4USJA

N-acetylglutamate kinase from arabidopsis thaliana in complex with pii from chlamydomonas reinhardtii
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
281
structure length
281
Chain Sequence
DYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
pubmed doi rcsb
molecule keywords ACETYLGLUTAMATE KINASE, CHLOROPLASTIC
molecule tags Transferase
source organism Arabidopsis thaliana
total genus 95
structure length 281
sequence length 281
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2014-07-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 4usjA00
4NDRB 3L86A 2E9YA 2AP9A 4F6TA 2A1FA 2BNEA 2J4LA 3LL5A 3TVIA 2IJ9A 2X2WA 4USJA 2JJXA 3EK6A 3B8GA 4NDOA 3L76A 2CDQA 2J0XA 3D2MA 3LKKA 4A7XA 4JZ7A 3KZFA 3ZZHA 2J4JA 3T7BA 2OGXA 2VA1A 1OH9A 2BTYA 2BUFA 2V4YA 1Z9DA 2RD5A 4NDQA 3ZZFA 1OHAA 3AAWA 4KZTA 4F6TB 1E19A 2WE4A 1B7BA 2AKOA 4NDPA 3AB2A 2WXBA 3QUOA 3U6UA 4NDOB 4NDPB 4OLCA 1OHBA 4JZ9A 2R8VA 3ZZGA 3K52A 2V5HA 2BNFA 3AB4A 1YBDA 2OGXB 2J4KA 2W21A 2WE5A 3EK5A 2J5VA 2BMUA 4NDQB 3K56A 3S6KA 3C1MA 3LL9A 4NDRA 3ZZIA 3QVFA 4AXSA 2HMFA 3S6GA 3D40A 3S6HA 3QVHA 3D41A 3WWNA 2BRXA 1GSJA 4A7WA 4I49A 2JJ4A 2JI5A 3QUNA 4AB7A 3C1NA 4Q1TA 1GS5A 2J0WA 4JZ8A 3WWMA 2BRIA 3C20A 3D2PA 2R98A 2BNDA 3K4YA 2J5TA 3QURA 3K4OA 3NWYA
chains in the Genus database with same CATH superfamily
4NDRB 3L86A 2E9YA 2AP9A 4F6TA 2A1FA 2BNEA 2J4LA 3LL5A 3TVIA 2IJ9A 2X2WA 4USJA 2JJXA 3EK6A 3B8GA 4NDOA 3L76A 2CDQA 2J0XA 3D2MA 3LKKA 4A7XA 4JZ7A 3KZFA 3ZZHA 2J4JA 3T7BA 2OGXA 2VA1A 1OH9A 2BTYA 2BUFA 2V4YA 1Z9DA 2RD5A 4NDQA 3ZZFA 1OHAA 3AAWA 4KZTA 4F6TB 1E19A 2WE4A 1B7BA 2AKOA 4NDPA 3AB2A 2WXBA 3QUOA 3U6UA 4NDOB 4NDPB 4OLCA 1OHBA 4JZ9A 2R8VA 3ZZGA 3K52A 2V5HA 2BNFA 3AB4A 1YBDA 2OGXB 2J4KA 2W21A 2WE5A 3EK5A 2J5VA 2BMUA 4NDQB 3K56A 3S6KA 3C1MA 3LL9A 4NDRA 3ZZIA 3QVFA 4AXSA 2HMFA 3S6GA 3D40A 3S6HA 3QVHA 3D41A 3WWNA 2BRXA 1GSJA 4A7WA 4I49A 2JJ4A 2JI5A 3QUNA 4AB7A 3C1NA 4Q1TA 1GS5A 2J0WA 4JZ8A 3WWMA 2BRIA 3C20A 3D2PA 2R98A 2BNDA 3K4YA 2J5TA 3QURA 3K4OA 3NWYA
