3ZZHA

Crystal structure of the amino acid kinase domain from saccharomyces cerevisiae acetylglutamate kinase in complex with its feed- back inhibitor l-arginine
Total Genus 98
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
98
sequence length
291
structure length
291
Chain Sequence
NGFSATRSTVIQLLNNISTKREVEQYLKYFTSVSQQQFAVIKVGGAIISDNLHELASCLAFLYHVGLYPIVLHGTGPQVNGRLEAQGIEPDYIDGIRITDEHTMAVVRKCFLEQNLKLVTALEQLGVRARPITSGVFTADYLDKDKYKLVGNIKSVTKEPIEASIKAGALPILTSLAETASGQMLNVNADVAAGELARVFEPLKIVYLNEKGGIINGSTGEKISMINLDEEYDDLMKQSWVKYGTKLKIREIKELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRGY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
pubmed doi rcsb
molecule tags Transferase
source organism Saccharomyces cerevisiae
molecule keywords ACETYLGLUTAMATE KINASE
total genus 98
structure length 291
sequence length 291
chains with identical sequence B, C, D
ec nomenclature ec 1.2.1.38: N-acetyl-gamma-glutamyl-phosphate reductase.
pdb deposition date 2011-09-01

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3zzhA00
4JZ8A 3EK5A 3D40A 3K4YA 2HMFA 4KZTA 2BMUA 1E19A 2J0XA 2J0WA 2WE5A 3LKKA 3C1MA 2BNDA 4I49A 3ZZGA 1GSJA 1OH9A 3AB4A 1YBDA 2BNEA 3B8GA 3K52A 1GS5A 2WXBA 3ZZIA 3NWYA 2BRXA 2E9YA 1B7BA 3QUNA 2BUFA 3QURA 2J4LA 4JZ9A 4NDPA 2OGXA 4F6TA 4USJA 2J5TA 3WWMA 3EK6A 2A1FA 3C20A 4AXSA 1OHBA 4NDRA 3K56A 2V4YA 2V5HA 3L76A 2VA1A 2X2WA 2IJ9A 2J4KA 2J5VA 4JZ7A 3WWNA 2OGXB 3AAWA 4A7XA 4NDQA 3S6GA 2W21A 2J4JA 3AB2A 3LL5A 2JJXA 2RD5A 3KZFA 2WE4A 2AKOA 2CDQA 2JJ4A 4OLCA 2R8VA 3ZZFA 3D2PA 3S6HA 1OHAA 2R98A 3T7BA 2BRIA 4A7WA 3L86A 4NDOA 3C1NA 3TVIA 2BTYA 4NDPB 3LL9A 4F6TB 2BNFA 2AP9A 1Z9DA 3QVFA 2JI5A 3QUOA 4Q1TA 4NDRB 3S6KA 3D2MA 3K4OA 3QVHA 4NDOB 4AB7A 3U6UA 3ZZHA 4NDQB 3D41A
chains in the Genus database with same CATH superfamily
4JZ8A 3EK5A 3D40A 3K4YA 2HMFA 4KZTA 2BMUA 1E19A 2J0XA 2J0WA 2WE5A 3LKKA 3C1MA 2BNDA 4I49A 3ZZGA 1GSJA 1OH9A 3AB4A 1YBDA 2BNEA 3B8GA 3K52A 1GS5A 2WXBA 3ZZIA 3NWYA 2BRXA 2E9YA 1B7BA 3QUNA 2BUFA 3QURA 2J4LA 4JZ9A 4NDPA 2OGXA 4F6TA 4USJA 2J5TA 3WWMA 3EK6A 2A1FA 3C20A 4AXSA 1OHBA 4NDRA 3K56A 2V4YA 2V5HA 3L76A 2VA1A 2X2WA 2IJ9A 2J4KA 2J5VA 4JZ7A 3WWNA 2OGXB 3AAWA 4A7XA 4NDQA 3S6GA 2W21A 2J4JA 3AB2A 3LL5A 2JJXA 2RD5A 3KZFA 2WE4A 2AKOA 2CDQA 2JJ4A 4OLCA 2R8VA 3ZZFA 3D2PA 3S6HA 1OHAA 2R98A 3T7BA 2BRIA 4A7WA 3L86A 4NDOA 3C1NA 3TVIA 2BTYA 4NDPB 3LL9A 4F6TB 2BNFA 2AP9A 1Z9DA 3QVFA 2JI5A 3QUOA 4Q1TA 4NDRB 3S6KA 3D2MA 3K4OA 3QVHA 4NDOB 4AB7A 3U6UA 3ZZHA 4NDQB 3D41A
