3ZZFA

Crystal structure of the amino acid kinase domain from saccharomyces cerevisiae acetylglutamate kinase complexed with its substrate n- acetylglutamate
Total Genus 93
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
93
sequence length
291
structure length
291
Chain Sequence
NGFSATRSTVIQLLNNISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTALEQLGVRARPITSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRGY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
pubmed doi rcsb
source organism Saccharomyces cerevisiae
molecule tags Transferase
total genus 93
structure length 291
sequence length 291
chains with identical sequence B, C, D
ec nomenclature ec 1.2.1.38: N-acetyl-gamma-glutamyl-phosphate reductase.
pdb deposition date 2011-09-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3zzfA00
4NDQB 2BNFA 2JJXA 3S6HA 2JJ4A 3T7BA 3ZZGA 3D2MA 2WE4A 2J5VA 2V5HA 3LL9A 2J4JA 3D41A 3ZZFA 4AB7A 2OGXA 3K52A 2BRIA 2J0WA 4NDRB 2W21A 3C1NA 2VA1A 3D40A 3QVHA 4NDPA 3QUNA 4I49A 2E9YA 3AB2A 3L76A 2HMFA 1E19A 2A1FA 1GS5A 2BTYA 3LL5A 4JZ8A 1GSJA 4NDOA 4JZ7A 1YBDA 4NDPB 3K4OA 3LKKA 2CDQA 4F6TA 3EK5A 3C20A 2AP9A 3WWNA 2J0XA 2V4YA 1OHAA 2RD5A 3L86A 2AKOA 2J4LA 2JI5A 2OGXB 3ZZIA 4F6TB 2X2WA 4USJA 2J4KA 3C1MA 3D2PA 2WE5A 3S6KA 3WWMA 2J5TA 1OHBA 1B7BA 4AXSA 1OH9A 3KZFA 2BRXA 2R8VA 4NDOB 3NWYA 4JZ9A 2R98A 4Q1TA 3ZZHA 3B8GA 4KZTA 2WXBA 3U6UA 4NDRA 3AAWA 3EK6A 3AB4A 3QVFA 2BNDA 2BUFA 3S6GA 2IJ9A 4NDQA 4A7WA 3TVIA 4A7XA 4OLCA 2BNEA 3QUOA 3K56A 3QURA 3K4YA 1Z9DA 2BMUA
chains in the Genus database with same CATH superfamily
4NDQB 2BNFA 2JJXA 3S6HA 2JJ4A 3T7BA 3ZZGA 3D2MA 2WE4A 2J5VA 2V5HA 3LL9A 2J4JA 3D41A 3ZZFA 4AB7A 2OGXA 3K52A 2BRIA 2J0WA 4NDRB 2W21A 3C1NA 2VA1A 3D40A 3QVHA 4NDPA 3QUNA 4I49A 2E9YA 3AB2A 3L76A 2HMFA 1E19A 2A1FA 1GS5A 2BTYA 3LL5A 4JZ8A 1GSJA 4NDOA 4JZ7A 1YBDA 4NDPB 3K4OA 3LKKA 2CDQA 4F6TA 3EK5A 3C20A 2AP9A 3WWNA 2J0XA 2V4YA 1OHAA 2RD5A 3L86A 2AKOA 2J4LA 2JI5A 2OGXB 3ZZIA 4F6TB 2X2WA 4USJA 2J4KA 3C1MA 3D2PA 2WE5A 3S6KA 3WWMA 2J5TA 1OHBA 1B7BA 4AXSA 1OH9A 3KZFA 2BRXA 2R8VA 4NDOB 3NWYA 4JZ9A 2R98A 4Q1TA 3ZZHA 3B8GA 4KZTA 2WXBA 3U6UA 4NDRA 3AAWA 3EK6A 3AB4A 3QVFA 2BNDA 2BUFA 3S6GA 2IJ9A 4NDQA 4A7WA 3TVIA 4A7XA 4OLCA 2BNEA 3QUOA 3K56A 3QURA 3K4YA 1Z9DA 2BMUA
