3U6UA

Crystal structure of the putative acetylglutamate kinase from thermus thermophilus
Total Genus 89
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
89
sequence length
269
structure length
248
Chain Sequence
MIVVKVGGAEGINYEAVAKDAASLWKEGVKLLLVHGGSAETNKVAEALGHPPRFLTHPVSRLTDRKTLEIFEMVYCGLVNKRLVELLQKEGANAIGLSGLDGRLFVGRRKDYTGTVEEVNKALLDLLLQAGYLPVLTPPALSYENEAINTDGDQIAALLATLYGAEALVYLSNVPGLLAPDEASLVREIPVERIEDPEYLALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRALSGEGTVVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Putative acetylglutamate kinase
publication title The structure of first dimeric archaeal N-acetyl glutamate kinase reveals an intermediate conformation of the enzyme in the catalytic cycle
rcsb
source organism Thermus thermophilus
total genus 89
structure length 248
sequence length 269
chains with identical sequence C
ec nomenclature
pdb deposition date 2011-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3u6uA00
3K4YA 3C1NA 2AKOA 4AXSA 4A7WA 2R98A 4AB7A 3D2MA 3L86A 2WE5A 3K56A 2BTYA 4NDOB 3S6HA 2A1FA 2W21A 2WXBA 2JJ4A 3K52A 4OLCA 3ZZFA 4NDQB 4NDRB 3ZZGA 2BNFA 3T7BA 3WWMA 2J4KA 1OH9A 4JZ9A 3TVIA 4F6TB 1E19A 2BUFA 2RD5A 2BRXA 3S6GA 3QURA 2J4JA 2R8VA 2AP9A 4JZ7A 2WE4A 2J5TA 3LL9A 4NDQA 4NDRA 3B8GA 2BNEA 2BMUA 1YBDA 3C1MA 3K4OA 2X2WA 4KZTA 3L76A 2E9YA 2V5HA 4I49A 1GS5A 2HMFA 3QVHA 3ZZIA 4USJA 2CDQA 2OGXB 1GSJA 3C20A 3QVFA 2JJXA 3KZFA 3NWYA 4NDOA 3EK6A 3LL5A 3QUOA 3AAWA 1B7BA 2J0XA 2VA1A 4F6TA 2JI5A 4A7XA 3WWNA 2BNDA 3D41A 2OGXA 3AB4A 2BRIA 2V4YA 4NDPB 3U6UA 2J0WA 4Q1TA 2IJ9A 3EK5A 3S6KA 1OHAA 3ZZHA 3LKKA 3D40A 2J4LA 1Z9DA 3QUNA 3AB2A 4NDPA 1OHBA 3D2PA 4JZ8A 2J5VA
chains in the Genus database with same CATH superfamily
3K4YA 3C1NA 2AKOA 4AXSA 4A7WA 2R98A 4AB7A 3D2MA 3L86A 2WE5A 3K56A 2BTYA 4NDOB 3S6HA 2A1FA 2W21A 2WXBA 2JJ4A 3K52A 4OLCA 3ZZFA 4NDQB 4NDRB 3ZZGA 2BNFA 3T7BA 3WWMA 2J4KA 1OH9A 4JZ9A 3TVIA 4F6TB 1E19A 2BUFA 2RD5A 2BRXA 3S6GA 3QURA 2J4JA 2R8VA 2AP9A 4JZ7A 2WE4A 2J5TA 3LL9A 4NDQA 4NDRA 3B8GA 2BNEA 2BMUA 1YBDA 3C1MA 3K4OA 2X2WA 4KZTA 3L76A 2E9YA 2V5HA 4I49A 1GS5A 2HMFA 3QVHA 3ZZIA 4USJA 2CDQA 2OGXB 1GSJA 3C20A 3QVFA 2JJXA 3KZFA 3NWYA 4NDOA 3EK6A 3LL5A 3QUOA 3AAWA 1B7BA 2J0XA 2VA1A 4F6TA 2JI5A 4A7XA 3WWNA 2BNDA 3D41A 2OGXA 3AB4A 2BRIA 2V4YA 4NDPB 3U6UA 2J0WA 4Q1TA 2IJ9A 3EK5A 3S6KA 1OHAA 3ZZHA 3LKKA 3D40A 2J4LA 1Z9DA 3QUNA 3AB2A 4NDPA 1OHBA 3D2PA 4JZ8A 2J5VA