chains in the Genus database with same CATH topology
4JZ8A 3EK5A 3D40A 3K4YA 2HMFA 4KZTA 2BMUA 1E19A 2J0XA 2J0WA 2WE5A 3LKKA 3C1MA 2BNDA 4I49A 3ZZGA 1GSJA 1OH9A 3AB4A 1YBDA 2BNEA 3B8GA 3K52A 1GS5A 2WXBA 3ZZIA 3NWYA 2BRXA 2E9YA 1B7BA 3QUNA 2BUFA 3QURA 2J4LA 4JZ9A 4NDPA 2OGXA 4F6TA 4USJA 2J5TA 3WWMA 3EK6A 2A1FA 3C20A 4AXSA 1OHBA 4NDRA 3K56A 2V4YA 2V5HA 3L76A 2VA1A 2X2WA 2IJ9A 2J4KA 2J5VA 4JZ7A 3WWNA 2OGXB 3AAWA 4A7XA 4NDQA 3S6GA 2W21A 2J4JA 3AB2A 3LL5A 2JJXA 2RD5A 3KZFA 2WE4A 2AKOA 2CDQA 2JJ4A 4OLCA 2R8VA 3ZZFA 3D2PA 3S6HA 1OHAA 2R98A 3T7BA 2BRIA 4A7WA 3L86A 4NDOA 3C1NA 3TVIA 2BTYA 4NDPB 3LL9A 4F6TB 2BNFA 2AP9A 1Z9DA 3QVFA 2JI5A 3QUOA 4Q1TA 4NDRB 3S6KA 3D2MA 3K4OA 3QVHA 4NDOB 4AB7A 3U6UA 3ZZHA 4NDQB 3D41A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JZ8 A;  3EK5 A;  3D40 A;  3K4Y A;  2HMF A;  4KZT A;  2BMU A;  1E19 A;  2J0X A;  2J0W A;  2WE5 A;  3LKK A;  3C1M A;  2BND A;  4I49 A;  3ZZG A;  1GSJ A;  1OH9 A;  3AB4 A;  1YBD A;  2BNE A;  3B8G A;  3K52 A;  1GS5 A;  2WXB A;  3ZZI A;  3NWY A;  2BRX A;  2E9Y A;  1B7B A;  3QUN A;  2BUF A;  3QUR A;  2J4L A;  4JZ9 A;  4NDP A;  2OGX A;  4F6T A;  4USJ A;  2J5T A;  3WWM A;  3EK6 A;  2A1F A;  3C20 A;  4AXS A;  1OHB A;  4NDR A;  3K56 A;  2V4Y A;  2V5H A;  3L76 A;  2VA1 A;  2X2W A;  2IJ9 A;  2J4K A;  2J5V A;  4JZ7 A;  3WWN A;  2OGX B;  3AAW A;  4A7X A;  4NDQ A;  3S6G A;  2W21 A;  2J4J A;  3AB2 A;  3LL5 A;  2JJX A;  2RD5 A;  3KZF A;  2WE4 A;  2AKO A;  2CDQ A;  2JJ4 A;  4OLC A;  2R8V A;  3ZZF A;  3D2P A;  3S6H A;  1OHA A;  2R98 A;  3T7B A;  2BRI A;  4A7W A;  3L86 A;  4NDO A;  3C1N A;  3TVI A;  2BTY A;  4NDP B;  3LL9 A;  4F6T B;  2BNF A;  2AP9 A;  1Z9D A;  3QVF A;  2JI5 A;  3QUO A;  4Q1T A;  4NDR B;  3S6K A;  3D2M A;  3K4O A;  3QVH A;  4NDO B;  4AB7 A;  3U6U A;  3ZZH A;  4NDQ B;  3D41 A; 
#chains in the Genus database with same CATH topology
