4USJA

N-acetylglutamate kinase from arabidopsis thaliana in complex with pii from chlamydomonas reinhardtii
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
281
structure length
281
Chain Sequence
DYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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molecule tags Transferase
source organism Arabidopsis thaliana
publication title A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE, CHLOROPLASTIC
total genus 95
structure length 281
sequence length 281
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2014-07-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 4usjA00
4NDPA 2JI5A 2WXBA 2BMUA 2V5HA 2AKOA 2J5VA 2J4LA 2R8VA 4NDRA 2WE4A 1OH9A 1YBDA 4NDOB 3LL5A 3D2MA 3LKKA 1OHBA 4JZ9A 3K52A 3TVIA 2J4JA 2BNDA 2J0XA 3WWNA 2HMFA 3S6GA 4NDOA 3D41A 3C1MA 4USJA 2A1FA 2BUFA 2R98A 2CDQA 3EK6A 3ZZFA 3S6HA 3NWYA 2E9YA 3K4YA 2X2WA 3WWMA 2J5TA 3L76A 2JJ4A 3QVFA 1E19A 3S6KA 4Q1TA 2BNFA 4JZ7A 3AB4A 2BNEA 2BTYA 2J0WA 2BRIA 1B7BA 3LL9A 3AAWA 2OGXB 4A7XA 3ZZIA 4AB7A 4AXSA 3B8GA 4A7WA 3QURA 3QUNA 3ZZHA 3D2PA 2V4YA 1OHAA 3K4OA 3AB2A 3L86A 3C20A 3ZZGA 2OGXA 2AP9A 4I49A 2JJXA 2VA1A 4KZTA 2BRXA 3C1NA 4OLCA 4NDQB 3U6UA 3QVHA 3QUOA 2W21A 1GS5A 4F6TB 3EK5A 1GSJA 3T7BA 3D40A 2RD5A 4NDQA 4NDPB 2J4KA 3KZFA 3K56A 4JZ8A 4F6TA 2WE5A 2IJ9A 4NDRB 1Z9DA
chains in the Genus database with same CATH superfamily
4NDPA 2JI5A 2WXBA 2BMUA 2V5HA 2AKOA 2J5VA 2J4LA 2R8VA 4NDRA 2WE4A 1OH9A 1YBDA 4NDOB 3LL5A 3D2MA 3LKKA 1OHBA 4JZ9A 3K52A 3TVIA 2J4JA 2BNDA 2J0XA 3WWNA 2HMFA 3S6GA 4NDOA 3D41A 3C1MA 4USJA 2A1FA 2BUFA 2R98A 2CDQA 3EK6A 3ZZFA 3S6HA 3NWYA 2E9YA 3K4YA 2X2WA 3WWMA 2J5TA 3L76A 2JJ4A 3QVFA 1E19A 3S6KA 4Q1TA 2BNFA 4JZ7A 3AB4A 2BNEA 2BTYA 2J0WA 2BRIA 1B7BA 3LL9A 3AAWA 2OGXB 4A7XA 3ZZIA 4AB7A 4AXSA 3B8GA 4A7WA 3QURA 3QUNA 3ZZHA 3D2PA 2V4YA 1OHAA 3K4OA 3AB2A 3L86A 3C20A 3ZZGA 2OGXA 2AP9A 4I49A 2JJXA 2VA1A 4KZTA 2BRXA 3C1NA 4OLCA 4NDQB 3U6UA 3QVHA 3QUOA 2W21A 1GS5A 4F6TB 3EK5A 1GSJA 3T7BA 3D40A 2RD5A 4NDQA 4NDPB 2J4KA 3KZFA 3K56A 4JZ8A 4F6TA 2WE5A 2IJ9A 4NDRB 1Z9DA
