1GSJA

Selenomethionine substituted n-acetyl-l-glutamate kinase from escherichia coli complexed with its substrate n-acetyl-l-glutamate and its substrate analog amppnp
Total Genus 78
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
78
sequence length
258
structure length
258
Chain Sequence
MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ACETYLGLUTAMATE KINASE
publication title Structure of Acetylglutamate Kinase, a Key Enzyme for Arginine Biosynthesis and a Prototype for the Amino Acid Kinase Enzyme Family, During Catalysis
pubmed doi rcsb
source organism Escherichia coli bl21(de3)
molecule tags Kinase
total genus 78
structure length 258
sequence length 258
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2002-01-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 1gsjA00
3TVIA 3K52A 3LL9A 3ZZIA 3B8GA 2RD5A 2IJ9A 4JZ7A 2J5VA 3AAWA 2AP9A 3KZFA 3S6HA 2CDQA 1OHBA 2V4YA 2E9YA 2OGXB 3WWMA 1OH9A 3K4OA 2J0WA 2HMFA 2BUFA 2J4KA 4A7XA 2BMUA 3QVHA 3ZZHA 2VA1A 3K56A 1Z9DA 2BNDA 3NWYA 2BNEA 4AB7A 3ZZGA 3WWNA 3AB2A 2OGXA 2W21A 4OLCA 1GS5A 1OHAA 2WE4A 3D2PA 3L76A 1YBDA 2AKOA 2V5HA 3C20A 4NDOB 3EK6A 2J4JA 3LKKA 4JZ8A 4AXSA 4NDRA 4NDRB 1E19A 3QUNA 3T7BA 2JJXA 4F6TB 3LL5A 2J5TA 2BRXA 3AB4A 1B7BA 2BRIA 3EK5A 2J4LA 3K4YA 2WXBA 3D2MA 4NDQA 1GSJA 4NDPA 4NDQB 3D41A 4NDPB 4NDOA 4KZTA 3QURA 2A1FA 4USJA 2R8VA 4JZ9A 2JJ4A 3D40A 3QVFA 2X2WA 4A7WA 2BNFA 4F6TA 2BTYA 4Q1TA 2R98A 3QUOA 4I49A 3U6UA 3ZZFA 2WE5A 3C1MA 2JI5A 3L86A 3S6KA 2J0XA 3C1NA 3S6GA
chains in the Genus database with same CATH superfamily
3TVIA 3K52A 3LL9A 3ZZIA 3B8GA 2RD5A 2IJ9A 4JZ7A 2J5VA 3AAWA 2AP9A 3KZFA 3S6HA 2CDQA 1OHBA 2V4YA 2E9YA 2OGXB 3WWMA 1OH9A 3K4OA 2J0WA 2HMFA 2BUFA 2J4KA 4A7XA 2BMUA 3QVHA 3ZZHA 2VA1A 3K56A 1Z9DA 2BNDA 3NWYA 2BNEA 4AB7A 3ZZGA 3WWNA 3AB2A 2OGXA 2W21A 4OLCA 1GS5A 1OHAA 2WE4A 3D2PA 3L76A 1YBDA 2AKOA 2V5HA 3C20A 4NDOB 3EK6A 2J4JA 3LKKA 4JZ8A 4AXSA 4NDRA 4NDRB 1E19A 3QUNA 3T7BA 2JJXA 4F6TB 3LL5A 2J5TA 2BRXA 3AB4A 1B7BA 2BRIA 3EK5A 2J4LA 3K4YA 2WXBA 3D2MA 4NDQA 1GSJA 4NDPA 4NDQB 3D41A 4NDPB 4NDOA 4KZTA 3QURA 2A1FA 4USJA 2R8VA 4JZ9A 2JJ4A 3D40A 3QVFA 2X2WA 4A7WA 2BNFA 4F6TA 2BTYA 4Q1TA 2R98A 3QUOA 4I49A 3U6UA 3ZZFA 2WE5A 3C1MA 2JI5A 3L86A 3S6KA 2J0XA 3C1NA 3S6GA
chains in the Genus database with same CATH topology
3TVIA 3K52A 3LL9A 3ZZIA 3B8GA 2RD5A 2IJ9A 4JZ7A 2J5VA 3AAWA 2AP9A 3KZFA 3S6HA 2CDQA 1OHBA 2V4YA 2E9YA 2OGXB 3WWMA 1OH9A 3K4OA 2J0WA 2HMFA 2BUFA 2J4KA 4A7XA 2BMUA 3QVHA 3ZZHA 2VA1A 3K56A 1Z9DA 2BNDA 3NWYA 2BNEA 4AB7A 3ZZGA 3WWNA 3AB2A 2OGXA 2W21A 4OLCA 1GS5A 1OHAA 2WE4A 3D2PA 3L76A 1YBDA 2AKOA 2V5HA 3C20A 4NDOB 3EK6A 2J4JA 3LKKA 4JZ8A 4AXSA 4NDRA 4NDRB 1E19A 3QUNA 3T7BA 2JJXA 4F6TB 3LL5A 2J5TA 2BRXA 3AB4A 1B7BA 2BRIA 3EK5A 2J4LA 3K4YA 2WXBA 3D2MA 4NDQA 1GSJA 4NDPA 4NDQB 3D41A 4NDPB 4NDOA 4KZTA 3QURA 2A1FA 4USJA 2R8VA 4JZ9A 2JJ4A 3D40A 3QVFA 2X2WA 4A7WA 2BNFA 4F6TA 2BTYA 4Q1TA 2R98A 3QUOA 4I49A 3U6UA 3ZZFA 2WE5A 3C1MA 2JI5A 3L86A 3S6KA 2J0XA 3C1NA 3S6GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TVI A;  3K52 A;  3LL9 A;  3ZZI A;  3B8G A;  2RD5 A;  2IJ9 A;  4JZ7 A;  2J5V A;  3AAW A;  2AP9 A;  3KZF A;  3S6H A;  2CDQ A;  1OHB A;  2V4Y A;  2E9Y A;  2OGX B;  3WWM A;  1OH9 A;  3K4O A;  2J0W A;  2HMF A;  2BUF A;  2J4K A;  4A7X A;  2BMU A;  3QVH A;  3ZZH A;  2VA1 A;  3K56 A;  1Z9D A;  2BND A;  3NWY A;  2BNE A;  4AB7 A;  3ZZG A;  3WWN A;  3AB2 A;  2OGX A;  2W21 A;  4OLC A;  1GS5 A;  1OHA A;  2WE4 A;  3D2P A;  3L76 A;  1YBD A;  2AKO A;  2V5H A;  3C20 A;  4NDO B;  3EK6 A;  2J4J A;  3LKK A;  4JZ8 A;  4AXS A;  4NDR A;  4NDR B;  1E19 A;  3QUN A;  3T7B A;  2JJX A;  4F6T B;  3LL5 A;  2J5T A;  2BRX A;  3AB4 A;  1B7B A;  2BRI A;  3EK5 A;  2J4L A;  3K4Y A;  2WXB A;  3D2M A;  4NDQ A;  1GSJ A;  4NDP A;  4NDQ B;  3D41 A;  4NDP B;  4NDO A;  4KZT A;  3QUR A;  2A1F A;  4USJ A;  2R8V A;  4JZ9 A;  2JJ4 A;  3D40 A;  3QVF A;  2X2W A;  4A7W A;  2BNF A;  4F6T A;  2BTY A;  4Q1T A;  2R98 A;  3QUO A;  4I49 A;  3U6U A;  3ZZF A;  2WE5 A;  3C1M A;  2JI5 A;  3L86 A;  3S6K A;  2J0X A;  3C1N A;  3S6G A; 
#chains in the Genus database with same CATH topology
