2BUFA

Arginine feed-back inhibitable acetylglutamate kinase
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
300
structure length
292
Chain Sequence
TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKRH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE
molecule tags Transferase
source organism Pseudomonas aeruginosa
total genus 88
structure length 292
sequence length 300
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2bufA00
2AKOA 1YBDA 3AB4A 4F6TB 4AXSA 3C20A 3AAWA 3D2PA 3EK6A 2BNFA 2BUFA 3ZZIA 1OHAA 4A7WA 3QURA 4I49A 3S6KA 2R98A 4NDOB 3ZZHA 4A7XA 2OGXB 4NDRB 2A1FA 2HMFA 2J4KA 2V5HA 3WWNA 2BRIA 2WE4A 3U6UA 2J0WA 1GSJA 2E9YA 4Q1TA 3QVHA 2J5TA 4JZ8A 3AB2A 2R8VA 2W21A 3KZFA 2BMUA 4JZ7A 3NWYA 3B8GA 1OH9A 2J0XA 2AP9A 2IJ9A 2BNEA 3D40A 2BRXA 3L76A 2VA1A 3S6GA 4NDPA 3K52A 4USJA 2RD5A 1OHBA 3T7BA 4JZ9A 2X2WA 4AB7A 3S6HA 3ZZFA 1GS5A 2JJXA 3K4YA 3TVIA 2WE5A 3EK5A 2BTYA 4KZTA 4NDQA 3C1NA 3C1MA 2CDQA 4F6TA 3L86A 3WWMA 2J5VA 4NDPB 3K4OA 2JJ4A 3ZZGA 3QUNA 3LKKA 4NDOA 2WXBA 3D2MA 2JI5A 3D41A 2OGXA 4NDRA 1Z9DA 3QUOA 3QVFA 1B7BA 3K56A 3LL9A 3LL5A 2J4JA 2BNDA 2J4LA 4OLCA 1E19A 2V4YA 4NDQB
chains in the Genus database with same CATH superfamily
2AKOA 1YBDA 3AB4A 4F6TB 4AXSA 3C20A 3AAWA 3D2PA 3EK6A 2BNFA 2BUFA 3ZZIA 1OHAA 4A7WA 3QURA 4I49A 3S6KA 2R98A 4NDOB 3ZZHA 4A7XA 2OGXB 4NDRB 2A1FA 2HMFA 2J4KA 2V5HA 3WWNA 2BRIA 2WE4A 3U6UA 2J0WA 1GSJA 2E9YA 4Q1TA 3QVHA 2J5TA 4JZ8A 3AB2A 2R8VA 2W21A 3KZFA 2BMUA 4JZ7A 3NWYA 3B8GA 1OH9A 2J0XA 2AP9A 2IJ9A 2BNEA 3D40A 2BRXA 3L76A 2VA1A 3S6GA 4NDPA 3K52A 4USJA 2RD5A 1OHBA 3T7BA 4JZ9A 2X2WA 4AB7A 3S6HA 3ZZFA 1GS5A 2JJXA 3K4YA 3TVIA 2WE5A 3EK5A 2BTYA 4KZTA 4NDQA 3C1NA 3C1MA 2CDQA 4F6TA 3L86A 3WWMA 2J5VA 4NDPB 3K4OA 2JJ4A 3ZZGA 3QUNA 3LKKA 4NDOA 2WXBA 3D2MA 2JI5A 3D41A 2OGXA 4NDRA 1Z9DA 3QUOA 3QVFA 1B7BA 3K56A 3LL9A 3LL5A 2J4JA 2BNDA 2J4LA 4OLCA 1E19A 2V4YA 4NDQB
chains in the Genus database with same CATH topology
2AKOA 1YBDA 3AB4A 4F6TB 4AXSA 3C20A 3AAWA 3D2PA 3EK6A 2BNFA 2BUFA 3ZZIA 1OHAA 4A7WA 3QURA 4I49A 3S6KA 2R98A 4NDOB 3ZZHA 4A7XA 2OGXB 4NDRB 2A1FA 2HMFA 2J4KA 2V5HA 3WWNA 2BRIA 2WE4A 3U6UA 2J0WA 1GSJA 2E9YA 4Q1TA 3QVHA 2J5TA 4JZ8A 3AB2A 2R8VA 2W21A 3KZFA 2BMUA 4JZ7A 3NWYA 3B8GA 1OH9A 2J0XA 2AP9A 2IJ9A 2BNEA 3D40A 2BRXA 3L76A 2VA1A 3S6GA 4NDPA 3K52A 4USJA 2RD5A 1OHBA 3T7BA 4JZ9A 2X2WA 4AB7A 3S6HA 3ZZFA 1GS5A 2JJXA 3K4YA 3TVIA 2WE5A 3EK5A 2BTYA 4KZTA 4NDQA 3C1NA 3C1MA 2CDQA 4F6TA 3L86A 3WWMA 2J5VA 4NDPB 3K4OA 2JJ4A 3ZZGA 3QUNA 3LKKA 4NDOA 2WXBA 3D2MA 2JI5A 3D41A 2OGXA 4NDRA 1Z9DA 3QUOA 3QVFA 1B7BA 3K56A 3LL9A 3LL5A 2J4JA 2BNDA 2J4LA 4OLCA 1E19A 2V4YA 4NDQB
