3ZZFA

Crystal structure of the amino acid kinase domain from saccharomyces cerevisiae acetylglutamate kinase complexed with its substrate n- acetylglutamate
Total Genus 93
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
93
sequence length
291
structure length
291
Chain Sequence
NGFSATRSTVIQLLNNISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTALEQLGVRARPITSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRGY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
source organism Saccharomyces cerevisiae
publication title Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
total genus 93
structure length 291
sequence length 291
chains with identical sequence B, C, D
ec nomenclature ec 1.2.1.38: N-acetyl-gamma-glutamyl-phosphate reductase.
pdb deposition date 2011-09-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3zzfA00
2BNDA 3QVFA 2AP9A 3LKKA 2RD5A 4USJA 4JZ7A 3B8GA 2J5VA 2BRXA 3D41A 1OHBA 4Q1TA 4NDPA 3S6KA 3EK6A 2WE5A 3LL5A 3NWYA 3ZZIA 2A1FA 4JZ9A 1Z9DA 3L76A 4JZ8A 2BNFA 1GS5A 3ZZFA 3EK5A 3D2MA 3QVHA 3U6UA 2W21A 2IJ9A 3D40A 2BNEA 2J5TA 3T7BA 3C20A 3S6HA 4NDPB 3C1NA 3K4OA 4OLCA 3AB4A 2VA1A 2BUFA 2V5HA 3K52A 4I49A 2BMUA 1YBDA 2OGXA 2HMFA 4A7WA 3C1MA 3K56A 2OGXB 4NDRA 1OHAA 2J4LA 2JJXA 4NDOA 3WWNA 2J0WA 2JI5A 2R98A 2CDQA 2E9YA 4F6TA 4AB7A 4NDOB 3ZZHA 3D2PA 3ZZGA 3QURA 4A7XA 3QUOA 1GSJA 3L86A 3LL9A 2R8VA 4KZTA 1E19A 2V4YA 3KZFA 1B7BA 3QUNA 2J4JA 4NDQA 1OH9A 3TVIA 4NDQB 3AB2A 3S6GA 4NDRB 3K4YA 3WWMA 2WE4A 2BRIA 2WXBA 4F6TB 2J4KA 4AXSA 3AAWA 2JJ4A 2X2WA 2AKOA 2BTYA 2J0XA
chains in the Genus database with same CATH superfamily
2BNDA 3QVFA 2AP9A 3LKKA 2RD5A 4USJA 4JZ7A 3B8GA 2J5VA 2BRXA 3D41A 1OHBA 4Q1TA 4NDPA 3S6KA 3EK6A 2WE5A 3LL5A 3NWYA 3ZZIA 2A1FA 4JZ9A 1Z9DA 3L76A 4JZ8A 2BNFA 1GS5A 3ZZFA 3EK5A 3D2MA 3QVHA 3U6UA 2W21A 2IJ9A 3D40A 2BNEA 2J5TA 3T7BA 3C20A 3S6HA 4NDPB 3C1NA 3K4OA 4OLCA 3AB4A 2VA1A 2BUFA 2V5HA 3K52A 4I49A 2BMUA 1YBDA 2OGXA 2HMFA 4A7WA 3C1MA 3K56A 2OGXB 4NDRA 1OHAA 2J4LA 2JJXA 4NDOA 3WWNA 2J0WA 2JI5A 2R98A 2CDQA 2E9YA 4F6TA 4AB7A 4NDOB 3ZZHA 3D2PA 3ZZGA 3QURA 4A7XA 3QUOA 1GSJA 3L86A 3LL9A 2R8VA 4KZTA 1E19A 2V4YA 3KZFA 1B7BA 3QUNA 2J4JA 4NDQA 1OH9A 3TVIA 4NDQB 3AB2A 3S6GA 4NDRB 3K4YA 3WWMA 2WE4A 2BRIA 2WXBA 4F6TB 2J4KA 4AXSA 3AAWA 2JJ4A 2X2WA 2AKOA 2BTYA 2J0XA
