3U6UA

Crystal structure of the putative acetylglutamate kinase from thermus thermophilus
Total Genus 89
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
89
sequence length
269
structure length
248
Chain Sequence
MIVVKVGGAEGINYEAVAKDAASLWKEGVKLLLVHGGSAETNKVAEALGHPPRFLTHPVSRLTDRKTLEIFEMVYCGLVNKRLVELLQKEGANAIGLSGLDGRLFVGRRKDYTGTVEEVNKALLDLLLQAGYLPVLTPPALSYENEAINTDGDQIAALLATLYGAEALVYLSNVPGLLAPDEASLVREIPVERIEDPEYLALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRALSGEGTVVR
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Putative acetylglutamate kinase
publication title The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
rcsb
source organism Thermus thermophilus
molecule tags Transferase
total genus 89
structure length 248
sequence length 269
chains with identical sequence C
ec nomenclature
pdb deposition date 2011-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3u6uA00
2R8VA 3T7BA 4NDRA 1OHBA 2RD5A 3ZZIA 3ZZFA 3EK5A 2WE4A 4JZ8A 2BRXA 2JI5A 4OLCA 2BNEA 3K4YA 2AP9A 2W21A 1B7BA 3AB2A 2BNDA 2CDQA 3K56A 2BNFA 2VA1A 1YBDA 1GSJA 2E9YA 4AB7A 2V5HA 4NDQB 1Z9DA 3QUOA 4NDOB 3QVFA 4AXSA 3L86A 2WE5A 3WWNA 3NWYA 2J4KA 3LL9A 2JJXA 3ZZGA 3WWMA 2J0XA 4NDQA 4NDPA 2BRIA 4NDOA 2OGXB 3S6GA 2BTYA 3U6UA 3D40A 3C20A 2IJ9A 4I49A 3D2PA 3S6HA 2V4YA 3LKKA 3TVIA 3B8GA 3KZFA 3AAWA 3QUNA 4JZ7A 4NDPB 3QVHA 1GS5A 4A7XA 2BUFA 4Q1TA 2OGXA 3QURA 3D41A 3C1MA 4JZ9A 4USJA 2J0WA 2J5VA 2X2WA 3EK6A 2A1FA 2AKOA 3D2MA 2R98A 3L76A 3K4OA 4F6TA 1OH9A 3ZZHA 2HMFA 4A7WA 2WXBA 3AB4A 4NDRB 2J5TA 4F6TB 2JJ4A 3K52A 2J4JA 4KZTA 3S6KA 1E19A 2BMUA 2J4LA 3LL5A 1OHAA 3C1NA
chains in the Genus database with same CATH superfamily
2R8VA 3T7BA 4NDRA 1OHBA 2RD5A 3ZZIA 3ZZFA 3EK5A 2WE4A 4JZ8A 2BRXA 2JI5A 4OLCA 2BNEA 3K4YA 2AP9A 2W21A 1B7BA 3AB2A 2BNDA 2CDQA 3K56A 2BNFA 2VA1A 1YBDA 1GSJA 2E9YA 4AB7A 2V5HA 4NDQB 1Z9DA 3QUOA 4NDOB 3QVFA 4AXSA 3L86A 2WE5A 3WWNA 3NWYA 2J4KA 3LL9A 2JJXA 3ZZGA 3WWMA 2J0XA 4NDQA 4NDPA 2BRIA 4NDOA 2OGXB 3S6GA 2BTYA 3U6UA 3D40A 3C20A 2IJ9A 4I49A 3D2PA 3S6HA 2V4YA 3LKKA 3TVIA 3B8GA 3KZFA 3AAWA 3QUNA 4JZ7A 4NDPB 3QVHA 1GS5A 4A7XA 2BUFA 4Q1TA 2OGXA 3QURA 3D41A 3C1MA 4JZ9A 4USJA 2J0WA 2J5VA 2X2WA 3EK6A 2A1FA 2AKOA 3D2MA 2R98A 3L76A 3K4OA 4F6TA 1OH9A 3ZZHA 2HMFA 4A7WA 2WXBA 3AB4A 4NDRB 2J5TA 4F6TB 2JJ4A 3K52A 2J4JA 4KZTA 3S6KA 1E19A 2BMUA 2J4LA 3LL5A 1OHAA 3C1NA
