ9A 3S6HA 2IJ9A 2JI5A 3D41A
chains in the Genus database with same CATH topology
2BRIA 2V5HA 4F6TB 1GSJA 4Q1TA 2V4YA 2R8VA 2AKOA 3K4OA 2RD5A 4KZTA 4USJA 3TVIA 3K52A 3D2PA 2J4KA 2BTYA 4JZ7A 1E19A 3KZFA 2VA1A 2HMFA 2BNFA 3LL5A 4NDPB 2J0XA 2BUFA 3QVFA 3ZZHA 4NDOB 4JZ8A 3QVHA 3WWNA 3T7BA 4AXSA 2J5TA 4NDPA 3S6GA 3WWMA 3AB2A 4NDOA 2CDQA 3QUOA 3EK5A 3LL9A 4F6TA 3C20A 2R98A 3AAWA 4A7WA 2OGXB 2J5VA 3AB4A 4NDQB 2BNDA 4A7XA 2AP9A 2BNEA 2OGXA 2WE5A 2WXBA 2X2WA 3QURA 2J0WA 4NDQA 3ZZFA 4I49A 3U6UA 3S6KA 1B7BA 1OHAA 4OLCA 2A1FA 3NWYA 4NDRB 3QUNA 3L86A 4AB7A 3C1NA 4NDRA 3EK6A 3L76A 2WE4A 3K56A 3ZZGA 3D40A 2BMUA 3C1MA 3B8GA 3K4YA 2JJXA 2BRXA 2E9YA 1OHBA 3D2MA 2J4LA 2W21A 2J4JA 1OH9A 1Z9DA 3ZZIA 1YBDA 1GS5A 2JJ4A 3LKKA 4JZ9A 3S6HA 2IJ9A 2JI5A 3D41A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BRI A;  2V5H A;  4F6T B;  1GSJ A;  4Q1T A;  2V4Y A;  2R8V A;  2AKO A;  3K4O A;  2RD5 A;  4KZT A;  4USJ A;  3TVI A;  3K52 A;  3D2P A;  2J4K A;  2BTY A;  4JZ7 A;  1E19 A;  3KZF A;  2VA1 A;  2HMF A;  2BNF A;  3LL5 A;  4NDP B;  2J0X A;  2BUF A;  3QVF A;  3ZZH A;  4NDO B;  4JZ8 A;  3QVH A;  3WWN A;  3T7B A;  4AXS A;  2J5T A;  4NDP A;  3S6G A;  3WWM A;  3AB2 A;  4NDO A;  2CDQ A;  3QUO A;  3EK5 A;  3LL9 A;  4F6T A;  3C20 A;  2R98 A;  3AAW A;  4A7W A;  2OGX B;  2J5V A;  3AB4 A;  4NDQ B;  2BND A;  4A7X A;  2AP9 A;  2BNE A;  2OGX A;  2WE5 A;  2WXB A;  2X2W A;  3QUR A;  2J0W A;  4NDQ A;  3ZZF A;  4I49 A;  3U6U A;  3S6K A;  1B7B A;  1OHA A;  4OLC A;  2A1F A;  3NWY A;  4NDR B;  3QUN A;  3L86 A;  4AB7 A;  3C1N A;  4NDR A;  3EK6 A;  3L76 A;  2WE4 A;  3K56 A;  3ZZG A;  3D40 A;  2BMU A;  3C1M A;  3B8G A;  3K4Y A;  2JJX A;  2BRX A;  2E9Y A;  1OHB A;  3D2M A;  2J4L A;  2W21 A;  2J4J A;  1OH9 A;  1Z9D A;  3ZZI A;  1YBD A;  1GS5 A;  2JJ4 A;  3LKK A;  4JZ9 A;  3S6H A;  2IJ9 A;  2JI5 A;  3D41 A; 
#chains in the Genus database with same CATH topology
