1GSJA

Selenomethionine substituted n-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetyl-l-glutamate and its substrate analog amppnp
Total Genus 78
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
78
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 78
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2002-01-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gsjA00
3ZZIA 2J4LA 2HMFA 4F6TB 3D40A 2BTYA 4NDOA 4A7XA 2V5HA 3WWNA 2OGXB 3U6UA 2BNDA 3S6GA 2AP9A 3EK6A 4NDPB 3NWYA 1GSJA 3WWMA 2A1FA 4AB7A 2J4JA 4A7WA 1B7BA 2BRXA 4I49A 3QUNA 1YBDA 3D41A 3EK5A 2WXBA 3S6HA 2E9YA 2W21A 2WE4A 3K4OA 3K52A 1OH9A 3D2PA 4JZ8A 2R98A 4NDOB 2J0WA 4USJA 3L76A 3QUOA 2V4YA 1OHBA 2R8VA 4Q1TA 3D2MA 3AAWA 2BRIA 1Z9DA 4KZTA 3T7BA 3LKKA 3LL9A 3KZFA 3QURA 3S6KA 4OLCA 3ZZFA 2WE5A 2J0XA 3B8GA 2RD5A 3C1MA 1OHAA 3AB2A 3TVIA 4JZ7A 3K4YA 4F6TA 3C20A 4NDRA 2J5VA 2BUFA 3AB4A 3QVHA 4NDRB 1GS5A 4AXSA 3ZZGA 2AKOA 2X2WA 2IJ9A 2OGXA 2BNFA 2BMUA 2JI5A 1E19A 4NDPA 3ZZHA 3L86A 3LL5A 2BNEA 4NDQA 2CDQA 2J4KA 3C1NA 3QVFA 4NDQB 2JJXA 3K56A 2J5TA 2JJ4A 4JZ9A 2VA1A
chains in the Genus database with same CATH superfamily
3ZZIA 2J4LA 2HMFA 4F6TB 3D40A 2BTYA 4NDOA 4A7XA 2V5HA 3WWNA 2OGXB 3U6UA 2BNDA 3S6GA 2AP9A 3EK6A 4NDPB 3NWYA 1GSJA 3WWMA 2A1FA 4AB7A 2J4JA 4A7WA 1B7BA 2BRXA 4I49A 3QUNA 1YBDA 3D41A 3EK5A 2WXBA 3S6HA 2E9YA 2W21A 2WE4A 3K4OA 3K52A 1OH9A 3D2PA 4JZ8A 2R98A 4NDOB 2J0WA 4USJA 3L76A 3QUOA 2V4YA 1OHBA 2R8VA 4Q1TA 3D2MA 3AAWA 2BRIA 1Z9DA 4KZTA 3T7BA 3LKKA 3LL9A 3KZFA 3QURA 3S6KA 4OLCA 3ZZFA 2WE5A 2J0XA 3B8GA 2RD5A 3C1MA 1OHAA 3AB2A 3TVIA 4JZ7A 3K4YA 4F6TA 3C20A 4NDRA 2J5VA 2BUFA 3AB4A 3QVHA 4NDRB 1GS5A 4AXSA 3ZZGA 2AKOA 2X2WA 2IJ9A 2OGXA 2BNFA 2BMUA 2JI5A 1E19A 4NDPA 3ZZHA 3L86A 3LL5A 2BNEA 4NDQA 2CDQA 2J4KA 3C1NA 3QVFA 4NDQB 2JJXA 3K56A 2J5TA 2JJ4A 4JZ9A 2VA1A
chains in the Genus database with same CATH topology
3ZZIA 2J4LA 2HMFA 4F6TB 3D40A 2BTYA 4NDOA 4A7XA 2V5HA 3WWNA 2OGXB 3U6UA 2BNDA 3S6GA 2AP9A 3EK6A 4NDPB 3NWYA 1GSJA 3WWMA 2A1FA 4AB7A 2J4JA 4A7WA 1B7BA 2BRXA 4I49A 3QUNA 1YBDA 3D41A 3EK5A 2WXBA 3S6HA 2E9YA 2W21A 2WE4A 3K4OA 3K52A 1OH9A 3D2PA 4JZ8A 2R98A 4NDOB 2J0WA 4USJA 3L76A 3QUOA 2V4YA 1OHBA 2R8VA 4Q1TA 3D2MA 3AAWA 2BRIA 1Z9DA 4KZTA 3T7BA 3LKKA 3LL9A 3KZFA 3QURA 3S6KA 4OLCA 3ZZFA 2WE5A 2J0XA 3B8GA 2RD5A 3C1MA 1OHAA 3AB2A 3TVIA 4JZ7A 3K4YA 4F6TA 3C20A 4NDRA 2J5VA 2BUFA 3AB4A 3QVHA 4NDRB 1GS5A 4AXSA 3ZZGA 2AKOA 2X2WA 2IJ9A 2OGXA 2BNFA 2BMUA 2JI5A 1E19A 4NDPA 3ZZHA 3L86A 3LL5A 2BNEA 4NDQA 2CDQA 2J4KA 3C1NA 3QVFA 4NDQB 2JJXA 3K56A 2J5TA 2JJ4A 4JZ9A 2VA1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3ZZI A;  2J4L A;  2HMF A;  4F6T B;  3D40 A;  2BTY A;  4NDO A;  4A7X A;  2V5H A;  3WWN A;  2OGX B;  3U6U A;  2BND A;  3S6G A;  2AP9 A;  3EK6 A;  4NDP B;  3NWY A;  1GSJ A;  3WWM A;  2A1F A;  4AB7 A;  2J4J A;  4A7W A;  1B7B A;  2BRX A;  4I49 A;  3QUN A;  1YBD A;  3D41 A;  3EK5 A;  2WXB A;  3S6H A;  2E9Y A;  2W21 A;  2WE4 A;  