1GSJA

Selenomethionine substituted n-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetyl-l-glutamate and its substrate analog amppnp
Total Genus 78
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
78
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Kinase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
total genus 78
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2002-01-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gsjA00
3L86A 3D40A 3S6KA 2A1FA 3QUOA 2VA1A 3C1MA 2X2WA 3AB2A 2CDQA 2E9YA 2J0XA 2R98A 2RD5A 2JJ4A 3D2PA 4A7XA 1B7BA 4F6TB 4NDPB 1OHBA 3ZZFA 2JI5A 3K56A 2WE5A 2HMFA 2BNEA 4F6TA 4NDPA 2BNFA 2WXBA 3KZFA 4JZ8A 3QURA 3B8GA 3S6GA 4OLCA 3LL5A 2J4JA 2V4YA 2BMUA 2J5VA 4AXSA 4KZTA 2BNDA 3QUNA 4AB7A 2BUFA 3EK5A 2J0WA 3WWNA 3NWYA 4NDRB 3K52A 1GSJA 4NDOB 3QVFA 2W21A 3C1NA 3AAWA 4Q1TA 4NDRA 2BRIA 4NDOA 2BTYA 2BRXA 3LL9A 2OGXB 4USJA 3C20A 3D2MA 3QVHA 2R8VA 3U6UA 2AP9A 3ZZIA 4A7WA 3EK6A 3T7BA 2AKOA 3WWMA 4JZ7A 1E19A 4NDQB 3S6HA 3ZZHA 1Z9DA 2J4KA 3K4YA 4I49A 3K4OA 2JJXA 4NDQA 3LKKA 3AB4A 3L76A 2V5HA 4JZ9A 1OHAA 2J5TA 2WE4A 1OH9A 1YBDA 3TVIA 2OGXA 2J4LA 1GS5A 2IJ9A 3D41A 3ZZGA
chains in the Genus database with same CATH superfamily
3L86A 3D40A 3S6KA 2A1FA 3QUOA 2VA1A 3C1MA 2X2WA 3AB2A 2CDQA 2E9YA 2J0XA 2R98A 2RD5A 2JJ4A 3D2PA 4A7XA 1B7BA 4F6TB 4NDPB 1OHBA 3ZZFA 2JI5A 3K56A 2WE5A 2HMFA 2BNEA 4F6TA 4NDPA 2BNFA 2WXBA 3KZFA 4JZ8A 3QURA 3B8GA 3S6GA 4OLCA 3LL5A 2J4JA 2V4YA 2BMUA 2J5VA 4AXSA 4KZTA 2BNDA 3QUNA 4AB7A 2BUFA 3EK5A 2J0WA 3WWNA 3NWYA 4NDRB 3K52A 1GSJA 4NDOB 3QVFA 2W21A 3C1NA 3AAWA 4Q1TA 4NDRA 2BRIA 4NDOA 2BTYA 2BRXA 3LL9A 2OGXB 4USJA 3C20A 3D2MA 3QVHA 2R8VA 3U6UA 2AP9A 3ZZIA 4A7WA 3EK6A 3T7BA 2AKOA 3WWMA 4JZ7A 1E19A 4NDQB 3S6HA 3ZZHA 1Z9DA 2J4KA 3K4YA 4I49A 3K4OA 2JJXA 4NDQA 3LKKA 3AB4A 3L76A 2V5HA 4JZ9A 1OHAA 2J5TA 2WE4A 1OH9A 1YBDA 3TVIA 2OGXA 2J4LA 1GS5A 2IJ9A 3D41A 3ZZGA
chains in the Genus database with same CATH topology
3L86A 3D40A 3S6KA 2A1FA 3QUOA 2VA1A 3C1MA 2X2WA 3AB2A 2CDQA 2E9YA 2J0XA 2R98A 2RD5A 2JJ4A 3D2PA 4A7XA 1B7BA 4F6TB 4NDPB 1OHBA 3ZZFA 2JI5A 3K56A 2WE5A 2HMFA 2BNEA 4F6TA 4NDPA 2BNFA 2WXBA 3KZFA 4JZ8A 3QURA 3B8GA 3S6GA 4OLCA 3LL5A 2J4JA 2V4YA 2BMUA 2J5VA 4AXSA 4KZTA 2BNDA 3QUNA 4AB7A 2BUFA 3EK5A 2J0WA 3WWNA 3NWYA 4NDRB 3K52A 1GSJA 4NDOB 3QVFA 2W21A 3C1NA 3AAWA 4Q1TA 4NDRA 2BRIA 4NDOA 2BTYA 2BRXA 3LL9A 2OGXB 4USJA 3C20A 3D2MA 3QVHA 2R8VA 3U6UA 2AP9A 3ZZIA 4A7WA 3EK6A 3T7BA 2AKOA 3WWMA 4JZ7A 1E19A 4NDQB 3S6HA 3ZZHA 1Z9DA 2J4KA 3K4YA 4I49A 3K4OA 2JJXA 4NDQA 3LKKA 3AB4A 3L76A 2V5HA 4JZ9A 1OHAA 2J5TA 2WE4A 1OH9A 1YBDA 3TVIA 2OGXA 2J4LA 1GS5A 2IJ9A 3D41A 3ZZGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3L86 A;  3D40 A;  3S6K A;  2A1F A;  3QUO A;  2VA1 A;  3C1M A;  2X2W A;  3AB2 A;  2CDQ A;  2E9Y A;  2J0X A;  2R98 A;  2RD5 A;  2JJ4 A;  3D2P A;  4A7X A;  1B7B A;  4F6T B;  4NDP B;  1OHB A;  3ZZF A;  2JI5 A;  3K56 A;  2WE5 A;  2HMF A;  2BNE A;  4F6T A;  4NDP A;  2BNF A;  2WXB A;  3KZF A;  