4E16A

Precorrin-4 c(11)-methyltransferase from clostridium difficile
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
232
structure length
229
Chain Sequence
MNKVHFVGAGPGDKELITLKGYKLLSNADVVIYAGSLVNPELLEYCKEDCQIHNSAHMDLQEIIDVMREGIENNKSVVRLQTGDFSIYGSIREQVEDLNKLNIDYDCTPGVSSFLGAASSLGVEYTVPEISQSVIITRMTPVPEKESIQSYAKHQTSMVIFLSVQEIEKVVSKLLEGGYPKDTPIAVIYKATWADEKIVKGTLSDIAVKVKENNINKTALIMVGRFLGE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords precorrin-4 C(11)-methyltransferase
publication title Precorrin-4 C(11)-methyltransferase from Clostridium difficile
rcsb
source organism Clostridium difficile
total genus 65
structure length 229
sequence length 232
ec nomenclature ec 2.1.1.-:
pdb deposition date 2012-03-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 4e16A02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 4e16A01
2EH4A 3FFYA 2E15A 1CBFA 2EL2A 5HW4A 1WYZA 3NEIA 2EMRA 2EJKA 2E4NA 2EL1A 2E8RA 2DXXA 2PCMA 2E0NA 1PJQA 2EN5A 2E0KA 2PCHA 4E16A 2P5CA 2DSHA 2EMUA 2HUVA 3FQ6A 2EH2A 2PB4A 2EJZA 2OWUA 2DXWA 2BB3A 1VCEA 2E4RA 2P6LA 1VA0A 2EH5A 2ED5A 2EHLA 2DV7A 2E8QA 2DXVA 2E17A 2EGLA 1WDEA 2EL0A 2HUTA 2DV3A 2DEKA 2HR8A 1VHVA 2Z6RA 2EEQA 2EK2A 2P6IA 1PJTA 3HH1A 2ELDA 2P2XA 2EGSA 1PJSA 2EL3A 2P6DA 1VE2A 2PCKA 2EK7A 2EK4A 2DSGA 2PCAA 2DV5A 2ELEA 2YBOA 2NPNA 2OWGA 2OWKA 2PCIA 2YBQA 1V9AA 2ZVCA 2E16A 2E8HA 2P6KA 2HUXA 2E7RA 2OWVA 2OWFA 2P5FA 2HUQA 2PB6A 2EKAA 2DV4A 2E07A 2P9DA 2E08A 2EJJA 2PCGA 2EHCA 2PB5A 2ZVBA 1S4DA 2ED3A 2E8SA 3I4TA 3KWPA 2CBFA 3NUTA 3NDCA 2ENIA 2EGBA 1WNGA 2DSIA 2EK3A 2QBUA 3ND1A
chains in the Genus database with same CATH superfamily
2EH4A 3FFYA 4N7BA 2E15A 1CBFA 2EL2A 5HW4A 3KELA 1WYZA 3NEIA 2EMRA 2EJKA 2E4NA 2EL1A 2E8RA 2DXXA 2PCMA 2E0NA 3SZUA 1PJQA 3DNFA 2EN5A 2E0KA 2PCHA 4E16A 2P5CA 2DSHA 3UV7A 2EMUA 4H4EA 2HUVA 3FQ6A 2EH2A 2PB4A 2EJZA 2OWUA 2DXWA 3UV6A 2BB3A 1VCEA 2E4RA 3UWMA 3URKA 3LMMA 3TIXB 2P6LA 1VA0A 2EH5A 2ED5A 2EHLA 2DV7A 3F7TA 2E8QA 2DXVA 4MUXA 2E17A 3T0FA 2EGLA 1WDEA 2EL0A 4H4CA 2HUTA 4EB3A 2DV3A 4MV0A 2DEKA 3UTDA 2HR8A 1VHVA 4MUYA 2Z6RA 2EEQA 2EK2A 2P6IA 1PJTA 3HH1A 2ELDA 2P2XA 2EGSA 1PJSA 3ZGLA 2EL3A 2P6DA 3ZGNA 1VE2A 2PCKA 2EK7A 3SZOA 2EK4A 2DSGA 3T0GA 2PCAA 2DV5A 2ELEA 3KE8A 3KEMA 2YBOA 2NPNA 2KYYA 2OWGA 2OWKA 2PCIA 2YBQA 1V9AA 2ZVCA 2E16A 3UTCA 2E8HA 3UV3A 2P6KA 2HUXA 2E7RA 2OWVA 2OWFA 2P5FA 2HUQA 2PB6A 2EKAA 2DV4A 2E07A 2P9DA 2E08A 2EJJA 2PCGA 2EHCA 2PB5A 3SZLA 2ZVBA 1S4DA 2ED3A 3KEFA 3KE9A 4MV5A 2E8SA 3I4TA 3KWPA 2CBFA 3NUTA 4H4DA 3NDCA 2ENIA 2EGBA 1WNGA 2DSIA 2EK3A 2QBUA 3ND1A
