1OHBA

Acetylglutamate kinase from escherichia coli complexed with adp and sulphate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
b'MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohbA00
4OLCA 2AKOA 3AB2A 1Z9DA 2V5HA 3KZFA 2R98A 3D2MA 3B8GA 3L76A 4JZ8A 3TVIA 4AB7A 3ZZGA 2J0XA 2J0WA 3QVHA 2JJ4A 3T7BA 4A7WA 4AXSA 4A7XA 1OHBA 2JI5A 2BRXA 4KZTA 2J4LA 2HMFA 4F6TA 3D40A 3S6KA 3ZZIA 3AB4A 2W21A 4I49A 2BNEA 3K4OA 1GSJA 3LL5A 1E19A 3D41A 2V4YA 3QUOA 4NDQB 2OGXA 3ZZHA 4NDRB 2AP9A 3WWMA 1OH9A 3C20A 3QURA 3C1MA 3LL9A 2IJ9A 1GS5A 3LKKA 4NDOA 2VA1A 2BNDA 1YBDA 3EK6A 3EK5A 3QUNA 4NDPA 4JZ9A 1OHAA 2OGXB 2E9YA 2X2WA 2BNFA 3K52A 3ZZFA 1B7BA 2RD5A 2J5TA 2J4JA 3K4YA 4F6TB 2BUFA 2BTYA 4NDPB 3D2PA 3K56A 4JZ7A 2BRIA 2J4KA 3WWNA 3L86A 2JJXA 3C1NA 2WE5A 4Q1TA 2J5VA 3NWYA 2WXBA 3AAWA 2A1FA 3S6GA 2WE4A 3QVFA 3S6HA 4USJA 2CDQA 2R8VA 4NDQA 3U6UA 4NDRA 4NDOB 2BMUA
chains in the Genus database with same CATH superfamily
4OLCA 2AKOA 3AB2A 1Z9DA 2V5HA 3KZFA 2R98A 3D2MA 3B8GA 3L76A 4JZ8A 3TVIA 4AB7A 3ZZGA 2J0XA 2J0WA 3QVHA 2JJ4A 3T7BA 4A7WA 4AXSA 4A7XA 1OHBA 2JI5A 2BRXA 4KZTA 2J4LA 2HMFA 4F6TA 3D40A 3S6KA 3ZZIA 3AB4A 2W21A 4I49A 2BNEA 3K4OA 1GSJA 3LL5A 1E19A 3D41A 2V4YA 3QUOA 4NDQB 2OGXA 3ZZHA 4NDRB 2AP9A 3WWMA 1OH9A 3C20A 3QURA 3C1MA 3LL9A 2IJ9A 1GS5A 3LKKA 4NDOA 2VA1A 2BNDA 1YBDA 3EK6A 3EK5A 3QUNA 4NDPA 4JZ9A 1OHAA 2OGXB 2E9YA 2X2WA 2BNFA 3K52A 3ZZFA 1B7BA 2RD5A 2J5TA 2J4JA 3K4YA 4F6TB 2BUFA 2BTYA 4NDPB 3D2PA 3K56A 4JZ7A 2BRIA 2J4KA 3WWNA 3L86A 2JJXA 3C1NA 2WE5A 4Q1TA 2J5VA 3NWYA 2WXBA 3AAWA 2A1FA 3S6GA 2WE4A 3QVFA 3S6HA 4USJA 2CDQA 2R8VA 4NDQA 3U6UA 4NDRA 4NDOB 2BMUA
chains in the Genus database with same CATH topology
4OLCA 2AKOA 3AB2A 1Z9DA 2V5HA 3KZFA 2R98A 3D2MA 3B8GA 3L76A 4JZ8A 3TVIA 4AB7A 3ZZGA 2J0XA 2J0WA 3QVHA 2JJ4A 3T7BA 4A7WA 4AXSA 4A7XA 1OHBA 2JI5A 2BRXA 4KZTA 2J4LA 2HMFA 4F6TA 3D40A 3S6KA 3ZZIA 3AB4A 2W21A 4I49A 2BNEA 3K4OA 1GSJA 3LL5A 1E19A 3D41A 2V4YA 3QUOA 4NDQB 2OGXA 3ZZHA 4NDRB 2AP9A 3WWMA 1OH9A 3C20A 3QURA 3C1MA 3LL9A 2IJ9A 1GS5A 3LKKA 4NDOA 2VA1A 2BNDA 1YBDA 3EK6A 3EK5A 3QUNA 4NDPA 4JZ9A 1OHAA 2OGXB 2E9YA 2X2WA 2BNFA 3K52A 3ZZFA 1B7BA 2RD5A 2J5TA 2J4JA 3K4YA 4F6TB 2BUFA 2BTYA 4NDPB 3D2PA 3K56A 4JZ7A 2BRIA 2J4KA 3WWNA 3L86A 2JJXA 3C1NA 2WE5A 4Q1TA 2J5VA 3NWYA 2WXBA 3AAWA 2A1FA 3S6GA 2WE4A 3QVFA 3S6HA 4USJA 2CDQA 2R8VA 4NDQA 3U6UA 4NDRA 4NDOB 2BMUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4OLC A;  2AKO A;  3AB2 A;  1Z9D A;  2V5H A;  3KZF A;  2R98 A;  3D2M A;  3B8G A;  3L76 A;  4JZ8 A;  3TVI A;  4AB7 A;  3ZZG A;  2J0X A;  2J0W A;  3QVH A;  2JJ4 A;  3T7B A;  4A7W A;  4AXS A;  4A7X A;  1OHB A;  2JI5 A;  2BRX A;  4KZT A;  2J4L A;  2HMF A;  4F6T A;  3D40 A;  3S6K A;  3ZZI A;  3AB4 A;  2W21 A;  4I49 A;  2BNE A;  3K4O A;  1GSJ A;  3LL5 A;  1E19 A;  3D41 A;  2V4Y A;  3QUO A;  4NDQ B;  2OGX A;  3ZZH A;  4NDR B;  2AP9 A;  3WWM A;  1OH9 A;  3C20 