4JZ8 A;  3QUR A;  3B8G A;  3S6G A;  4OLC A;  3LL5 A;  2J4J A;  2V4Y A;  2BMU A;  2J5V A;  4AXS A;  4KZT A;  2BND A;  3QUN A;  4AB7 A;  2BUF A;  3EK5 A;  2J0W A;  3WWN A;  3NWY A;  4NDR B;  3K52 A;  1GSJ A;  4NDO B;  3QVF A;  2W21 A;  3C1N A;  3AAW A;  4Q1T A;  4NDR A;  2BRI A;  4NDO A;  2BTY A;  2BRX A;  3LL9 A;  2OGX B;  4USJ A;  3C20 A;  3D2M A;  3QVH A;  2R8V A;  3U6U A;  2AP9 A;  3ZZI A;  4A7W A;  3EK6 A;  3T7B A;  2AKO A;  3WWM A;  4JZ7 A;  1E19 A;  4NDQ B;  3S6H A;  3ZZH A;  1Z9D A;  2J4K A;  3K4Y A;  4I49 A;  3K4O A;  2JJX A;  4NDQ A;  3LKK A;  3AB4 A;  3L76 A;  2V5H A;  4JZ9 A;  1OHA A;  2J5T A;  2WE4 A;  1OH9 A;  1YBD A;  3TVI A;  2OGX A;  2J4L A;  1GS5 A;  2IJ9 A;  3D41 A;  3ZZG A; 
#chains in the Genus database with same CATH topology
 3L86 A;  3D40 A;  3S6K A;  2A1F A;  3QUO A;  2VA1 A;  3C1M A;  2X2W A;  3AB2 A;  2CDQ A;  2E9Y A;  2J0X A;  2R98 A;  2RD5 A;  2JJ4 A;  3D2P A;  4A7X A;  1B7B A;  4F6T B;  4NDP B;  1OHB A;  3ZZF A;  2JI5 A;  3K56 A;  2WE5 A;  2HMF A;  2BNE A;  4F6T A;  4NDP A;  2BNF A;  2WXB A;  3KZF A;  4JZ8 A;  3QUR A;  3B8G A;  3S6G A;  4OLC A;  3LL5 A;  2J4J A;  2V4Y A;  2BMU A;  2J5V A;  4AXS A;  4KZT A;  2BND A;  3QUN A;  4AB7 A;  2BUF A;  3EK5 A;  2J0W A;  3WWN A;  3NWY A;  4NDR B;  3K52 A;  1GSJ A;  4NDO B;  3QVF A;  2W21 A;  3C1N A;  3AAW A;  4Q1T A;  4NDR A;  2BRI A;  4NDO A;  2BTY A;  2BRX A;  3LL9 A;  2OGX B;  4USJ A;  3C20 A;  3D2M A;  3QVH A;  2R8V A;  3U6U A;  2AP9 A;  3ZZI A;  4A7W A;  3EK6 A;  3T7B A;  2AKO A;  3WWM A;  4JZ7 A;  1E19 A;  4NDQ B;  3S6H A;  3ZZH A;  1Z9D A;  2J4K A;  3K4Y A;  4I49 A;  3K4O A;  2JJX A;  4NDQ A;  3LKK A;  3AB4 A;  3L76 A;  2V5H A;  4JZ9 A;  1OHA A;  2J5T A;  2WE4 A;  1OH9 A;  1YBD A;  3TVI A;  2OGX A;  2J4L A;  1GS5 A;  2IJ9 A;  3D41 A;  3ZZG A; 
#chains in the Genus database with same CATH homology
 3L86 A;  3D40 A;  3S6K A;  2A1F A;  3QUO A;  2VA1 A;  3C1M A;  2X2W A;  3AB2 A;  2CDQ A;  2E9Y A;  2J0X A;  2R98 A;  2RD5 A;  2JJ4 A;  3D2P A;  4A7X A;  1B7B A;  4F6T B;  4NDP B;  1OHB A;  3ZZF A;  2JI5 A;  3K56 A;  2WE5 A;  2HMF A;  2BNE A;  4F6T A;  4NDP A;  2BNF A;  2WXB A;  3KZF A;  4JZ8 A;  3QUR A;  3B8G A;  3S6G A;  4OLC A;  3LL5 A;  2J4J A;  2V4Y A;  2BMU A;  2J5V A;  4AXS A;  4KZT A;  2BND A;  3QUN A;  4AB7 A;  2BUF A;  3EK5 A;  2J0W A;  3WWN A;  3NWY A;  4NDR B;  3K52 A;  1GSJ A;  4NDO B;  3QVF A;  2W21 A;  3C1N A;  3AAW A;  4Q1T A;  4NDR A;  2BRI A;  4NDO A;  2BTY A;  2BRX A;  3LL9 A;  2OGX B;  4USJ A;  3C20 A;  3D2M A;  3QVH A;  2R8V A;  3U6U A;  2AP9 A;  3ZZI A;  4A7W A;  3EK6 A;  3T7B A;  2AKO A;  3WWM A;  4JZ7 A;  1E19 A;  4NDQ B;  3S6H A;  3ZZH A;  1Z9D A;  2J4K A;  3K4Y A;  4I49 A;  3K4O A;  2JJX A;  4NDQ A;  3LKK A;  3AB4 A;  3L76 A;  2V5H A;  4JZ9 A;  1OHA A;  2J5T A;  2WE4 A;  1OH9 A;  1YBD A;  3TVI A;  2OGX A;  2J4L A;  1GS5 A;  2IJ9 A;  3D41 A;  3ZZG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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