4USJA

N-acetylglutamate kinase from arabidopsis thaliana in complex with pii from chlamydomonas reinhardtii
Total Genus 95
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
95
sequence length
281
structure length
281
Chain Sequence
DYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title A Widespread Glutamine-Sensing Mechanism in the Plant Kingdom.
pubmed doi rcsb
molecule tags Transferase
source organism Arabidopsis thaliana
molecule keywords ACETYLGLUTAMATE KINASE, CHLOROPLASTIC
total genus 95
structure length 281
sequence length 281
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2014-07-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 4usjA00
1Z9DA 4F6TA 4USJA 2J0XA 2OGXB 1B7BA 3C1NA 4A7XA 3LL5A 2A1FA 2BNFA 1GS5A 2AKOA 4JZ8A 3LL9A 4NDPB 3K4OA 2BNEA 4F6TB 4AXSA 2OGXA 4Q1TA 3T7BA 1YBDA 4NDRB 1OHAA 3D2PA 2CDQA 2VA1A 2RD5A 4KZTA 1OHBA 3C20A 3K4YA 3NWYA 4NDPA 3EK6A 2V5HA 2R98A 3ZZHA 3D2MA 4AB7A 1E19A 4NDRA 3EK5A 3K56A 2J4LA 3KZFA 3LKKA 1GSJA 3D41A 4JZ9A 2J5TA 2W21A 3K52A 4OLCA 3AAWA 3QVFA 3AB2A 3L86A 2BRIA 2JJXA 2BNDA 3S6HA 2JJ4A 3B8GA 3QVHA 4NDOB 3WWMA 3WWNA 2R8VA 3TVIA 2BTYA 3ZZFA 2JI5A 4JZ7A 2WE4A 3QURA 2X2WA 2IJ9A 3L76A 2V4YA 3C1MA 2J4JA 2AP9A 2J4KA 3U6UA 3ZZIA 2J0WA 4NDOA 3QUNA 2BRXA 2BUFA 3S6GA 4NDQA 2BMUA 2E9YA 2HMFA 4I49A 3ZZGA 4A7WA 2WE5A 3S6KA 3D40A 4NDQB 2WXBA 3AB4A 1OH9A 2J5VA 3QUOA
chains in the Genus database with same CATH superfamily
1Z9DA 4F6TA 4USJA 2J0XA 2OGXB 1B7BA 3C1NA 4A7XA 3LL5A 2A1FA 2BNFA 1GS5A 2AKOA 4JZ8A 3LL9A 4NDPB 3K4OA 2BNEA 4F6TB 4AXSA 2OGXA 4Q1TA 3T7BA 1YBDA 4NDRB 1OHAA 3D2PA 2CDQA 2VA1A 2RD5A 4KZTA 1OHBA 3C20A 3K4YA 3NWYA 4NDPA 3EK6A 2V5HA 2R98A 3ZZHA 3D2MA 4AB7A 1E19A 4NDRA 3EK5A 3K56A 2J4LA 3KZFA 3LKKA 1GSJA 3D41A 4JZ9A 2J5TA 2W21A 3K52A 4OLCA 3AAWA 3QVFA 3AB2A 3L86A 2BRIA 2JJXA 2BNDA 3S6HA 2JJ4A 3B8GA 3QVHA 4NDOB 3WWMA 3WWNA 2R8VA 3TVIA 2BTYA 3ZZFA 2JI5A 4JZ7A 2WE4A 3QURA 2X2WA 2IJ9A 3L76A 2V4YA 3C1MA 2J4JA 2AP9A 2J4KA 3U6UA 3ZZIA 2J0WA 4NDOA 3QUNA 2BRXA 2BUFA 3S6GA 4NDQA 2BMUA 2E9YA 2HMFA 4I49A 3ZZGA 4A7WA 2WE5A 3S6KA 3D40A 4NDQB 2WXBA 3AB4A 1OH9A 2J5VA 3QUOA