chains in the Genus database with same CATH topology
3K4YA 3C1NA 2AKOA 4AXSA 4A7WA 2R98A 4AB7A 3D2MA 3L86A 2WE5A 3K56A 2BTYA 4NDOB 3S6HA 2A1FA 2W21A 2WXBA 2JJ4A 3K52A 4OLCA 3ZZFA 4NDQB 4NDRB 3ZZGA 2BNFA 3T7BA 3WWMA 2J4KA 1OH9A 4JZ9A 3TVIA 4F6TB 1E19A 2BUFA 2RD5A 2BRXA 3S6GA 3QURA 2J4JA 2R8VA 2AP9A 4JZ7A 2WE4A 2J5TA 3LL9A 4NDQA 4NDRA 3B8GA 2BNEA 2BMUA 1YBDA 3C1MA 3K4OA 2X2WA 4KZTA 3L76A 2E9YA 2V5HA 4I49A 1GS5A 2HMFA 3QVHA 3ZZIA 4USJA 2CDQA 2OGXB 1GSJA 3C20A 3QVFA 2JJXA 3KZFA 3NWYA 4NDOA 3EK6A 3LL5A 3QUOA 3AAWA 1B7BA 2J0XA 2VA1A 4F6TA 2JI5A 4A7XA 3WWNA 2BNDA 3D41A 2OGXA 3AB4A 2BRIA 2V4YA 4NDPB 3U6UA 2J0WA 4Q1TA 2IJ9A 3EK5A 3S6KA 1OHAA 3ZZHA 3LKKA 3D40A 2J4LA 1Z9DA 3QUNA 3AB2A 4NDPA 1OHBA 3D2PA 4JZ8A 2J5VA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3K4Y A;  3C1N A;  2AKO A;  4AXS A;  4A7W A;  2R98 A;  4AB7 A;  3D2M A;  3L86 A;  2WE5 A;  3K56 A;  2BTY A;  4NDO B;  3S6H A;  2A1F A;  2W21 A;  2WXB A;  2JJ4 A;  3K52 A;  4OLC A;  3ZZF A;  4NDQ B;  4NDR B;  3ZZG A;  2BNF A;  3T7B A;  3WWM A;  2J4K A;  1OH9 A;  4JZ9 A;  3TVI A;  4F6T B;  1E19 A;  2BUF A;  2RD5 A;  2BRX A;  3S6G A;  3QUR A;  2J4J A;  2R8V A;  2AP9 A;  4JZ7 A;  2WE4 A;  2J5T A;  3LL9 A;  4NDQ A;  4NDR A;  3B8G A;  2BNE A;  2BMU A;  1YBD A;  3C1M A;  3K4O A;  2X2W A;  4KZT A;  3L76 A;  2E9Y A;  2V5H A;  4I49 A;  1GS5 A;  2HMF A;  3QVH A;  3ZZI A;  4USJ A;  2CDQ A;  2OGX B;  1GSJ A;  3C20 A;  3QVF A;  2JJX A;  3KZF A;  3NWY A;  4NDO A;  3EK6 A;  3LL5 A;  3QUO A;  3AAW A;  1B7B A;  2J0X A;  2VA1 A;  4F6T A;  2JI5 A;  4A7X A;  3WWN A;  2BND A;  3D41 A;  2OGX A;  3AB4 A;  2BRI A;  2V4Y A;  4NDP B;  3U6U A;  2J0W A;  4Q1T A;  2IJ9 A;  3EK5 A;  3S6K A;  1OHA A;  3ZZH A;  3LKK A;  3D40 A;  2J4L A;  1Z9D A;  3QUN A;  3AB2 A;  4NDP A;  1OHB A;  3D2P A;  4JZ8 A;  2J5V A; 
#chains in the Genus database with same CATH topology
