2BTYA

Acetylglutamate kinase from thermotoga maritima complexed with its inhibitor arginine
Total Genus 97
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
97
sequence length
282
structure length
282
Chain Sequence
MRIDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKELEG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
molecule tags Transferase
source organism Thermotoga maritima
total genus 97
structure length 282
sequence length 282
chains with identical sequence B, C
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2btyA00
2BNEA 3QVHA 2WE5A 3AB4A 3K4OA 2BRXA 2J4LA 3S6KA 4AXSA 3K56A 2W21A 2AKOA 4F6TB 2WE4A 2BUFA 3K52A 3TVIA 3S6HA 3C1MA 2OGXB 3D2MA 3ZZGA 3QUOA 2BMUA 2E9YA 2V4YA 3EK5A 3B8GA 4A7WA 2J5TA 2HMFA 4JZ7A 3LL9A 2VA1A 4JZ9A 1YBDA 2AP9A 2X2WA 3ZZFA 4F6TA 4I49A 4NDRB 2JJ4A 3C1NA 1B7BA 2BNFA 4Q1TA 3U6UA 3D2PA 3LKKA 3D41A 2OGXA 3ZZHA 3KZFA 2J5VA 3S6GA 1OHBA 3EK6A 2CDQA 3QVFA 3K4YA 3QURA 2R8VA 2J4KA 3ZZIA 3WWNA 3T7BA 4KZTA 2J0WA 2JI5A 3WWMA 4NDRA 2BRIA 1GSJA 1Z9DA 2RD5A 2WXBA 4NDQB 4AB7A 2R98A 3AAWA 4A7XA 2IJ9A 3LL5A 3C20A 4OLCA 1E19A 2JJXA 4NDPA 3D40A 2V5HA 2J0XA 2A1FA 4NDPB 4JZ8A 1GS5A 4NDOA 1OHAA 3L76A 4NDQA 4NDOB 2J4JA 3NWYA 3QUNA 3AB2A 3L86A 2BNDA 4USJA 2BTYA 1OH9A
chains in the Genus database with same CATH superfamily
2BNEA 3QVHA 2WE5A 3AB4A 3K4OA 2BRXA 2J4LA 3S6KA 4AXSA 3K56A 2W21A 2AKOA 4F6TB 2WE4A 2BUFA 3K52A 3TVIA 3S6HA 3C1MA 2OGXB 3D2MA 3ZZGA 3QUOA 2BMUA 2E9YA 2V4YA 3EK5A 3B8GA 4A7WA 2J5TA 2HMFA 4JZ7A 3LL9A 2VA1A 4JZ9A 1YBDA 2AP9A 2X2WA 3ZZFA 4F6TA 4I49A 4NDRB 2JJ4A 3C1NA 1B7BA 2BNFA 4Q1TA 3U6UA 3D2PA 3LKKA 3D41A 2OGXA 3ZZHA 3KZFA 2J5VA 3S6GA 1OHBA 3EK6A 2CDQA 3QVFA 3K4YA 3QURA 2R8VA 2J4KA 3ZZIA 3WWNA 3T7BA 4KZTA 2J0WA 2JI5A 3WWMA 4NDRA 2BRIA 1GSJA 1Z9DA 2RD5A 2WXBA 4NDQB 4AB7A 2R98A 3AAWA 4A7XA 2IJ9A 3LL5A 3C20A 4OLCA 1E19A 2JJXA 4NDPA 3D40A 2V5HA 2J0XA 2A1FA 4NDPB 4JZ8A 1GS5A 4NDOA 1OHAA 3L76A 4NDQA 4NDOB 2J4JA 3NWYA 3QUNA 3AB2A 3L86A 2BNDA 4USJA 2BTYA 1OH9A
chains in the Genus database with same CATH topology
2BNEA 3QVHA 2WE5A 3AB4A 3K4OA 2BRXA 2J4LA 3S6KA 4AXSA 3K56A 2W21A 2AKOA 4F6TB 2WE4A 2BUFA 3K52A 3TVIA 3S6HA 3C1MA 2OGXB 3D2MA 3ZZGA 3QUOA 2BMUA 2E9YA 2V4YA 3EK5A 3B8GA 4A7WA 2J5TA 2HMFA 4JZ7A 3LL9A 2VA1A 4JZ9A 1YBDA 2AP9A 2X2WA 3ZZFA 4F6TA 4I49A 4NDRB 2JJ4A 3C1NA 1B7BA 2BNFA 4Q1TA 3U6UA 3D2PA 3LKKA 3D41A 2OGXA 3ZZHA 3KZFA 2J5VA 3S6GA 1OHBA 3EK6A 2CDQA 3QVFA 3K4YA 3QURA 2R8VA 2J4KA 3ZZIA 3WWNA 3T7BA 4KZTA 2J0WA 2JI5A 3WWMA 4NDRA 2BRIA 1GSJA 1Z9DA 2RD5A 2WXBA 4NDQB 4AB7A 2R98A 3AAWA 4A7XA 2IJ9A 3LL5A 3C20A 4OLCA 1E19A 2JJXA 4NDPA 3D40A 2V5HA 2J0XA 2A1FA 4NDPB 4JZ8A 1GS5A 4NDOA 1OHAA 3L76A 4NDQA 4NDOB 2J4JA 3NWYA 3QUNA 3AB2A 3L86A 2BNDA 4USJA 2BTYA 1OH9A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2BNE A;  3QVH A;  2WE5 A;  3AB4 A;  3K4O A;  2BRX A;  2J4L A;  3S6K A;  4AXS A;  3K56 A;  2W21 A;  2AKO A;  4F6T B;  2WE4 A;  2BUF A;  3K52 A;  3TVI A;  3S6H A;  3C1M A;  2OGX B;  3D2M A;  3ZZG A;  3QUO A;  2BMU A;  2E9Y A;  2V4Y A;  3EK5 A;  3B8G A;  4A7W A;  2J5T A;  2HMF A;  4JZ7 A;  3LL9 A;  2VA1 A;  4JZ9 A;  1YBD A;  2AP9 A;  2X2W A;  3ZZF A;  4F6T A;  4I49 A;  4NDR B;  2JJ4 A;  3C1N A;  1B7B A;  2BNF A;  4Q1T A;  3U6U A;  3D2P A;  3LKK A;  3D41 A;  2OGX A;  3ZZH A;  3KZF A;  2J5V A;  3S6G A;  1OHB A;  3EK6 A;  2CDQ A;  3QVF A;  3K4Y A;  3QUR A;  2R8V A;  2J4K A;  3ZZI A;  3WWN A;  3T7B A;  4KZT A;  2J0W A;  2JI5 A;  3WWM A;  4NDR A;  2BRI A;  1GSJ A;  1Z9D A;  2RD5 A;  2WXB A;  4NDQ B;  4AB7 A;  2R98 A;  3AAW A;  4A7X A;  2IJ9 A;  3LL5 A;  3C20 A;  4OLC A;  1E19 A;  2JJX A;  4NDP A;  3D40 A;  2V5H A;  2J0X A;  2A1F A;  4NDP B;  4JZ8 A;  1GS5 A;  4NDO A;  1OHA A;  3L76 A;  4NDQ A;  4NDO B;  2J4J A;  3NWY A;  3QUN A;  3AB2 A;  3L86 A;  2BND A;  4USJ A;  2BTY A;  1OH9 A; 
#chains in the Genus database with same CATH topology
