2WXBA

Acetylglutamate kinase from escherichia coli free of substrates
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
257
structure length
257
Chain Sequence
MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Two Crystal Structures of Escherichia Coli N-Acetyl-L-Glutamate Kinase Demonstrate the Cycling between Open and Closed Conformations.
pubmed doi rcsb
source organism Escherichia coli
total genus 86
structure length 257
sequence length 257
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2009-11-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2wxbA00
1OH9A 4USJA 3AAWA 4A7XA 3QURA 4I49A 4KZTA 4NDRA 2WXBA 3LKKA 2OGXA 2J0WA 2V4YA 3K4OA 2V5HA 2BUFA 2J4LA 3L86A 1E19A 2RD5A 3D2MA 3C1NA 1Z9DA 3LL5A 3WWNA 3C1MA 2JI5A 4JZ7A 3S6KA 4AXSA 3AB2A 3K4YA 3ZZGA 4NDQA 4A7WA 3U6UA 2A1FA 2WE4A 2W21A 4NDOA 3QVFA 3D41A 2R98A 2J4KA 2BRIA 4NDPA 2HMFA 3QUNA 3ZZIA 2BNEA 3C20A 3D2PA 2JJ4A 3D40A 2J0XA 2WE5A 3K56A 4OLCA 4NDRB 3TVIA 3B8GA 2BRXA 2OGXB 1YBDA 2JJXA 4JZ9A 2BTYA 2R8VA 2AP9A 3WWMA 3ZZFA 2E9YA 3QVHA 3NWYA 4F6TB 2J5VA 3LL9A 4AB7A 2IJ9A 2CDQA 3AB4A 2J5TA 3KZFA 2X2WA 3QUOA 3ZZHA 1GS5A 3S6HA 3S6GA 4JZ8A 2AKOA 2BNFA 2J4JA 2VA1A 4NDOB 3L76A 3EK5A 4Q1TA 4NDPB 3EK6A 3T7BA 1OHBA 3K52A 4F6TA 2BMUA 1GSJA 2BNDA 1OHAA 1B7BA 4NDQB
chains in the Genus database with same CATH superfamily
1OH9A 4USJA 3AAWA 4A7XA 3QURA 4I49A 4KZTA 4NDRA 2WXBA 3LKKA 2OGXA 2J0WA 2V4YA 3K4OA 2V5HA 2BUFA 2J4LA 3L86A 1E19A 2RD5A 3D2MA 3C1NA 1Z9DA 3LL5A 3WWNA 3C1MA 2JI5A 4JZ7A 3S6KA 4AXSA 3AB2A 3K4YA 3ZZGA 4NDQA 4A7WA 3U6UA 2A1FA 2WE4A 2W21A 4NDOA 3QVFA 3D41A 2R98A 2J4KA 2BRIA 4NDPA 2HMFA 3QUNA 3ZZIA 2BNEA 3C20A 3D2PA 2JJ4A 3D40A 2J0XA 2WE5A 3K56A 4OLCA 4NDRB 3TVIA 3B8GA 2BRXA 2OGXB 1YBDA 2JJXA 4JZ9A 2BTYA 2R8VA 2AP9A 3WWMA 3ZZFA 2E9YA 3QVHA 3NWYA 4F6TB 2J5VA 3LL9A 4AB7A 2IJ9A 2CDQA 3AB4A 2J5TA 3KZFA 2X2WA 3QUOA 3ZZHA 1GS5A 3S6HA 3S6GA 4JZ8A 2AKOA 2BNFA 2J4JA 2VA1A 4NDOB 3L76A 3EK5A 4Q1TA 4NDPB 3EK6A 3T7BA 1OHBA 3K52A 4F6TA 2BMUA 1GSJA 2BNDA 1OHAA 1B7BA 4NDQB