chains in the Genus database with same CATH topology
1Z9DA 4F6TA 4USJA 2J0XA 2OGXB 1B7BA 3C1NA 4A7XA 3LL5A 2A1FA 2BNFA 1GS5A 2AKOA 4JZ8A 3LL9A 4NDPB 3K4OA 2BNEA 4F6TB 4AXSA 2OGXA 4Q1TA 3T7BA 1YBDA 4NDRB 1OHAA 3D2PA 2CDQA 2VA1A 2RD5A 4KZTA 1OHBA 3C20A 3K4YA 3NWYA 4NDPA 3EK6A 2V5HA 2R98A 3ZZHA 3D2MA 4AB7A 1E19A 4NDRA 3EK5A 3K56A 2J4LA 3KZFA 3LKKA 1GSJA 3D41A 4JZ9A 2J5TA 2W21A 3K52A 4OLCA 3AAWA 3QVFA 3AB2A 3L86A 2BRIA 2JJXA 2BNDA 3S6HA 2JJ4A 3B8GA 3QVHA 4NDOB 3WWMA 3WWNA 2R8VA 3TVIA 2BTYA 3ZZFA 2JI5A 4JZ7A 2WE4A 3QURA 2X2WA 2IJ9A 3L76A 2V4YA 3C1MA 2J4JA 2AP9A 2J4KA 3U6UA 3ZZIA 2J0WA 4NDOA 3QUNA 2BRXA 2BUFA 3S6GA 4NDQA 2BMUA 2E9YA 2HMFA 4I49A 3ZZGA 4A7WA 2WE5A 3S6KA 3D40A 4NDQB 2WXBA 3AB4A 1OH9A 2J5VA 3QUOA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1Z9D A;  4F6T A;  4USJ A;  2J0X A;  2OGX B;  1B7B A;  3C1N A;  4A7X A;  3LL5 A;  2A1F A;  2BNF A;  1GS5 A;  2AKO A;  4JZ8 A;  3LL9 A;  4NDP B;  3K4O A;  2BNE A;  4F6T B;  4AXS A;  2OGX A;  4Q1T A;  3T7B A;  1YBD A;  4NDR B;  1OHA A;  3D2P A;  2CDQ A;  2VA1 A;  2RD5 A;  4KZT A;  1OHB A;  3C20 A;  3K4Y A;  3NWY A;  4NDP A;  3EK6 A;  2V5H A;  2R98 A;  3ZZH A;  3D2M A;  4AB7 A;  1E19 A;  4NDR A;  3EK5 A;  3K56 A;  2J4L A;  3KZF A;  3LKK A;  1GSJ A;  3D41 A;  4JZ9 A;  2J5T A;  2W21 A;  3K52 A;  4OLC A;  3AAW A;  3QVF A;  3AB2 A;  3L86 A;  2BRI A;  2JJX A;  2BND A;  3S6H A;  2JJ4 A;  3B8G A;  3QVH A;  4NDO B;  3WWM A;  3WWN A;  2R8V A;  3TVI A;  2BTY A;  3ZZF A;  2JI5 A;  4JZ7 A;  2WE4 A;  3QUR A;  2X2W A;  2IJ9 A;  3L76 A;  2V4Y A;  3C1M A;  2J4J A;  2AP9 A;  2J4K A;  3U6U A;  3ZZI A;  2J0W A;  4NDO A;  3QUN A;  2BRX A;  2BUF A;  3S6G A;  4NDQ A;  2BMU A;  2E9Y A;  2HMF A;  4I49 A;  3ZZG A;  4A7W A;  2WE5 A;  3S6K A;  3D40 A;  4NDQ B;  2WXB A;  3AB4 A;  1OH9 A;  2J5V A;  3QUO A; 
#chains in the Genus database with same CATH topology
