1E19A

Structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic archaeon pyrococcus furiosus bound to adp
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
313
structure length
313
Chain Sequence
GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHLEKAVEALEGKTGTQVLP
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The 1.5-A Resolution Crystal Structure of the Carbamate Kinase-Like Carbamoyl Phosphate Synthetase from the Hyperthermophilic Archaeon Pyrococcus Furiosus, Bound to Adp, Confirms that This Thermoestable Enzyme is a Carbamate Kinase, and Provides Insights Into Substrate Binding and Stability in Carbamate Kinases
pubmed doi rcsb
molecule tags Transferase
molecule keywords CARBAMATE KINASE
total genus 117
structure length 313
sequence length 313
chains with identical sequence B
ec nomenclature ec 2.7.2.2: Carbamate kinase.
pdb deposition date 2000-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1e19A00
4F6TA 4NDOA 3EK6A 4NDRB 3K52A 4JZ8A 3TVIA 3S6GA 3AAWA 2BNEA 2JJXA 1OH9A 2W21A 4AXSA 1OHBA 4A7WA 2IJ9A 3D41A 3C20A 3LKKA 2BNFA 2R98A 4JZ9A 2RD5A 2WE4A 3ZZGA 3QVHA 4NDQA 4NDQB 2V5HA 2J5VA 2J4JA 3ZZFA 2R8VA 3C1MA 3D2PA 2V4YA 3QUNA 2CDQA 2A1FA 3WWNA 4Q1TA 3LL9A 2HMFA 2AP9A 3D40A 1OHAA 3T7BA 2J5TA 4A7XA 4NDOB 4F6TB 2BTYA 4USJA 3QVFA 3C1NA 2J4KA 2J4LA 2BNDA 2WXBA 3NWYA 3S6KA 2BUFA 3B8GA 1YBDA 2OGXA 3ZZIA 3D2MA 4AB7A 1B7BA 3U6UA 3L76A 2BRIA 3QURA 2JI5A 2WE5A 3EK5A 3K4YA 1E19A 3AB2A 4NDRA 4NDPA 3LL5A 2JJ4A 3QUOA 2J0XA 3K56A 4I49A 2BMUA 2VA1A 1GS5A 1GSJA 3K4OA 2E9YA 4KZTA 2BRXA 1Z9DA 3L86A 4NDPB 3ZZHA 3AB4A 2X2WA 2AKOA 3WWMA 4OLCA 3KZFA 2J0WA 2OGXB 4JZ7A 3S6HA
chains in the Genus database with same CATH superfamily
4F6TA 4NDOA 3EK6A 4NDRB 3K52A 4JZ8A 3TVIA 3S6GA 3AAWA 2BNEA 2JJXA 1OH9A 2W21A 4AXSA 1OHBA 4A7WA 2IJ9A 3D41A 3C20A 3LKKA 2BNFA 2R98A 4JZ9A 2RD5A 2WE4A 3ZZGA 3QVHA 4NDQA 4NDQB 2V5HA 2J5VA 2J4JA 3ZZFA 2R8VA 3C1MA 3D2PA 2V4YA 3QUNA 2CDQA 2A1FA 3WWNA 4Q1TA 3LL9A 2HMFA 2AP9A 3D40A 1OHAA 3T7BA 2J5TA 4A7XA 4NDOB 4F6TB 2BTYA 4USJA 3QVFA 3C1NA 2J4KA 2J4LA 2BNDA 2WXBA 3NWYA 3S6KA 2BUFA 3B8GA 1YBDA 2OGXA 3ZZIA 3D2MA 4AB7A 1B7BA 3U6UA 3L76A 2BRIA 3QURA 2JI5A 2WE5A 3EK5A 3K4YA 1E19A 3AB2A 4NDRA 4NDPA 3LL5A 2JJ4A 3QUOA 2J0XA 3K56A 4I49A 2BMUA 2VA1A 1GS5A 1GSJA 3K4OA 2E9YA 4KZTA 2BRXA 1Z9DA 3L86A 4NDPB 3ZZHA 3AB4A 2X2WA 2AKOA 3WWMA 4OLCA 3KZFA 2J0WA 2OGXB 4JZ7A 3S6HA