chains in the Genus database with same CATH topology
4NDPA 2JI5A 2WXBA 2BMUA 2V5HA 2AKOA 2J5VA 2J4LA 2R8VA 4NDRA 2WE4A 1OH9A 1YBDA 4NDOB 3LL5A 3D2MA 3LKKA 1OHBA 4JZ9A 3K52A 3TVIA 2J4JA 2BNDA 2J0XA 3WWNA 2HMFA 3S6GA 4NDOA 3D41A 3C1MA 4USJA 2A1FA 2BUFA 2R98A 2CDQA 3EK6A 3ZZFA 3S6HA 3NWYA 2E9YA 3K4YA 2X2WA 3WWMA 2J5TA 3L76A 2JJ4A 3QVFA 1E19A 3S6KA 4Q1TA 2BNFA 4JZ7A 3AB4A 2BNEA 2BTYA 2J0WA 2BRIA 1B7BA 3LL9A 3AAWA 2OGXB 4A7XA 3ZZIA 4AB7A 4AXSA 3B8GA 4A7WA 3QURA 3QUNA 3ZZHA 3D2PA 2V4YA 1OHAA 3K4OA 3AB2A 3L86A 3C20A 3ZZGA 2OGXA 2AP9A 4I49A 2JJXA 2VA1A 4KZTA 2BRXA 3C1NA 4OLCA 4NDQB 3U6UA 3QVHA 3QUOA 2W21A 1GS5A 4F6TB 3EK5A 1GSJA 3T7BA 3D40A 2RD5A 4NDQA 4NDPB 2J4KA 3KZFA 3K56A 4JZ8A 4F6TA 2WE5A 2IJ9A 4NDRB 1Z9DA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 4NDP A;  2JI5 A;  2WXB A;  2BMU A;  2V5H A;  2AKO A;  2J5V A;  2J4L A;  2R8V A;  4NDR A;  2WE4 A;  1OH9 A;  1YBD A;  4NDO B;  3LL5 A;  3D2M A;  3LKK A;  1OHB A;  4JZ9 A;  3K52 A;  3TVI A;  2J4J A;  2BND A;  2J0X A;  3WWN A;  2HMF A;  3S6G A;  4NDO A;  3D41 A;  3C1M A;  4USJ A;  2A1F A;  2BUF A;  2R98 A;  2CDQ A;  3EK6 A;  3ZZF A;  3S6H A;  3NWY A;  2E9Y A;  3K4Y A;  2X2W A;  3WWM A;  2J5T A;  3L76 A;  2JJ4 A;  3QVF A;  1E19 A;  3S6K A;  4Q1T A;  2BNF A;  4JZ7 A;  3AB4 A;  2BNE A;  2BTY A;  2J0W A;  2BRI A;  1B7B A;  3LL9 A;  3AAW A;  2OGX B;  4A7X A;  3ZZI A;  4AB7 A;  4AXS A;  3B8G A;  4A7W A;  3QUR A;  3QUN A;  3ZZH A;  3D2P A;  2V4Y A;  1OHA A;  3K4O A;  3AB2 A;  3L86 A;  3C20 A;  3ZZG A;  2OGX A;  2AP9 A;  4I49 A;  2JJX A;  2VA1 A;  4KZT A;  2BRX A;  3C1N A;  4OLC A;  4NDQ B;  3U6U A;  3QVH A;  3QUO A;  2W21 A;  1GS5 A;  4F6T B;  3EK5 A;  1GSJ A;  3T7B A;  3D40 A;  2RD5 A;  4NDQ A;  4NDP B;  2J4K A;  3KZF A;  3K56 A;  4JZ8 A;  4F6T A;  2WE5 A;  2IJ9 A;  4NDR B;  1Z9D A; 
#chains in the Genus database with same CATH topology