chains in the Genus database with same CATH topology
1OH9A 4USJA 3AAWA 4A7XA 3QURA 4I49A 4KZTA 4NDRA 2WXBA 3LKKA 2OGXA 2J0WA 2V4YA 3K4OA 2V5HA 2BUFA 2J4LA 3L86A 1E19A 2RD5A 3D2MA 3C1NA 1Z9DA 3LL5A 3WWNA 3C1MA 2JI5A 4JZ7A 3S6KA 4AXSA 3AB2A 3K4YA 3ZZGA 4NDQA 4A7WA 3U6UA 2A1FA 2WE4A 2W21A 4NDOA 3QVFA 3D41A 2R98A 2J4KA 2BRIA 4NDPA 2HMFA 3QUNA 3ZZIA 2BNEA 3C20A 3D2PA 2JJ4A 3D40A 2J0XA 2WE5A 3K56A 4OLCA 4NDRB 3TVIA 3B8GA 2BRXA 2OGXB 1YBDA 2JJXA 4JZ9A 2BTYA 2R8VA 2AP9A 3WWMA 3ZZFA 2E9YA 3QVHA 3NWYA 4F6TB 2J5VA 3LL9A 4AB7A 2IJ9A 2CDQA 3AB4A 2J5TA 3KZFA 2X2WA 3QUOA 3ZZHA 1GS5A 3S6HA 3S6GA 4JZ8A 2AKOA 2BNFA 2J4JA 2VA1A 4NDOB 3L76A 3EK5A 4Q1TA 4NDPB 3EK6A 3T7BA 1OHBA 3K52A 4F6TA 2BMUA 1GSJA 2BNDA 1OHAA 1B7BA 4NDQB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1OH9 A;  4USJ A;  3AAW A;  4A7X A;  3QUR A;  4I49 A;  4KZT A;  4NDR A;  2WXB A;  3LKK A;  2OGX A;  2J0W A;  2V4Y A;  3K4O A;  2V5H A;  2BUF A;  2J4L A;  3L86 A;  1E19 A;  2RD5 A;  3D2M A;  3C1N A;  1Z9D A;  3LL5 A;  3WWN A;  3C1M A;  2JI5 A;  4JZ7 A;  3S6K A;  4AXS A;  3AB2 A;  3K4Y A;  3ZZG A;  4NDQ A;  4A7W A;  3U6U A;  2A1F A;  2WE4 A;  2W21 A;  4NDO A;  3QVF A;  3D41 A;  2R98 A;  2J4K A;  2BRI A;  4NDP A;  2HMF A;  3QUN A;  3ZZI A;  2BNE A;  3C20 A;  3D2P A;  2JJ4 A;  3D40 A;  2J0X A;  2WE5 A;  3K56 A;  4OLC A;  4NDR B;  3TVI A;  3B8G A;  2BRX A;  2OGX B;  1YBD A;  2JJX A;  4JZ9 A;  2BTY A;  2R8V A;  2AP9 A;  3WWM A;  3ZZF A;  2E9Y A;  3QVH A;  3NWY A;  4F6T B;  2J5V A;  3LL9 A;  4AB7 A;  2IJ9 A;  2CDQ A;  3AB4 A;  2J5T A;  3KZF A;  2X2W A;  3QUO A;  3ZZH A;  1GS5 A;  3S6H A;  3S6G A;  4JZ8 A;  2AKO A;  2BNF A;  2J4J A;  2VA1 A;  4NDO B;  3L76 A;  3EK5 A;  4Q1T A;  4NDP B;  3EK6 A;  3T7B A;  1OHB A;  3K52 A;  4F6T A;  2BMU A;  1GSJ A;  2BND A;  1OHA A;  1B7B A;  4NDQ B; 
#chains in the Genus database with same CATH topology
