1OHBA

Acetylglutamate kinase from escherichia coli complexed with adp and sulphate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohbA00
1E19A 3K4OA 2BNDA 2JJXA 1YBDA 2E9YA 3K4YA 3ZZGA 3D2MA 2IJ9A 3D2PA 4NDRA 2BUFA 4NDOB 4I49A 2BRXA 4NDPB 2X2WA 3AB4A 2WE5A 2CDQA 2AKOA 1Z9DA 2J5VA 3AAWA 1OHAA 2J0XA 2J5TA 4NDQB 4NDOA 1OH9A 4NDPA 3D40A 3K52A 3ZZHA 2J0WA 3QVHA 4AB7A 3NWYA 3LL5A 3WWNA 2BTYA 3C20A 2J4LA 3S6GA 3L76A 4JZ7A 3U6UA 4NDQA 3T7BA 2HMFA 2BNFA 2A1FA 3WWMA 3C1NA 1GS5A 3AB2A 3EK5A 3K56A 2VA1A 2J4KA 1B7BA 2JJ4A 4JZ9A 4AXSA 2BRIA 4Q1TA 3B8GA 3D41A 4JZ8A 1GSJA 2R98A 3EK6A 2V4YA 2BNEA 2J4JA 3TVIA 2BMUA 2JI5A 3QURA 4F6TB 3KZFA 3L86A 4KZTA 3LKKA 2RD5A 2WXBA 2OGXB 3QUOA 3LL9A 4A7XA 1OHBA 4USJA 3C1MA 3QVFA 3S6KA 4F6TA 4OLCA 3S6HA 2V5HA 2OGXA 2W21A 3ZZFA 3ZZIA 4A7WA 4NDRB 3QUNA 2WE4A 2R8VA 2AP9A
chains in the Genus database with same CATH superfamily
1E19A 3K4OA 2BNDA 2JJXA 1YBDA 2E9YA 3K4YA 3ZZGA 3D2MA 2IJ9A 3D2PA 4NDRA 2BUFA 4NDOB 4I49A 2BRXA 4NDPB 2X2WA 3AB4A 2WE5A 2CDQA 2AKOA 1Z9DA 2J5VA 3AAWA 1OHAA 2J0XA 2J5TA 4NDQB 4NDOA 1OH9A 4NDPA 3D40A 3K52A 3ZZHA 2J0WA 3QVHA 4AB7A 3NWYA 3LL5A 3WWNA 2BTYA 3C20A 2J4LA 3S6GA 3L76A 4JZ7A 3U6UA 4NDQA 3T7BA 2HMFA 2BNFA 2A1FA 3WWMA 3C1NA 1GS5A 3AB2A 3EK5A 3K56A 2VA1A 2J4KA 1B7BA 2JJ4A 4JZ9A 4AXSA 2BRIA 4Q1TA 3B8GA 3D41A 4JZ8A 1GSJA 2R98A 3EK6A 2V4YA 2BNEA 2J4JA 3TVIA 2BMUA 2JI5A 3QURA 4F6TB 3KZFA 3L86A 4KZTA 3LKKA 2RD5A 2WXBA 2OGXB 3QUOA 3LL9A 4A7XA 1OHBA 4USJA 3C1MA 3QVFA 3S6KA 4F6TA 4OLCA 3S6HA 2V5HA 2OGXA 2W21A 3ZZFA 3ZZIA 4A7WA 4NDRB 3QUNA 2WE4A 2R8VA 2AP9A
chains in the Genus database with same CATH topology
1E19A 3K4OA 2BNDA 2JJXA 1YBDA 2E9YA 3K4YA 3ZZGA 3D2MA 2IJ9A 3D2PA 4NDRA 2BUFA 4NDOB 4I49A 2BRXA 4NDPB 2X2WA 3AB4A 2WE5A 2CDQA 2AKOA 1Z9DA 2J5VA 3AAWA 1OHAA 2J0XA 2J5TA 4NDQB 4NDOA 1OH9A 4NDPA 3D40A 3K52A 3ZZHA 2J0WA 3QVHA 4AB7A 3NWYA 3LL5A 3WWNA 2BTYA 3C20A 2J4LA 3S6GA 3L76A 4JZ7A 3U6UA 4NDQA 3T7BA 2HMFA 2BNFA 2A1FA 3WWMA 3C1NA 1GS5A 3AB2A 3EK5A 3K56A 2VA1A 2J4KA 1B7BA 2JJ4A 4JZ9A 4AXSA 2BRIA 4Q1TA 3B8GA 3D41A 4JZ8A 1GSJA 2R98A 3EK6A 2V4YA 2BNEA 2J4JA 3TVIA 2BMUA 2JI5A 3QURA 4F6TB 3KZFA 3L86A 4KZTA 3LKKA 2RD5A 2WXBA 2OGXB 3QUOA 3LL9A 4A7XA 1OHBA 4USJA 3C1MA 3QVFA 3S6KA 4F6TA 4OLCA 3S6HA 2V5HA 2OGXA 2W21A 3ZZFA 3ZZIA 4A7WA 4NDRB 3QUNA 2WE4A 2R8VA 2AP9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E19 A;  3K4O A;  2BND A;  2JJX A;  1YBD A;  2E9Y A;  3K4Y A;  3ZZG A;  3D2M A;  2IJ9 A;  3D2P A;  4NDR A;  2BUF A;  4NDO B;  4I49 A;  2BRX A;  4NDP B;  2X2W A;  3AB4 A;  2WE5 A;  2CDQ A;  2AKO A;  1Z9D A;  2J5V A;  3AAW A;  1OHA A;  2J0X A;  2J5T A;  4NDQ B;  4NDO A;  1OH9 A;  4NDP A;  3D40 A;  3K52 A;  3ZZH A;  2J0W A;  3QVH A;  4AB7 A;  3NWY A;  3LL5 A;  3WWN A;  2BTY A;  3C20 A;  2J4L A;  3S6G A;  3L76 A;  4JZ7 A;  