2JJ4A

The complex of pii and acetylglutamate kinase from synechococcus elongatus pcc7942
Total Genus 81
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
81
sequence length
284
structure length
284
Chain Sequence
AGAADRVRILSEALPYLQQFAGRTVVVKYGGAAMKQEELKEAVMRDIVFLACVGMRPVVVHGGGPEINAWLGRVGIEPQFHNGLRVTDADTMEVVEMVLVGRVNKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNSEVIEPLLERGYIPVISSVAADENGQSFNINADTVAGEIAAALNAEKLILLTDTRGILEDPKRPESLIPRLNIPQSRELIAQGIVGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords ACETYLGLUTAMATE KINASE
publication title The Crystal Structure of the Complex of Pii and Acetylglutamate Kinase Reveals How Pii Controls the Storage of Nitrogen as Arginine
pubmed doi rcsb
source organism Synechococcus elongatus
total genus 81
structure length 284
sequence length 284
chains with identical sequence B, C
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2007-07-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2jj4A00
3QUOA 3TVIA 2R98A 2IJ9A 2VA1A 2WXBA 1GSJA 3LKKA 4F6TB 3QUNA 3S6KA 1OH9A 2R8VA 3T7BA 4AXSA 1Z9DA 3K4OA 4Q1TA 4AB7A 3LL5A 3ZZIA 2BRXA 4JZ7A 3K52A 2X2WA 2E9YA 4F6TA 2BNDA 2A1FA 4NDPA 3K4YA 2AKOA 3D41A 3WWNA 2RD5A 4NDOB 4A7WA 3D40A 2BUFA 3AB2A 4NDPB 3C20A 2V4YA 1YBDA 2HMFA 2AP9A 2J0XA 2J0WA 2JI5A 2OGXA 1B7BA 3L86A 3S6HA 4A7XA 2J4KA 4OLCA 4NDOA 3B8GA 1E19A 2J5VA 4JZ9A 2BNFA 2BNEA 2OGXB 1OHBA 3ZZFA 3L76A 2V5HA 2JJXA 2CDQA 3D2MA 2BMUA 3QVFA 3U6UA 3C1MA 3ZZGA 1GS5A 2BRIA 3AB4A 3C1NA 2W21A 2WE4A 3LL9A 3ZZHA 3QURA 4KZTA 3QVHA 2J4LA 1OHAA 3K56A 4NDRA 3KZFA 4NDQA 2J5TA 3AAWA 2BTYA 4USJA 3D2PA 2J4JA 2WE5A 3EK5A 3EK6A 4JZ8A 4NDRB 4NDQB 4I49A 3S6GA 2JJ4A 3NWYA 3WWMA
chains in the Genus database with same CATH superfamily
3QUOA 3TVIA 2R98A 2IJ9A 2VA1A 2WXBA 1GSJA 3LKKA 4F6TB 3QUNA 3S6KA 1OH9A 2R8VA 3T7BA 4AXSA 1Z9DA 3K4OA 4Q1TA 4AB7A 3LL5A 3ZZIA 2BRXA 4JZ7A 3K52A 2X2WA 2E9YA 4F6TA 2BNDA 2A1FA 4NDPA 3K4YA 2AKOA 3D41A 3WWNA 2RD5A 4NDOB 4A7WA 3D40A 2BUFA 3AB2A 4NDPB 3C20A 2V4YA 1YBDA 2HMFA 2AP9A 2J0XA 2J0WA 2JI5A 2OGXA 1B7BA 3L86A 3S6HA 4A7XA 2J4KA 4OLCA 4NDOA 3B8GA 1E19A 2J5VA 4JZ9A 2BNFA 2BNEA 2OGXB 1OHBA 3ZZFA 3L76A 2V5HA 2JJXA 2CDQA 3D2MA 2BMUA 3QVFA 3U6UA 3C1MA 3ZZGA 1GS5A 2BRIA 3AB4A 3C1NA 2W21A 2WE4A 3LL9A 3ZZHA 3QURA 4KZTA 3QVHA 2J4LA 1OHAA 3K56A 4NDRA 3KZFA 4NDQA 2J5TA 3AAWA 2BTYA 4USJA 3D2PA 2J4JA 2WE5A 3EK5A 3EK6A 4JZ8A 4NDRB 4NDQB 4I49A 3S6GA 2JJ4A 3NWYA 3WWMA