 1OH9 A;  4USJ A;  3AAW A;  4A7X A;  3QUR A;  4I49 A;  4KZT A;  4NDR A;  2WXB A;  3LKK A;  2OGX A;  2J0W A;  2V4Y A;  3K4O A;  2V5H A;  2BUF A;  2J4L A;  3L86 A;  1E19 A;  2RD5 A;  3D2M A;  3C1N A;  1Z9D A;  3LL5 A;  3WWN A;  3C1M A;  2JI5 A;  4JZ7 A;  3S6K A;  4AXS A;  3AB2 A;  3K4Y A;  3ZZG A;  4NDQ A;  4A7W A;  3U6U A;  2A1F A;  2WE4 A;  2W21 A;  4NDO A;  3QVF A;  3D41 A;  2R98 A;  2J4K A;  2BRI A;  4NDP A;  2HMF A;  3QUN A;  3ZZI A;  2BNE A;  3C20 A;  3D2P A;  2JJ4 A;  3D40 A;  2J0X A;  2WE5 A;  3K56 A;  4OLC A;  4NDR B;  3TVI A;  3B8G A;  2BRX A;  2OGX B;  1YBD A;  2JJX A;  4JZ9 A;  2BTY A;  2R8V A;  2AP9 A;  3WWM A;  3ZZF A;  2E9Y A;  3QVH A;  3NWY A;  4F6T B;  2J5V A;  3LL9 A;  4AB7 A;  2IJ9 A;  2CDQ A;  3AB4 A;  2J5T A;  3KZF A;  2X2W A;  3QUO A;  3ZZH A;  1GS5 A;  3S6H A;  3S6G A;  4JZ8 A;  2AKO A;  2BNF A;  2J4J A;  2VA1 A;  4NDO B;  3L76 A;  3EK5 A;  4Q1T A;  4NDP B;  3EK6 A;  3T7B A;  1OHB A;  3K52 A;  4F6T A;  2BMU A;  1GSJ A;  2BND A;  1OHA A;  1B7B A;  4NDQ B; 
#chains in the Genus database with same CATH homology
 1OH9 A;  4USJ A;  3AAW A;  4A7X A;  3QUR A;  4I49 A;  4KZT A;  4NDR A;  2WXB A;  3LKK A;  2OGX A;  2J0W A;  2V4Y A;  3K4O A;  2V5H A;  2BUF A;  2J4L A;  3L86 A;  1E19 A;  2RD5 A;  3D2M A;  3C1N A;  1Z9D A;  3LL5 A;  3WWN A;  3C1M A;  2JI5 A;  4JZ7 A;  3S6K A;  4AXS A;  3AB2 A;  3K4Y A;  3ZZG A;  4NDQ A;  4A7W A;  3U6U A;  2A1F A;  2WE4 A;  2W21 A;  4NDO A;  3QVF A;  3D41 A;  2R98 A;  2J4K A;  2BRI A;  4NDP A;  2HMF A;  3QUN A;  3ZZI A;  2BNE A;  3C20 A;  3D2P A;  2JJ4 A;  3D40 A;  2J0X A;  2WE5 A;  3K56 A;  4OLC A;  4NDR B;  3TVI A;  3B8G A;  2BRX A;  2OGX B;  1YBD A;  2JJX A;  4JZ9 A;  2BTY A;  2R8V A;  2AP9 A;  3WWM A;  3ZZF A;  2E9Y A;  3QVH A;  3NWY A;  4F6T B;  2J5V A;  3LL9 A;  4AB7 A;  2IJ9 A;  2CDQ A;  3AB4 A;  2J5T A;  3KZF A;  2X2W A;  3QUO A;  3ZZH A;  1GS5 A;  3S6H A;  3S6G A;  4JZ8 A;  2AKO A;  2BNF A;  2J4J A;  2VA1 A;  4NDO B;  3L76 A;  3EK5 A;  4Q1T A;  4NDP B;  3EK6 A;  3T7B A;  1OHB A;  3K52 A;  4F6T A;  2BMU A;  1GSJ A;  2BND A;  1OHA A;  1B7B A;  4NDQ B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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