chains in the Genus database with same CATH topology
2BNDA 3QVFA 2AP9A 3LKKA 2RD5A 4USJA 4JZ7A 3B8GA 2J5VA 2BRXA 3D41A 1OHBA 4Q1TA 4NDPA 3S6KA 3EK6A 2WE5A 3LL5A 3NWYA 3ZZIA 2A1FA 4JZ9A 1Z9DA 3L76A 4JZ8A 2BNFA 1GS5A 3ZZFA 3EK5A 3D2MA 3QVHA 3U6UA 2W21A 2IJ9A 3D40A 2BNEA 2J5TA 3T7BA 3C20A 3S6HA 4NDPB 3C1NA 3K4OA 4OLCA 3AB4A 2VA1A 2BUFA 2V5HA 3K52A 4I49A 2BMUA 1YBDA 2OGXA 2HMFA 4A7WA 3C1MA 3K56A 2OGXB 4NDRA 1OHAA 2J4LA 2JJXA 4NDOA 3WWNA 2J0WA 2JI5A 2R98A 2CDQA 2E9YA 4F6TA 4AB7A 4NDOB 3ZZHA 3D2PA 3ZZGA 3QURA 4A7XA 3QUOA 1GSJA 3L86A 3LL9A 2R8VA 4KZTA 1E19A 2V4YA 3KZFA 1B7BA 3QUNA 2J4JA 4NDQA 1OH9A 3TVIA 4NDQB 3AB2A 3S6GA 4NDRB 3K4YA 3WWMA 2WE4A 2BRIA 2WXBA 4F6TB 2J4KA 4AXSA 3AAWA 2JJ4A 2X2WA 2AKOA 2BTYA 2J0XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BND A;  3QVF A;  2AP9 A;  3LKK A;  2RD5 A;  4USJ A;  4JZ7 A;  3B8G A;  2J5V A;  2BRX A;  3D41 A;  1OHB A;  4Q1T A;  4NDP A;  3S6K A;  3EK6 A;  2WE5 A;  3LL5 A;  3NWY A;  3ZZI A;  2A1F A;  4JZ9 A;  1Z9D A;  3L76 A;  4JZ8 A;  2BNF A;  1GS5 A;  3ZZF A;  3EK5 A;  3D2M A;  3QVH A;  3U6U A;  2W21 A;  2IJ9 A;  3D40 A;  2BNE A;  2J5T A;  3T7B A;  3C20 A;  3S6H A;  4NDP B;  3C1N A;  3K4O A;  4OLC A;  3AB4 A;  2VA1 A;  2BUF A;  2V5H A;  3K52 A;  4I49 A;  2BMU A;  1YBD A;  2OGX A;  2HMF A;  4A7W A;  3C1M A;  3K56 A;  2OGX B;  4NDR A;  1OHA A;  2J4L A;  2JJX A;  4NDO A;  3WWN A;  2J0W A;  2JI5 A;  2R98 A;  2CDQ A;  2E9Y A;  4F6T A;  4AB7 A;  4NDO B;  3ZZH A;  3D2P A;  3ZZG A;  3QUR A;  4A7X A;  3QUO A;  1GSJ A;  3L86 A;  3LL9 A;  2R8V A;  4KZT A;  1E19 A;  2V4Y A;  3KZF A;  1B7B A;  3QUN A;  2J4J A;  4NDQ A;  1OH9 A;  3TVI A;  4NDQ B;  3AB2 A;  3S6G A;  4NDR B;  3K4Y A;  3WWM A;  2WE4 A;  2BRI A;  2WXB A;  4F6T B;  2J4K A;  4AXS A;  3AAW A;  2JJ4 A;  2X2W A;  2AKO A;  2BTY A;  2J0X A; 
#chains in the Genus database with same CATH topology
