2WXBA

Acetylglutamate kinase from escherichia coli free of substrates
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
257
structure length
257
Chain Sequence
MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Two Crystal Structures of Escherichia Coli N-Acetyl-L-Glutamate Kinase Demonstrate the Cycling between Open and Closed Conformations.
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
molecule tags Transferase
source organism Escherichia coli
total genus 86
structure length 257
sequence length 257
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2009-11-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2wxbA00
4NDQB 3ZZIA 2R98A 2VA1A 2A1FA 2HMFA 2AP9A 2IJ9A 2J5VA 1OH9A 1E19A 2J4KA 4AB7A 3L76A 3T7BA 3S6HA 2V4YA 4A7XA 2JI5A 4AXSA 3NWYA 2V5HA 3KZFA 4A7WA 1YBDA 2BUFA 3WWNA 3QVHA 3LL9A 4OLCA 3B8GA 3U6UA 2E9YA 4F6TB 2W21A 2BTYA 2CDQA 3K56A 3EK5A 2J0WA 2BMUA 2JJ4A 4Q1TA 3C1NA 4I49A 2J5TA 3ZZGA 3D2PA 2WXBA 2R8VA 4F6TA 2WE5A 1GS5A 3QUNA 3S6GA 3K4YA 3C20A 3D40A 2RD5A 4NDPA 3WWMA 1GSJA 3EK6A 2JJXA 2J4LA 4NDPB 4NDRB 3LL5A 3TVIA 3LKKA 3ZZFA 2WE4A 4NDOB 3AAWA 3D2MA 3QURA 2BNFA 3ZZHA 1OHAA 3AB2A 1B7BA 2OGXA 4USJA 2AKOA 2OGXB 2BNDA 2BNEA 3QUOA 3D41A 2BRXA 2BRIA 4KZTA 1Z9DA 2J0XA 4NDRA 3K4OA 2X2WA 3C1MA 3QVFA 4NDOA 3AB4A 3K52A 2J4JA 3S6KA 4JZ8A 4JZ9A 1OHBA 4NDQA 4JZ7A 3L86A
chains in the Genus database with same CATH superfamily
4NDQB 3ZZIA 2R98A 2VA1A 2A1FA 2HMFA 2AP9A 2IJ9A 2J5VA 1OH9A 1E19A 2J4KA 4AB7A 3L76A 3T7BA 3S6HA 2V4YA 4A7XA 2JI5A 4AXSA 3NWYA 2V5HA 3KZFA 4A7WA 1YBDA 2BUFA 3WWNA 3QVHA 3LL9A 4OLCA 3B8GA 3U6UA 2E9YA 4F6TB 2W21A 2BTYA 2CDQA 3K56A 3EK5A 2J0WA 2BMUA 2JJ4A 4Q1TA 3C1NA 4I49A 2J5TA 3ZZGA 3D2PA 2WXBA 2R8VA 4F6TA 2WE5A 1GS5A 3QUNA 3S6GA 3K4YA 3C20A 3D40A 2RD5A 4NDPA 3WWMA 1GSJA 3EK6A 2JJXA 2J4LA 4NDPB 4NDRB 3LL5A 3TVIA 3LKKA 3ZZFA 2WE4A 4NDOB 3AAWA 3D2MA 3QURA 2BNFA 3ZZHA 1OHAA 3AB2A 1B7BA 2OGXA 4USJA 2AKOA 2OGXB 2BNDA 2BNEA 3QUOA 3D41A 2BRXA 2BRIA 4KZTA 1Z9DA 2J0XA 4NDRA 3K4OA 2X2WA 3C1MA 3QVFA 4NDOA 3AB4A 3K52A 2J4JA 3S6KA 4JZ8A 4JZ9A 1OHBA 4NDQA 4JZ7A 3L86A
