4USJA

N-acetylglutamate kinase from arabidopsis thaliana in complex with pii from chlamydomonas reinhardtii
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
281
structure length
281
Chain Sequence
DYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE, CHLOROPLASTIC
molecule tags Transferase
source organism Arabidopsis thaliana
total genus 95
structure length 281
sequence length 281
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2014-07-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 4usjA00
1B7BA 4F6TA 4JZ8A 2J4LA 4NDQA 4NDRB 2V5HA 2J0XA 2WE4A 3D40A 4Q1TA 3D2MA 3KZFA 3D41A 3EK6A 2RD5A 4JZ9A 3ZZHA 2J5VA 4NDOB 3L76A 3TVIA 3WWMA 1GSJA 3QURA 1GS5A 4A7WA 3LKKA 3S6HA 2BRIA 4NDPA 1E19A 2AKOA 4NDRA 3K4OA 4A7XA 2OGXB 3WWNA 3L86A 3K52A 2AP9A 2BRXA 3QUNA 2J0WA 2BTYA 3ZZIA 2J5TA 2WXBA 4NDOA 2X2WA 2E9YA 3K56A 3QVHA 3QVFA 2JJ4A 3S6GA 2IJ9A 2BNDA 2BNFA 3U6UA 2J4JA 3QUOA 1OH9A 3AB2A 2V4YA 3AB4A 2BNEA 2OGXA 3LL5A 1YBDA 1Z9DA 2A1FA 4USJA 4F6TB 2JI5A 3C20A 3D2PA 1OHBA 2VA1A 4NDQB 4I49A 3S6KA 4AXSA 3C1NA 3K4YA 2R98A 3EK5A 1OHAA 4AB7A 3ZZGA 3AAWA 2JJXA 3B8GA 2BUFA 2R8VA 2W21A 4OLCA 3LL9A 3ZZFA 2WE5A 3T7BA 2BMUA 2HMFA 4KZTA 2CDQA 3C1MA 3NWYA 4NDPB 2J4KA 4JZ7A
chains in the Genus database with same CATH superfamily
1B7BA 4F6TA 4JZ8A 2J4LA 4NDQA 4NDRB 2V5HA 2J0XA 2WE4A 3D40A 4Q1TA 3D2MA 3KZFA 3D41A 3EK6A 2RD5A 4JZ9A 3ZZHA 2J5VA 4NDOB 3L76A 3TVIA 3WWMA 1GSJA 3QURA 1GS5A 4A7WA 3LKKA 3S6HA 2BRIA 4NDPA 1E19A 2AKOA 4NDRA 3K4OA 4A7XA 2OGXB 3WWNA 3L86A 3K52A 2AP9A 2BRXA 3QUNA 2J0WA 2BTYA 3ZZIA 2J5TA 2WXBA 4NDOA 2X2WA 2E9YA 3K56A 3QVHA 3QVFA 2JJ4A 3S6GA 2IJ9A 2BNDA 2BNFA 3U6UA 2J4JA 3QUOA 1OH9A 3AB2A 2V4YA 3AB4A 2BNEA 2OGXA 3LL5A 1YBDA 1Z9DA 2A1FA 4USJA 4F6TB 2JI5A 3C20A 3D2PA 1OHBA 2VA1A 4NDQB 4I49A 3S6KA 4AXSA 3C1NA 3K4YA 2R98A 3EK5A 1OHAA 4AB7A 3ZZGA 3AAWA 2JJXA 3B8GA 2BUFA 2R8VA 2W21A 4OLCA 3LL9A 3ZZFA 2WE5A 3T7BA 2BMUA 2HMFA 4KZTA 2CDQA 3C1MA 3NWYA 4NDPB 2J4KA 4JZ7A
chains in the Genus database with same CATH topology
1B7BA 4F6TA 4JZ8A 2J4LA 4NDQA 4NDRB 2V5HA 2J0XA 2WE4A 3D40A 4Q1TA 3D2MA 3KZFA 3D41A 3EK6A 2RD5A 4JZ9A 3ZZHA 2J5VA 4NDOB 3L76A 3TVIA 3WWMA 1GSJA 3QURA 1GS5A 4A7WA 3LKKA 3S6HA 2BRIA 4NDPA 1E19A 2AKOA 4NDRA 3K4OA 4A7XA 2OGXB 3WWNA 3L86A 3K52A 2AP9A 2BRXA 3QUNA 2J0WA 2BTYA 3ZZIA 2J5TA 2WXBA 4NDOA 2X2WA 2E9YA 3K56A 3QVHA 3QVFA 2JJ4A 3S6GA 2IJ9A 2BNDA 2BNFA 3U6UA 2J4JA 3QUOA 1OH9A 3AB2A 2V4YA 3AB4A 2BNEA 2OGXA 3LL5A 1YBDA 1Z9DA 2A1FA 4USJA 4F6TB 2JI5A 3C20A 3D2PA 1OHBA 2VA1A 4NDQB 4I49A 3S6KA 4AXSA 3C1NA 3K4YA 2R98A 3EK5A 1OHAA 4AB7A 3ZZGA 3AAWA 2JJXA 3B8GA 2BUFA 2R8VA 2W21A 4OLCA 3LL9A 3ZZFA 2WE5A 3T7BA 2BMUA 2HMFA 4KZTA 2CDQA 3C1MA 3NWYA 4NDPB 2J4KA 4JZ7A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1B7B A;  4F6T A;  4JZ8 A;  2J4L A;  4NDQ A;  4NDR B;  2V5H A;  2J0X A;  2WE4 A;  3D40 A;  4Q1T A;  3D2M A;  3KZF A;  3D41 A;  3EK6 A;  2RD5 A;  4JZ9 A;  3ZZH A;  2J5V A;  4NDO B;  3L76 A;  3TVI A;  3WWM A;  1GSJ A;  3QUR A;  1GS5 A;  4A7W A;  3LKK A;  3S6H A;  2BRI A;  4NDP A;  1E19 A;  2AKO A;  4NDR A;  3K4O A;  4A7X A;  2OGX B;  3WWN A;  3L86 A;  3K52 A;  2AP9 A;  2BRX A;  3QUN A;  2J0W A;  2BTY A;  3ZZI A;  2J5T A;  2WXB A;  4NDO A;  2X2W A;  2E9Y A;  3K56 A;  3QVH A;  3QVF A;  2JJ4 A;  3S6G A;  2IJ9 A;  2BND A;  2BNF A;  3U6U A;  2J4J A;  3QUO A;  1OH9 A;  3AB2 A;  2V4Y A;  3AB4 A;  2BNE A;  2OGX A;  3LL5 A;  1YBD A;  1Z9D A;  2A1F A;  4USJ A;  4F6T B;  2JI5 A;  3C20 A;  3D2P A;  1OHB A;  2VA1 A;  4NDQ B;  4I49 A;  3S6K A;  4AXS A;  3C1N A;  3K4Y A;  2R98 A;  3EK5 A;  1OHA A;  4AB7 A;  3ZZG A;  3AAW A;  2JJX A;  3B8G A;  2BUF A;  2R8V A;  2W21 A;  4OLC A;  3LL9 A;  3ZZF A;  2WE5 A;  3T7B A;  2BMU A;  2HMF A;  4KZT A;  2CDQ A;  3C1M A;  3NWY A;  4NDP B;  2J4K A;  4JZ7 A; 
#chains in the Genus database with same CATH topology