3K4O A;  3K52 A;  1OH9 A;  3D2P A;  4JZ8 A;  2R98 A;  4NDO B;  2J0W A;  4USJ A;  3L76 A;  3QUO A;  2V4Y A;  1OHB A;  2R8V A;  4Q1T A;  3D2M A;  3AAW A;  2BRI A;  1Z9D A;  4KZT A;  3T7B A;  3LKK A;  3LL9 A;  3KZF A;  3QUR A;  3S6K A;  4OLC A;  3ZZF A;  2WE5 A;  2J0X A;  3B8G A;  2RD5 A;  3C1M A;  1OHA A;  3AB2 A;  3TVI A;  4JZ7 A;  3K4Y A;  4F6T A;  3C20 A;  4NDR A;  2J5V A;  2BUF A;  3AB4 A;  3QVH A;  4NDR B;  1GS5 A;  4AXS A;  3ZZG A;  2AKO A;  2X2W A;  2IJ9 A;  2OGX A;  2BNF A;  2BMU A;  2JI5 A;  1E19 A;  4NDP A;  3ZZH A;  3L86 A;  3LL5 A;  2BNE A;  4NDQ A;  2CDQ A;  2J4K A;  3C1N A;  3QVF A;  4NDQ B;  2JJX A;  3K56 A;  2J5T A;  2JJ4 A;  4JZ9 A;  2VA1 A; 
#chains in the Genus database with same CATH topology
 3ZZI A;  2J4L A;  2HMF A;  4F6T B;  3D40 A;  2BTY A;  4NDO A;  4A7X A;  2V5H A;  3WWN A;  2OGX B;  3U6U A;  2BND A;  3S6G A;  2AP9 A;  3EK6 A;  4NDP B;  3NWY A;  1GSJ A;  3WWM A;  2A1F A;  4AB7 A;  2J4J A;  4A7W A;  1B7B A;  2BRX A;  4I49 A;  3QUN A;  1YBD A;  3D41 A;  3EK5 A;  2WXB A;  3S6H A;  2E9Y A;  2W21 A;  2WE4 A;  3K4O A;  3K52 A;  1OH9 A;  3D2P A;  4JZ8 A;  2R98 A;  4NDO B;  2J0W A;  4USJ A;  3L76 A;  3QUO A;  2V4Y A;  1OHB A;  2R8V A;  4Q1T A;  3D2M A;  3AAW A;  2BRI A;  1Z9D A;  4KZT A;  3T7B A;  3LKK A;  3LL9 A;  3KZF A;  3QUR A;  3S6K A;  4OLC A;  3ZZF A;  2WE5 A;  2J0X A;  3B8G A;  2RD5 A;  3C1M A;  1OHA A;  3AB2 A;  3TVI A;  4JZ7 A;  3K4Y A;  4F6T A;  3C20 A;  4NDR A;  2J5V A;  2BUF A;  3AB4 A;  3QVH A;  4NDR B;  1GS5 A;  4AXS A;  3ZZG A;  2AKO A;  2X2W A;  2IJ9 A;  2OGX A;  2BNF A;  2BMU A;  2JI5 A;  1E19 A;  4NDP A;  3ZZH A;  3L86 A;  3LL5 A;  2BNE A;  4NDQ A;  2CDQ A;  2J4K A;  3C1N A;  3QVF A;  4NDQ B;  2JJX A;  3K56 A;  2J5T A;  2JJ4 A;  4JZ9 A;  2VA1 A; 
#chains in the Genus database with same CATH homology
 3ZZI A;  2J4L A;  2HMF A;  4F6T B;  3D40 A;  2BTY A;  4NDO A;  4A7X A;  2V5H A;  3WWN A;  2OGX B;  3U6U A;  2BND A;  3S6G A;  2AP9 A;  3EK6 A;  4NDP B;  3NWY A;  1GSJ A;  3WWM A;  2A1F A;  4AB7 A;  2J4J A;  4A7W A;  1B7B A;  2BRX A;  4I49 A;  3QUN A;  1YBD A;  3D41 A;  3EK5 A;  2WXB A;  3S6H A;  2E9Y A;  2W21 A;  2WE4 A;  3K4O A;  3K52 A;  1OH9 A;  3D2P A;  4JZ8 A;  2R98 A;  4NDO B;  2J0W A;  4USJ A;  3L76 A;  3QUO A;  2V4Y A;  1OHB A;  2R8V A;  4Q1T A;  3D2M A;  3AAW A;  2BRI A;  1Z9D A;  4KZT A;  3T7B A;  3LKK A;  3LL9 A;  3KZF A;  3QUR A;  3S6K A;  4OLC A;  3ZZF A;  2WE5 A;  2J0X A;  3B8G A;  2RD5 A;  3C1M A;  1OHA A;  3AB2 A;  3TVI A;  4JZ7 A;  3K4Y A;  4F6T A;  3C20 A;  4NDR A;  2J5V A;  2BUF A;  3AB4 A;  3QVH A;  4NDR B;  1GS5 A;  4AXS A;  3ZZG A;  2AKO A;  2X2W A;  2IJ9 A;  2OGX A;  2BNF A;  2BMU A;  2JI5 A;  1E19 A;  4NDP A;  3ZZH A;  3L86 A;  3LL5 A;  2BNE A;  4NDQ A;  2CDQ A;  2J4K A;  3C1N A;  3QVF A;  4NDQ B;  2JJX A;  3K56 A;  2J5T A;  2JJ4 A;  4JZ9 A;  2VA1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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