2KYY | Genus

Total Genus 27

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	27
sequence length	153
structure length	153
Chain Sequence	MRSATDLLDELNAVDESARIEAKRASDMGKSVMETVIAFANEPGLDGGYLLLGVDWAINDKGDTVYRPVGLPDPDKVQRDLASQCASMLNVALRPEMQLEQVGGKTLLVVYVPEADVTHKPIYKKATGLPGGAYRRIGSSDQRCVLEHHHHHH

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase
source organism	Nitrosomonas europaea
publication title	Solution NMR Structure of the N-terminal Domain of Putative ATP-dependent DNA Helicase RecG-related Protein from Nitrosomonas europaea rcsb
molecule keywords	Possible ATP-dependent DNA helicase RecG-related protein
total genus	27
structure length	153
sequence length	153
ec nomenclature
pdb deposition date	2010-06-09

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF04326	AlbA_2	Putative DNA-binding domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.950.30	Alpha Beta	2-Layer Sandwich	Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2	Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2	2kyyA00

3LMMA 2KYYA
chains in the Genus database with same CATH superfamily

2E15A 2DXVA 2E8HA 2ELDA 2KYYA 2EGLA 2EN5A 2P6LA 2EL3A 1CBFA 2P5FA 2EJKA 2BB3A 1VA0A 2ZVCA 2E16A 2DEKA 2EL2A 1WYZA 2EJJA 2Z6RA 2ENIA 2QBUA 2PCGA 2P5CA 2DV7A 2HUVA 2EHLA 2EMRA 2OWGA 2EKAA 2DXXA 2PB5A 2EK2A 2E0NA 2ED3A 4E16A 1VE2A 5HW4A 2OWFA 1VCEA 1PJQA 2E17A 2ELEA 2EK3A 2EEQA 2P9DA 2EL0A 2EMUA 2EH4A 2E4RA 3NDCA 2P6IA 2EGBA 2PCHA 2E4NA 2P2XA 2EK7A 3ND1A 3FQ6A 2HUQA 2EH5A 2DSIA 2E8QA 2EGSA 1VHVA 2E8RA 2HUTA 1PJTA 2E08A 2ZVBA 1WNGA 2CBFA 2E7RA 2PCMA 2PCKA 2PCAA 2PB6A 3LMMA 2EHCA 1V9AA 2E07A 2E8SA 2DV4A 2DV3A 2PB4A 2EJZA 2NPNA 2HUXA 3I4TA 2EK4A 2EL1A 1S4DA 2YBOA 2DSGA 2DV5A 2P6KA 3FFYA 2YBQA 2OWVA 2P6DA 1WDEA 2DXWA 2E0KA 3NUTA 3NEIA 3KWPA 2EH2A 2DSHA 2OWKA 2HR8A 2PCIA 1PJSA 2ED5A 2OWUA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3LMM A;  2KYY A; 
#chains in the Genus database with same CATH topology
 2E15 A;  2DXV A;  2E8H A;  2ELD A;  2KYY A;  2EGL A;  2EN5 A;  2P6L A;  2EL3 A;  1CBF A;  2P5F A;  2EJK A;  2BB3 A;  1VA0 A;  2ZVC A;  2E16 A;  2DEK A;  2EL2 A;  1WYZ A;  2EJJ A;  2Z6R A;  2ENI A;  2QBU A;  2PCG A;  2P5C A;  2DV7 A;  2HUV A;  2EHL A;  2EMR A;  2OWG A;  2EKA A;  2DXX A;  2PB5 A;  2EK2 A;  2E0N A;  2ED3 A;  4E16 A;  1VE2 A;  5HW4 A;  2OWF A;  1VCE A;  1PJQ A;  2E17 A;  2ELE A;  2EK3 A;  2EEQ A;  2P9D A;  2EL0 A;  2EMU A;  2EH4 A;  2E4R A;  3NDC A;  2P6I A;  2EGB A;  2PCH A;  2E4N A;  2P2X A;  2EK7 A;  3ND1 A;  3FQ6 A;  2HUQ A;  2EH5 A;  2DSI A;  2E8Q A;  2EGS A;  1VHV A;  2E8R A;  2HUT A;  1PJT A;  2E08 A;  2ZVB A;  1WNG A;  2CBF A;  2E7R A;  2PCM A;  2PCK A;  2PCA A;  2PB6 A;  3LMM A;  2EHC A;  1V9A A;  2E07 A;  2E8S A;  2DV4 A;  2DV3 A;  2PB4 A;  2EJZ A;  2NPN A;  2HUX A;  3I4T A;  2EK4 A;  2EL1 A;  1S4D A;  2YBO A;  2DSG A;  2DV5 A;  2P6K A;  3FFY A;  2YBQ A;  2OWV A;  2P6D A;  1WDE A;  2DXW A;  2E0K A;  3NUT A;  3NEI A;  3KWP A;  2EH2 A;  2DSH A;  2OWK A;  2HR8 A;  2PCI A;  1PJS A;  2ED5 A;  2OWU A; 
#chains in the Genus database with same CATH homology
 2E15 A;  2DXV A;  2E8H A;  2ELD A;  2KYY A;  2EGL A;  2EN5 A;  2P6L A;  2EL3 A;  1CBF A;  2P5F A;  2EJK A;  2BB3 A;  1VA0 A;  2ZVC A;  2E16 A;  2DEK A;  2EL2 A;  1WYZ A;  2EJJ A;  2Z6R A;  2ENI A;  2QBU A;  2PCG A;  2P5C A;  2DV7 A;  2HUV A;  2EHL A;  2EMR A;  2OWG A;  2EKA A;  2DXX A;  2PB5 A;  2EK2 A;  2E0N A;  2ED3 A;  4E16 A;  1VE2 A;  5HW4 A;  2OWF A;  1VCE A;  1PJQ A;  2E17 A;  2ELE A;  2EK3 A;  2EEQ A;  2P9D A;  2EL0 A;  2EMU A;  2EH4 A;  2E4R A;  3NDC A;  2P6I A;  2EGB A;  2PCH A;  2E4N A;  2P2X A;  2EK7 A;  3ND1 A;  3FQ6 A;  2HUQ A;  2EH5 A;  2DSI A;  2E8Q A;  2EGS A;  1VHV A;  2E8R A;  2HUT A;  1PJT A;  2E08 A;  2ZVB A;  1WNG A;  2CBF A;  2E7R A;  2PCM A;  2PCK A;  2PCA A;  2PB6 A;  3LMM A;  2EHC A;  1V9A A;  2E07 A;  2E8S A;  2DV4 A;  2DV3 A;  2PB4 A;  2EJZ A;  2NPN A;  2HUX A;  3I4T A;  2EK4 A;  2EL1 A;  1S4D A;  2YBO A;  2DSG A;  2DV5 A;  2P6K A;  3FFY A;  2YBQ A;  2OWV A;  2P6D A;  1WDE A;  2DXW A;  2E0K A;  3NUT A;  3NEI A;  3KWP A;  2EH2 A;  2DSH A;  2OWK A;  2HR8 A;  2PCI A;  1PJS A;  2ED5 A;  2OWU A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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2KYYA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations