3L76A

Crystal structure of aspartate kinase from synechocystis
Total Genus 176
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
176
sequence length
599
structure length
585
Chain Sequence
ALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPNPCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEILEIRPDRLEHHLREGKVVVVAGFQGIHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTLSPPKNQTDLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLDAAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIATSEIKISCVVPQDRGVDALKAAHSAFNLAGTKTVTVPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title A new mode of dimerization of allosteric enzymes with ACT domains revealed by the crystal structure of the aspartate kinase from Cyanobacteria
pubmed doi rcsb
source organism Synechocystis
molecule tags Transferase
molecule keywords Aspartokinase
total genus 176
structure length 585
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2009-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
A PF13840 ACT_7 ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3l76A01
2AKOA 2R98A 4NDQB 3ZZFA 2CDQA 4USJA 2WE5A 2WE4A 4AXSA 1Z9DA 2R8VA 4NDRB 3K4OA 2X2WA 3AAWA 3K56A 2BNEA 1E19A 3EK5A 3U6UA 2WXBA 3QURA 1GS5A 3LKKA 2VA1A 2J5VA 2HMFA 1B7BA 1YBDA 2JI5A 3LL9A 2JJXA 4F6TB 2V5HA 2BMUA 3L86A 4I49A 4OLCA 3ZZGA 2BRIA 3S6KA 4NDOB 3B8GA 2BUFA 3C1MA 3C20A 3AB4A 4A7WA 3WWMA 3AB2A 2BTYA 3S6GA 2W21A 3L76A 1OH9A 4JZ9A 3NWYA 4NDPB 2OGXB 3T7BA 2BRXA 2A1FA 3K4YA 4JZ8A 2OGXA 3C1NA 4Q1TA 3QVFA 3D2PA 3QUNA 4A7XA 4NDPA 3LL5A 4NDQA 2J5TA 2AP9A 2J0WA 2BNFA 1GSJA 1OHAA 2IJ9A 2J4LA 2E9YA 2J0XA 3D40A 4F6TA 2RD5A 3KZFA 2J4KA 3ZZIA 4JZ7A 3S6HA 3ZZHA 1OHBA 3D2MA 3QVHA 2JJ4A 4KZTA 3WWNA 2V4YA 4NDOA 2J4JA 3QUOA 3EK6A 3K52A 2BNDA 3TVIA 4NDRA 4AB7A 3D41A
chains in the Genus database with same CATH superfamily
2AKOA 2R98A 4NDQB 3ZZFA 2CDQA 4USJA 2WE5A 2WE4A 4AXSA 1Z9DA 2R8VA 4NDRB 3K4OA 2X2WA 3AAWA 3K56A 2BNEA 1E19A 3EK5A 3U6UA 2WXBA 3QURA 1GS5A 3LKKA 2VA1A 2J5VA 2HMFA 1B7BA 1YBDA 2JI5A 3LL9A 2JJXA 4F6TB 2V5HA 2BMUA 3L86A 4I49A 4OLCA 3ZZGA 2BRIA 3S6KA 4NDOB 3B8GA 2BUFA 3C1MA 3C20A 3AB4A 4A7WA 3WWMA 3AB2A 2BTYA 3S6GA 2W21A 3L76A 