 2BND A;  3QVF A;  2AP9 A;  3LKK A;  2RD5 A;  4USJ A;  4JZ7 A;  3B8G A;  2J5V A;  2BRX A;  3D41 A;  1OHB A;  4Q1T A;  4NDP A;  3S6K A;  3EK6 A;  2WE5 A;  3LL5 A;  3NWY A;  3ZZI A;  2A1F A;  4JZ9 A;  1Z9D A;  3L76 A;  4JZ8 A;  2BNF A;  1GS5 A;  3ZZF A;  3EK5 A;  3D2M A;  3QVH A;  3U6U A;  2W21 A;  2IJ9 A;  3D40 A;  2BNE A;  2J5T A;  3T7B A;  3C20 A;  3S6H A;  4NDP B;  3C1N A;  3K4O A;  4OLC A;  3AB4 A;  2VA1 A;  2BUF A;  2V5H A;  3K52 A;  4I49 A;  2BMU A;  1YBD A;  2OGX A;  2HMF A;  4A7W A;  3C1M A;  3K56 A;  2OGX B;  4NDR A;  1OHA A;  2J4L A;  2JJX A;  4NDO A;  3WWN A;  2J0W A;  2JI5 A;  2R98 A;  2CDQ A;  2E9Y A;  4F6T A;  4AB7 A;  4NDO B;  3ZZH A;  3D2P A;  3ZZG A;  3QUR A;  4A7X A;  3QUO A;  1GSJ A;  3L86 A;  3LL9 A;  2R8V A;  4KZT A;  1E19 A;  2V4Y A;  3KZF A;  1B7B A;  3QUN A;  2J4J A;  4NDQ A;  1OH9 A;  3TVI A;  4NDQ B;  3AB2 A;  3S6G A;  4NDR B;  3K4Y A;  3WWM A;  2WE4 A;  2BRI A;  2WXB A;  4F6T B;  2J4K A;  4AXS A;  3AAW A;  2JJ4 A;  2X2W A;  2AKO A;  2BTY A;  2J0X A; 
#chains in the Genus database with same CATH homology
 2BND A;  3QVF A;  2AP9 A;  3LKK A;  2RD5 A;  4USJ A;  4JZ7 A;  3B8G A;  2J5V A;  2BRX A;  3D41 A;  1OHB A;  4Q1T A;  4NDP A;  3S6K A;  3EK6 A;  2WE5 A;  3LL5 A;  3NWY A;  3ZZI A;  2A1F A;  4JZ9 A;  1Z9D A;  3L76 A;  4JZ8 A;  2BNF A;  1GS5 A;  3ZZF A;  3EK5 A;  3D2M A;  3QVH A;  3U6U A;  2W21 A;  2IJ9 A;  3D40 A;  2BNE A;  2J5T A;  3T7B A;  3C20 A;  3S6H A;  4NDP B;  3C1N A;  3K4O A;  4OLC A;  3AB4 A;  2VA1 A;  2BUF A;  2V5H A;  3K52 A;  4I49 A;  2BMU A;  1YBD A;  2OGX A;  2HMF A;  4A7W A;  3C1M A;  3K56 A;  2OGX B;  4NDR A;  1OHA A;  2J4L A;  2JJX A;  4NDO A;  3WWN A;  2J0W A;  2JI5 A;  2R98 A;  2CDQ A;  2E9Y A;  4F6T A;  4AB7 A;  4NDO B;  3ZZH A;  3D2P A;  3ZZG A;  3QUR A;  4A7X A;  3QUO A;  1GSJ A;  3L86 A;  3LL9 A;  2R8V A;  4KZT A;  1E19 A;  2V4Y A;  3KZF A;  1B7B A;  3QUN A;  2J4J A;  4NDQ A;  1OH9 A;  3TVI A;  4NDQ B;  3AB2 A;  3S6G A;  4NDR B;  3K4Y A;  3WWM A;  2WE4 A;  2BRI A;  2WXB A;  4F6T B;  2J4K A;  4AXS A;  3AAW A;  2JJ4 A;  2X2W A;  2AKO A;  2BTY A;  2J0X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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