1OHBA

Acetylglutamate kinase from escherichia coli complexed with adp and sulphate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohbA00
2BRXA 1GSJA 3D40A 3D2MA 1B7BA 3S6KA 2J4LA 2R8VA 3T7BA 2IJ9A 2V5HA 2WE4A 2BTYA 4F6TA 4NDPA 3K52A 4F6TB 4NDOA 3B8GA 2JI5A 3WWNA 4NDOB 3K56A 2AKOA 4KZTA 2CDQA 3S6GA 1YBDA 3QUOA 4AB7A 2WE5A 3C1NA 3QURA 4NDQA 3TVIA 4AXSA 4NDQB 3C1MA 3U6UA 3QVHA 2WXBA 2JJXA 2BUFA 2E9YA 2X2WA 4JZ7A 2VA1A 4USJA 3L76A 2J0XA 2OGXA 2J5TA 3AB2A 2BNFA 2A1FA 2OGXB 2J0WA 3S6HA 1OHAA 4A7XA 2JJ4A 4JZ9A 3EK5A 2J4JA 3KZFA 1OH9A 3QVFA 3QUNA 4Q1TA 2J5VA 2HMFA 3ZZFA 3NWYA 2BNDA 4NDRA 1OHBA 4NDRB 2AP9A 3LL5A 3C20A 3D41A 3K4YA 3K4OA 3EK6A 2BNEA 2V4YA 4JZ8A 3L86A 4I49A 4A7WA 3AB4A 1E19A 2J4KA 3LL9A 2BRIA 3D2PA 3ZZGA 2W21A 4NDPB 3ZZHA 3LKKA 2R98A 3ZZIA 3WWMA 1Z9DA 1GS5A 4OLCA 2BMUA 3AAWA 2RD5A
chains in the Genus database with same CATH superfamily
2BRXA 1GSJA 3D40A 3D2MA 1B7BA 3S6KA 2J4LA 2R8VA 3T7BA 2IJ9A 2V5HA 2WE4A 2BTYA 4F6TA 4NDPA 3K52A 4F6TB 4NDOA 3B8GA 2JI5A 3WWNA 4NDOB 3K56A 2AKOA 4KZTA 2CDQA 3S6GA 1YBDA 3QUOA 4AB7A 2WE5A 3C1NA 3QURA 4NDQA 3TVIA 4AXSA 4NDQB 3C1MA 3U6UA 3QVHA 2WXBA 2JJXA 2BUFA 2E9YA 2X2WA 4JZ7A 2VA1A 4USJA 3L76A 2J0XA 2OGXA 2J5TA 3AB2A 2BNFA 2A1FA 2OGXB 2J0WA 3S6HA 1OHAA 4A7XA 2JJ4A 4JZ9A 3EK5A 2J4JA 3KZFA 1OH9A 3QVFA 3QUNA 4Q1TA 2J5VA 2HMFA 3ZZFA 3NWYA 2BNDA 4NDRA 1OHBA 4NDRB 2AP9A 3LL5A 3C20A 3D41A 3K4YA 3K4OA 3EK6A 2BNEA 2V4YA 4JZ8A 3L86A 4I49A 4A7WA 3AB4A 1E19A 2J4KA 3LL9A 2BRIA 3D2PA 3ZZGA 2W21A 4NDPB 3ZZHA 3LKKA 2R98A 3ZZIA 3WWMA 1Z9DA 1GS5A 4OLCA 2BMUA 3AAWA 2RD5A
chains in the Genus database with same CATH topology
2BRXA 1GSJA 3D40A 3D2MA 1B7BA 3S6KA 2J4LA 2R8VA 3T7BA 2IJ9A 2V5HA 2WE4A 2BTYA 4F6TA 4NDPA 3K52A 4F6TB 4NDOA 3B8GA 2JI5A 3WWNA 4NDOB 3K56A 2AKOA 4KZTA 2CDQA 3S6GA 1YBDA 3QUOA 4AB7A 2WE5A 3C1NA 3QURA 4NDQA 3TVIA 4AXSA 4NDQB 3C1MA 3U6UA 3QVHA 2WXBA 2JJXA 2BUFA 2E9YA 2X2WA 4JZ7A 2VA1A 4USJA 3L76A 2J0XA 2OGXA 2J5TA 3AB2A 2BNFA 2A1FA 2OGXB 2J0WA 3S6HA 1OHAA 4A7XA 2JJ4A 4JZ9A 3EK5A 2J4JA 3KZFA 1OH9A 3QVFA 3QUNA 4Q1TA 2J5VA 2HMFA 3ZZFA 3NWYA 2BNDA 4NDRA 1OHBA 4NDRB 2AP9A 3LL5A 3C20A 3D41A 3K4YA 3K4OA 3EK6A 2BNEA 2V4YA 4JZ8A 3L86A 4I49A 4A7WA 3AB4A 1E19A 2J4KA 3LL9A 2BRIA 3D2PA 3ZZGA 2W21A 4NDPB 3ZZHA 3LKKA 2R98A 3ZZIA 3WWMA 1Z9DA 1GS5A 4OLCA 2BMUA 3AAWA 2RD5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BRX A;  1GSJ A;  3D40 A;  3D2M A;  1B7B A;  3S6K A;  2J4L A;  2R8V A;  3T7B A;  2IJ9 A;  2V5H A;  2WE4 A;  2BTY A;  4F6T A;  4NDP A;  3K52 A;  4F6T B;  4NDO A;  3B8G A;  2JI5 A;  3WWN A;  4NDO B;  3K56 A;  2AKO A;  4KZT A;  2CDQ A;  3S6G A;  1YBD A;  3QUO A;  4AB7 A;  2WE5 A;  3C1N A;  3QUR A;  4NDQ A;  3TVI A;  4AXS A;  4NDQ B;  3C1M A;  3U6U A;  3QVH A;  2WXB A;  2JJX A;  2BUF A;  2E9Y A;  2X2W A;  4JZ7 A;  2VA1 A;  4USJ A;  3L76 A;  2J0X A;  