chains in the Genus database with same CATH topology
4NDRB 3L86A 2E9YA 2AP9A 4F6TA 2A1FA 2BNEA 2J4LA 3LL5A 3TVIA 2IJ9A 2X2WA 4USJA 2JJXA 3EK6A 3B8GA 4NDOA 3L76A 2CDQA 2J0XA 3D2MA 3LKKA 4A7XA 4JZ7A 3KZFA 3ZZHA 2J4JA 3T7BA 2OGXA 2VA1A 1OH9A 2BTYA 2BUFA 2V4YA 1Z9DA 2RD5A 4NDQA 3ZZFA 1OHAA 3AAWA 4KZTA 4F6TB 1E19A 2WE4A 1B7BA 2AKOA 4NDPA 3AB2A 2WXBA 3QUOA 3U6UA 4NDOB 4NDPB 4OLCA 1OHBA 4JZ9A 2R8VA 3ZZGA 3K52A 2V5HA 2BNFA 3AB4A 1YBDA 2OGXB 2J4KA 2W21A 2WE5A 3EK5A 2J5VA 2BMUA 4NDQB 3K56A 3S6KA 3C1MA 3LL9A 4NDRA 3ZZIA 3QVFA 4AXSA 2HMFA 3S6GA 3D40A 3S6HA 3QVHA 3D41A 3WWNA 2BRXA 1GSJA 4A7WA 4I49A 2JJ4A 2JI5A 3QUNA 4AB7A 3C1NA 4Q1TA 1GS5A 2J0WA 4JZ8A 3WWMA 2BRIA 3C20A 3D2PA 2R98A 2BNDA 3K4YA 2J5TA 3QURA 3K4OA 3NWYA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 4NDR B;  3L86 A;  2E9Y A;  2AP9 A;  4F6T A;  2A1F A;  2BNE A;  2J4L A;  3LL5 A;  3TVI A;  2IJ9 A;  2X2W A;  4USJ A;  2JJX A;  3EK6 A;  3B8G A;  4NDO A;  3L76 A;  2CDQ A;  2J0X A;  3D2M A;  3LKK A;  4A7X A;  4JZ7 A;  3KZF A;  3ZZH A;  2J4J A;  3T7B A;  2OGX A;  2VA1 A;  1OH9 A;  2BTY A;  2BUF A;  2V4Y A;  1Z9D A;  2RD5 A;  4NDQ A;  3ZZF A;  1OHA A;  3AAW A;  4KZT A;  4F6T B;  1E19 A;  2WE4 A;  1B7B A;  2AKO A;  4NDP A;  3AB2 A;  2WXB A;  3QUO A;  3U6U A;  4NDO B;  4NDP B;  4OLC A;  1OHB A;  4JZ9 A;  2R8V A;  3ZZG A;  3K52 A;  2V5H A;  2BNF A;  3AB4 A;  1YBD A;  2OGX B;  2J4K A;  2W21 A;  2WE5 A;  3EK5 A;  2J5V A;  2BMU A;  4NDQ B;  3K56 A;  3S6K A;  3C1M A;  3LL9 A;  4NDR A;  3ZZI A;  3QVF A;  4AXS A;  2HMF A;  3S6G A;  3D40 A;  3S6H A;  3QVH A;  3D41 A;  3WWN A;  2BRX A;  1GSJ A;  4A7W A;  4I49 A;  2JJ4 A;  2JI5 A;  3QUN A;  4AB7 A;  3C1N A;  4Q1T A;  1GS5 A;  2J0W A;  4JZ8 A;  3WWM A;  2BRI A;  3C20 A;  3D2P A;  2R98 A;  2BND A;  3K4Y A;  2J5T A;  3QUR A;  3K4O A;  3NWY A; 
#chains in the Genus database with same CATH topology