chains in the Genus database with same CATH topology
3QUOA 3TVIA 2R98A 2IJ9A 2VA1A 2WXBA 1GSJA 3LKKA 4F6TB 3QUNA 3S6KA 1OH9A 2R8VA 3T7BA 4AXSA 1Z9DA 3K4OA 4Q1TA 4AB7A 3LL5A 3ZZIA 2BRXA 4JZ7A 3K52A 2X2WA 2E9YA 4F6TA 2BNDA 2A1FA 4NDPA 3K4YA 2AKOA 3D41A 3WWNA 2RD5A 4NDOB 4A7WA 3D40A 2BUFA 3AB2A 4NDPB 3C20A 2V4YA 1YBDA 2HMFA 2AP9A 2J0XA 2J0WA 2JI5A 2OGXA 1B7BA 3L86A 3S6HA 4A7XA 2J4KA 4OLCA 4NDOA 3B8GA 1E19A 2J5VA 4JZ9A 2BNFA 2BNEA 2OGXB 1OHBA 3ZZFA 3L76A 2V5HA 2JJXA 2CDQA 3D2MA 2BMUA 3QVFA 3U6UA 3C1MA 3ZZGA 1GS5A 2BRIA 3AB4A 3C1NA 2W21A 2WE4A 3LL9A 3ZZHA 3QURA 4KZTA 3QVHA 2J4LA 1OHAA 3K56A 4NDRA 3KZFA 4NDQA 2J5TA 3AAWA 2BTYA 4USJA 3D2PA 2J4JA 2WE5A 3EK5A 3EK6A 4JZ8A 4NDRB 4NDQB 4I49A 3S6GA 2JJ4A 3NWYA 3WWMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3QUO A;  3TVI A;  2R98 A;  2IJ9 A;  2VA1 A;  2WXB A;  1GSJ A;  3LKK A;  4F6T B;  3QUN A;  3S6K A;  1OH9 A;  2R8V A;  3T7B A;  4AXS A;  1Z9D A;  3K4O A;  4Q1T A;  4AB7 A;  3LL5 A;  3ZZI A;  2BRX A;  4JZ7 A;  3K52 A;  2X2W A;  2E9Y A;  4F6T A;  2BND A;  2A1F A;  4NDP A;  3K4Y A;  2AKO A;  3D41 A;  3WWN A;  2RD5 A;  4NDO B;  4A7W A;  3D40 A;  2BUF A;  3AB2 A;  4NDP B;  3C20 A;  2V4Y A;  1YBD A;  2HMF A;  2AP9 A;  2J0X A;  2J0W A;  2JI5 A;  2OGX A;  1B7B A;  3L86 A;  3S6H A;  4A7X A;  2J4K A;  4OLC A;  4NDO A;  3B8G A;  1E19 A;  2J5V A;  4JZ9 A;  2BNF A;  2BNE A;  2OGX B;  1OHB A;  3ZZF A;  3L76 A;  2V5H A;  2JJX A;  2CDQ A;  3D2M A;  2BMU A;  3QVF A;  3U6U A;  3C1M A;  3ZZG A;  1GS5 A;  2BRI A;  3AB4 A;  3C1N A;  2W21 A;  2WE4 A;  3LL9 A;  3ZZH A;  3QUR A;  4KZT A;  3QVH A;  2J4L A;  1OHA A;  3K56 A;  4NDR A;  3KZF A;  4NDQ A;  2J5T A;  3AAW A;  2BTY A;  4USJ A;  3D2P A;  2J4J A;  2WE5 A;  3EK5 A;  3EK6 A;  4JZ8 A;  4NDR B;  4NDQ B;  4I49 A;  3S6G A;  2JJ4 A;  3NWY A;  3WWM A; 
#chains in the Genus database with same CATH topology
