1OHBA

Acetylglutamate kinase from escherichia coli complexed with adp and sulphate
Total Genus 86
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
publication title The Course of Phosphorus in the Reaction of N-Acetyl-L-Glutamate Kinase, Determined from the Structures of Crystalline Complexes, Including a Complex with an Alf(4)(-) Transition State Mimic
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
total genus 86
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2003-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1ohbA00
3S6GA 2J4LA 3ZZHA 3NWYA 2X2WA 3L76A 2BNDA 1E19A 2CDQA 3K4YA 2J4KA 2V5HA 2BMUA 3WWMA 3S6KA 2WE4A 2BNFA 3QUOA 2E9YA 4JZ9A 3LL9A 3AB4A 4NDRB 3LL5A 3AB2A 3QVFA 2R8VA 2J0WA 2AKOA 4OLCA 2RD5A 4A7XA 3L86A 1YBDA 3LKKA 4F6TA 3K4OA 4NDOB 2J5VA 2V4YA 2BRIA 3TVIA 1OH9A 2JJXA 3B8GA 4AB7A 2A1FA 1Z9DA 3K52A 4NDQB 2J0XA 3QURA 3ZZIA 2AP9A 2WXBA 2JI5A 4NDPA 3EK6A 4A7WA 2BRXA 2VA1A 3K56A 2OGXB 3C1NA 2WE5A 2BUFA 2R98A 2HMFA 3C20A 3S6HA 4JZ8A 3D2MA 3D40A 3D41A 4JZ7A 1GSJA 1OHAA 4NDRA 4I49A 3KZFA 2J5TA 2W21A 2BTYA 1B7BA 3T7BA 1OHBA 4USJA 3ZZGA 4Q1TA 3AAWA 4NDOA 3U6UA 4F6TB 2IJ9A 2BNEA 2J4JA 3WWNA 1GS5A 2JJ4A 3C1MA 4KZTA 3D2PA 4NDQA 3QVHA 3ZZFA 4AXSA 3QUNA 3EK5A 2OGXA 4NDPB
chains in the Genus database with same CATH superfamily
3S6GA 2J4LA 3ZZHA 3NWYA 2X2WA 3L76A 2BNDA 1E19A 2CDQA 3K4YA 2J4KA 2V5HA 2BMUA 3WWMA 3S6KA 2WE4A 2BNFA 3QUOA 2E9YA 4JZ9A 3LL9A 3AB4A 4NDRB 3LL5A 3AB2A 3QVFA 2R8VA 2J0WA 2AKOA 4OLCA 2RD5A 4A7XA 3L86A 1YBDA 3LKKA 4F6TA 3K4OA 4NDOB 2J5VA 2V4YA 2BRIA 3TVIA 1OH9A 2JJXA 3B8GA 4AB7A 2A1FA 1Z9DA 3K52A 4NDQB 2J0XA 3QURA 3ZZIA 2AP9A 2WXBA 2JI5A 4NDPA 3EK6A 4A7WA 2BRXA 2VA1A 3K56A 2OGXB 3C1NA 2WE5A 2BUFA 2R98A 2HMFA 3C20A 3S6HA 4JZ8A 3D2MA 3D40A 3D41A 4JZ7A 1GSJA 1OHAA 4NDRA 4I49A 3KZFA 2J5TA 2W21A 2BTYA 1B7BA 3T7BA 1OHBA 4USJA 3ZZGA 4Q1TA 3AAWA 4NDOA 3U6UA 4F6TB 2IJ9A 2BNEA 2J4JA 3WWNA 1GS5A 2JJ4A 3C1MA 4KZTA 3D2PA 4NDQA 3QVHA 3ZZFA 4AXSA 3QUNA 3EK5A 2OGXA 4NDPB
chains in the Genus database with same CATH topology