 3TVI A;  3K52 A;  3LL9 A;  3ZZI A;  3B8G A;  2RD5 A;  2IJ9 A;  4JZ7 A;  2J5V A;  3AAW A;  2AP9 A;  3KZF A;  3S6H A;  2CDQ A;  1OHB A;  2V4Y A;  2E9Y A;  2OGX B;  3WWM A;  1OH9 A;  3K4O A;  2J0W A;  2HMF A;  2BUF A;  2J4K A;  4A7X A;  2BMU A;  3QVH A;  3ZZH A;  2VA1 A;  3K56 A;  1Z9D A;  2BND A;  3NWY A;  2BNE A;  4AB7 A;  3ZZG A;  3WWN A;  3AB2 A;  2OGX A;  2W21 A;  4OLC A;  1GS5 A;  1OHA A;  2WE4 A;  3D2P A;  3L76 A;  1YBD A;  2AKO A;  2V5H A;  3C20 A;  4NDO B;  3EK6 A;  2J4J A;  3LKK A;  4JZ8 A;  4AXS A;  4NDR A;  4NDR B;  1E19 A;  3QUN A;  3T7B A;  2JJX A;  4F6T B;  3LL5 A;  2J5T A;  2BRX A;  3AB4 A;  1B7B A;  2BRI A;  3EK5 A;  2J4L A;  3K4Y A;  2WXB A;  3D2M A;  4NDQ A;  1GSJ A;  4NDP A;  4NDQ B;  3D41 A;  4NDP B;  4NDO A;  4KZT A;  3QUR A;  2A1F A;  4USJ A;  2R8V A;  4JZ9 A;  2JJ4 A;  3D40 A;  3QVF A;  2X2W A;  4A7W A;  2BNF A;  4F6T A;  2BTY A;  4Q1T A;  2R98 A;  3QUO A;  4I49 A;  3U6U A;  3ZZF A;  2WE5 A;  3C1M A;  2JI5 A;  3L86 A;  3S6K A;  2J0X A;  3C1N A;  3S6G A; 
#chains in the Genus database with same CATH homology
 3TVI A;  3K52 A;  3LL9 A;  3ZZI A;  3B8G A;  2RD5 A;  2IJ9 A;  4JZ7 A;  2J5V A;  3AAW A;  2AP9 A;  3KZF A;  3S6H A;  2CDQ A;  1OHB A;  2V4Y A;  2E9Y A;  2OGX B;  3WWM A;  1OH9 A;  3K4O A;  2J0W A;  2HMF A;  2BUF A;  2J4K A;  4A7X A;  2BMU A;  3QVH A;  3ZZH A;  2VA1 A;  3K56 A;  1Z9D A;  2BND A;  3NWY A;  2BNE A;  4AB7 A;  3ZZG A;  3WWN A;  3AB2 A;  2OGX A;  2W21 A;  4OLC A;  1GS5 A;  1OHA A;  2WE4 A;  3D2P A;  3L76 A;  1YBD A;  2AKO A;  2V5H A;  3C20 A;  4NDO B;  3EK6 A;  2J4J A;  3LKK A;  4JZ8 A;  4AXS A;  4NDR A;  4NDR B;  1E19 A;  3QUN A;  3T7B A;  2JJX A;  4F6T B;  3LL5 A;  2J5T A;  2BRX A;  3AB4 A;  1B7B A;  2BRI A;  3EK5 A;  2J4L A;  3K4Y A;  2WXB A;  3D2M A;  4NDQ A;  1GSJ A;  4NDP A;  4NDQ B;  3D41 A;  4NDP B;  4NDO A;  4KZT A;  3QUR A;  2A1F A;  4USJ A;  2R8V A;  4JZ9 A;  2JJ4 A;  3D40 A;  3QVF A;  2X2W A;  4A7W A;  2BNF A;  4F6T A;  2BTY A;  4Q1T A;  2R98 A;  3QUO A;  4I49 A;  3U6U A;  3ZZF A;  2WE5 A;  3C1M A;  2JI5 A;  3L86 A;  3S6K A;  2J0X A;  3C1N A;  3S6G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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