chains in the Genus database with same CATH topology
4NDQB 2BNFA 2JJXA 3S6HA 2JJ4A 3T7BA 3ZZGA 3D2MA 2WE4A 2J5VA 2V5HA 3LL9A 2J4JA 3D41A 3ZZFA 4AB7A 2OGXA 3K52A 2BRIA 2J0WA 4NDRB 2W21A 3C1NA 2VA1A 3D40A 3QVHA 4NDPA 3QUNA 4I49A 2E9YA 3AB2A 3L76A 2HMFA 1E19A 2A1FA 1GS5A 2BTYA 3LL5A 4JZ8A 1GSJA 4NDOA 4JZ7A 1YBDA 4NDPB 3K4OA 3LKKA 2CDQA 4F6TA 3EK5A 3C20A 2AP9A 3WWNA 2J0XA 2V4YA 1OHAA 2RD5A 3L86A 2AKOA 2J4LA 2JI5A 2OGXB 3ZZIA 4F6TB 2X2WA 4USJA 2J4KA 3C1MA 3D2PA 2WE5A 3S6KA 3WWMA 2J5TA 1OHBA 1B7BA 4AXSA 1OH9A 3KZFA 2BRXA 2R8VA 4NDOB 3NWYA 4JZ9A 2R98A 4Q1TA 3ZZHA 3B8GA 4KZTA 2WXBA 3U6UA 4NDRA 3AAWA 3EK6A 3AB4A 3QVFA 2BNDA 2BUFA 3S6GA 2IJ9A 4NDQA 4A7WA 3TVIA 4A7XA 4OLCA 2BNEA 3QUOA 3K56A 3QURA 3K4YA 1Z9DA 2BMUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4NDQ B;  2BNF A;  2JJX A;  3S6H A;  2JJ4 A;  3T7B A;  3ZZG A;  3D2M A;  2WE4 A;  2J5V A;  2V5H A;  3LL9 A;  2J4J A;  3D41 A;  3ZZF A;  4AB7 A;  2OGX A;  3K52 A;  2BRI A;  2J0W A;  4NDR B;  2W21 A;  3C1N A;  2VA1 A;  3D40 A;  3QVH A;  4NDP A;  3QUN A;  4I49 A;  2E9Y A;  3AB2 A;  3L76 A;  2HMF A;  1E19 A;  2A1F A;  1GS5 A;  2BTY A;  3LL5 A;  4JZ8 A;  1GSJ A;  4NDO A;  4JZ7 A;  1YBD A;  4NDP B;  3K4O A;  3LKK A;  2CDQ A;  4F6T A;  3EK5 A;  3C20 A;  2AP9 A;  3WWN A;  2J0X A;  2V4Y A;  1OHA A;  2RD5 A;  3L86 A;  2AKO A;  2J4L A;  2JI5 A;  2OGX B;  3ZZI A;  4F6T B;  2X2W A;  4USJ A;  2J4K A;  3C1M A;  3D2P A;  2WE5 A;  3S6K A;  3WWM A;  2J5T A;  1OHB A;  1B7B A;  4AXS A;  1OH9 A;  3KZF A;  2BRX A;  2R8V A;  4NDO B;  3NWY A;  4JZ9 A;  2R98 A;  4Q1T A;  3ZZH A;  3B8G A;  4KZT A;  2WXB A;  3U6U A;  4NDR A;  3AAW A;  3EK6 A;  3AB4 A;  3QVF A;  2BND A;  2BUF A;  3S6G A;  2IJ9 A;  4NDQ A;  4A7W A;  3TVI A;  4A7X A;  4OLC A;  2BNE A;  3QUO A;  3K56 A;  3QUR A;  3K4Y A;  1Z9D A;  2BMU A; 
#chains in the Genus database with same CATH topology