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2AKO A;  1YBD A;  3AB4 A;  4F6T B;  4AXS A;  3C20 A;  3AAW A;  3D2P A;  3EK6 A;  2BNF A;  2BUF A;  3ZZI A;  1OHA A;  4A7W A;  3QUR A;  4I49 A;  3S6K A;  2R98 A;  4NDO B;  3ZZH A;  4A7X A;  2OGX B;  4NDR B;  2A1F A;  2HMF A;  2J4K A;  2V5H A;  3WWN A;  2BRI A;  2WE4 A;  3U6U A;  2J0W A;  1GSJ A;  2E9Y A;  4Q1T A;  3QVH A;  2J5T A;  4JZ8 A;  3AB2 A;  2R8V A;  2W21 A;  3KZF A;  2BMU A;  4JZ7 A;  3NWY A;  3B8G A;  1OH9 A;  2J0X A;  2AP9 A;  2IJ9 A;  2BNE A;  3D40 A;  2BRX A;  3L76 A;  2VA1 A;  3S6G A;  4NDP A;  3K52 A;  4USJ A;  2RD5 A;  1OHB A;  3T7B A;  4JZ9 A;  2X2W A;  4AB7 A;  3S6H A;  3ZZF A;  1GS5 A;  2JJX A;  3K4Y A;  3TVI A;  2WE5 A;  3EK5 A;  2BTY A;  4KZT A;  4NDQ A;  3C1N A;  3C1M A;  2CDQ A;  4F6T A;  3L86 A;  3WWM A;  2J5V A;  4NDP B;  3K4O A;  2JJ4 A;  3ZZG A;  3QUN A;  3LKK A;  4NDO A;  2WXB A;  3D2M A;  2JI5 A;  3D41 A;  2OGX A;  4NDR A;  1Z9D A;  3QUO A;  3QVF A;  1B7B A;  3K56 A;  3LL9 A;  3LL5 A;  2J4J A;  2BND A;  2J4L A;  4OLC A;  1E19 A;  2V4Y A;  4NDQ B; 
#chains in the Genus database with same CATH topology
 2AKO A;  1YBD A;  3AB4 A;  4F6T B;  4AXS A;  3C20 A;  3AAW A;  3D2P A;  3EK6 A;  2BNF A;  2BUF A;  3ZZI A;  1OHA A;  4A7W A;  3QUR A;  4I49 A;  3S6K A;  2R98 A;  4NDO B;  3ZZH A;  4A7X A;  2OGX B;  4NDR B;  2A1F A;  2HMF A;  2J4K A;  2V5H A;  3WWN A;  2BRI A;  2WE4 A;  3U6U A;  2J0W A;  1GSJ A;  2E9Y A;  4Q1T A;  3QVH A;  2J5T A;  4JZ8 A;  3AB2 A;  2R8V A;  2W21 A;  3KZF A;  2BMU A;  4JZ7 A;  3NWY A;  3B8G A;  1OH9 A;  2J0X A;  2AP9 A;  2IJ9 A;  2BNE A;  3D40 A;  2BRX A;  3L76 A;  2VA1 A;  3S6G A;  4NDP A;  3K52 A;  4USJ A;  2RD5 A;  1OHB A;  3T7B A;  4JZ9 A;  2X2W A;  4AB7 A;  3S6H A;  3ZZF A;  1GS5 A;  2JJX A;  3K4Y A;  3TVI A;  2WE5 A;  3EK5 A;  2BTY A;  4KZT A;  4NDQ A;  3C1N A;  3C1M A;  2CDQ A;  4F6T A;  3L86 A;  3WWM A;  2J5V A;  4NDP B;  3K4O A;  2JJ4 A;  3ZZG A;  3QUN A;  3LKK A;  4NDO A;  2WXB A;  3D2M A;  2JI5 A;  3D41 A;  2OGX A;  4NDR A;  1Z9D A;  3QUO A;  3QVF A;  1B7B A;  3K56 A;  3LL9 A;  3LL5 A;  2J4J A;  2BND A;  2J4L A;  4OLC A;  1E19 A;  2V4Y A;  4NDQ B; 
#chains in the Genus database with same CATH homology
 2AKO A;  1YBD A;  3AB4 A;  4F6T B;  4AXS A;  3C20 A;  3AAW A;  3D2P A;  3EK6 A;  2BNF A;  2BUF A;  3ZZI A;  1OHA A;  4A7W A;  3QUR A;  4I49 A;  3S6K A;  2R98 A;  4NDO B;  3ZZH A;  4A7X A;  2OGX B;  4NDR B;  2A1F A;  2HMF A;  2J4K A;  2V5H A;  3WWN A;  2BRI A;  2WE4 A;  3U6U A;  2J0W A;  1GSJ A;  2E9Y A;  4Q1T A;  3QVH A;  2J5T A;  4JZ8 A;  3AB2 A;  2R8V A;  2W21 A;  3KZF A;  2BMU A;  4JZ7 A;  3NWY A;  3B8G A;  1OH9 A;  2J0X A;  2AP9 A;  2IJ9 A;  2BNE A;  3D40 A;  2BRX A;  3L76 A;  2VA1 A;  3S6G A;  4NDP A;  3K52 A;  4USJ A;  2RD5 A;  1OHB A;  3T7B A;  4JZ9 A;  2X2W A;  4AB7 A;  3S6H A;  3ZZF A;  1GS5 A;  2JJX A;  3K4Y A;  3TVI A;  2WE5 A;  3EK5 A;  2BTY A;  4KZT A;  4NDQ A;  3C1N A;  3C1M A;  2CDQ A;  4F6T A;  3L86 A;  3WWM A;  2J5V A;  4NDP B;  3K4O A;  2JJ4 A;  3ZZG A;  3QUN A;  3LKK A;  4NDO A;  2WXB A;  3D2M A;  2JI5 A;  3D41 A;  2OGX A;  4NDR A;  1Z9D A;  3QUO A;  3QVF A;  1B7B A;  3K56 A;  3LL9 A;  3LL5 A;  2J4J A;  2BND A;  2J4L A;  4OLC A;  1E19 A;  2V4Y A;  4NDQ B;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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