1GSJA

Selenomethionine substituted n-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetyl-l-glutamate and its substrate analog amppnp
Total Genus 78
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
78
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
total genus 78
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2002-01-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gsjA00
2BNEA 2IJ9A 3ZZHA 3LKKA 2J0XA 2J4KA 2V5HA 3QVHA 3EK6A 3K4YA 4USJA 2WE5A 2JI5A 3S6HA 1YBDA 3WWNA 2X2WA 3U6UA 3LL5A 3WWMA 3AB2A 2OGXA 2VA1A 3D2PA 4AXSA 3NWYA 2JJ4A 2R8VA 4NDRB 3C20A 2BUFA 4JZ9A 2J4JA 2WE4A 2RD5A 2JJXA 1OHBA 4NDQB 2R98A 3AAWA 2J5VA 4NDRA 4NDPA 4A7WA 4NDOA 1Z9DA 3QURA 4NDQA 3ZZFA 4Q1TA 2J4LA 3EK5A 3K52A 2V4YA 1GSJA 4OLCA 2AP9A 2WXBA 4KZTA 3TVIA 3D2MA 3S6GA 3ZZIA 2BTYA 2BMUA 2A1FA 3QUNA 1OHAA 4JZ8A 3D41A 3L86A 4JZ7A 3ZZGA 2CDQA 2HMFA 4F6TA 2J0WA 3C1MA 3C1NA 1OH9A 1E19A 4NDOB 3D40A 2W21A 3K56A 2BRXA 3KZFA 3B8GA 4AB7A 3K4OA 2BNDA 4NDPB 3T7BA 2E9YA 3AB4A 2J5TA 3QVFA 4A7XA 2OGXB 2AKOA 3LL9A 2BNFA 2BRIA 3S6KA 1GS5A 1B7BA 4I49A 3QUOA 3L76A 4F6TB
chains in the Genus database with same CATH superfamily
2BNEA 2IJ9A 3ZZHA 3LKKA 2J0XA 2J4KA 2V5HA 3QVHA 3EK6A 3K4YA 4USJA 2WE5A 2JI5A 3S6HA 1YBDA 3WWNA 2X2WA 3U6UA 3LL5A 3WWMA 3AB2A 2OGXA 2VA1A 3D2PA 4AXSA 3NWYA 2JJ4A 2R8VA 4NDRB 3C20A 2BUFA 4JZ9A 2J4JA 2WE4A 2RD5A 2JJXA 1OHBA 4NDQB 2R98A 3AAWA 2J5VA 4NDRA 4NDPA 4A7WA 4NDOA 1Z9DA 3QURA 4NDQA 3ZZFA 4Q1TA 2J4LA 3EK5A 3K52A 2V4YA 1GSJA 4OLCA 2AP9A 2WXBA 4KZTA 3TVIA 3D2MA 3S6GA 3ZZIA 2BTYA 2BMUA 2A1FA 3QUNA 1OHAA 4JZ8A 3D41A 3L86A 4JZ7A 3ZZGA 2CDQA 2HMFA 4F6TA 2J0WA 3C1MA 3C1NA 1OH9A 1E19A 4NDOB 3D40A 2W21A 3K56A 2BRXA 3KZFA 3B8GA 4AB7A 3K4OA 2BNDA 4NDPB 3T7BA 2E9YA 3AB4A 2J5TA 3QVFA 4A7XA 2OGXB 2AKOA 3LL9A 2BNFA 2BRIA 3S6KA 1GS5A 1B7BA 4I49A 3QUOA 3L76A 4F6TB
chains in the Genus database with same CATH topology
2BNEA 2IJ9A 3ZZHA 3LKKA 2J0XA 2J4KA 2V5HA 3QVHA 3EK6A 3K4YA 4USJA 2WE5A 2JI5A 3S6HA 1YBDA 3WWNA 2X2WA 3U6UA 3LL5A 3WWMA 3AB2A 2OGXA 2VA1A 3D2PA 4AXSA 3NWYA 2JJ4A 2R8VA 4NDRB 3C20A 2BUFA 4JZ9A 2J4JA 2WE4A 2RD5A 2JJXA 1OHBA 4NDQB 2R98A 3AAWA 2J5VA 4NDRA 4NDPA 4A7WA 4NDOA 1Z9DA 3QURA 4NDQA 3ZZFA 4Q1TA 2J4LA 3EK5A 3K52A 2V4YA 1GSJA 4OLCA 2AP9A 2WXBA 4KZTA 3TVIA 3D2MA 3S6GA 3ZZIA 2BTYA 2BMUA 2A1FA 3QUNA 1OHAA 4JZ8A 3D41A 3L86A 4JZ7A 3ZZGA 2CDQA 2HMFA 4F6TA 2J0WA 3C1MA 3C1NA 1OH9A 1E19A 4NDOB 3D40A 2W21A 3K56A 2BRXA 3KZFA 3B8GA 4AB7A 3K4OA 2BNDA 4NDPB 3T7BA 2E9YA 3AB4A 2J5TA 3QVFA 4A7XA 2OGXB 2AKOA 3LL9A 2BNFA 2BRIA 3S6KA 1GS5A 1B7BA 4I49A 3QUOA 3L76A 4F6TB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BNE A;  2IJ9 A;  3ZZH A;  3LKK A;  2J0X A;  2J4K A;  2V5H A;  3QVH A;  3EK6 A;  3K4Y A;  4USJ A;  2WE5 A;  2JI5 A;  3S6H A;  1YBD A;  3WWN A;  2X2W A;  3U6U A;  3LL5 A;  3WWM A;  3AB2 A;  2OGX A;  2VA1 A;  3D2P A;  4AXS A;  3NWY A;  2JJ4 A;  2R8V A;  4NDR B;  3C20 A;  2BUF A;  4JZ9 A;  2J4J A;  2WE4 A;  2RD5 A;  2JJX