2BTYA

Acetylglutamate kinase from thermotoga maritima complexed with its inhibitor arginine
Total Genus 97
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
97
sequence length
282
structure length
282
Chain Sequence
MRIDTVNVLLEALPYIKEFYGKTFVIKFGGSAMKQENAKKAFIQDIILLKYTGIKPIIVHGGGPAISQMMKDLGIEPVFKNGHRVTDEKTMEIVEMVLVGKINKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNPEILHALIENDYIPVIAPVGIGEDGHSYNINADTAAAEIAKSLMAEKLILLTDVDGVLKDGKLISTLTPDEAEELIRDGTVTGGMIPKVECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKELEG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
molecule tags Transferase
source organism Thermotoga maritima
total genus 97
structure length 282
sequence length 282
chains with identical sequence B, C
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2btyA00
3K4YA 3EK6A 1GSJA 3C20A 4Q1TA 1Z9DA 1OHAA 2BNFA 2OGXB 4JZ7A 4USJA 2RD5A 2WE5A 3U6UA 4NDQB 2BNEA 3B8GA 4NDRA 2J5TA 3T7BA 2JI5A 3AAWA 2J4JA 2X2WA 4NDOA 3KZFA 3D40A 3D41A 2R98A 4F6TB 3K56A 1B7BA 3QURA 3D2MA 2J4LA 3WWMA 3EK5A 2AKOA 3D2PA 3QVHA 2OGXA 2W21A 3NWYA 1OH9A 1E19A 4NDQA 1YBDA 3LL9A 3AB4A 3K4OA 2BRIA 2J4KA 3ZZFA 3L76A 4NDPA 3QUNA 2BRXA 3S6KA 2V4YA 4F6TA 2AP9A 2J0WA 4KZTA 3TVIA 4AXSA 3C1MA 2J5VA 3S6GA 4A7XA 3QUOA 2JJXA 2WE4A 2IJ9A 3WWNA 2BUFA 4A7WA 2V5HA 3ZZGA 1OHBA 3AB2A 4JZ8A 2BNDA 2A1FA 3ZZIA 3ZZHA 2BTYA 2HMFA 4AB7A 3S6HA 2CDQA 3QVFA 3L86A 3LL5A 2R8VA 2J0XA 2E9YA 2BMUA 4NDRB 4OLCA 4NDPB 1GS5A 2VA1A 4I49A 3LKKA 3C1NA 4JZ9A 3K52A 4NDOB 2JJ4A 2WXBA
chains in the Genus database with same CATH superfamily
3K4YA 3EK6A 1GSJA 3C20A 4Q1TA 1Z9DA 1OHAA 2BNFA 2OGXB 4JZ7A 4USJA 2RD5A 2WE5A 3U6UA 4NDQB 2BNEA 3B8GA 4NDRA 2J5TA 3T7BA 2JI5A 3AAWA 2J4JA 2X2WA 4NDOA 3KZFA 3D40A 3D41A 2R98A 4F6TB 3K56A 1B7BA 3QURA 3D2MA 2J4LA 3WWMA 3EK5A 2AKOA 3D2PA 3QVHA 2OGXA 2W21A 3NWYA 1OH9A 1E19A 4NDQA 1YBDA 3LL9A 3AB4A 3K4OA 2BRIA 2J4KA 3ZZFA 3L76A 4NDPA 3QUNA 2BRXA 3S6KA 2V4YA 4F6TA 2AP9A 2J0WA 4KZTA 3TVIA 4AXSA 3C1MA 2J5VA 3S6GA 4A7XA 3QUOA 2JJXA 2WE4A 2IJ9A 3WWNA 2BUFA 4A7WA 2V5HA 3ZZGA 1OHBA 3AB2A 4JZ8A 2BNDA 2A1FA 3ZZIA 3ZZHA 2BTYA 2HMFA 4AB7A 3S6HA 2CDQA 3QVFA 3L86A 3LL5A 2R8VA 2J0XA 2E9YA 2BMUA 4NDRB 4OLCA 4NDPB 1GS5A 2VA1A 4I49A 3LKKA 3C1NA 4JZ9A 3K52A 4NDOB 2JJ4A 2WXBA
