1OHBA

Acetylglutamate kinase from escherichia coli complexed with adp and sulphate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
molecule tags Kinase
source organism Escherichia coli bl21(de3)
molecule keywords ACETYLGLUTAMATE KINASE
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohbA00
3S6GA 2OGXB 3ZZIA 2OGXA 2IJ9A 2J5VA 1OH9A 3T7BA 3WWMA 2W21A 4USJA 2R8VA 2JJ4A 2BMUA 3D2MA 2AKOA 2BRIA 2BRXA 3ZZGA 1B7BA 3C1MA 3LL9A 3S6HA 3ZZHA 2BUFA 3KZFA 2J0XA 4Q1TA 3S6KA 3AB4A 2VA1A 3L76A 2RD5A 3TVIA 3ZZFA 4NDOB 3EK6A 4JZ9A 1GS5A 3EK5A 2R98A 4NDOA 4AB7A 2BNDA 3C1NA 2WE5A 4NDRB 3L86A 2E9YA 4NDRA 2WXBA 2CDQA 4JZ8A 1Z9DA 1E19A 3NWYA 2A1FA 2J4KA 3D40A 3D41A 3QUOA 2J0WA 4KZTA 2BNEA 4AXSA 4A7WA 2HMFA 3K52A 4JZ7A 2JI5A 2JJXA 2AP9A 2V4YA 2WE4A 3LL5A 3QURA 4A7XA 2X2WA 3B8GA 3U6UA 3AAWA 3QUNA 4NDPB 2J4LA 3D2PA 4NDPA 3K4YA 3LKKA 4NDQB 2BNFA 2J4JA 4NDQA 3C20A 4OLCA 2BTYA 3K4OA 4I49A 3WWNA 3QVHA 3QVFA 4F6TB 3AB2A 4F6TA 3K56A 1GSJA 2V5HA 2J5TA 1OHAA 1OHBA 1YBDA
chains in the Genus database with same CATH superfamily
3S6GA 2OGXB 3ZZIA 2OGXA 2IJ9A 2J5VA 1OH9A 3T7BA 3WWMA 2W21A 4USJA 2R8VA 2JJ4A 2BMUA 3D2MA 2AKOA 2BRIA 2BRXA 3ZZGA 1B7BA 3C1MA 3LL9A 3S6HA 3ZZHA 2BUFA 3KZFA 2J0XA 4Q1TA 3S6KA 3AB4A 2VA1A 3L76A 2RD5A 3TVIA 3ZZFA 4NDOB 3EK6A 4JZ9A 1GS5A 3EK5A 2R98A 4NDOA 4AB7A 2BNDA 3C1NA 2WE5A 4NDRB 3L86A 2E9YA 4NDRA 2WXBA 2CDQA 4JZ8A 1Z9DA 1E19A 3NWYA 2A1FA 2J4KA 3D40A 3D41A 3QUOA 2J0WA 4KZTA 2BNEA 4AXSA 4A7WA 2HMFA 3K52A 4JZ7A 2JI5A 2JJXA 2AP9A 2V4YA 2WE4A 3LL5A 3QURA 4A7XA 2X2WA 3B8GA 3U6UA 3AAWA 3QUNA 4NDPB 2J4LA 3D2PA 4NDPA 3K4YA 3LKKA 4NDQB 2BNFA 2J4JA 4NDQA 3C20A 4OLCA 2BTYA 3K4OA 4I49A 3WWNA 3QVHA 3QVFA 4F6TB 3AB2A 4F6TA 3K56A 1GSJA 2V5HA 2J5TA 1OHAA 1OHBA 1YBDA
chains in the Genus database with same CATH topology
3S6GA 2OGXB 3ZZIA 2OGXA 2IJ9A 2J5VA 1OH9A 3T7BA 3WWMA 2W21A 4USJA 2R8VA 2JJ4A 2BMUA 3D2MA 2AKOA 2BRIA 2BRXA 3ZZGA 1B7BA 3C1MA 3LL9A 3S6HA 3ZZHA 2BUFA 3KZFA 2J0XA 4Q1TA 3S6KA 3AB4A 2VA1A 3L76A 2RD5A 3TVIA 3ZZFA 4NDOB 3EK6A 4JZ9A 1GS5A 3EK5A 2R98A 4NDOA 4AB7A 2BNDA 3C1NA 2WE5A 4NDRB 3L86A 2E9YA 4NDRA 2WXBA 2CDQA 4JZ8A 1Z9DA 1E19A 3NWYA 2A1FA 2J4KA 3D40A 3D41A 3QUOA 2J0WA 4KZTA 2BNEA 4AXSA 4A7WA 2HMFA 3K52A 4JZ7A 2JI5A 2JJXA 2AP9A 2V4YA 2WE4A 3LL5A 3QURA 4A7XA 2X2WA 3B8GA 3U6UA 3AAWA 3QUNA 4NDPB 2J4LA 3D2PA 4NDPA 3K4YA 3LKKA 4NDQB 2BNFA 2J4JA 4NDQA 3C20A 4OLCA 2BTYA 3K4OA 4I49A 3WWNA 3QVHA 3QVFA 4F6TB 3AB2A 4F6TA 3K56A 1GSJA 2V5HA 2J5TA 1OHAA 1OHBA 1YBDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S6G A;  2OGX B;  3ZZI A;  2OGX A;  2IJ9 A;  2J5V A;  1OH9 A;  3T7B A;  3WWM A;  2W21 A;  4USJ A;  2R8V A;  2JJ4 A;  2BMU A;  3D2M A;  2AKO A;  2BRI A;  2BRX A;  3ZZG A;  1B7B A;  3C1M A;  3LL9 A;  3S6H A;  3ZZH A;  2BUF A;  3KZF A;  2J0X A;  4Q1T A;  3S6K A;  3AB4 A;  2VA1 A;  3L76 A;  2RD5 A;  3TVI A;  3ZZF A;  4NDO B;  3EK6 A;  4JZ9 A;  1GS5 A;  3EK5 A;  2R98 A;  4NDO A;  4AB7 A;  2BND A;  3C1N A;  