3ZZFA

Crystal structure of the amino acid kinase domain from saccharomyces cerevisiae acetylglutamate kinase complexed with its substrate n- acetylglutamate
Total Genus 93
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
93
sequence length
291
structure length
291
Chain Sequence
NGFSATRSTVIQLLNNISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTALEQLGVRARPITSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRGY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
pubmed doi rcsb
source organism Saccharomyces cerevisiae
total genus 93
structure length 291
sequence length 291
chains with identical sequence B, C, D
ec nomenclature ec 1.2.1.38: N-acetyl-gamma-glutamyl-phosphate reductase.
pdb deposition date 2011-09-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3zzfA00
3D2MA 3K56A 2JI5A 4USJA 3TVIA 3C1MA 2J4KA 2BMUA 3QURA 3C20A 4NDRB 4A7WA 2E9YA 3QUOA 3L86A 2BNFA 4JZ8A 2RD5A 4AB7A 3K52A 1B7BA 2BUFA 4F6TA 3ZZFA 1GS5A 2BRIA 1Z9DA 3AB2A 4OLCA 2A1FA 3EK6A 1OH9A 4A7XA 4NDRA 4JZ9A 4Q1TA 3B8GA 2J4LA 4JZ7A 2BTYA 3WWNA 3S6GA 3U6UA 2VA1A 3LL5A 2WE5A 4NDOB 2V4YA 3KZFA 3LL9A 2CDQA 2V5HA 3ZZIA 2BRXA 3L76A 3ZZGA 4AXSA 3S6HA 2X2WA 2R8VA 2BNDA 3S6KA 3K4YA 2IJ9A 3ZZHA 2JJXA 3QVFA 2J0WA 3D40A 3QVHA 2J4JA 4NDOA 1YBDA 3C1NA 2J5TA 3AAWA 2JJ4A 2J5VA 1OHAA 4NDQB 4NDPB 3T7BA 2AP9A 2HMFA 2WE4A 1GSJA 2J0XA 3EK5A 3K4OA 2AKOA 3AB4A 4I49A 2WXBA 1OHBA 2OGXA 4KZTA 1E19A 2R98A 2W21A 4NDQA 4NDPA 2OGXB 3WWMA 2BNEA 3D2PA 3NWYA 3D41A 3LKKA 4F6TB 3QUNA
chains in the Genus database with same CATH superfamily
3D2MA 3K56A 2JI5A 4USJA 3TVIA 3C1MA 2J4KA 2BMUA 3QURA 3C20A 4NDRB 4A7WA 2E9YA 3QUOA 3L86A 2BNFA 4JZ8A 2RD5A 4AB7A 3K52A 1B7BA 2BUFA 4F6TA 3ZZFA 1GS5A 2BRIA 1Z9DA 3AB2A 4OLCA 2A1FA 3EK6A 1OH9A 4A7XA 4NDRA 4JZ9A 4Q1TA 3B8GA 2J4LA 4JZ7A 2BTYA 3WWNA 3S6GA 3U6UA 2VA1A 3LL5A 2WE5A 4NDOB 2V4YA 3KZFA 3LL9A 2CDQA 2V5HA 3ZZIA 2BRXA 3L76A 3ZZGA 4AXSA 3S6HA 2X2WA 2R8VA 2BNDA 3S6KA 3K4YA 2IJ9A 3ZZHA 2JJXA 3QVFA 2J0WA 3D40A 3QVHA 2J4JA 4NDOA 1YBDA 3C1NA 2J5TA 3AAWA 2JJ4A 2J5VA 1OHAA 4NDQB 4NDPB 3T7BA 2AP9A 2HMFA 2WE4A 1GSJA 2J0XA 3EK5A 3K4OA 2AKOA 3AB4A 4I49A 2WXBA 1OHBA 2OGXA 4KZTA 1E19A 2R98A 2W21A 4NDQA 4NDPA 2OGXB 3WWMA 2BNEA 3D2PA 3NWYA 3D41A 3LKKA 4F6TB 3QUNA