1OH9A 4JZ9A 3NWYA 4NDPB 2OGXB 3T7BA 2BRXA 2A1FA 3K4YA 4JZ8A 2OGXA 3C1NA 4Q1TA 3QVFA 3D2PA 3QUNA 4A7XA 4NDPA 3LL5A 4NDQA 2J5TA 2AP9A 2J0WA 2BNFA 1GSJA 1OHAA 2IJ9A 2J4LA 2E9YA 2J0XA 3D40A 4F6TA 2RD5A 3KZFA 2J4KA 3ZZIA 4JZ7A 3S6HA 3ZZHA 1OHBA 3D2MA 3QVHA 2JJ4A 4KZTA 3WWNA 2V4YA 4NDOA 2J4JA 3QUOA 3EK6A 3K52A 2BNDA 3TVIA 4NDRA 4AB7A 3D41A
chains in the Genus database with same CATH topology
2AKOA 2R98A 4NDQB 3ZZFA 2CDQA 4USJA 2WE5A 2WE4A 4AXSA 1Z9DA 2R8VA 4NDRB 3K4OA 2X2WA 3AAWA 3K56A 2BNEA 1E19A 3EK5A 3U6UA 2WXBA 3QURA 1GS5A 3LKKA 2VA1A 2J5VA 2HMFA 1B7BA 1YBDA 2JI5A 3LL9A 2JJXA 4F6TB 2V5HA 2BMUA 3L86A 4I49A 4OLCA 3ZZGA 2BRIA 3S6KA 4NDOB 3B8GA 2BUFA 3C1MA 3C20A 3AB4A 4A7WA 3WWMA 3AB2A 2BTYA 3S6GA 2W21A 3L76A 1OH9A 4JZ9A 3NWYA 4NDPB 2OGXB 3T7BA 2BRXA 2A1FA 3K4YA 4JZ8A 2OGXA 3C1NA 4Q1TA 3QVFA 3D2PA 3QUNA 4A7XA 4NDPA 3LL5A 4NDQA 2J5TA 2AP9A 2J0WA 2BNFA 1GSJA 1OHAA 2IJ9A 2J4LA 2E9YA 2J0XA 3D40A 4F6TA 2RD5A 3KZFA 2J4KA 3ZZIA 4JZ7A 3S6HA 3ZZHA 1OHBA 3D2MA 3QVHA 2JJ4A 4KZTA 3WWNA 2V4YA 4NDOA 2J4JA 3QUOA 3EK6A 3K52A 2BNDA 3TVIA 4NDRA 4AB7A 3D41A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AKO A;  2R98 A;  4NDQ B;  3ZZF A;  2CDQ A;  4USJ A;  2WE5 A;  2WE4 A;  4AXS A;  1Z9D A;  2R8V A;  4NDR B;  3K4O A;  2X2W A;  3AAW A;  3K56 A;  2BNE A;  1E19 A;  3EK5 A;  3U6U A;  2WXB A;  3QUR A;  1GS5 A;  3LKK A;  2VA1 A;  2J5V A;  2HMF A;  1B7B A;  1YBD A;  2JI5 A;  3LL9 A;  2JJX A;  4F6T B;  2V5H A;  2BMU A;  3L86 A;  4I49 A;  4OLC A;  3ZZG A;  2BRI A;  3S6K A;  4NDO B;  3B8G A;  2BUF A;  3C1M A;  3C20 A;  3AB4 A;  4A7W A;  3WWM A;  3AB2 A;  2BTY A;  3S6G A;  2W21 A;  3L76 A;  1OH9 A;  4JZ9 A;  3NWY A;  4NDP B;  2OGX B;  3T7B A;  2BRX A;  2A1F A;  3K4Y A;  4JZ8 A;  2OGX A;  3C1N A;  4Q1T A;  3QVF A;  3D2P A;  3QUN A;  4A7X A;  4NDP A;  3LL5 A;  4NDQ A;  2J5T A;  2AP9 A;  2J0W A;  2BNF A;  1GSJ A;  1OHA A;  2IJ9 A;  2J4L A;  2E9Y A;  2J0X A;  3D40 A;  4F6T A;  2RD5 A;  3KZF A;  2J4K A;  3ZZI A;  4JZ7 A;  3S6H A;  3ZZH A;  1OHB A;  3D2M A;  3QVH A;  2JJ4 A;  4KZT A;  3WWN A;  2V4Y A;  4NDO A;  2J4J A;  3QUO A;  3EK6 A;  3K52 A;  2BND A;  3TVI A;  4NDR A;  4AB7 A;  3D41 A; 
