3L76A

Crystal structure of aspartate kinase from synechocystis
Total Genus 176
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
176
sequence length
599
structure length
585
Chain Sequence
ALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPNPCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEILEIRPDRLEHHLREGKVVVVAGFQGIHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTLSPPKNQTDLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLDAAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIATSEIKISCVVPQDRGVDALKAAHSAFNLAGTKTVTVPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Aspartokinase
publication title A new mode of dimerization of allosteric enzymes with ACT domains revealed by the crystal structure of the aspartate kinase from Cyanobacteria
pubmed doi rcsb
source organism Synechocystis
molecule tags Transferase
total genus 176
structure length 585
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2009-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
A PF13840 ACT_7 ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3l76A01
4JZ7A 3QUOA 4KZTA 3QVHA 2R8VA 2WXBA 3T7BA 1Z9DA 2BUFA 4NDOB 3U6UA 4F6TA 4NDRB 3LL5A 3QURA 3D2MA 4OLCA 4USJA 2JJXA 3ZZHA 4NDOA 4NDPB 3ZZIA 2OGXB 2WE5A 3ZZGA 3K4YA 1GS5A 4JZ8A 2E9YA 3C1MA 2BRXA 4A7WA 3C1NA 3EK6A 2HMFA 3QUNA 3K52A 2A1FA 2R98A 2J4LA 2VA1A 3LKKA 2BNDA 1GSJA 4NDRA 3S6HA 2AKOA 2J0XA 3C20A 4NDPA 3S6GA 2RD5A 3B8GA 4JZ9A 2OGXA 2J4KA 2BNEA 3QVFA 1OHAA 4AXSA 1E19A 4Q1TA 3NWYA 2J0WA 3K56A 2WE4A 2BTYA 1OHBA 3AB2A 3L76A 3D41A 1OH9A 2BRIA 3K4OA 3TVIA 2J5VA 4F6TB 2J5TA 3D2PA 3WWMA 2CDQA 3AB4A 3LL9A 4NDQB 2IJ9A 2BNFA 2V5HA 1B7BA 4I49A 3KZFA 3S6KA 1YBDA 4NDQA 2V4YA 2X2WA 2JJ4A 3WWNA 3EK5A 4AB7A 3ZZFA 2BMUA 2JI5A 3L86A 3D40A 3AAWA 2W21A 2J4JA 4A7XA 2AP9A
chains in the Genus database with same CATH superfamily
4JZ7A 3QUOA 4KZTA 3QVHA 2R8VA 2WXBA 3T7BA 1Z9DA 2BUFA 4NDOB 3U6UA 4F6TA 4NDRB 3LL5A 3QURA 3D2MA 4OLCA 4USJA 2JJXA 3ZZHA 4NDOA 4NDPB 3ZZIA 2OGXB 2WE5A 3ZZGA 3K4YA 1GS5A 4JZ8A 2E9YA 3C1MA 2BRXA 4A7WA 3C1NA 3EK6A 2HMFA 3QUNA 3K52A 2A1FA 2R98A 2J4LA 2VA1A 3LKKA 2BNDA 1GSJA 4NDRA 3S6HA 2AKOA 2J0XA 3C20A 4NDPA 3S6GA 2RD5A 3B8GA 4JZ9A 2OGXA 2J4KA 2BNEA 3QVFA 1OHAA 4AXSA 1E19A 4Q1TA 3NWYA 2J0WA 3K56A 2WE4A 2BTYA 1OHBA 3AB2A 3L76A 3D41A 1OH9A 2BRIA 3K4OA 3TVIA 2J5VA 4F6TB 2J5TA 3D2PA 3WWMA 2CDQA 3AB4A 3LL9A 4NDQB 2IJ9A 2BNFA 2V5HA 1B7BA 4I49A 3KZFA 3S6KA 1YBDA 4NDQA 2V4YA 2X2WA 2JJ4A 3WWNA 3EK5A 4AB7A 3ZZFA 2BMUA 2JI5A 3L86A 3D40A 3AAWA 2W21A 2J4JA 4A7XA 2AP9A