3S6GA 2J4LA 3ZZHA 3NWYA 2X2WA 3L76A 2BNDA 1E19A 2CDQA 3K4YA 2J4KA 2V5HA 2BMUA 3WWMA 3S6KA 2WE4A 2BNFA 3QUOA 2E9YA 4JZ9A 3LL9A 3AB4A 4NDRB 3LL5A 3AB2A 3QVFA 2R8VA 2J0WA 2AKOA 4OLCA 2RD5A 4A7XA 3L86A 1YBDA 3LKKA 4F6TA 3K4OA 4NDOB 2J5VA 2V4YA 2BRIA 3TVIA 1OH9A 2JJXA 3B8GA 4AB7A 2A1FA 1Z9DA 3K52A 4NDQB 2J0XA 3QURA 3ZZIA 2AP9A 2WXBA 2JI5A 4NDPA 3EK6A 4A7WA 2BRXA 2VA1A 3K56A 2OGXB 3C1NA 2WE5A 2BUFA 2R98A 2HMFA 3C20A 3S6HA 4JZ8A 3D2MA 3D40A 3D41A 4JZ7A 1GSJA 1OHAA 4NDRA 4I49A 3KZFA 2J5TA 2W21A 2BTYA 1B7BA 3T7BA 1OHBA 4USJA 3ZZGA 4Q1TA 3AAWA 4NDOA 3U6UA 4F6TB 2IJ9A 2BNEA 2J4JA 3WWNA 1GS5A 2JJ4A 3C1MA 4KZTA 3D2PA 4NDQA 3QVHA 3ZZFA 4AXSA 3QUNA 3EK5A 2OGXA 4NDPB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S6G A;  2J4L A;  3ZZH A;  3NWY A;  2X2W A;  3L76 A;  2BND A;  1E19 A;  2CDQ A;  3K4Y A;  2J4K A;  2V5H A;  2BMU A;  3WWM A;  3S6K A;  2WE4 A;  2BNF A;  3QUO A;  2E9Y A;  4JZ9 A;  3LL9 A;  3AB4 A;  4NDR B;  3LL5 A;  3AB2 A;  3QVF A;  2R8V A;  2J0W A;  2AKO A;  4OLC A;  2RD5 A;  4A7X A;  3L86 A;  1YBD A;  3LKK A;  4F6T A;  3K4O A;  4NDO B;  2J5V A;  2V4Y A;  2BRI A;  3TVI A;  1OH9 A;  2JJX A;  3B8G A;  4AB7 A;  2A1F A;  1Z9D A;  3K52 A;  4NDQ B;  2J0X A;  3QUR A;  3ZZI A;  2AP9 A;  2WXB A;  2JI5 A;  4NDP A;  3EK6 A;  4A7W A;  2BRX A;  2VA1 A;  3K56 A;  2OGX B;  3C1N A;  2WE5 A;  2BUF A;  2R98 A;  2HMF A;  3C20 A;  3S6H A;  4JZ8 A;  3D2M A;  3D40 A;  3D41 A;  4JZ7 A;  1GSJ A;  1OHA A;  4NDR A;  4I49 A;  3KZF A;  2J5T A;  2W21 A;  2BTY A;  1B7B A;  3T7B A;  1OHB A;  4USJ A;  3ZZG A;  4Q1T A;  3AAW A;  4NDO A;  3U6U A;  4F6T B;  2IJ9 A;  2BNE A;  2J4J A;  3WWN A;  1GS5 A;  2JJ4 A;  3C1M A;  4KZT A;  3D2P A;  4NDQ A;  3QVH A;  3ZZF A;  4AXS A;  3QUN A;  3EK5 A;  2OGX A;  4NDP B; 
#chains in the Genus database with same CATH topology