 4NDP A;  2JI5 A;  2WXB A;  2BMU A;  2V5H A;  2AKO A;  2J5V A;  2J4L A;  2R8V A;  4NDR A;  2WE4 A;  1OH9 A;  1YBD A;  4NDO B;  3LL5 A;  3D2M A;  3LKK A;  1OHB A;  4JZ9 A;  3K52 A;  3TVI A;  2J4J A;  2BND A;  2J0X A;  3WWN A;  2HMF A;  3S6G A;  4NDO A;  3D41 A;  3C1M A;  4USJ A;  2A1F A;  2BUF A;  2R98 A;  2CDQ A;  3EK6 A;  3ZZF A;  3S6H A;  3NWY A;  2E9Y A;  3K4Y A;  2X2W A;  3WWM A;  2J5T A;  3L76 A;  2JJ4 A;  3QVF A;  1E19 A;  3S6K A;  4Q1T A;  2BNF A;  4JZ7 A;  3AB4 A;  2BNE A;  2BTY A;  2J0W A;  2BRI A;  1B7B A;  3LL9 A;  3AAW A;  2OGX B;  4A7X A;  3ZZI A;  4AB7 A;  4AXS A;  3B8G A;  4A7W A;  3QUR A;  3QUN A;  3ZZH A;  3D2P A;  2V4Y A;  1OHA A;  3K4O A;  3AB2 A;  3L86 A;  3C20 A;  3ZZG A;  2OGX A;  2AP9 A;  4I49 A;  2JJX A;  2VA1 A;  4KZT A;  2BRX A;  3C1N A;  4OLC A;  4NDQ B;  3U6U A;  3QVH A;  3QUO A;  2W21 A;  1GS5 A;  4F6T B;  3EK5 A;  1GSJ A;  3T7B A;  3D40 A;  2RD5 A;  4NDQ A;  4NDP B;  2J4K A;  3KZF A;  3K56 A;  4JZ8 A;  4F6T A;  2WE5 A;  2IJ9 A;  4NDR B;  1Z9D A; 
#chains in the Genus database with same CATH homology
 4NDP A;  2JI5 A;  2WXB A;  2BMU A;  2V5H A;  2AKO A;  2J5V A;  2J4L A;  2R8V A;  4NDR A;  2WE4 A;  1OH9 A;  1YBD A;  4NDO B;  3LL5 A;  3D2M A;  3LKK A;  1OHB A;  4JZ9 A;  3K52 A;  3TVI A;  2J4J A;  2BND A;  2J0X A;  3WWN A;  2HMF A;  3S6G A;  4NDO A;  3D41 A;  3C1M A;  4USJ A;  2A1F A;  2BUF A;  2R98 A;  2CDQ A;  3EK6 A;  3ZZF A;  3S6H A;  3NWY A;  2E9Y A;  3K4Y A;  2X2W A;  3WWM A;  2J5T A;  3L76 A;  2JJ4 A;  3QVF A;  1E19 A;  3S6K A;  4Q1T A;  2BNF A;  4JZ7 A;  3AB4 A;  2BNE A;  2BTY A;  2J0W A;  2BRI A;  1B7B A;  3LL9 A;  3AAW A;  2OGX B;  4A7X A;  3ZZI A;  4AB7 A;  4AXS A;  3B8G A;  4A7W A;  3QUR A;  3QUN A;  3ZZH A;  3D2P A;  2V4Y A;  1OHA A;  3K4O A;  3AB2 A;  3L86 A;  3C20 A;  3ZZG A;  2OGX A;  2AP9 A;  4I49 A;  2JJX A;  2VA1 A;  4KZT A;  2BRX A;  3C1N A;  4OLC A;  4NDQ B;  3U6U A;  3QVH A;  3QUO A;  2W21 A;  1GS5 A;  4F6T B;  3EK5 A;  1GSJ A;  3T7B A;  3D40 A;  2RD5 A;  4NDQ A;  4NDP B;  2J4K A;  3KZF A;  3K56 A;  4JZ8 A;  4F6T A;  2WE5 A;  2IJ9 A;  4NDR B;  1Z9D A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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