chains in the Genus database with same CATH topology
4JZ7A 3QUOA 4KZTA 3QVHA 2R8VA 2WXBA 3T7BA 1Z9DA 2BUFA 4NDOB 3U6UA 4F6TA 4NDRB 3LL5A 3QURA 3D2MA 4OLCA 4USJA 2JJXA 3ZZHA 4NDOA 4NDPB 3ZZIA 2OGXB 2WE5A 3ZZGA 3K4YA 1GS5A 4JZ8A 2E9YA 3C1MA 2BRXA 4A7WA 3C1NA 3EK6A 2HMFA 3QUNA 3K52A 2A1FA 2R98A 2J4LA 2VA1A 3LKKA 2BNDA 1GSJA 4NDRA 3S6HA 2AKOA 2J0XA 3C20A 4NDPA 3S6GA 2RD5A 3B8GA 4JZ9A 2OGXA 2J4KA 2BNEA 3QVFA 1OHAA 4AXSA 1E19A 4Q1TA 3NWYA 2J0WA 3K56A 2WE4A 2BTYA 1OHBA 3AB2A 3L76A 3D41A 1OH9A 2BRIA 3K4OA 3TVIA 2J5VA 4F6TB 2J5TA 3D2PA 3WWMA 2CDQA 3AB4A 3LL9A 4NDQB 2IJ9A 2BNFA 2V5HA 1B7BA 4I49A 3KZFA 3S6KA 1YBDA 4NDQA 2V4YA 2X2WA 2JJ4A 3WWNA 3EK5A 4AB7A 3ZZFA 2BMUA 2JI5A 3L86A 3D40A 3AAWA 2W21A 2J4JA 4A7XA 2AP9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JZ7 A;  3QUO A;  4KZT A;  3QVH A;  2R8V A;  2WXB A;  3T7B A;  1Z9D A;  2BUF A;  4NDO B;  3U6U A;  4F6T A;  4NDR B;  3LL5 A;  3QUR A;  3D2M A;  4OLC A;  4USJ A;  2JJX A;  3ZZH A;  4NDO A;  4NDP B;  3ZZI A;  2OGX B;  2WE5 A;  3ZZG A;  3K4Y A;  1GS5 A;  4JZ8 A;  2E9Y A;  3C1M A;  2BRX A;  4A7W A;  3C1N A;  3EK6 A;  2HMF A;  3QUN A;  3K52 A;  2A1F A;  2R98 A;  2J4L A;  2VA1 A;  3LKK A;  2BND A;  1GSJ A;  4NDR A;  3S6H A;  2AKO A;  2J0X A;  3C20 A;  4NDP A;  3S6G A;  2RD5 A;  3B8G A;  4JZ9 A;  2OGX A;  2J4K A;  2BNE A;  3QVF A;  1OHA A;  4AXS A;  1E19 A;  4Q1T A;  3NWY A;  2J0W A;  3K56 A;  2WE4 A;  2BTY A;  1OHB A;  3AB2 A;  3L76 A;  3D41 A;  1OH9 A;  2BRI A;  3K4O A;  3TVI A;  2J5V A;  4F6T B;  2J5T A;  3D2P A;  3WWM A;  2CDQ A;  3AB4 A;  3LL9 A;  4NDQ B;  2IJ9 A;  2BNF A;  2V5H A;  1B7B A;  4I49 A;  3KZF A;  3S6K A;  1YBD A;  4NDQ A;  2V4Y A;  2X2W A;  2JJ4 A;  3WWN A;  3EK5 A;  4AB7 A;  3ZZF A;  2BMU A;  2JI5 A;  3L86 A;  3D40 A;  3AAW A;  2W21 A;  2J4J A;  4A7X A;  2AP9 A; 
#chains in the Genus database with same CATH topology