 2BNE A;  3QVH A;  2WE5 A;  3AB4 A;  3K4O A;  2BRX A;  2J4L A;  3S6K A;  4AXS A;  3K56 A;  2W21 A;  2AKO A;  4F6T B;  2WE4 A;  2BUF A;  3K52 A;  3TVI A;  3S6H A;  3C1M A;  2OGX B;  3D2M A;  3ZZG A;  3QUO A;  2BMU A;  2E9Y A;  2V4Y A;  3EK5 A;  3B8G A;  4A7W A;  2J5T A;  2HMF A;  4JZ7 A;  3LL9 A;  2VA1 A;  4JZ9 A;  1YBD A;  2AP9 A;  2X2W A;  3ZZF A;  4F6T A;  4I49 A;  4NDR B;  2JJ4 A;  3C1N A;  1B7B A;  2BNF A;  4Q1T A;  3U6U A;  3D2P A;  3LKK A;  3D41 A;  2OGX A;  3ZZH A;  3KZF A;  2J5V A;  3S6G A;  1OHB A;  3EK6 A;  2CDQ A;  3QVF A;  3K4Y A;  3QUR A;  2R8V A;  2J4K A;  3ZZI A;  3WWN A;  3T7B A;  4KZT A;  2J0W A;  2JI5 A;  3WWM A;  4NDR A;  2BRI A;  1GSJ A;  1Z9D A;  2RD5 A;  2WXB A;  4NDQ B;  4AB7 A;  2R98 A;  3AAW A;  4A7X A;  2IJ9 A;  3LL5 A;  3C20 A;  4OLC A;  1E19 A;  2JJX A;  4NDP A;  3D40 A;  2V5H A;  2J0X A;  2A1F A;  4NDP B;  4JZ8 A;  1GS5 A;  4NDO A;  1OHA A;  3L76 A;  4NDQ A;  4NDO B;  2J4J A;  3NWY A;  3QUN A;  3AB2 A;  3L86 A;  2BND A;  4USJ A;  2BTY A;  1OH9 A; 
#chains in the Genus database with same CATH homology
 2BNE A;  3QVH A;  2WE5 A;  3AB4 A;  3K4O A;  2BRX A;  2J4L A;  3S6K A;  4AXS A;  3K56 A;  2W21 A;  2AKO A;  4F6T B;  2WE4 A;  2BUF A;  3K52 A;  3TVI A;  3S6H A;  3C1M A;  2OGX B;  3D2M A;  3ZZG A;  3QUO A;  2BMU A;  2E9Y A;  2V4Y A;  3EK5 A;  3B8G A;  4A7W A;  2J5T A;  2HMF A;  4JZ7 A;  3LL9 A;  2VA1 A;  4JZ9 A;  1YBD A;  2AP9 A;  2X2W A;  3ZZF A;  4F6T A;  4I49 A;  4NDR B;  2JJ4 A;  3C1N A;  1B7B A;  2BNF A;  4Q1T A;  3U6U A;  3D2P A;  3LKK A;  3D41 A;  2OGX A;  3ZZH A;  3KZF A;  2J5V A;  3S6G A;  1OHB A;  3EK6 A;  2CDQ A;  3QVF A;  3K4Y A;  3QUR A;  2R8V A;  2J4K A;  3ZZI A;  3WWN A;  3T7B A;  4KZT A;  2J0W A;  2JI5 A;  3WWM A;  4NDR A;  2BRI A;  1GSJ A;  1Z9D A;  2RD5 A;  2WXB A;  4NDQ B;  4AB7 A;  2R98 A;  3AAW A;  4A7X A;  2IJ9 A;  3LL5 A;  3C20 A;  4OLC A;  1E19 A;  2JJX A;  4NDP A;  3D40 A;  2V5H A;  2J0X A;  2A1F A;  4NDP B;  4JZ8 A;  1GS5 A;  4NDO A;  1OHA A;  3L76 A;  4NDQ A;  4NDO B;  2J4J A;  3NWY A;  3QUN A;  3AB2 A;  3L86 A;  2BND A;  4USJ A;  2BTY A;  1OH9 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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