chains in the Genus database with same CATH topology
3D2MA 3K56A 2JI5A 4USJA 3TVIA 3C1MA 2J4KA 2BMUA 3QURA 3C20A 4NDRB 4A7WA 2E9YA 3QUOA 3L86A 2BNFA 4JZ8A 2RD5A 4AB7A 3K52A 1B7BA 2BUFA 4F6TA 3ZZFA 1GS5A 2BRIA 1Z9DA 3AB2A 4OLCA 2A1FA 3EK6A 1OH9A 4A7XA 4NDRA 4JZ9A 4Q1TA 3B8GA 2J4LA 4JZ7A 2BTYA 3WWNA 3S6GA 3U6UA 2VA1A 3LL5A 2WE5A 4NDOB 2V4YA 3KZFA 3LL9A 2CDQA 2V5HA 3ZZIA 2BRXA 3L76A 3ZZGA 4AXSA 3S6HA 2X2WA 2R8VA 2BNDA 3S6KA 3K4YA 2IJ9A 3ZZHA 2JJXA 3QVFA 2J0WA 3D40A 3QVHA 2J4JA 4NDOA 1YBDA 3C1NA 2J5TA 3AAWA 2JJ4A 2J5VA 1OHAA 4NDQB 4NDPB 3T7BA 2AP9A 2HMFA 2WE4A 1GSJA 2J0XA 3EK5A 3K4OA 2AKOA 3AB4A 4I49A 2WXBA 1OHBA 2OGXA 4KZTA 1E19A 2R98A 2W21A 4NDQA 4NDPA 2OGXB 3WWMA 2BNEA 3D2PA 3NWYA 3D41A 3LKKA 4F6TB 3QUNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3D2M A;  3K56 A;  2JI5 A;  4USJ A;  3TVI A;  3C1M A;  2J4K A;  2BMU A;  3QUR A;  3C20 A;  4NDR B;  4A7W A;  2E9Y A;  3QUO A;  3L86 A;  2BNF A;  4JZ8 A;  2RD5 A;  4AB7 A;  3K52 A;  1B7B A;  2BUF A;  4F6T A;  3ZZF A;  1GS5 A;  2BRI A;  1Z9D A;  3AB2 A;  4OLC A;  2A1F A;  3EK6 A;  1OH9 A;  4A7X A;  4NDR A;  4JZ9 A;  4Q1T A;  3B8G A;  2J4L A;  4JZ7 A;  2BTY A;  3WWN A;  3S6G A;  3U6U A;  2VA1 A;  3LL5 A;  2WE5 A;  4NDO B;  2V4Y A;  3KZF A;  3LL9 A;  2CDQ A;  2V5H A;  3ZZI A;  2BRX A;  3L76 A;  3ZZG A;  4AXS A;  3S6H A;  2X2W A;  2R8V A;  2BND A;  3S6K A;  3K4Y A;  2IJ9 A;  3ZZH A;  2JJX A;  3QVF A;  2J0W A;  3D40 A;  3QVH A;  2J4J A;  4NDO A;  1YBD A;  3C1N A;  2J5T A;  3AAW A;  2JJ4 A;  2J5V A;  1OHA A;  4NDQ B;  4NDP B;  3T7B A;  2AP9 A;  2HMF A;  2WE4 A;  1GSJ A;  2J0X A;  3EK5 A;  3K4O A;  2AKO A;  3AB4 A;  4I49 A;  2WXB A;  1OHB A;  2OGX A;  4KZT A;  1E19 A;  2R98 A;  2W21 A;  4NDQ A;  4NDP A;  2OGX B;  3WWM A;  2BNE A;  3D2P A;  3NWY A;  3D41 A;  3LKK A;  4F6T B;  3QUN A; 
#chains in the Genus database with same CATH topology