chains in the Genus database with same CATH topology
2R8VA 3T7BA 4NDRA 1OHBA 2RD5A 3ZZIA 3ZZFA 3EK5A 2WE4A 4JZ8A 2BRXA 2JI5A 4OLCA 2BNEA 3K4YA 2AP9A 2W21A 1B7BA 3AB2A 2BNDA 2CDQA 3K56A 2BNFA 2VA1A 1YBDA 1GSJA 2E9YA 4AB7A 2V5HA 4NDQB 1Z9DA 3QUOA 4NDOB 3QVFA 4AXSA 3L86A 2WE5A 3WWNA 3NWYA 2J4KA 3LL9A 2JJXA 3ZZGA 3WWMA 2J0XA 4NDQA 4NDPA 2BRIA 4NDOA 2OGXB 3S6GA 2BTYA 3U6UA 3D40A 3C20A 2IJ9A 4I49A 3D2PA 3S6HA 2V4YA 3LKKA 3TVIA 3B8GA 3KZFA 3AAWA 3QUNA 4JZ7A 4NDPB 3QVHA 1GS5A 4A7XA 2BUFA 4Q1TA 2OGXA 3QURA 3D41A 3C1MA 4JZ9A 4USJA 2J0WA 2J5VA 2X2WA 3EK6A 2A1FA 2AKOA 3D2MA 2R98A 3L76A 3K4OA 4F6TA 1OH9A 3ZZHA 2HMFA 4A7WA 2WXBA 3AB4A 4NDRB 2J5TA 4F6TB 2JJ4A 3K52A 2J4JA 4KZTA 3S6KA 1E19A 2BMUA 2J4LA 3LL5A 1OHAA 3C1NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2R8V A;  3T7B A;  4NDR A;  1OHB A;  2RD5 A;  3ZZI A;  3ZZF A;  3EK5 A;  2WE4 A;  4JZ8 A;  2BRX A;  2JI5 A;  4OLC A;  2BNE A;  3K4Y A;  2AP9 A;  2W21 A;  1B7B A;  3AB2 A;  2BND A;  2CDQ A;  3K56 A;  2BNF A;  2VA1 A;  1YBD A;  1GSJ A;  2E9Y A;  4AB7 A;  2V5H A;  4NDQ B;  1Z9D A;  3QUO A;  4NDO B;  3QVF A;  4AXS A;  3L86 A;  2WE5 A;  3WWN A;  3NWY A;  2J4K A;  3LL9 A;  2JJX A;  3ZZG A;  3WWM A;  2J0X A;  4NDQ A;  4NDP A;  2BRI A;  4NDO A;  2OGX B;  3S6G A;  2BTY A;  3U6U A;  3D40 A;  3C20 A;  2IJ9 A;  4I49 A;  3D2P A;  3S6H A;  2V4Y A;  3LKK A;  3TVI A;  3B8G A;  3KZF A;  3AAW A;  3QUN A;  4JZ7 A;  4NDP B;  3QVH A;  1GS5 A;  4A7X A;  2BUF A;  4Q1T A;  2OGX A;  3QUR A;  3D41 A;  3C1M A;  4JZ9 A;  4USJ A;  2J0W A;  2J5V A;  2X2W A;  3EK6 A;  2A1F A;  2AKO A;  3D2M A;  2R98 A;  3L76 A;  3K4O A;  4F6T A;  1OH9 A;  3ZZH A;  2HMF A;  4A7W A;  2WXB A;  3AB4 A;  4NDR B;  2J5T A;  4F6T B;  2JJ4 A;  3K52 A;  2J4J A;  4KZT A;  3S6K A;  1E19 A;  2BMU A;  2J4L A;  3LL5 A;  1OHA A;  3C1N A; 
#chains in the Genus database with same CATH topology