 2BRI A;  2V5H A;  4F6T B;  1GSJ A;  4Q1T A;  2V4Y A;  2R8V A;  2AKO A;  3K4O A;  2RD5 A;  4KZT A;  4USJ A;  3TVI A;  3K52 A;  3D2P A;  2J4K A;  2BTY A;  4JZ7 A;  1E19 A;  3KZF A;  2VA1 A;  2HMF A;  2BNF A;  3LL5 A;  4NDP B;  2J0X A;  2BUF A;  3QVF A;  3ZZH A;  4NDO B;  4JZ8 A;  3QVH A;  3WWN A;  3T7B A;  4AXS A;  2J5T A;  4NDP A;  3S6G A;  3WWM A;  3AB2 A;  4NDO A;  2CDQ A;  3QUO A;  3EK5 A;  3LL9 A;  4F6T A;  3C20 A;  2R98 A;  3AAW A;  4A7W A;  2OGX B;  2J5V A;  3AB4 A;  4NDQ B;  2BND A;  4A7X A;  2AP9 A;  2BNE A;  2OGX A;  2WE5 A;  2WXB A;  2X2W A;  3QUR A;  2J0W A;  4NDQ A;  3ZZF A;  4I49 A;  3U6U A;  3S6K A;  1B7B A;  1OHA A;  4OLC A;  2A1F A;  3NWY A;  4NDR B;  3QUN A;  3L86 A;  4AB7 A;  3C1N A;  4NDR A;  3EK6 A;  3L76 A;  2WE4 A;  3K56 A;  3ZZG A;  3D40 A;  2BMU A;  3C1M A;  3B8G A;  3K4Y A;  2JJX A;  2BRX A;  2E9Y A;  1OHB A;  3D2M A;  2J4L A;  2W21 A;  2J4J A;  1OH9 A;  1Z9D A;  3ZZI A;  1YBD A;  1GS5 A;  2JJ4 A;  3LKK A;  4JZ9 A;  3S6H A;  2IJ9 A;  2JI5 A;  3D41 A; 
#chains in the Genus database with same CATH homology
 2BRI A;  2V5H A;  4F6T B;  1GSJ A;  4Q1T A;  2V4Y A;  2R8V A;  2AKO A;  3K4O A;  2RD5 A;  4KZT A;  4USJ A;  3TVI A;  3K52 A;  3D2P A;  2J4K A;  2BTY A;  4JZ7 A;  1E19 A;  3KZF A;  2VA1 A;  2HMF A;  2BNF A;  3LL5 A;  4NDP B;  2J0X A;  2BUF A;  3QVF A;  3ZZH A;  4NDO B;  4JZ8 A;  3QVH A;  3WWN A;  3T7B A;  4AXS A;  2J5T A;  4NDP A;  3S6G A;  3WWM A;  3AB2 A;  4NDO A;  2CDQ A;  3QUO A;  3EK5 A;  3LL9 A;  4F6T A;  3C20 A;  2R98 A;  3AAW A;  4A7W A;  2OGX B;  2J5V A;  3AB4 A;  4NDQ B;  2BND A;  4A7X A;  2AP9 A;  2BNE A;  2OGX A;  2WE5 A;  2WXB A;  2X2W A;  3QUR A;  2J0W A;  4NDQ A;  3ZZF A;  4I49 A;  3U6U A;  3S6K A;  1B7B A;  1OHA A;  4OLC A;  2A1F A;  3NWY A;  4NDR B;  3QUN A;  3L86 A;  4AB7 A;  3C1N A;  4NDR A;  3EK6 A;  3L76 A;  2WE4 A;  3K56 A;  3ZZG A;  3D40 A;  2BMU A;  3C1M A;  3B8G A;  3K4Y A;  2JJX A;  2BRX A;  2E9Y A;  1OHB A;  3D2M A;  2J4L A;  2W21 A;  2J4J A;  1OH9 A;  1Z9D A;  3ZZI A;  1YBD A;  1GS5 A;  2JJ4 A;  3LKK A;  4JZ9 A;  3S6H A;  2IJ9 A;  2JI5 A;  3D41 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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