 4NDQ B;  2BNF A;  2JJX A;  3S6H A;  2JJ4 A;  3T7B A;  3ZZG A;  3D2M A;  2WE4 A;  2J5V A;  2V5H A;  3LL9 A;  2J4J A;  3D41 A;  3ZZF A;  4AB7 A;  2OGX A;  3K52 A;  2BRI A;  2J0W A;  4NDR B;  2W21 A;  3C1N A;  2VA1 A;  3D40 A;  3QVH A;  4NDP A;  3QUN A;  4I49 A;  2E9Y A;  3AB2 A;  3L76 A;  2HMF A;  1E19 A;  2A1F A;  1GS5 A;  2BTY A;  3LL5 A;  4JZ8 A;  1GSJ A;  4NDO A;  4JZ7 A;  1YBD A;  4NDP B;  3K4O A;  3LKK A;  2CDQ A;  4F6T A;  3EK5 A;  3C20 A;  2AP9 A;  3WWN A;  2J0X A;  2V4Y A;  1OHA A;  2RD5 A;  3L86 A;  2AKO A;  2J4L A;  2JI5 A;  2OGX B;  3ZZI A;  4F6T B;  2X2W A;  4USJ A;  2J4K A;  3C1M A;  3D2P A;  2WE5 A;  3S6K A;  3WWM A;  2J5T A;  1OHB A;  1B7B A;  4AXS A;  1OH9 A;  3KZF A;  2BRX A;  2R8V A;  4NDO B;  3NWY A;  4JZ9 A;  2R98 A;  4Q1T A;  3ZZH A;  3B8G A;  4KZT A;  2WXB A;  3U6U A;  4NDR A;  3AAW A;  3EK6 A;  3AB4 A;  3QVF A;  2BND A;  2BUF A;  3S6G A;  2IJ9 A;  4NDQ A;  4A7W A;  3TVI A;  4A7X A;  4OLC A;  2BNE A;  3QUO A;  3K56 A;  3QUR A;  3K4Y A;  1Z9D A;  2BMU A; 
#chains in the Genus database with same CATH homology
 4NDQ B;  2BNF A;  2JJX A;  3S6H A;  2JJ4 A;  3T7B A;  3ZZG A;  3D2M A;  2WE4 A;  2J5V A;  2V5H A;  3LL9 A;  2J4J A;  3D41 A;  3ZZF A;  4AB7 A;  2OGX A;  3K52 A;  2BRI A;  2J0W A;  4NDR B;  2W21 A;  3C1N A;  2VA1 A;  3D40 A;  3QVH A;  4NDP A;  3QUN A;  4I49 A;  2E9Y A;  3AB2 A;  3L76 A;  2HMF A;  1E19 A;  2A1F A;  1GS5 A;  2BTY A;  3LL5 A;  4JZ8 A;  1GSJ A;  4NDO A;  4JZ7 A;  1YBD A;  4NDP B;  3K4O A;  3LKK A;  2CDQ A;  4F6T A;  3EK5 A;  3C20 A;  2AP9 A;  3WWN A;  2J0X A;  2V4Y A;  1OHA A;  2RD5 A;  3L86 A;  2AKO A;  2J4L A;  2JI5 A;  2OGX B;  3ZZI A;  4F6T B;  2X2W A;  4USJ A;  2J4K A;  3C1M A;  3D2P A;  2WE5 A;  3S6K A;  3WWM A;  2J5T A;  1OHB A;  1B7B A;  4AXS A;  1OH9 A;  3KZF A;  2BRX A;  2R8V A;  4NDO B;  3NWY A;  4JZ9 A;  2R98 A;  4Q1T A;  3ZZH A;  3B8G A;  4KZT A;  2WXB A;  3U6U A;  4NDR A;  3AAW A;  3EK6 A;  3AB4 A;  3QVF A;  2BND A;  2BUF A;  3S6G A;  2IJ9 A;  4NDQ A;  4A7W A;  3TVI A;  4A7X A;  4OLC A;  2BNE A;  3QUO A;  3K56 A;  3QUR A;  3K4Y A;  1Z9D A;  2BMU A; 
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