chains in the Genus database with same CATH topology
3K4YA 3EK6A 1GSJA 3C20A 4Q1TA 1Z9DA 1OHAA 2BNFA 2OGXB 4JZ7A 4USJA 2RD5A 2WE5A 3U6UA 4NDQB 2BNEA 3B8GA 4NDRA 2J5TA 3T7BA 2JI5A 3AAWA 2J4JA 2X2WA 4NDOA 3KZFA 3D40A 3D41A 2R98A 4F6TB 3K56A 1B7BA 3QURA 3D2MA 2J4LA 3WWMA 3EK5A 2AKOA 3D2PA 3QVHA 2OGXA 2W21A 3NWYA 1OH9A 1E19A 4NDQA 1YBDA 3LL9A 3AB4A 3K4OA 2BRIA 2J4KA 3ZZFA 3L76A 4NDPA 3QUNA 2BRXA 3S6KA 2V4YA 4F6TA 2AP9A 2J0WA 4KZTA 3TVIA 4AXSA 3C1MA 2J5VA 3S6GA 4A7XA 3QUOA 2JJXA 2WE4A 2IJ9A 3WWNA 2BUFA 4A7WA 2V5HA 3ZZGA 1OHBA 3AB2A 4JZ8A 2BNDA 2A1FA 3ZZIA 3ZZHA 2BTYA 2HMFA 4AB7A 3S6HA 2CDQA 3QVFA 3L86A 3LL5A 2R8VA 2J0XA 2E9YA 2BMUA 4NDRB 4OLCA 4NDPB 1GS5A 2VA1A 4I49A 3LKKA 3C1NA 4JZ9A 3K52A 4NDOB 2JJ4A 2WXBA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 3K4Y A;  3EK6 A;  1GSJ A;  3C20 A;  4Q1T A;  1Z9D A;  1OHA A;  2BNF A;  2OGX B;  4JZ7 A;  4USJ A;  2RD5 A;  2WE5 A;  3U6U A;  4NDQ B;  2BNE A;  3B8G A;  4NDR A;  2J5T A;  3T7B A;  2JI5 A;  3AAW A;  2J4J A;  2X2W A;  4NDO A;  3KZF A;  3D40 A;  3D41 A;  2R98 A;  4F6T B;  3K56 A;  1B7B A;  3QUR A;  3D2M A;  2J4L A;  3WWM A;  3EK5 A;  2AKO A;  3D2P A;  3QVH A;  2OGX A;  2W21 A;  3NWY A;  1OH9 A;  1E19 A;  4NDQ A;  1YBD A;  3LL9 A;  3AB4 A;  3K4O A;  2BRI A;  2J4K A;  3ZZF A;  3L76 A;  4NDP A;  3QUN A;  2BRX A;  3S6K A;  2V4Y A;  4F6T A;  2AP9 A;  2J0W A;  4KZT A;  3TVI A;  4AXS A;  3C1M A;  2J5V A;  3S6G A;  4A7X A;  3QUO A;  2JJX A;  2WE4 A;  2IJ9 A;  3WWN A;  2BUF A;  4A7W A;  2V5H A;  3ZZG A;  1OHB A;  3AB2 A;  4JZ8 A;  2BND A;  2A1F A;  3ZZI A;  3ZZH A;  2BTY A;  2HMF A;  4AB7 A;  3S6H A;  2CDQ A;  3QVF A;  3L86 A;  3LL5 A;  2R8V A;  2J0X A;  2E9Y A;  2BMU A;  4NDR B;  4OLC A;  4NDP B;  1GS5 A;  2VA1 A;  4I49 A;  3LKK A;  3C1N A;  4JZ9 A;  3K52 A;  4NDO B;  2JJ4 A;  2WXB A; 
#chains in the Genus database with same CATH topology