A;  3QUR A;  3C1M A;  3LL9 A;  2IJ9 A;  1GS5 A;  3LKK A;  4NDO A;  2VA1 A;  2BND A;  1YBD A;  3EK6 A;  3EK5 A;  3QUN A;  4NDP A;  4JZ9 A;  1OHA A;  2OGX B;  2E9Y A;  2X2W A;  2BNF A;  3K52 A;  3ZZF A;  1B7B A;  2RD5 A;  2J5T A;  2J4J A;  3K4Y A;  4F6T B;  2BUF A;  2BTY A;  4NDP B;  3D2P A;  3K56 A;  4JZ7 A;  2BRI A;  2J4K A;  3WWN A;  3L86 A;  2JJX A;  3C1N A;  2WE5 A;  4Q1T A;  2J5V A;  3NWY A;  2WXB A;  3AAW A;  2A1F A;  3S6G A;  2WE4 A;  3QVF A;  3S6H A;  4USJ A;  2CDQ A;  2R8V A;  4NDQ A;  3U6U A;  4NDR A;  4NDO B;  2BMU A; 
#chains in the Genus database with same CATH topology
 4OLC A;  2AKO A;  3AB2 A;  1Z9D A;  2V5H A;  3KZF A;  2R98 A;  3D2M A;  3B8G A;  3L76 A;  4JZ8 A;  3TVI A;  4AB7 A;  3ZZG A;  2J0X A;  2J0W A;  3QVH A;  2JJ4 A;  3T7B A;  4A7W A;  4AXS A;  4A7X A;  1OHB A;  2JI5 A;  2BRX A;  4KZT A;  2J4L A;  2HMF A;  4F6T A;  3D40 A;  3S6K A;  3ZZI A;  3AB4 A;  2W21 A;  4I49 A;  2BNE A;  3K4O A;  1GSJ A;  3LL5 A;  1E19 A;  3D41 A;  2V4Y A;  3QUO A;  4NDQ B;  2OGX A;  3ZZH A;  4NDR B;  2AP9 A;  3WWM A;  1OH9 A;  3C20 A;  3QUR A;  3C1M A;  3LL9 A;  2IJ9 A;  1GS5 A;  3LKK A;  4NDO A;  2VA1 A;  2BND A;  1YBD A;  3EK6 A;  3EK5 A;  3QUN A;  4NDP A;  4JZ9 A;  1OHA A;  2OGX B;  2E9Y A;  2X2W A;  2BNF A;  3K52 A;  3ZZF A;  1B7B A;  2RD5 A;  2J5T A;  2J4J A;  3K4Y A;  4F6T B;  2BUF A;  2BTY A;  4NDP B;  3D2P A;  3K56 A;  4JZ7 A;  2BRI A;  2J4K A;  3WWN A;  3L86 A;  2JJX A;  3C1N A;  2WE5 A;  4Q1T A;  2J5V A;  3NWY A;  2WXB A;  3AAW A;  2A1F A;  3S6G A;  2WE4 A;  3QVF A;  3S6H A;  4USJ A;  2CDQ A;  2R8V A;  4NDQ A;  3U6U A;  4NDR A;  4NDO B;  2BMU A; 
#chains in the Genus database with same CATH homology
 4OLC A;  2AKO A;  3AB2 A;  1Z9D A;  2V5H A;  3KZF A;  2R98 A;  3D2M A;  3B8G A;  3L76 A;  4JZ8 A;  3TVI A;  4AB7 A;  3ZZG A;  2J0X A;  2J0W A;  3QVH A;  2JJ4 A;  3T7B A;  4A7W A;  4AXS A;  4A7X A;  1OHB A;  2JI5 A;  2BRX A;  4KZT A;  2J4L A;  2HMF A;  4F6T A;  3D40 A;  3S6K A;  3ZZI A;  3AB4 A;  2W21 A;  4I49 A;  2BNE A;  3K4O A;  1GSJ A;  3LL5 A;  1E19 A;  3D41 A;  2V4Y A;  3QUO A;  4NDQ B;  2OGX A;  3ZZH A;  4NDR B;  2AP9 A;  3WWM A;  1OH9 A;  3C20 A;  3QUR A;  3C1M A;  3LL9 A;  2IJ9 A;  1GS5 A;  3LKK A;  4NDO A;  2VA1 A;  2BND A;  1YBD A;  3EK6 A;  3EK5 A;  3QUN A;  4NDP A;  4JZ9 A;  1OHA A;  2OGX B;  2E9Y A;  2X2W A;  2BNF A;  3K52 A;  3ZZF A;  1B7B A;  2RD5 A;  2J5T A;  2J4J A;  3K4Y A;  4F6T B;  2BUF A;  2BTY A;  4NDP B;  3D2P A;  3K56 A;  4JZ7 A;  2BRI A;  2J4K A;  3WWN A;  3L86 A;  2JJX A;  3C1N A;  2WE5 A;  4Q1T A;  2J5V A;  3NWY A;  2WXB A;  3AAW A;  2A1F A;  3S6G A;  2WE4 A;  3QVF A;  3S6H A;  4USJ A;  2CDQ A;  2R8V A;  4NDQ A;  3U6U A;  4NDR A;  4NDO B;  2BMU A; 
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similar chains in the pdb database (?% sequence similarity)

 
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