 2R8V A;  3T7B A;  4NDR A;  1OHB A;  2RD5 A;  3ZZI A;  3ZZF A;  3EK5 A;  2WE4 A;  4JZ8 A;  2BRX A;  2JI5 A;  4OLC A;  2BNE A;  3K4Y A;  2AP9 A;  2W21 A;  1B7B A;  3AB2 A;  2BND A;  2CDQ A;  3K56 A;  2BNF A;  2VA1 A;  1YBD A;  1GSJ A;  2E9Y A;  4AB7 A;  2V5H A;  4NDQ B;  1Z9D A;  3QUO A;  4NDO B;  3QVF A;  4AXS A;  3L86 A;  2WE5 A;  3WWN A;  3NWY A;  2J4K A;  3LL9 A;  2JJX A;  3ZZG A;  3WWM A;  2J0X A;  4NDQ A;  4NDP A;  2BRI A;  4NDO A;  2OGX B;  3S6G A;  2BTY A;  3U6U A;  3D40 A;  3C20 A;  2IJ9 A;  4I49 A;  3D2P A;  3S6H A;  2V4Y A;  3LKK A;  3TVI A;  3B8G A;  3KZF A;  3AAW A;  3QUN A;  4JZ7 A;  4NDP B;  3QVH A;  1GS5 A;  4A7X A;  2BUF A;  4Q1T A;  2OGX A;  3QUR A;  3D41 A;  3C1M A;  4JZ9 A;  4USJ A;  2J0W A;  2J5V A;  2X2W A;  3EK6 A;  2A1F A;  2AKO A;  3D2M A;  2R98 A;  3L76 A;  3K4O A;  4F6T A;  1OH9 A;  3ZZH A;  2HMF A;  4A7W A;  2WXB A;  3AB4 A;  4NDR B;  2J5T A;  4F6T B;  2JJ4 A;  3K52 A;  2J4J A;  4KZT A;  3S6K A;  1E19 A;  2BMU A;  2J4L A;  3LL5 A;  1OHA A;  3C1N A; 
#chains in the Genus database with same CATH homology
 2R8V A;  3T7B A;  4NDR A;  1OHB A;  2RD5 A;  3ZZI A;  3ZZF A;  3EK5 A;  2WE4 A;  4JZ8 A;  2BRX A;  2JI5 A;  4OLC A;  2BNE A;  3K4Y A;  2AP9 A;  2W21 A;  1B7B A;  3AB2 A;  2BND A;  2CDQ A;  3K56 A;  2BNF A;  2VA1 A;  1YBD A;  1GSJ A;  2E9Y A;  4AB7 A;  2V5H A;  4NDQ B;  1Z9D A;  3QUO A;  4NDO B;  3QVF A;  4AXS A;  3L86 A;  2WE5 A;  3WWN A;  3NWY A;  2J4K A;  3LL9 A;  2JJX A;  3ZZG A;  3WWM A;  2J0X A;  4NDQ A;  4NDP A;  2BRI A;  4NDO A;  2OGX B;  3S6G A;  2BTY A;  3U6U A;  3D40 A;  3C20 A;  2IJ9 A;  4I49 A;  3D2P A;  3S6H A;  2V4Y A;  3LKK A;  3TVI A;  3B8G A;  3KZF A;  3AAW A;  3QUN A;  4JZ7 A;  4NDP B;  3QVH A;  1GS5 A;  4A7X A;  2BUF A;  4Q1T A;  2OGX A;  3QUR A;  3D41 A;  3C1M A;  4JZ9 A;  4USJ A;  2J0W A;  2J5V A;  2X2W A;  3EK6 A;  2A1F A;  2AKO A;  3D2M A;  2R98 A;  3L76 A;  3K4O A;  4F6T A;  1OH9 A;  3ZZH A;  2HMF A;  4A7W A;  2WXB A;  3AB4 A;  4NDR B;  2J5T A;  4F6T B;  2JJ4 A;  3K52 A;  2J4J A;  4KZT A;  3S6K A;  1E19 A;  2BMU A;  2J4L A;  3LL5 A;  1OHA A;  3C1N A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...