1GSJA

Selenomethionine substituted n-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetyl-l-glutamate and its substrate analog amppnp
Total Genus 78
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
78
sequence length
258
structure length
258
Chain Sequence
b'MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 78
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2002-01-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gsjA00
3LL5A 3S6GA 2BTYA 3S6HA 3C1MA 2WE5A 3T7BA 4NDPB 2OGXA 2W21A 2J4LA 2BNFA 3AB2A 4AB7A 2E9YA 3S6KA 3K4OA 3WWMA 2WXBA 3QURA 2JJXA 4F6TB 4AXSA 2AKOA 4NDQB 2R8VA 2J5TA 4OLCA 4NDRA 3AAWA 3QVFA 2OGXB 2JJ4A 3K56A 3QUNA 3D2MA 3D2PA 3C20A 1GS5A 1OH9A 2WE4A 3B8GA 1GSJA 2BNDA 4Q1TA 3KZFA 4JZ7A 2AP9A 2JI5A 4A7XA 4A7WA 3K4YA 4USJA 2BMUA 3ZZIA 3WWNA 4NDRB 2J0WA 3K52A 4JZ8A 1OHAA 2HMFA 3LKKA 3L76A 4NDOA 4I49A 1OHBA 1E19A 3D41A 2J5VA 3ZZFA 2BNEA 2CDQA 3TVIA 2BUFA 2A1FA 2BRIA 3QVHA 2IJ9A 2X2WA 2R98A 3L86A 2VA1A 3AB4A 2RD5A 3C1NA 4NDPA 3D40A 4NDOB 3QUOA 3EK5A 4KZTA 2V5HA 2V4YA 1Z9DA 3ZZGA 2J0XA 1B7BA 4F6TA 3LL9A 3EK6A 2BRXA 2J4KA 4NDQA 3ZZHA 1YBDA 3NWYA 4JZ9A 3U6UA 2J4JA
chains in the Genus database with same CATH superfamily
3LL5A 3S6GA 2BTYA 3S6HA 3C1MA 2WE5A 3T7BA 4NDPB 2OGXA 2W21A 2J4LA 2BNFA 3AB2A 4AB7A 2E9YA 3S6KA 3K4OA 3WWMA 2WXBA 3QURA 2JJXA 4F6TB 4AXSA 2AKOA 4NDQB 2R8VA 2J5TA 4OLCA 4NDRA 3AAWA 3QVFA 2OGXB 2JJ4A 3K56A 3QUNA 3D2MA 3D2PA 3C20A 1GS5A 1OH9A 2WE4A 3B8GA 1GSJA 2BNDA 4Q1TA 3KZFA 4JZ7A 2AP9A 2JI5A 4A7XA 4A7WA 3K4YA 4USJA 2BMUA 3ZZIA 3WWNA 4NDRB 2J0WA 3K52A 4JZ8A 1OHAA 2HMFA 3LKKA 3L76A 4NDOA 4I49A 1OHBA 1E19A 3D41A 2J5VA 3ZZFA 2BNEA 2CDQA 3TVIA 2BUFA 2A1FA 2BRIA 3QVHA 2IJ9A 2X2WA 2R98A 3L86A 2VA1A 3AB4A 2RD5A 3C1NA 4NDPA 3D40A 4NDOB 3QUOA 3EK5A 4KZTA 2V5HA 2V4YA 1Z9DA 3ZZGA 2J0XA 1B7BA 4F6TA 3LL9A 3EK6A 2BRXA 2J4KA 4NDQA 3ZZHA 1YBDA 3NWYA 4JZ9A 3U6UA 2J4JA
chains in the Genus database with same CATH topology
3LL5A 3S6GA 2BTYA 3S6HA 3C1MA 2WE5A 3T7BA 4NDPB 2OGXA 2W21A 2J4LA 2BNFA 3AB2A 4AB7A 2E9YA 3S6KA 3K4OA 3WWMA 2WXBA 3QURA 2JJXA 4F6TB 4AXSA 2AKOA 4NDQB 2R8VA 2J5TA 4OLCA 4NDRA 3AAWA 3QVFA 2OGXB 2JJ4A 3K56A 3QUNA 3D2MA 3D2PA 3C20A 1GS5A 1OH9A 2WE4A 3B8GA 1GSJA 2BNDA 4Q1TA 3KZFA 4JZ7A 2AP9A 2JI5A 4A7XA 4A7WA 3K4YA 4USJA 2BMUA 3ZZIA 3WWNA 4NDRB 2J0WA 3K52A 4JZ8A 1OHAA 2HMFA 3LKKA 3L76A 4NDOA 4I49A 1OHBA 1E19A 3D41A 2J5VA 3ZZFA 2BNEA 2CDQA 3TVIA 2BUFA 2A1FA 2BRIA 3QVHA 2IJ9A 2X2WA 2R98A 3L86A 2VA1A 3AB4A 2RD5A 3C1NA 4NDPA 3D40A 4NDOB 3QUOA 3EK5A 4KZTA 2V5HA 2V4YA 1Z9DA 3ZZGA 2J0XA 1B7BA 4F6TA 3LL9A 3EK6A 2BRXA 2J4KA 4NDQA 3ZZHA 1YBDA 3NWYA 4JZ9A 3U6UA 2J4JA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LL5 A;  3S6G A;  2BTY A;  3S6H A;  3C1M A;  2WE5 A;  3T7B A;  4NDP B;  2OGX A;  2W21 A;  2J4L A;  2BNF A;  3AB2 A;  4AB7 A;  2E9Y A;  3S6K A;  3K4O A;  3WWM A;  2WXB A;  3QUR A;  2JJX A;  4F6T B;  4AXS A;  2AKO A;  4NDQ B;  2R8V A;  2J5T A;  4OLC A;  4NDR A;  3AAW A;  