 4NDR B;  3L86 A;  2E9Y A;  2AP9 A;  4F6T A;  2A1F A;  2BNE A;  2J4L A;  3LL5 A;  3TVI A;  2IJ9 A;  2X2W A;  4USJ A;  2JJX A;  3EK6 A;  3B8G A;  4NDO A;  3L76 A;  2CDQ A;  2J0X A;  3D2M A;  3LKK A;  4A7X A;  4JZ7 A;  3KZF A;  3ZZH A;  2J4J A;  3T7B A;  2OGX A;  2VA1 A;  1OH9 A;  2BTY A;  2BUF A;  2V4Y A;  1Z9D A;  2RD5 A;  4NDQ A;  3ZZF A;  1OHA A;  3AAW A;  4KZT A;  4F6T B;  1E19 A;  2WE4 A;  1B7B A;  2AKO A;  4NDP A;  3AB2 A;  2WXB A;  3QUO A;  3U6U A;  4NDO B;  4NDP B;  4OLC A;  1OHB A;  4JZ9 A;  2R8V A;  3ZZG A;  3K52 A;  2V5H A;  2BNF A;  3AB4 A;  1YBD A;  2OGX B;  2J4K A;  2W21 A;  2WE5 A;  3EK5 A;  2J5V A;  2BMU A;  4NDQ B;  3K56 A;  3S6K A;  3C1M A;  3LL9 A;  4NDR A;  3ZZI A;  3QVF A;  4AXS A;  2HMF A;  3S6G A;  3D40 A;  3S6H A;  3QVH A;  3D41 A;  3WWN A;  2BRX A;  1GSJ A;  4A7W A;  4I49 A;  2JJ4 A;  2JI5 A;  3QUN A;  4AB7 A;  3C1N A;  4Q1T A;  1GS5 A;  2J0W A;  4JZ8 A;  3WWM A;  2BRI A;  3C20 A;  3D2P A;  2R98 A;  2BND A;  3K4Y A;  2J5T A;  3QUR A;  3K4O A;  3NWY A; 
#chains in the Genus database with same CATH homology
 4NDR B;  3L86 A;  2E9Y A;  2AP9 A;  4F6T A;  2A1F A;  2BNE A;  2J4L A;  3LL5 A;  3TVI A;  2IJ9 A;  2X2W A;  4USJ A;  2JJX A;  3EK6 A;  3B8G A;  4NDO A;  3L76 A;  2CDQ A;  2J0X A;  3D2M A;  3LKK A;  4A7X A;  4JZ7 A;  3KZF A;  3ZZH A;  2J4J A;  3T7B A;  2OGX A;  2VA1 A;  1OH9 A;  2BTY A;  2BUF A;  2V4Y A;  1Z9D A;  2RD5 A;  4NDQ A;  3ZZF A;  1OHA A;  3AAW A;  4KZT A;  4F6T B;  1E19 A;  2WE4 A;  1B7B A;  2AKO A;  4NDP A;  3AB2 A;  2WXB A;  3QUO A;  3U6U A;  4NDO B;  4NDP B;  4OLC A;  1OHB A;  4JZ9 A;  2R8V A;  3ZZG A;  3K52 A;  2V5H A;  2BNF A;  3AB4 A;  1YBD A;  2OGX B;  2J4K A;  2W21 A;  2WE5 A;  3EK5 A;  2J5V A;  2BMU A;  4NDQ B;  3K56 A;  3S6K A;  3C1M A;  3LL9 A;  4NDR A;  3ZZI A;  3QVF A;  4AXS A;  2HMF A;  3S6G A;  3D40 A;  3S6H A;  3QVH A;  3D41 A;  3WWN A;  2BRX A;  1GSJ A;  4A7W A;  4I49 A;  2JJ4 A;  2JI5 A;  3QUN A;  4AB7 A;  3C1N A;  4Q1T A;  1GS5 A;  2J0W A;  4JZ8 A;  3WWM A;  2BRI A;  3C20 A;  3D2P A;  2R98 A;  2BND A;  3K4Y A;  2J5T A;  3QUR A;  3K4O A;  3NWY A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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