 3D2M A;  3K56 A;  2JI5 A;  4USJ A;  3TVI A;  3C1M A;  2J4K A;  2BMU A;  3QUR A;  3C20 A;  4NDR B;  4A7W A;  2E9Y A;  3QUO A;  3L86 A;  2BNF A;  4JZ8 A;  2RD5 A;  4AB7 A;  3K52 A;  1B7B A;  2BUF A;  4F6T A;  3ZZF A;  1GS5 A;  2BRI A;  1Z9D A;  3AB2 A;  4OLC A;  2A1F A;  3EK6 A;  1OH9 A;  4A7X A;  4NDR A;  4JZ9 A;  4Q1T A;  3B8G A;  2J4L A;  4JZ7 A;  2BTY A;  3WWN A;  3S6G A;  3U6U A;  2VA1 A;  3LL5 A;  2WE5 A;  4NDO B;  2V4Y A;  3KZF A;  3LL9 A;  2CDQ A;  2V5H A;  3ZZI A;  2BRX A;  3L76 A;  3ZZG A;  4AXS A;  3S6H A;  2X2W A;  2R8V A;  2BND A;  3S6K A;  3K4Y A;  2IJ9 A;  3ZZH A;  2JJX A;  3QVF A;  2J0W A;  3D40 A;  3QVH A;  2J4J A;  4NDO A;  1YBD A;  3C1N A;  2J5T A;  3AAW A;  2JJ4 A;  2J5V A;  1OHA A;  4NDQ B;  4NDP B;  3T7B A;  2AP9 A;  2HMF A;  2WE4 A;  1GSJ A;  2J0X A;  3EK5 A;  3K4O A;  2AKO A;  3AB4 A;  4I49 A;  2WXB A;  1OHB A;  2OGX A;  4KZT A;  1E19 A;  2R98 A;  2W21 A;  4NDQ A;  4NDP A;  2OGX B;  3WWM A;  2BNE A;  3D2P A;  3NWY A;  3D41 A;  3LKK A;  4F6T B;  3QUN A; 
#chains in the Genus database with same CATH homology
 3D2M A;  3K56 A;  2JI5 A;  4USJ A;  3TVI A;  3C1M A;  2J4K A;  2BMU A;  3QUR A;  3C20 A;  4NDR B;  4A7W A;  2E9Y A;  3QUO A;  3L86 A;  2BNF A;  4JZ8 A;  2RD5 A;  4AB7 A;  3K52 A;  1B7B A;  2BUF A;  4F6T A;  3ZZF A;  1GS5 A;  2BRI A;  1Z9D A;  3AB2 A;  4OLC A;  2A1F A;  3EK6 A;  1OH9 A;  4A7X A;  4NDR A;  4JZ9 A;  4Q1T A;  3B8G A;  2J4L A;  4JZ7 A;  2BTY A;  3WWN A;  3S6G A;  3U6U A;  2VA1 A;  3LL5 A;  2WE5 A;  4NDO B;  2V4Y A;  3KZF A;  3LL9 A;  2CDQ A;  2V5H A;  3ZZI A;  2BRX A;  3L76 A;  3ZZG A;  4AXS A;  3S6H A;  2X2W A;  2R8V A;  2BND A;  3S6K A;  3K4Y A;  2IJ9 A;  3ZZH A;  2JJX A;  3QVF A;  2J0W A;  3D40 A;  3QVH A;  2J4J A;  4NDO A;  1YBD A;  3C1N A;  2J5T A;  3AAW A;  2JJ4 A;  2J5V A;  1OHA A;  4NDQ B;  4NDP B;  3T7B A;  2AP9 A;  2HMF A;  2WE4 A;  1GSJ A;  2J0X A;  3EK5 A;  3K4O A;  2AKO A;  3AB4 A;  4I49 A;  2WXB A;  1OHB A;  2OGX A;  4KZT A;  1E19 A;  2R98 A;  2W21 A;  4NDQ A;  4NDP A;  2OGX B;  3WWM A;  2BNE A;  3D2P A;  3NWY A;  3D41 A;  3LKK A;  4F6T B;  3QUN A; 
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similar chains in the Genus database (?% sequence similarity)
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