 3K4Y A;  3C1N A;  2AKO A;  4AXS A;  4A7W A;  2R98 A;  4AB7 A;  3D2M A;  3L86 A;  2WE5 A;  3K56 A;  2BTY A;  4NDO B;  3S6H A;  2A1F A;  2W21 A;  2WXB A;  2JJ4 A;  3K52 A;  4OLC A;  3ZZF A;  4NDQ B;  4NDR B;  3ZZG A;  2BNF A;  3T7B A;  3WWM A;  2J4K A;  1OH9 A;  4JZ9 A;  3TVI A;  4F6T B;  1E19 A;  2BUF A;  2RD5 A;  2BRX A;  3S6G A;  3QUR A;  2J4J A;  2R8V A;  2AP9 A;  4JZ7 A;  2WE4 A;  2J5T A;  3LL9 A;  4NDQ A;  4NDR A;  3B8G A;  2BNE A;  2BMU A;  1YBD A;  3C1M A;  3K4O A;  2X2W A;  4KZT A;  3L76 A;  2E9Y A;  2V5H A;  4I49 A;  1GS5 A;  2HMF A;  3QVH A;  3ZZI A;  4USJ A;  2CDQ A;  2OGX B;  1GSJ A;  3C20 A;  3QVF A;  2JJX A;  3KZF A;  3NWY A;  4NDO A;  3EK6 A;  3LL5 A;  3QUO A;  3AAW A;  1B7B A;  2J0X A;  2VA1 A;  4F6T A;  2JI5 A;  4A7X A;  3WWN A;  2BND A;  3D41 A;  2OGX A;  3AB4 A;  2BRI A;  2V4Y A;  4NDP B;  3U6U A;  2J0W A;  4Q1T A;  2IJ9 A;  3EK5 A;  3S6K A;  1OHA A;  3ZZH A;  3LKK A;  3D40 A;  2J4L A;  1Z9D A;  3QUN A;  3AB2 A;  4NDP A;  1OHB A;  3D2P A;  4JZ8 A;  2J5V A; 
#chains in the Genus database with same CATH homology
 3K4Y A;  3C1N A;  2AKO A;  4AXS A;  4A7W A;  2R98 A;  4AB7 A;  3D2M A;  3L86 A;  2WE5 A;  3K56 A;  2BTY A;  4NDO B;  3S6H A;  2A1F A;  2W21 A;  2WXB A;  2JJ4 A;  3K52 A;  4OLC A;  3ZZF A;  4NDQ B;  4NDR B;  3ZZG A;  2BNF A;  3T7B A;  3WWM A;  2J4K A;  1OH9 A;  4JZ9 A;  3TVI A;  4F6T B;  1E19 A;  2BUF A;  2RD5 A;  2BRX A;  3S6G A;  3QUR A;  2J4J A;  2R8V A;  2AP9 A;  4JZ7 A;  2WE4 A;  2J5T A;  3LL9 A;  4NDQ A;  4NDR A;  3B8G A;  2BNE A;  2BMU A;  1YBD A;  3C1M A;  3K4O A;  2X2W A;  4KZT A;  3L76 A;  2E9Y A;  2V5H A;  4I49 A;  1GS5 A;  2HMF A;  3QVH A;  3ZZI A;  4USJ A;  2CDQ A;  2OGX B;  1GSJ A;  3C20 A;  3QVF A;  2JJX A;  3KZF A;  3NWY A;  4NDO A;  3EK6 A;  3LL5 A;  3QUO A;  3AAW A;  1B7B A;  2J0X A;  2VA1 A;  4F6T A;  2JI5 A;  4A7X A;  3WWN A;  2BND A;  3D41 A;  2OGX A;  3AB4 A;  2BRI A;  2V4Y A;  4NDP B;  3U6U A;  2J0W A;  4Q1T A;  2IJ9 A;  3EK5 A;  3S6K A;  1OHA A;  3ZZH A;  3LKK A;  3D40 A;  2J4L A;  1Z9D A;  3QUN A;  3AB2 A;  4NDP A;  1OHB A;  3D2P A;  4JZ8 A;  2J5V A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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