 3QUO A;  3TVI A;  2R98 A;  2IJ9 A;  2VA1 A;  2WXB A;  1GSJ A;  3LKK A;  4F6T B;  3QUN A;  3S6K A;  1OH9 A;  2R8V A;  3T7B A;  4AXS A;  1Z9D A;  3K4O A;  4Q1T A;  4AB7 A;  3LL5 A;  3ZZI A;  2BRX A;  4JZ7 A;  3K52 A;  2X2W A;  2E9Y A;  4F6T A;  2BND A;  2A1F A;  4NDP A;  3K4Y A;  2AKO A;  3D41 A;  3WWN A;  2RD5 A;  4NDO B;  4A7W A;  3D40 A;  2BUF A;  3AB2 A;  4NDP B;  3C20 A;  2V4Y A;  1YBD A;  2HMF A;  2AP9 A;  2J0X A;  2J0W A;  2JI5 A;  2OGX A;  1B7B A;  3L86 A;  3S6H A;  4A7X A;  2J4K A;  4OLC A;  4NDO A;  3B8G A;  1E19 A;  2J5V A;  4JZ9 A;  2BNF A;  2BNE A;  2OGX B;  1OHB A;  3ZZF A;  3L76 A;  2V5H A;  2JJX A;  2CDQ A;  3D2M A;  2BMU A;  3QVF A;  3U6U A;  3C1M A;  3ZZG A;  1GS5 A;  2BRI A;  3AB4 A;  3C1N A;  2W21 A;  2WE4 A;  3LL9 A;  3ZZH A;  3QUR A;  4KZT A;  3QVH A;  2J4L A;  1OHA A;  3K56 A;  4NDR A;  3KZF A;  4NDQ A;  2J5T A;  3AAW A;  2BTY A;  4USJ A;  3D2P A;  2J4J A;  2WE5 A;  3EK5 A;  3EK6 A;  4JZ8 A;  4NDR B;  4NDQ B;  4I49 A;  3S6G A;  2JJ4 A;  3NWY A;  3WWM A; 
#chains in the Genus database with same CATH homology
 3QUO A;  3TVI A;  2R98 A;  2IJ9 A;  2VA1 A;  2WXB A;  1GSJ A;  3LKK A;  4F6T B;  3QUN A;  3S6K A;  1OH9 A;  2R8V A;  3T7B A;  4AXS A;  1Z9D A;  3K4O A;  4Q1T A;  4AB7 A;  3LL5 A;  3ZZI A;  2BRX A;  4JZ7 A;  3K52 A;  2X2W A;  2E9Y A;  4F6T A;  2BND A;  2A1F A;  4NDP A;  3K4Y A;  2AKO A;  3D41 A;  3WWN A;  2RD5 A;  4NDO B;  4A7W A;  3D40 A;  2BUF A;  3AB2 A;  4NDP B;  3C20 A;  2V4Y A;  1YBD A;  2HMF A;  2AP9 A;  2J0X A;  2J0W A;  2JI5 A;  2OGX A;  1B7B A;  3L86 A;  3S6H A;  4A7X A;  2J4K A;  4OLC A;  4NDO A;  3B8G A;  1E19 A;  2J5V A;  4JZ9 A;  2BNF A;  2BNE A;  2OGX B;  1OHB A;  3ZZF A;  3L76 A;  2V5H A;  2JJX A;  2CDQ A;  3D2M A;  2BMU A;  3QVF A;  3U6U A;  3C1M A;  3ZZG A;  1GS5 A;  2BRI A;  3AB4 A;  3C1N A;  2W21 A;  2WE4 A;  3LL9 A;  3ZZH A;  3QUR A;  4KZT A;  3QVH A;  2J4L A;  1OHA A;  3K56 A;  4NDR A;  3KZF A;  4NDQ A;  2J5T A;  3AAW A;  2BTY A;  4USJ A;  3D2P A;  2J4J A;  2WE5 A;  3EK5 A;  3EK6 A;  4JZ8 A;  4NDR B;  4NDQ B;  4I49 A;  3S6G A;  2JJ4 A;  3NWY A;  3WWM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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