 4JZ7 A;  3QUO A;  4KZT A;  3QVH A;  2R8V A;  2WXB A;  3T7B A;  1Z9D A;  2BUF A;  4NDO B;  3U6U A;  4F6T A;  4NDR B;  3LL5 A;  3QUR A;  3D2M A;  4OLC A;  4USJ A;  2JJX A;  3ZZH A;  4NDO A;  4NDP B;  3ZZI A;  2OGX B;  2WE5 A;  3ZZG A;  3K4Y A;  1GS5 A;  4JZ8 A;  2E9Y A;  3C1M A;  2BRX A;  4A7W A;  3C1N A;  3EK6 A;  2HMF A;  3QUN A;  3K52 A;  2A1F A;  2R98 A;  2J4L A;  2VA1 A;  3LKK A;  2BND A;  1GSJ A;  4NDR A;  3S6H A;  2AKO A;  2J0X A;  3C20 A;  4NDP A;  3S6G A;  2RD5 A;  3B8G A;  4JZ9 A;  2OGX A;  2J4K A;  2BNE A;  3QVF A;  1OHA A;  4AXS A;  1E19 A;  4Q1T A;  3NWY A;  2J0W A;  3K56 A;  2WE4 A;  2BTY A;  1OHB A;  3AB2 A;  3L76 A;  3D41 A;  1OH9 A;  2BRI A;  3K4O A;  3TVI A;  2J5V A;  4F6T B;  2J5T A;  3D2P A;  3WWM A;  2CDQ A;  3AB4 A;  3LL9 A;  4NDQ B;  2IJ9 A;  2BNF A;  2V5H A;  1B7B A;  4I49 A;  3KZF A;  3S6K A;  1YBD A;  4NDQ A;  2V4Y A;  2X2W A;  2JJ4 A;  3WWN A;  3EK5 A;  4AB7 A;  3ZZF A;  2BMU A;  2JI5 A;  3L86 A;  3D40 A;  3AAW A;  2W21 A;  2J4J A;  4A7X A;  2AP9 A; 
#chains in the Genus database with same CATH homology
 4JZ7 A;  3QUO A;  4KZT A;  3QVH A;  2R8V A;  2WXB A;  3T7B A;  1Z9D A;  2BUF A;  4NDO B;  3U6U A;  4F6T A;  4NDR B;  3LL5 A;  3QUR A;  3D2M A;  4OLC A;  4USJ A;  2JJX A;  3ZZH A;  4NDO A;  4NDP B;  3ZZI A;  2OGX B;  2WE5 A;  3ZZG A;  3K4Y A;  1GS5 A;  4JZ8 A;  2E9Y A;  3C1M A;  2BRX A;  4A7W A;  3C1N A;  3EK6 A;  2HMF A;  3QUN A;  3K52 A;  2A1F A;  2R98 A;  2J4L A;  2VA1 A;  3LKK A;  2BND A;  1GSJ A;  4NDR A;  3S6H A;  2AKO A;  2J0X A;  3C20 A;  4NDP A;  3S6G A;  2RD5 A;  3B8G A;  4JZ9 A;  2OGX A;  2J4K A;  2BNE A;  3QVF A;  1OHA A;  4AXS A;  1E19 A;  4Q1T A;  3NWY A;  2J0W A;  3K56 A;  2WE4 A;  2BTY A;  1OHB A;  3AB2 A;  3L76 A;  3D41 A;  1OH9 A;  2BRI A;  3K4O A;  3TVI A;  2J5V A;  4F6T B;  2J5T A;  3D2P A;  3WWM A;  2CDQ A;  3AB4 A;  3LL9 A;  4NDQ B;  2IJ9 A;  2BNF A;  2V5H A;  1B7B A;  4I49 A;  3KZF A;  3S6K A;  1YBD A;  4NDQ A;  2V4Y A;  2X2W A;  2JJ4 A;  3WWN A;  3EK5 A;  4AB7 A;  3ZZF A;  2BMU A;  2JI5 A;  3L86 A;  3D40 A;  3AAW A;  2W21 A;  2J4J A;  4A7X A;  2AP9 A; 
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similar chains in the pdb database (?% sequence similarity)

 
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