#chains in the Genus database with same CATH topology
 2AKO A;  2R98 A;  4NDQ B;  3ZZF A;  2CDQ A;  4USJ A;  2WE5 A;  2WE4 A;  4AXS A;  1Z9D A;  2R8V A;  4NDR B;  3K4O A;  2X2W A;  3AAW A;  3K56 A;  2BNE A;  1E19 A;  3EK5 A;  3U6U A;  2WXB A;  3QUR A;  1GS5 A;  3LKK A;  2VA1 A;  2J5V A;  2HMF A;  1B7B A;  1YBD A;  2JI5 A;  3LL9 A;  2JJX A;  4F6T B;  2V5H A;  2BMU A;  3L86 A;  4I49 A;  4OLC A;  3ZZG A;  2BRI A;  3S6K A;  4NDO B;  3B8G A;  2BUF A;  3C1M A;  3C20 A;  3AB4 A;  4A7W A;  3WWM A;  3AB2 A;  2BTY A;  3S6G A;  2W21 A;  3L76 A;  1OH9 A;  4JZ9 A;  3NWY A;  4NDP B;  2OGX B;  3T7B A;  2BRX A;  2A1F A;  3K4Y A;  4JZ8 A;  2OGX A;  3C1N A;  4Q1T A;  3QVF A;  3D2P A;  3QUN A;  4A7X A;  4NDP A;  3LL5 A;  4NDQ A;  2J5T A;  2AP9 A;  2J0W A;  2BNF A;  1GSJ A;  1OHA A;  2IJ9 A;  2J4L A;  2E9Y A;  2J0X A;  3D40 A;  4F6T A;  2RD5 A;  3KZF A;  2J4K A;  3ZZI A;  4JZ7 A;  3S6H A;  3ZZH A;  1OHB A;  3D2M A;  3QVH A;  2JJ4 A;  4KZT A;  3WWN A;  2V4Y A;  4NDO A;  2J4J A;  3QUO A;  3EK6 A;  3K52 A;  2BND A;  3TVI A;  4NDR A;  4AB7 A;  3D41 A; 
#chains in the Genus database with same CATH homology
 2AKO A;  2R98 A;  4NDQ B;  3ZZF A;  2CDQ A;  4USJ A;  2WE5 A;  2WE4 A;  4AXS A;  1Z9D A;  2R8V A;  4NDR B;  3K4O A;  2X2W A;  3AAW A;  3K56 A;  2BNE A;  1E19 A;  3EK5 A;  3U6U A;  2WXB A;  3QUR A;  1GS5 A;  3LKK A;  2VA1 A;  2J5V A;  2HMF A;  1B7B A;  1YBD A;  2JI5 A;  3LL9 A;  2JJX A;  4F6T B;  2V5H A;  2BMU A;  3L86 A;  4I49 A;  4OLC A;  3ZZG A;  2BRI A;  3S6K A;  4NDO B;  3B8G A;  2BUF A;  3C1M A;  3C20 A;  3AB4 A;  4A7W A;  3WWM A;  3AB2 A;  2BTY A;  3S6G A;  2W21 A;  3L76 A;  1OH9 A;  4JZ9 A;  3NWY A;  4NDP B;  2OGX B;  3T7B A;  2BRX A;  2A1F A;  3K4Y A;  4JZ8 A;  2OGX A;  3C1N A;  4Q1T A;  3QVF A;  3D2P A;  3QUN A;  4A7X A;  4NDP A;  3LL5 A;  4NDQ A;  2J5T A;  2AP9 A;  2J0W A;  2BNF A;  1GSJ A;  1OHA A;  2IJ9 A;  2J4L A;  2E9Y A;  2J0X A;  3D40 A;  4F6T A;  2RD5 A;  3KZF A;  2J4K A;  3ZZI A;  4JZ7 A;  3S6H A;  3ZZH A;  1OHB A;  3D2M A;  3QVH A;  2JJ4 A;  4KZT A;  3WWN A;  2V4Y A;  4NDO A;  2J4J A;  3QUO A;  3EK6 A;  3K52 A;  2BND A;  3TVI A;  4NDR A;  4AB7 A;  3D41 A; 
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