chains in the Genus database with same CATH topology
4NDQB 3ZZIA 2R98A 2VA1A 2A1FA 2HMFA 2AP9A 2IJ9A 2J5VA 1OH9A 1E19A 2J4KA 4AB7A 3L76A 3T7BA 3S6HA 2V4YA 4A7XA 2JI5A 4AXSA 3NWYA 2V5HA 3KZFA 4A7WA 1YBDA 2BUFA 3WWNA 3QVHA 3LL9A 4OLCA 3B8GA 3U6UA 2E9YA 4F6TB 2W21A 2BTYA 2CDQA 3K56A 3EK5A 2J0WA 2BMUA 2JJ4A 4Q1TA 3C1NA 4I49A 2J5TA 3ZZGA 3D2PA 2WXBA 2R8VA 4F6TA 2WE5A 1GS5A 3QUNA 3S6GA 3K4YA 3C20A 3D40A 2RD5A 4NDPA 3WWMA 1GSJA 3EK6A 2JJXA 2J4LA 4NDPB 4NDRB 3LL5A 3TVIA 3LKKA 3ZZFA 2WE4A 4NDOB 3AAWA 3D2MA 3QURA 2BNFA 3ZZHA 1OHAA 3AB2A 1B7BA 2OGXA 4USJA 2AKOA 2OGXB 2BNDA 2BNEA 3QUOA 3D41A 2BRXA 2BRIA 4KZTA 1Z9DA 2J0XA 4NDRA 3K4OA 2X2WA 3C1MA 3QVFA 4NDOA 3AB4A 3K52A 2J4JA 3S6KA 4JZ8A 4JZ9A 1OHBA 4NDQA 4JZ7A 3L86A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 4NDQ B;  3ZZI A;  2R98 A;  2VA1 A;  2A1F A;  2HMF A;  2AP9 A;  2IJ9 A;  2J5V A;  1OH9 A;  1E19 A;  2J4K A;  4AB7 A;  3L76 A;  3T7B A;  3S6H A;  2V4Y A;  4A7X A;  2JI5 A;  4AXS A;  3NWY A;  2V5H A;  3KZF A;  4A7W A;  1YBD A;  2BUF A;  3WWN A;  3QVH A;  3LL9 A;  4OLC A;  3B8G A;  3U6U A;  2E9Y A;  4F6T B;  2W21 A;  2BTY A;  2CDQ A;  3K56 A;  3EK5 A;  2J0W A;  2BMU A;  2JJ4 A;  4Q1T A;  3C1N A;  4I49 A;  2J5T A;  3ZZG A;  3D2P A;  2WXB A;  2R8V A;  4F6T A;  2WE5 A;  1GS5 A;  3QUN A;  3S6G A;  3K4Y A;  3C20 A;  3D40 A;  2RD5 A;  4NDP A;  3WWM A;  1GSJ A;  3EK6 A;  2JJX A;  2J4L A;  4NDP B;  4NDR B;  3LL5 A;  3TVI A;  3LKK A;  3ZZF A;  2WE4 A;  4NDO B;  3AAW A;  3D2M A;  3QUR A;  2BNF A;  3ZZH A;  1OHA A;  3AB2 A;  1B7B A;  2OGX A;  4USJ A;  2AKO A;  2OGX B;  2BND A;  2BNE A;  3QUO A;  3D41 A;  2BRX A;  2BRI A;  4KZT A;  1Z9D A;  2J0X A;  4NDR A;  3K4O A;  2X2W A;  3C1M A;  3QVF A;  4NDO A;  3AB4 A;  3K52 A;  2J4J A;  3S6K A;  4JZ8 A;  4JZ9 A;  1OHB A;  4NDQ A;  4JZ7 A;  3L86 A; 
#chains in the Genus database with same CATH topology