 3S6G A;  2J4L A;  3ZZH A;  3NWY A;  2X2W A;  3L76 A;  2BND A;  1E19 A;  2CDQ A;  3K4Y A;  2J4K A;  2V5H A;  2BMU A;  3WWM A;  3S6K A;  2WE4 A;  2BNF A;  3QUO A;  2E9Y A;  4JZ9 A;  3LL9 A;  3AB4 A;  4NDR B;  3LL5 A;  3AB2 A;  3QVF A;  2R8V A;  2J0W A;  2AKO A;  4OLC A;  2RD5 A;  4A7X A;  3L86 A;  1YBD A;  3LKK A;  4F6T A;  3K4O A;  4NDO B;  2J5V A;  2V4Y A;  2BRI A;  3TVI A;  1OH9 A;  2JJX A;  3B8G A;  4AB7 A;  2A1F A;  1Z9D A;  3K52 A;  4NDQ B;  2J0X A;  3QUR A;  3ZZI A;  2AP9 A;  2WXB A;  2JI5 A;  4NDP A;  3EK6 A;  4A7W A;  2BRX A;  2VA1 A;  3K56 A;  2OGX B;  3C1N A;  2WE5 A;  2BUF A;  2R98 A;  2HMF A;  3C20 A;  3S6H A;  4JZ8 A;  3D2M A;  3D40 A;  3D41 A;  4JZ7 A;  1GSJ A;  1OHA A;  4NDR A;  4I49 A;  3KZF A;  2J5T A;  2W21 A;  2BTY A;  1B7B A;  3T7B A;  1OHB A;  4USJ A;  3ZZG A;  4Q1T A;  3AAW A;  4NDO A;  3U6U A;  4F6T B;  2IJ9 A;  2BNE A;  2J4J A;  3WWN A;  1GS5 A;  2JJ4 A;  3C1M A;  4KZT A;  3D2P A;  4NDQ A;  3QVH A;  3ZZF A;  4AXS A;  3QUN A;  3EK5 A;  2OGX A;  4NDP B; 
#chains in the Genus database with same CATH homology
 3S6G A;  2J4L A;  3ZZH A;  3NWY A;  2X2W A;  3L76 A;  2BND A;  1E19 A;  2CDQ A;  3K4Y A;  2J4K A;  2V5H A;  2BMU A;  3WWM A;  3S6K A;  2WE4 A;  2BNF A;  3QUO A;  2E9Y A;  4JZ9 A;  3LL9 A;  3AB4 A;  4NDR B;  3LL5 A;  3AB2 A;  3QVF A;  2R8V A;  2J0W A;  2AKO A;  4OLC A;  2RD5 A;  4A7X A;  3L86 A;  1YBD A;  3LKK A;  4F6T A;  3K4O A;  4NDO B;  2J5V A;  2V4Y A;  2BRI A;  3TVI A;  1OH9 A;  2JJX A;  3B8G A;  4AB7 A;  2A1F A;  1Z9D A;  3K52 A;  4NDQ B;  2J0X A;  3QUR A;  3ZZI A;  2AP9 A;  2WXB A;  2JI5 A;  4NDP A;  3EK6 A;  4A7W A;  2BRX A;  2VA1 A;  3K56 A;  2OGX B;  3C1N A;  2WE5 A;  2BUF A;  2R98 A;  2HMF A;  3C20 A;  3S6H A;  4JZ8 A;  3D2M A;  3D40 A;  3D41 A;  4JZ7 A;  1GSJ A;  1OHA A;  4NDR A;  4I49 A;  3KZF A;  2J5T A;  2W21 A;  2BTY A;  1B7B A;  3T7B A;  1OHB A;  4USJ A;  3ZZG A;  4Q1T A;  3AAW A;  4NDO A;  3U6U A;  4F6T B;  2IJ9 A;  2BNE A;  2J4J A;  3WWN A;  1GS5 A;  2JJ4 A;  3C1M A;  4KZT A;  3D2P A;  4NDQ A;  3QVH A;  3ZZF A;  4AXS A;  3QUN A;  3EK5 A;  2OGX A;  4NDP B; 
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similar chains in the Genus database (?% sequence similarity)
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