3U6U A;  4NDQ A;  3T7B A;  2HMF A;  2BNF A;  2A1F A;  3WWM A;  3C1N A;  1GS5 A;  3AB2 A;  3EK5 A;  3K56 A;  2VA1 A;  2J4K A;  1B7B A;  2JJ4 A;  4JZ9 A;  4AXS A;  2BRI A;  4Q1T A;  3B8G A;  3D41 A;  4JZ8 A;  1GSJ A;  2R98 A;  3EK6 A;  2V4Y A;  2BNE A;  2J4J A;  3TVI A;  2BMU A;  2JI5 A;  3QUR A;  4F6T B;  3KZF A;  3L86 A;  4KZT A;  3LKK A;  2RD5 A;  2WXB A;  2OGX B;  3QUO A;  3LL9 A;  4A7X A;  1OHB A;  4USJ A;  3C1M A;  3QVF A;  3S6K A;  4F6T A;  4OLC A;  3S6H A;  2V5H A;  2OGX A;  2W21 A;  3ZZF A;  3ZZI A;  4A7W A;  4NDR B;  3QUN A;  2WE4 A;  2R8V A;  2AP9 A; 
#chains in the Genus database with same CATH topology
 1E19 A;  3K4O A;  2BND A;  2JJX A;  1YBD A;  2E9Y A;  3K4Y A;  3ZZG A;  3D2M A;  2IJ9 A;  3D2P A;  4NDR A;  2BUF A;  4NDO B;  4I49 A;  2BRX A;  4NDP B;  2X2W A;  3AB4 A;  2WE5 A;  2CDQ A;  2AKO A;  1Z9D A;  2J5V A;  3AAW A;  1OHA A;  2J0X A;  2J5T A;  4NDQ B;  4NDO A;  1OH9 A;  4NDP A;  3D40 A;  3K52 A;  3ZZH A;  2J0W A;  3QVH A;  4AB7 A;  3NWY A;  3LL5 A;  3WWN A;  2BTY A;  3C20 A;  2J4L A;  3S6G A;  3L76 A;  4JZ7 A;  3U6U A;  4NDQ A;  3T7B A;  2HMF A;  2BNF A;  2A1F A;  3WWM A;  3C1N A;  1GS5 A;  3AB2 A;  3EK5 A;  3K56 A;  2VA1 A;  2J4K A;  1B7B A;  2JJ4 A;  4JZ9 A;  4AXS A;  2BRI A;  4Q1T A;  3B8G A;  3D41 A;  4JZ8 A;  1GSJ A;  2R98 A;  3EK6 A;  2V4Y A;  2BNE A;  2J4J A;  3TVI A;  2BMU A;  2JI5 A;  3QUR A;  4F6T B;  3KZF A;  3L86 A;  4KZT A;  3LKK A;  2RD5 A;  2WXB A;  2OGX B;  3QUO A;  3LL9 A;  4A7X A;  1OHB A;  4USJ A;  3C1M A;  3QVF A;  3S6K A;  4F6T A;  4OLC A;  3S6H A;  2V5H A;  2OGX A;  2W21 A;  3ZZF A;  3ZZI A;  4A7W A;  4NDR B;  3QUN A;  2WE4 A;  2R8V A;  2AP9 A; 
#chains in the Genus database with same CATH homology
 1E19 A;  3K4O A;  2BND A;  2JJX A;  1YBD A;  2E9Y A;  3K4Y A;  3ZZG A;  3D2M A;  2IJ9 A;  3D2P A;  4NDR A;  2BUF A;  4NDO B;  4I49 A;  2BRX A;  4NDP B;  2X2W A;  3AB4 A;  2WE5 A;  2CDQ A;  2AKO A;  1Z9D A;  2J5V A;  3AAW A;  1OHA A;  2J0X A;  2J5T A;  4NDQ B;  4NDO A;  1OH9 A;  4NDP A;  3D40 A;  3K52 A;  3ZZH A;  2J0W A;  3QVH A;  4AB7 A;  3NWY A;  3LL5 A;  3WWN A;  2BTY A;  3C20 A;  2J4L A;  3S6G A;  3L76 A;  4JZ7 A;  3U6U A;  4NDQ A;  3T7B A;  2HMF A;  2BNF A;  2A1F A;  3WWM A;  3C1N A;  1GS5 A;  3AB2 A;  3EK5 A;  3K56 A;  2VA1 A;  2J4K A;  1B7B A;  2JJ4 A;  4JZ9 A;  4AXS A;  2BRI A;  4Q1T A;  3B8G A;  3D41 A;  4JZ8 A;  1GSJ A;  2R98 A;  3EK6 A;  2V4Y A;  2BNE A;  2J4J A;  3TVI A;  2BMU A;  2JI5 A;  3QUR A;  4F6T B;  3KZF A;  3L86 A;  4KZT A;  3LKK A;  2RD5 A;  2WXB A;  2OGX B;  3QUO A;  3LL9 A;  4A7X A;  1OHB A;  4USJ A;  3C1M A;  3QVF A;  3S6K A;  4F6T A;  4OLC A;  3S6H A;  2V5H A;  2OGX A;  2W21 A;  3ZZF A;  3ZZI A;  4A7W A;  4NDR B;  3QUN A;  2WE4 A;  2R8V A;  2AP9 A; 
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