 4NDQ B;  3ZZI A;  2R98 A;  2VA1 A;  2A1F A;  2HMF A;  2AP9 A;  2IJ9 A;  2J5V A;  1OH9 A;  1E19 A;  2J4K A;  4AB7 A;  3L76 A;  3T7B A;  3S6H A;  2V4Y A;  4A7X A;  2JI5 A;  4AXS A;  3NWY A;  2V5H A;  3KZF A;  4A7W A;  1YBD A;  2BUF A;  3WWN A;  3QVH A;  3LL9 A;  4OLC A;  3B8G A;  3U6U A;  2E9Y A;  4F6T B;  2W21 A;  2BTY A;  2CDQ A;  3K56 A;  3EK5 A;  2J0W A;  2BMU A;  2JJ4 A;  4Q1T A;  3C1N A;  4I49 A;  2J5T A;  3ZZG A;  3D2P A;  2WXB A;  2R8V A;  4F6T A;  2WE5 A;  1GS5 A;  3QUN A;  3S6G A;  3K4Y A;  3C20 A;  3D40 A;  2RD5 A;  4NDP A;  3WWM A;  1GSJ A;  3EK6 A;  2JJX A;  2J4L A;  4NDP B;  4NDR B;  3LL5 A;  3TVI A;  3LKK A;  3ZZF A;  2WE4 A;  4NDO B;  3AAW A;  3D2M A;  3QUR A;  2BNF A;  3ZZH A;  1OHA A;  3AB2 A;  1B7B A;  2OGX A;  4USJ A;  2AKO A;  2OGX B;  2BND A;  2BNE A;  3QUO A;  3D41 A;  2BRX A;  2BRI A;  4KZT A;  1Z9D A;  2J0X A;  4NDR A;  3K4O A;  2X2W A;  3C1M A;  3QVF A;  4NDO A;  3AB4 A;  3K52 A;  2J4J A;  3S6K A;  4JZ8 A;  4JZ9 A;  1OHB A;  4NDQ A;  4JZ7 A;  3L86 A; 
#chains in the Genus database with same CATH homology
 4NDQ B;  3ZZI A;  2R98 A;  2VA1 A;  2A1F A;  2HMF A;  2AP9 A;  2IJ9 A;  2J5V A;  1OH9 A;  1E19 A;  2J4K A;  4AB7 A;  3L76 A;  3T7B A;  3S6H A;  2V4Y A;  4A7X A;  2JI5 A;  4AXS A;  3NWY A;  2V5H A;  3KZF A;  4A7W A;  1YBD A;  2BUF A;  3WWN A;  3QVH A;  3LL9 A;  4OLC A;  3B8G A;  3U6U A;  2E9Y A;  4F6T B;  2W21 A;  2BTY A;  2CDQ A;  3K56 A;  3EK5 A;  2J0W A;  2BMU A;  2JJ4 A;  4Q1T A;  3C1N A;  4I49 A;  2J5T A;  3ZZG A;  3D2P A;  2WXB A;  2R8V A;  4F6T A;  2WE5 A;  1GS5 A;  3QUN A;  3S6G A;  3K4Y A;  3C20 A;  3D40 A;  2RD5 A;  4NDP A;  3WWM A;  1GSJ A;  3EK6 A;  2JJX A;  2J4L A;  4NDP B;  4NDR B;  3LL5 A;  3TVI A;  3LKK A;  3ZZF A;  2WE4 A;  4NDO B;  3AAW A;  3D2M A;  3QUR A;  2BNF A;  3ZZH A;  1OHA A;  3AB2 A;  1B7B A;  2OGX A;  4USJ A;  2AKO A;  2OGX B;  2BND A;  2BNE A;  3QUO A;  3D41 A;  2BRX A;  2BRI A;  4KZT A;  1Z9D A;  2J0X A;  4NDR A;  3K4O A;  2X2W A;  3C1M A;  3QVF A;  4NDO A;  3AB4 A;  3K52 A;  2J4J A;  3S6K A;  4JZ8 A;  4JZ9 A;  1OHB A;  4NDQ A;  4JZ7 A;  3L86 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
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