3QVF A;  2OGX B;  2JJ4 A;  3K56 A;  3QUN A;  3D2M A;  3D2P A;  3C20 A;  1GS5 A;  1OH9 A;  2WE4 A;  3B8G A;  1GSJ A;  2BND A;  4Q1T A;  3KZF A;  4JZ7 A;  2AP9 A;  2JI5 A;  4A7X A;  4A7W A;  3K4Y A;  4USJ A;  2BMU A;  3ZZI A;  3WWN A;  4NDR B;  2J0W A;  3K52 A;  4JZ8 A;  1OHA A;  2HMF A;  3LKK A;  3L76 A;  4NDO A;  4I49 A;  1OHB A;  1E19 A;  3D41 A;  2J5V A;  3ZZF A;  2BNE A;  2CDQ A;  3TVI A;  2BUF A;  2A1F A;  2BRI A;  3QVH A;  2IJ9 A;  2X2W A;  2R98 A;  3L86 A;  2VA1 A;  3AB4 A;  2RD5 A;  3C1N A;  4NDP A;  3D40 A;  4NDO B;  3QUO A;  3EK5 A;  4KZT A;  2V5H A;  2V4Y A;  1Z9D A;  3ZZG A;  2J0X A;  1B7B A;  4F6T A;  3LL9 A;  3EK6 A;  2BRX A;  2J4K A;  4NDQ A;  3ZZH A;  1YBD A;  3NWY A;  4JZ9 A;  3U6U A;  2J4J A; 
#chains in the Genus database with same CATH topology
 3LL5 A;  3S6G A;  2BTY A;  3S6H A;  3C1M A;  2WE5 A;  3T7B A;  4NDP B;  2OGX A;  2W21 A;  2J4L A;  2BNF A;  3AB2 A;  4AB7 A;  2E9Y A;  3S6K A;  3K4O A;  3WWM A;  2WXB A;  3QUR A;  2JJX A;  4F6T B;  4AXS A;  2AKO A;  4NDQ B;  2R8V A;  2J5T A;  4OLC A;  4NDR A;  3AAW A;  3QVF A;  2OGX B;  2JJ4 A;  3K56 A;  3QUN A;  3D2M A;  3D2P A;  3C20 A;  1GS5 A;  1OH9 A;  2WE4 A;  3B8G A;  1GSJ A;  2BND A;  4Q1T A;  3KZF A;  4JZ7 A;  2AP9 A;  2JI5 A;  4A7X A;  4A7W A;  3K4Y A;  4USJ A;  2BMU A;  3ZZI A;  3WWN A;  4NDR B;  2J0W A;  3K52 A;  4JZ8 A;  1OHA A;  2HMF A;  3LKK A;  3L76 A;  4NDO A;  4I49 A;  1OHB A;  1E19 A;  3D41 A;  2J5V A;  3ZZF A;  2BNE A;  2CDQ A;  3TVI A;  2BUF A;  2A1F A;  2BRI A;  3QVH A;  2IJ9 A;  2X2W A;  2R98 A;  3L86 A;  2VA1 A;  3AB4 A;  2RD5 A;  3C1N A;  4NDP A;  3D40 A;  4NDO B;  3QUO A;  3EK5 A;  4KZT A;  2V5H A;  2V4Y A;  1Z9D A;  3ZZG A;  2J0X A;  1B7B A;  4F6T A;  3LL9 A;  3EK6 A;  2BRX A;  2J4K A;  4NDQ A;  3ZZH A;  1YBD A;  3NWY A;  4JZ9 A;  3U6U A;  2J4J A; 
#chains in the Genus database with same CATH homology
 3LL5 A;  3S6G A;  2BTY A;  3S6H A;  3C1M A;  2WE5 A;  3T7B A;  4NDP B;  2OGX A;  2W21 A;  2J4L A;  2BNF A;  3AB2 A;  4AB7 A;  2E9Y A;  3S6K A;  3K4O A;  3WWM A;  2WXB A;  3QUR A;  2JJX A;  4F6T B;  4AXS A;  2AKO A;  4NDQ B;  2R8V A;  2J5T A;  4OLC A;  4NDR A;  3AAW A;  3QVF A;  2OGX B;  2JJ4 A;  3K56 A;  3QUN A;  3D2M A;  3D2P A;  3C20 A;  1GS5 A;  1OH9 A;  2WE4 A;  3B8G A;  1GSJ A;  2BND A;  4Q1T A;  3KZF A;  4JZ7 A;  2AP9 A;  2JI5 A;  4A7X A;  4A7W A;  3K4Y A;  4USJ A;  2BMU A;  3ZZI A;  3WWN A;  4NDR B;  2J0W A;  3K52 A;  4JZ8 A;  1OHA A;  2HMF A;  3LKK A;  3L76 A;  4NDO A;  4I49 A;  1OHB A;  1E19 A;  3D41 A;  2J5V A;  3ZZF A;  2BNE A;  2CDQ A;  3TVI A;  2BUF A;  2A1F A;  2BRI A;  3QVH A;  2IJ9 A;  2X2W A;  2R98 A;  3L86 A;  2VA1 A;  3AB4 A;  2RD5 A;  3C1N A;  4NDP A;  3D40 A;  4NDO B;  3QUO A;  3EK5 A;  4KZT A;  2V5H A;  2V4Y A;  1Z9D A;  3ZZG A;  2J0X A;  1B7B A;  4F6T A;  3LL9 A;  3EK6 A;  2BRX A;  2J4K A;  4NDQ A;  3ZZH A;  1YBD A;  3NWY A;  4JZ9 A;  3U6U A;  2J4J A; 
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