 4JZ8 A;  3EK5 A;  3D40 A;  3K4Y A;  2HMF A;  4KZT A;  2BMU A;  1E19 A;  2J0X A;  2J0W A;  2WE5 A;  3LKK A;  3C1M A;  2BND A;  4I49 A;  3ZZG A;  1GSJ A;  1OH9 A;  3AB4 A;  1YBD A;  2BNE A;  3B8G A;  3K52 A;  1GS5 A;  2WXB A;  3ZZI A;  3NWY A;  2BRX A;  2E9Y A;  1B7B A;  3QUN A;  2BUF A;  3QUR A;  2J4L A;  4JZ9 A;  4NDP A;  2OGX A;  4F6T A;  4USJ A;  2J5T A;  3WWM A;  3EK6 A;  2A1F A;  3C20 A;  4AXS A;  1OHB A;  4NDR A;  3K56 A;  2V4Y A;  2V5H A;  3L76 A;  2VA1 A;  2X2W A;  2IJ9 A;  2J4K A;  2J5V A;  4JZ7 A;  3WWN A;  2OGX B;  3AAW A;  4A7X A;  4NDQ A;  3S6G A;  2W21 A;  2J4J A;  3AB2 A;  3LL5 A;  2JJX A;  2RD5 A;  3KZF A;  2WE4 A;  2AKO A;  2CDQ A;  2JJ4 A;  4OLC A;  2R8V A;  3ZZF A;  3D2P A;  3S6H A;  1OHA A;  2R98 A;  3T7B A;  2BRI A;  4A7W A;  3L86 A;  4NDO A;  3C1N A;  3TVI A;  2BTY A;  4NDP B;  3LL9 A;  4F6T B;  2BNF A;  2AP9 A;  1Z9D A;  3QVF A;  2JI5 A;  3QUO A;  4Q1T A;  4NDR B;  3S6K A;  3D2M A;  3K4O A;  3QVH A;  4NDO B;  4AB7 A;  3U6U A;  3ZZH A;  4NDQ B;  3D41 A; 
#chains in the Genus database with same CATH homology
 4JZ8 A;  3EK5 A;  3D40 A;  3K4Y A;  2HMF A;  4KZT A;  2BMU A;  1E19 A;  2J0X A;  2J0W A;  2WE5 A;  3LKK A;  3C1M A;  2BND A;  4I49 A;  3ZZG A;  1GSJ A;  1OH9 A;  3AB4 A;  1YBD A;  2BNE A;  3B8G A;  3K52 A;  1GS5 A;  2WXB A;  3ZZI A;  3NWY A;  2BRX A;  2E9Y A;  1B7B A;  3QUN A;  2BUF A;  3QUR A;  2J4L A;  4JZ9 A;  4NDP A;  2OGX A;  4F6T A;  4USJ A;  2J5T A;  3WWM A;  3EK6 A;  2A1F A;  3C20 A;  4AXS A;  1OHB A;  4NDR A;  3K56 A;  2V4Y A;  2V5H A;  3L76 A;  2VA1 A;  2X2W A;  2IJ9 A;  2J4K A;  2J5V A;  4JZ7 A;  3WWN A;  2OGX B;  3AAW A;  4A7X A;  4NDQ A;  3S6G A;  2W21 A;  2J4J A;  3AB2 A;  3LL5 A;  2JJX A;  2RD5 A;  3KZF A;  2WE4 A;  2AKO A;  2CDQ A;  2JJ4 A;  4OLC A;  2R8V A;  3ZZF A;  3D2P A;  3S6H A;  1OHA A;  2R98 A;  3T7B A;  2BRI A;  4A7W A;  3L86 A;  4NDO A;  3C1N A;  3TVI A;  2BTY A;  4NDP B;  3LL9 A;  4F6T B;  2BNF A;  2AP9 A;  1Z9D A;  3QVF A;  2JI5 A;  3QUO A;  4Q1T A;  4NDR B;  3S6K A;  3D2M A;  3K4O A;  3QVH A;  4NDO B;  4AB7 A;  3U6U A;  3ZZH A;  4NDQ B;  3D41 A; 
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similar chains in the Genus database (?% sequence similarity)
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