A;  1OHB A;  4NDQ B;  2R98 A;  3AAW A;  2J5V A;  4NDR A;  4NDP A;  4A7W A;  4NDO A;  1Z9D A;  3QUR A;  4NDQ A;  3ZZF A;  4Q1T A;  2J4L A;  3EK5 A;  3K52 A;  2V4Y A;  1GSJ A;  4OLC A;  2AP9 A;  2WXB A;  4KZT A;  3TVI A;  3D2M A;  3S6G A;  3ZZI A;  2BTY A;  2BMU A;  2A1F A;  3QUN A;  1OHA A;  4JZ8 A;  3D41 A;  3L86 A;  4JZ7 A;  3ZZG A;  2CDQ A;  2HMF A;  4F6T A;  2J0W A;  3C1M A;  3C1N A;  1OH9 A;  1E19 A;  4NDO B;  3D40 A;  2W21 A;  3K56 A;  2BRX A;  3KZF A;  3B8G A;  4AB7 A;  3K4O A;  2BND A;  4NDP B;  3T7B A;  2E9Y A;  3AB4 A;  2J5T A;  3QVF A;  4A7X A;  2OGX B;  2AKO A;  3LL9 A;  2BNF A;  2BRI A;  3S6K A;  1GS5 A;  1B7B A;  4I49 A;  3QUO A;  3L76 A;  4F6T B; 
#chains in the Genus database with same CATH topology
 2BNE A;  2IJ9 A;  3ZZH A;  3LKK A;  2J0X A;  2J4K A;  2V5H A;  3QVH A;  3EK6 A;  3K4Y A;  4USJ A;  2WE5 A;  2JI5 A;  3S6H A;  1YBD A;  3WWN A;  2X2W A;  3U6U A;  3LL5 A;  3WWM A;  3AB2 A;  2OGX A;  2VA1 A;  3D2P A;  4AXS A;  3NWY A;  2JJ4 A;  2R8V A;  4NDR B;  3C20 A;  2BUF A;  4JZ9 A;  2J4J A;  2WE4 A;  2RD5 A;  2JJX A;  1OHB A;  4NDQ B;  2R98 A;  3AAW A;  2J5V A;  4NDR A;  4NDP A;  4A7W A;  4NDO A;  1Z9D A;  3QUR A;  4NDQ A;  3ZZF A;  4Q1T A;  2J4L A;  3EK5 A;  3K52 A;  2V4Y A;  1GSJ A;  4OLC A;  2AP9 A;  2WXB A;  4KZT A;  3TVI A;  3D2M A;  3S6G A;  3ZZI A;  2BTY A;  2BMU A;  2A1F A;  3QUN A;  1OHA A;  4JZ8 A;  3D41 A;  3L86 A;  4JZ7 A;  3ZZG A;  2CDQ A;  2HMF A;  4F6T A;  2J0W A;  3C1M A;  3C1N A;  1OH9 A;  1E19 A;  4NDO B;  3D40 A;  2W21 A;  3K56 A;  2BRX A;  3KZF A;  3B8G A;  4AB7 A;  3K4O A;  2BND A;  4NDP B;  3T7B A;  2E9Y A;  3AB4 A;  2J5T A;  3QVF A;  4A7X A;  2OGX B;  2AKO A;  3LL9 A;  2BNF A;  2BRI A;  3S6K A;  1GS5 A;  1B7B A;  4I49 A;  3QUO A;  3L76 A;  4F6T B; 
#chains in the Genus database with same CATH homology
 2BNE A;  2IJ9 A;  3ZZH A;  3LKK A;  2J0X A;  2J4K A;  2V5H A;  3QVH A;  3EK6 A;  3K4Y A;  4USJ A;  2WE5 A;  2JI5 A;  3S6H A;  1YBD A;  3WWN A;  2X2W A;  3U6U A;  3LL5 A;  3WWM A;  3AB2 A;  2OGX A;  2VA1 A;  3D2P A;  4AXS A;  3NWY A;  2JJ4 A;  2R8V A;  4NDR B;  3C20 A;  2BUF A;  4JZ9 A;  2J4J A;  2WE4 A;  2RD5 A;  2JJX A;  1OHB A;  4NDQ B;  2R98 A;  3AAW A;  2J5V A;  4NDR A;  4NDP A;  4A7W A;  4NDO A;  1Z9D A;  3QUR A;  4NDQ A;  3ZZF A;  4Q1T A;  2J4L A;  3EK5 A;  3K52 A;  2V4Y A;  1GSJ A;  4OLC A;  2AP9 A;  2WXB A;  4KZT A;  3TVI A;  3D2M A;  3S6G A;  3ZZI A;  2BTY A;  2BMU A;  2A1F A;  3QUN A;  1OHA A;  4JZ8 A;  3D41 A;  3L86 A;  4JZ7 A;  3ZZG A;  2CDQ A;  2HMF A;  4F6T A;  2J0W A;  3C1M A;  3C1N A;  1OH9 A;  1E19 A;  4NDO B;  3D40 A;  2W21 A;  3K56 A;  2BRX A;  3KZF A;  3B8G A;  4AB7 A;  3K4O A;  2BND A;  4NDP B;  3T7B A;  2E9Y A;  3AB4 A;  2J5T A;  3QVF A;  4A7X A;  2OGX B;  2AKO A;  3LL9 A;  2BNF A;  2BRI A;  3S6K A;  1GS5 A;  1B7B A;  4I49 A;  3QUO A;  3L76 A;  4F6T B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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