2WE5 A;  4NDR B;  3L86 A;  2E9Y A;  4NDR A;  2WXB A;  2CDQ A;  4JZ8 A;  1Z9D A;  1E19 A;  3NWY A;  2A1F A;  2J4K A;  3D40 A;  3D41 A;  3QUO A;  2J0W A;  4KZT A;  2BNE A;  4AXS A;  4A7W A;  2HMF A;  3K52 A;  4JZ7 A;  2JI5 A;  2JJX A;  2AP9 A;  2V4Y A;  2WE4 A;  3LL5 A;  3QUR A;  4A7X A;  2X2W A;  3B8G A;  3U6U A;  3AAW A;  3QUN A;  4NDP B;  2J4L A;  3D2P A;  4NDP A;  3K4Y A;  3LKK A;  4NDQ B;  2BNF A;  2J4J A;  4NDQ A;  3C20 A;  4OLC A;  2BTY A;  3K4O A;  4I49 A;  3WWN A;  3QVH A;  3QVF A;  4F6T B;  3AB2 A;  4F6T A;  3K56 A;  1GSJ A;  2V5H A;  2J5T A;  1OHA A;  1OHB A;  1YBD A; 
#chains in the Genus database with same CATH topology
 3S6G A;  2OGX B;  3ZZI A;  2OGX A;  2IJ9 A;  2J5V A;  1OH9 A;  3T7B A;  3WWM A;  2W21 A;  4USJ A;  2R8V A;  2JJ4 A;  2BMU A;  3D2M A;  2AKO A;  2BRI A;  2BRX A;  3ZZG A;  1B7B A;  3C1M A;  3LL9 A;  3S6H A;  3ZZH A;  2BUF A;  3KZF A;  2J0X A;  4Q1T A;  3S6K A;  3AB4 A;  2VA1 A;  3L76 A;  2RD5 A;  3TVI A;  3ZZF A;  4NDO B;  3EK6 A;  4JZ9 A;  1GS5 A;  3EK5 A;  2R98 A;  4NDO A;  4AB7 A;  2BND A;  3C1N A;  2WE5 A;  4NDR B;  3L86 A;  2E9Y A;  4NDR A;  2WXB A;  2CDQ A;  4JZ8 A;  1Z9D A;  1E19 A;  3NWY A;  2A1F A;  2J4K A;  3D40 A;  3D41 A;  3QUO A;  2J0W A;  4KZT A;  2BNE A;  4AXS A;  4A7W A;  2HMF A;  3K52 A;  4JZ7 A;  2JI5 A;  2JJX A;  2AP9 A;  2V4Y A;  2WE4 A;  3LL5 A;  3QUR A;  4A7X A;  2X2W A;  3B8G A;  3U6U A;  3AAW A;  3QUN A;  4NDP B;  2J4L A;  3D2P A;  4NDP A;  3K4Y A;  3LKK A;  4NDQ B;  2BNF A;  2J4J A;  4NDQ A;  3C20 A;  4OLC A;  2BTY A;  3K4O A;  4I49 A;  3WWN A;  3QVH A;  3QVF A;  4F6T B;  3AB2 A;  4F6T A;  3K56 A;  1GSJ A;  2V5H A;  2J5T A;  1OHA A;  1OHB A;  1YBD A; 
#chains in the Genus database with same CATH homology
 3S6G A;  2OGX B;  3ZZI A;  2OGX A;  2IJ9 A;  2J5V A;  1OH9 A;  3T7B A;  3WWM A;  2W21 A;  4USJ A;  2R8V A;  2JJ4 A;  2BMU A;  3D2M A;  2AKO A;  2BRI A;  2BRX A;  3ZZG A;  1B7B A;  3C1M A;  3LL9 A;  3S6H A;  3ZZH A;  2BUF A;  3KZF A;  2J0X A;  4Q1T A;  3S6K A;  3AB4 A;  2VA1 A;  3L76 A;  2RD5 A;  3TVI A;  3ZZF A;  4NDO B;  3EK6 A;  4JZ9 A;  1GS5 A;  3EK5 A;  2R98 A;  4NDO A;  4AB7 A;  2BND A;  3C1N A;  2WE5 A;  4NDR B;  3L86 A;  2E9Y A;  4NDR A;  2WXB A;  2CDQ A;  4JZ8 A;  1Z9D A;  1E19 A;  3NWY A;  2A1F A;  2J4K A;  3D40 A;  3D41 A;  3QUO A;  2J0W A;  4KZT A;  2BNE A;  4AXS A;  4A7W A;  2HMF A;  3K52 A;  4JZ7 A;  2JI5 A;  2JJX A;  2AP9 A;  2V4Y A;  2WE4 A;  3LL5 A;  3QUR A;  4A7X A;  2X2W A;  3B8G A;  3U6U A;  3AAW A;  3QUN A;  4NDP B;  2J4L A;  3D2P A;  4NDP A;  3K4Y A;  3LKK A;  4NDQ B;  2BNF A;  2J4J A;  4NDQ A;  3C20 A;  4OLC A;  2BTY A;  3K4O A;  4I49 A;  3WWN A;  3QVH A;  3QVF A;  4F6T B;  3AB2 A;  4F6T A;  3K56 A;  1GSJ A;  2V5H A;  2J5T A;  1OHA A;  1OHB A;  1YBD A; 
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similar chains in the Genus database (?% sequence similarity)
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