 1B7B A;  4F6T A;  4JZ8 A;  2J4L A;  4NDQ A;  4NDR B;  2V5H A;  2J0X A;  2WE4 A;  3D40 A;  4Q1T A;  3D2M A;  3KZF A;  3D41 A;  3EK6 A;  2RD5 A;  4JZ9 A;  3ZZH A;  2J5V A;  4NDO B;  3L76 A;  3TVI A;  3WWM A;  1GSJ A;  3QUR A;  1GS5 A;  4A7W A;  3LKK A;  3S6H A;  2BRI A;  4NDP A;  1E19 A;  2AKO A;  4NDR A;  3K4O A;  4A7X A;  2OGX B;  3WWN A;  3L86 A;  3K52 A;  2AP9 A;  2BRX A;  3QUN A;  2J0W A;  2BTY A;  3ZZI A;  2J5T A;  2WXB A;  4NDO A;  2X2W A;  2E9Y A;  3K56 A;  3QVH A;  3QVF A;  2JJ4 A;  3S6G A;  2IJ9 A;  2BND A;  2BNF A;  3U6U A;  2J4J A;  3QUO A;  1OH9 A;  3AB2 A;  2V4Y A;  3AB4 A;  2BNE A;  2OGX A;  3LL5 A;  1YBD A;  1Z9D A;  2A1F A;  4USJ A;  4F6T B;  2JI5 A;  3C20 A;  3D2P A;  1OHB A;  2VA1 A;  4NDQ B;  4I49 A;  3S6K A;  4AXS A;  3C1N A;  3K4Y A;  2R98 A;  3EK5 A;  1OHA A;  4AB7 A;  3ZZG A;  3AAW A;  2JJX A;  3B8G A;  2BUF A;  2R8V A;  2W21 A;  4OLC A;  3LL9 A;  3ZZF A;  2WE5 A;  3T7B A;  2BMU A;  2HMF A;  4KZT A;  2CDQ A;  3C1M A;  3NWY A;  4NDP B;  2J4K A;  4JZ7 A; 
#chains in the Genus database with same CATH homology
 1B7B A;  4F6T A;  4JZ8 A;  2J4L A;  4NDQ A;  4NDR B;  2V5H A;  2J0X A;  2WE4 A;  3D40 A;  4Q1T A;  3D2M A;  3KZF A;  3D41 A;  3EK6 A;  2RD5 A;  4JZ9 A;  3ZZH A;  2J5V A;  4NDO B;  3L76 A;  3TVI A;  3WWM A;  1GSJ A;  3QUR A;  1GS5 A;  4A7W A;  3LKK A;  3S6H A;  2BRI A;  4NDP A;  1E19 A;  2AKO A;  4NDR A;  3K4O A;  4A7X A;  2OGX B;  3WWN A;  3L86 A;  3K52 A;  2AP9 A;  2BRX A;  3QUN A;  2J0W A;  2BTY A;  3ZZI A;  2J5T A;  2WXB A;  4NDO A;  2X2W A;  2E9Y A;  3K56 A;  3QVH A;  3QVF A;  2JJ4 A;  3S6G A;  2IJ9 A;  2BND A;  2BNF A;  3U6U A;  2J4J A;  3QUO A;  1OH9 A;  3AB2 A;  2V4Y A;  3AB4 A;  2BNE A;  2OGX A;  3LL5 A;  1YBD A;  1Z9D A;  2A1F A;  4USJ A;  4F6T B;  2JI5 A;  3C20 A;  3D2P A;  1OHB A;  2VA1 A;  4NDQ B;  4I49 A;  3S6K A;  4AXS A;  3C1N A;  3K4Y A;  2R98 A;  3EK5 A;  1OHA A;  4AB7 A;  3ZZG A;  3AAW A;  2JJX A;  3B8G A;  2BUF A;  2R8V A;  2W21 A;  4OLC A;  3LL9 A;  3ZZF A;  2WE5 A;  3T7B A;  2BMU A;  2HMF A;  4KZT A;  2CDQ A;  3C1M A;  3NWY A;  4NDP B;  2J4K A;  4JZ7 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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