chains in the Genus database with same CATH topology
4F6TA 4NDOA 3EK6A 4NDRB 3K52A 4JZ8A 3TVIA 3S6GA 3AAWA 2BNEA 2JJXA 1OH9A 2W21A 4AXSA 1OHBA 4A7WA 2IJ9A 3D41A 3C20A 3LKKA 2BNFA 2R98A 4JZ9A 2RD5A 2WE4A 3ZZGA 3QVHA 4NDQA 4NDQB 2V5HA 2J5VA 2J4JA 3ZZFA 2R8VA 3C1MA 3D2PA 2V4YA 3QUNA 2CDQA 2A1FA 3WWNA 4Q1TA 3LL9A 2HMFA 2AP9A 3D40A 1OHAA 3T7BA 2J5TA 4A7XA 4NDOB 4F6TB 2BTYA 4USJA 3QVFA 3C1NA 2J4KA 2J4LA 2BNDA 2WXBA 3NWYA 3S6KA 2BUFA 3B8GA 1YBDA 2OGXA 3ZZIA 3D2MA 4AB7A 1B7BA 3U6UA 3L76A 2BRIA 3QURA 2JI5A 2WE5A 3EK5A 3K4YA 1E19A 3AB2A 4NDRA 4NDPA 3LL5A 2JJ4A 3QUOA 2J0XA 3K56A 4I49A 2BMUA 2VA1A 1GS5A 1GSJA 3K4OA 2E9YA 4KZTA 2BRXA 1Z9DA 3L86A 4NDPB 3ZZHA 3AB4A 2X2WA 2AKOA 3WWMA 4OLCA 3KZFA 2J0WA 2OGXB 4JZ7A 3S6HA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4F6T A;  4NDO A;  3EK6 A;  4NDR B;  3K52 A;  4JZ8 A;  3TVI A;  3S6G A;  3AAW A;  2BNE A;  2JJX A;  1OH9 A;  2W21 A;  4AXS A;  1OHB A;  4A7W A;  2IJ9 A;  3D41 A;  3C20 A;  3LKK A;  2BNF A;  2R98 A;  4JZ9 A;  2RD5 A;  2WE4 A;  3ZZG A;  3QVH A;  4NDQ A;  4NDQ B;  2V5H A;  2J5V A;  2J4J A;  3ZZF A;  2R8V A;  3C1M A;  3D2P A;  2V4Y A;  3QUN A;  2CDQ A;  2A1F A;  3WWN A;  4Q1T A;  3LL9 A;  2HMF A;  2AP9 A;  3D40 A;  1OHA A;  3T7B A;  2J5T A;  4A7X A;  4NDO B;  4F6T B;  2BTY A;  4USJ A;  3QVF A;  3C1N A;  2J4K A;  2J4L A;  2BND A;  2WXB A;  3NWY A;  3S6K A;  2BUF A;  3B8G A;  1YBD A;  2OGX A;  3ZZI A;  3D2M A;  4AB7 A;  1B7B A;  3U6U A;  3L76 A;  2BRI A;  3QUR A;  2JI5 A;  2WE5 A;  3EK5 A;  3K4Y A;  1E19 A;  3AB2 A;  4NDR A;  4NDP A;  3LL5 A;  2JJ4 A;  3QUO A;  2J0X A;  3K56 A;  4I49 A;  2BMU A;  2VA1 A;  1GS5 A;  1GSJ A;  3K4O A;  2E9Y A;  4KZT A;  2BRX A;  1Z9D A;  3L86 A;  4NDP B;  3ZZH A;  3AB4 A;  2X2W A;  2AKO A;  3WWM A;  4OLC A;  3KZF A;  2J0W A;  2OGX B;  4JZ7 A;  3S6H A; 
#chains in the Genus database with same CATH topology