 3K4Y A;  3EK6 A;  1GSJ A;  3C20 A;  4Q1T A;  1Z9D A;  1OHA A;  2BNF A;  2OGX B;  4JZ7 A;  4USJ A;  2RD5 A;  2WE5 A;  3U6U A;  4NDQ B;  2BNE A;  3B8G A;  4NDR A;  2J5T A;  3T7B A;  2JI5 A;  3AAW A;  2J4J A;  2X2W A;  4NDO A;  3KZF A;  3D40 A;  3D41 A;  2R98 A;  4F6T B;  3K56 A;  1B7B A;  3QUR A;  3D2M A;  2J4L A;  3WWM A;  3EK5 A;  2AKO A;  3D2P A;  3QVH A;  2OGX A;  2W21 A;  3NWY A;  1OH9 A;  1E19 A;  4NDQ A;  1YBD A;  3LL9 A;  3AB4 A;  3K4O A;  2BRI A;  2J4K A;  3ZZF A;  3L76 A;  4NDP A;  3QUN A;  2BRX A;  3S6K A;  2V4Y A;  4F6T A;  2AP9 A;  2J0W A;  4KZT A;  3TVI A;  4AXS A;  3C1M A;  2J5V A;  3S6G A;  4A7X A;  3QUO A;  2JJX A;  2WE4 A;  2IJ9 A;  3WWN A;  2BUF A;  4A7W A;  2V5H A;  3ZZG A;  1OHB A;  3AB2 A;  4JZ8 A;  2BND A;  2A1F A;  3ZZI A;  3ZZH A;  2BTY A;  2HMF A;  4AB7 A;  3S6H A;  2CDQ A;  3QVF A;  3L86 A;  3LL5 A;  2R8V A;  2J0X A;  2E9Y A;  2BMU A;  4NDR B;  4OLC A;  4NDP B;  1GS5 A;  2VA1 A;  4I49 A;  3LKK A;  3C1N A;  4JZ9 A;  3K52 A;  4NDO B;  2JJ4 A;  2WXB A; 
#chains in the Genus database with same CATH homology
 3K4Y A;  3EK6 A;  1GSJ A;  3C20 A;  4Q1T A;  1Z9D A;  1OHA A;  2BNF A;  2OGX B;  4JZ7 A;  4USJ A;  2RD5 A;  2WE5 A;  3U6U A;  4NDQ B;  2BNE A;  3B8G A;  4NDR A;  2J5T A;  3T7B A;  2JI5 A;  3AAW A;  2J4J A;  2X2W A;  4NDO A;  3KZF A;  3D40 A;  3D41 A;  2R98 A;  4F6T B;  3K56 A;  1B7B A;  3QUR A;  3D2M A;  2J4L A;  3WWM A;  3EK5 A;  2AKO A;  3D2P A;  3QVH A;  2OGX A;  2W21 A;  3NWY A;  1OH9 A;  1E19 A;  4NDQ A;  1YBD A;  3LL9 A;  3AB4 A;  3K4O A;  2BRI A;  2J4K A;  3ZZF A;  3L76 A;  4NDP A;  3QUN A;  2BRX A;  3S6K A;  2V4Y A;  4F6T A;  2AP9 A;  2J0W A;  4KZT A;  3TVI A;  4AXS A;  3C1M A;  2J5V A;  3S6G A;  4A7X A;  3QUO A;  2JJX A;  2WE4 A;  2IJ9 A;  3WWN A;  2BUF A;  4A7W A;  2V5H A;  3ZZG A;  1OHB A;  3AB2 A;  4JZ8 A;  2BND A;  2A1F A;  3ZZI A;  3ZZH A;  2BTY A;  2HMF A;  4AB7 A;  3S6H A;  2CDQ A;  3QVF A;  3L86 A;  3LL5 A;  2R8V A;  2J0X A;  2E9Y A;  2BMU A;  4NDR B;  4OLC A;  4NDP B;  1GS5 A;  2VA1 A;  4I49 A;  3LKK A;  3C1N A;  4JZ9 A;  3K52 A;  4NDO B;  2JJ4 A;  2WXB A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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