 1Z9D A;  4F6T A;  4USJ A;  2J0X A;  2OGX B;  1B7B A;  3C1N A;  4A7X A;  3LL5 A;  2A1F A;  2BNF A;  1GS5 A;  2AKO A;  4JZ8 A;  3LL9 A;  4NDP B;  3K4O A;  2BNE A;  4F6T B;  4AXS A;  2OGX A;  4Q1T A;  3T7B A;  1YBD A;  4NDR B;  1OHA A;  3D2P A;  2CDQ A;  2VA1 A;  2RD5 A;  4KZT A;  1OHB A;  3C20 A;  3K4Y A;  3NWY A;  4NDP A;  3EK6 A;  2V5H A;  2R98 A;  3ZZH A;  3D2M A;  4AB7 A;  1E19 A;  4NDR A;  3EK5 A;  3K56 A;  2J4L A;  3KZF A;  3LKK A;  1GSJ A;  3D41 A;  4JZ9 A;  2J5T A;  2W21 A;  3K52 A;  4OLC A;  3AAW A;  3QVF A;  3AB2 A;  3L86 A;  2BRI A;  2JJX A;  2BND A;  3S6H A;  2JJ4 A;  3B8G A;  3QVH A;  4NDO B;  3WWM A;  3WWN A;  2R8V A;  3TVI A;  2BTY A;  3ZZF A;  2JI5 A;  4JZ7 A;  2WE4 A;  3QUR A;  2X2W A;  2IJ9 A;  3L76 A;  2V4Y A;  3C1M A;  2J4J A;  2AP9 A;  2J4K A;  3U6U A;  3ZZI A;  2J0W A;  4NDO A;  3QUN A;  2BRX A;  2BUF A;  3S6G A;  4NDQ A;  2BMU A;  2E9Y A;  2HMF A;  4I49 A;  3ZZG A;  4A7W A;  2WE5 A;  3S6K A;  3D40 A;  4NDQ B;  2WXB A;  3AB4 A;  1OH9 A;  2J5V A;  3QUO A; 
#chains in the Genus database with same CATH homology
 1Z9D A;  4F6T A;  4USJ A;  2J0X A;  2OGX B;  1B7B A;  3C1N A;  4A7X A;  3LL5 A;  2A1F A;  2BNF A;  1GS5 A;  2AKO A;  4JZ8 A;  3LL9 A;  4NDP B;  3K4O A;  2BNE A;  4F6T B;  4AXS A;  2OGX A;  4Q1T A;  3T7B A;  1YBD A;  4NDR B;  1OHA A;  3D2P A;  2CDQ A;  2VA1 A;  2RD5 A;  4KZT A;  1OHB A;  3C20 A;  3K4Y A;  3NWY A;  4NDP A;  3EK6 A;  2V5H A;  2R98 A;  3ZZH A;  3D2M A;  4AB7 A;  1E19 A;  4NDR A;  3EK5 A;  3K56 A;  2J4L A;  3KZF A;  3LKK A;  1GSJ A;  3D41 A;  4JZ9 A;  2J5T A;  2W21 A;  3K52 A;  4OLC A;  3AAW A;  3QVF A;  3AB2 A;  3L86 A;  2BRI A;  2JJX A;  2BND A;  3S6H A;  2JJ4 A;  3B8G A;  3QVH A;  4NDO B;  3WWM A;  3WWN A;  2R8V A;  3TVI A;  2BTY A;  3ZZF A;  2JI5 A;  4JZ7 A;  2WE4 A;  3QUR A;  2X2W A;  2IJ9 A;  3L76 A;  2V4Y A;  3C1M A;  2J4J A;  2AP9 A;  2J4K A;  3U6U A;  3ZZI A;  2J0W A;  4NDO A;  3QUN A;  2BRX A;  2BUF A;  3S6G A;  4NDQ A;  2BMU A;  2E9Y A;  2HMF A;  4I49 A;  3ZZG A;  4A7W A;  2WE5 A;  3S6K A;  3D40 A;  4NDQ B;  2WXB A;  3AB4 A;  1OH9 A;  2J5V A;  3QUO A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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