 4F6T A;  4NDO A;  3EK6 A;  4NDR B;  3K52 A;  4JZ8 A;  3TVI A;  3S6G A;  3AAW A;  2BNE A;  2JJX A;  1OH9 A;  2W21 A;  4AXS A;  1OHB A;  4A7W A;  2IJ9 A;  3D41 A;  3C20 A;  3LKK A;  2BNF A;  2R98 A;  4JZ9 A;  2RD5 A;  2WE4 A;  3ZZG A;  3QVH A;  4NDQ A;  4NDQ B;  2V5H A;  2J5V A;  2J4J A;  3ZZF A;  2R8V A;  3C1M A;  3D2P A;  2V4Y A;  3QUN A;  2CDQ A;  2A1F A;  3WWN A;  4Q1T A;  3LL9 A;  2HMF A;  2AP9 A;  3D40 A;  1OHA A;  3T7B A;  2J5T A;  4A7X A;  4NDO B;  4F6T B;  2BTY A;  4USJ A;  3QVF A;  3C1N A;  2J4K A;  2J4L A;  2BND A;  2WXB A;  3NWY A;  3S6K A;  2BUF A;  3B8G A;  1YBD A;  2OGX A;  3ZZI A;  3D2M A;  4AB7 A;  1B7B A;  3U6U A;  3L76 A;  2BRI A;  3QUR A;  2JI5 A;  2WE5 A;  3EK5 A;  3K4Y A;  1E19 A;  3AB2 A;  4NDR A;  4NDP A;  3LL5 A;  2JJ4 A;  3QUO A;  2J0X A;  3K56 A;  4I49 A;  2BMU A;  2VA1 A;  1GS5 A;  1GSJ A;  3K4O A;  2E9Y A;  4KZT A;  2BRX A;  1Z9D A;  3L86 A;  4NDP B;  3ZZH A;  3AB4 A;  2X2W A;  2AKO A;  3WWM A;  4OLC A;  3KZF A;  2J0W A;  2OGX B;  4JZ7 A;  3S6H A; 
#chains in the Genus database with same CATH homology
 4F6T A;  4NDO A;  3EK6 A;  4NDR B;  3K52 A;  4JZ8 A;  3TVI A;  3S6G A;  3AAW A;  2BNE A;  2JJX A;  1OH9 A;  2W21 A;  4AXS A;  1OHB A;  4A7W A;  2IJ9 A;  3D41 A;  3C20 A;  3LKK A;  2BNF A;  2R98 A;  4JZ9 A;  2RD5 A;  2WE4 A;  3ZZG A;  3QVH A;  4NDQ A;  4NDQ B;  2V5H A;  2J5V A;  2J4J A;  3ZZF A;  2R8V A;  3C1M A;  3D2P A;  2V4Y A;  3QUN A;  2CDQ A;  2A1F A;  3WWN A;  4Q1T A;  3LL9 A;  2HMF A;  2AP9 A;  3D40 A;  1OHA A;  3T7B A;  2J5T A;  4A7X A;  4NDO B;  4F6T B;  2BTY A;  4USJ A;  3QVF A;  3C1N A;  2J4K A;  2J4L A;  2BND A;  2WXB A;  3NWY A;  3S6K A;  2BUF A;  3B8G A;  1YBD A;  2OGX A;  3ZZI A;  3D2M A;  4AB7 A;  1B7B A;  3U6U A;  3L76 A;  2BRI A;  3QUR A;  2JI5 A;  2WE5 A;  3EK5 A;  3K4Y A;  1E19 A;  3AB2 A;  4NDR A;  4NDP A;  3LL5 A;  2JJ4 A;  3QUO A;  2J0X A;  3K56 A;  4I49 A;  2BMU A;  2VA1 A;  1GS5 A;  1GSJ A;  3K4O A;  2E9Y A;  4KZT A;  2BRX A;  1Z9D A;  3L86 A;  4NDP B;  3ZZH A;  3AB4 A;  2X2W A;  2AKO A;  3WWM A;  4OLC A;  3KZF A;  2J0W A;  2OGX B;  4JZ7 A;  3S6H A; 
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