2OGX A;  2J5T A;  3AB2 A;  2BNF A;  2A1F A;  2OGX B;  2J0W A;  3S6H A;  1OHA A;  4A7X A;  2JJ4 A;  4JZ9 A;  3EK5 A;  2J4J A;  3KZF A;  1OH9 A;  3QVF A;  3QUN A;  4Q1T A;  2J5V A;  2HMF A;  3ZZF A;  3NWY A;  2BND A;  4NDR A;  1OHB A;  4NDR B;  2AP9 A;  3LL5 A;  3C20 A;  3D41 A;  3K4Y A;  3K4O A;  3EK6 A;  2BNE A;  2V4Y A;  4JZ8 A;  3L86 A;  4I49 A;  4A7W A;  3AB4 A;  1E19 A;  2J4K A;  3LL9 A;  2BRI A;  3D2P A;  3ZZG A;  2W21 A;  4NDP B;  3ZZH A;  3LKK A;  2R98 A;  3ZZI A;  3WWM A;  1Z9D A;  1GS5 A;  4OLC A;  2BMU A;  3AAW A;  2RD5 A; 
#chains in the Genus database with same CATH topology
 2BRX A;  1GSJ A;  3D40 A;  3D2M A;  1B7B A;  3S6K A;  2J4L A;  2R8V A;  3T7B A;  2IJ9 A;  2V5H A;  2WE4 A;  2BTY A;  4F6T A;  4NDP A;  3K52 A;  4F6T B;  4NDO A;  3B8G A;  2JI5 A;  3WWN A;  4NDO B;  3K56 A;  2AKO A;  4KZT A;  2CDQ A;  3S6G A;  1YBD A;  3QUO A;  4AB7 A;  2WE5 A;  3C1N A;  3QUR A;  4NDQ A;  3TVI A;  4AXS A;  4NDQ B;  3C1M A;  3U6U A;  3QVH A;  2WXB A;  2JJX A;  2BUF A;  2E9Y A;  2X2W A;  4JZ7 A;  2VA1 A;  4USJ A;  3L76 A;  2J0X A;  2OGX A;  2J5T A;  3AB2 A;  2BNF A;  2A1F A;  2OGX B;  2J0W A;  3S6H A;  1OHA A;  4A7X A;  2JJ4 A;  4JZ9 A;  3EK5 A;  2J4J A;  3KZF A;  1OH9 A;  3QVF A;  3QUN A;  4Q1T A;  2J5V A;  2HMF A;  3ZZF A;  3NWY A;  2BND A;  4NDR A;  1OHB A;  4NDR B;  2AP9 A;  3LL5 A;  3C20 A;  3D41 A;  3K4Y A;  3K4O A;  3EK6 A;  2BNE A;  2V4Y A;  4JZ8 A;  3L86 A;  4I49 A;  4A7W A;  3AB4 A;  1E19 A;  2J4K A;  3LL9 A;  2BRI A;  3D2P A;  3ZZG A;  2W21 A;  4NDP B;  3ZZH A;  3LKK A;  2R98 A;  3ZZI A;  3WWM A;  1Z9D A;  1GS5 A;  4OLC A;  2BMU A;  3AAW A;  2RD5 A; 
#chains in the Genus database with same CATH homology
 2BRX A;  1GSJ A;  3D40 A;  3D2M A;  1B7B A;  3S6K A;  2J4L A;  2R8V A;  3T7B A;  2IJ9 A;  2V5H A;  2WE4 A;  2BTY A;  4F6T A;  4NDP A;  3K52 A;  4F6T B;  4NDO A;  3B8G A;  2JI5 A;  3WWN A;  4NDO B;  3K56 A;  2AKO A;  4KZT A;  2CDQ A;  3S6G A;  1YBD A;  3QUO A;  4AB7 A;  2WE5 A;  3C1N A;  3QUR A;  4NDQ A;  3TVI A;  4AXS A;  4NDQ B;  3C1M A;  3U6U A;  3QVH A;  2WXB A;  2JJX A;  2BUF A;  2E9Y A;  2X2W A;  4JZ7 A;  2VA1 A;  4USJ A;  3L76 A;  2J0X A;  2OGX A;  2J5T A;  3AB2 A;  2BNF A;  2A1F A;  2OGX B;  2J0W A;  3S6H A;  1OHA A;  4A7X A;  2JJ4 A;  4JZ9 A;  3EK5 A;  2J4J A;  3KZF A;  1OH9 A;  3QVF A;  3QUN A;  4Q1T A;  2J5V A;  2HMF A;  3ZZF A;  3NWY A;  2BND A;  4NDR A;  1OHB A;  4NDR B;  2AP9 A;  3LL5 A;  3C20 A;  3D41 A;  3K4Y A;  3K4O A;  3EK6 A;  2BNE A;  2V4Y A;  4JZ8 A;  3L86 A;  4I49 A;  4A7W A;  3AB4 A;  1E19 A;  2J4K A;  3LL9 A;  2BRI A;  3D2P A;  3ZZG A;  2W21 A;  4NDP B;  3ZZH A;  3LKK A;  2R98 A;  3ZZI A;  3WWM A;  1Z9D A;  1GS5 A;  4OLC A;  2BMU A;  3AAW A;  2RD5 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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