chains in the Genus database with same CATH topology
2EH4A 3FFYA 4N7BA 2E15A 1CBFA 2EL2A 5HW4A 3KELA 1WYZA 3NEIA 2EMRA 2EJKA 2E4NA 2EL1A 2E8RA 2DXXA 2PCMA 2E0NA 3SZUA 1PJQA 3DNFA 2EN5A 2E0KA 2PCHA 4E16A 2P5CA 2DSHA 3UV7A 2EMUA 4H4EA 2HUVA 3FQ6A 2EH2A 2PB4A 2EJZA 2OWUA 2DXWA 3UV6A 2BB3A 1VCEA 2E4RA 3UWMA 3URKA 3LMMA 3TIXB 2P6LA 1VA0A 2EH5A 2ED5A 2EHLA 2DV7A 3F7TA 2E8QA 2DXVA 4MUXA 2E17A 3T0FA 2EGLA 1WDEA 2EL0A 4H4CA 2HUTA 4EB3A 2DV3A 4MV0A 2DEKA 3UTDA 2HR8A 1VHVA 4MUYA 2Z6RA 2EEQA 2EK2A 2P6IA 1PJTA 3HH1A 2ELDA 2P2XA 2EGSA 1PJSA 3ZGLA 2EL3A 2P6DA 3ZGNA 1VE2A 2PCKA 2EK7A 3SZOA 2EK4A 2DSGA 3T0GA 2PCAA 2DV5A 2ELEA 3KE8A 3KEMA 2YBOA 2NPNA 2KYYA 2OWGA 2OWKA 2PCIA 2YBQA 1V9AA 2ZVCA 2E16A 3UTCA 2E8HA 3UV3A 2P6KA 2HUXA 2E7RA 2OWVA 2OWFA 2P5FA 2HUQA 2PB6A 2EKAA 2DV4A 2E07A 2P9DA 2E08A 2EJJA 2PCGA 2EHCA 2PB5A 3SZLA 2ZVBA 1S4DA 2ED3A 3KEFA 3KE9A 4MV5A 2E8SA 3I4TA 3KWPA 2CBFA 3NUTA 4H4DA 3NDCA 2ENIA 2EGBA 1WNGA 2DSIA 2EK3A 2QBUA 3ND1A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EH4 A;  3FFY A;  2E15 A;  1CBF A;  2EL2 A;  5HW4 A;  1WYZ A;  3NEI A;  2EMR A;  2EJK A;  2E4N A;  2EL1 A;  2E8R A;  2DXX A;  2PCM A;  2E0N A;  1PJQ A;  2EN5 A;  2E0K A;  2PCH A;  4E16 A;  2P5C A;  2DSH A;  2EMU A;  2HUV A;  3FQ6 A;  2EH2 A;  2PB4 A;  2EJZ A;  2OWU A;  2DXW A;  2BB3 A;  1VCE A;  2E4R A;  2P6L A;  1VA0 A;  2EH5 A;  2ED5 A;  2EHL A;  2DV7 A;  2E8Q A;  2DXV A;  2E17 A;  2EGL A;  1WDE A;  2EL0 A;  2HUT A;  2DV3 A;  2DEK A;  2HR8 A;  1VHV A;  2Z6R A;  2EEQ A;  2EK2 A;  2P6I A;  1PJT A;  3HH1 A;  2ELD A;  2P2X A;  2EGS A;  1PJS A;  2EL3 A;  2P6D A;  1VE2 A;  2PCK A;  2EK7 A;  2EK4 A;  2DSG A;  2PCA A;  2DV5 A;  2ELE A;  2YBO A;  2NPN A;  2OWG A;  2OWK A;  2PCI A;  2YBQ A;  1V9A A;  2ZVC A;  2E16 A;  2E8H A;  2P6K A;  2HUX A;  2E7R A;  2OWV A;  2OWF A;  2P5F A;  2HUQ A;  2PB6 A;  2EKA A;  2DV4 A;  2E07 A;  2P9D A;  2E08 A;  2EJJ A;  2PCG A;  2EHC A;  2PB5 A;  2ZVB A;  1S4D A;  2ED3 A;  2E8S A;  3I4T A;  3KWP A;  2CBF A;  3NUT A;  3NDC A;  2ENI A;  2EGB A;  1WNG A;  2DSI A;  2EK3 A;  2QBU A;  3ND1 A; 
#chains in the Genus database with same CATH topology
 2EH4 A;  3FFY A;  4N7B A;  2E15 A;  1CBF A;  2EL2 A;  5HW4 A;  3KEL A;  1WYZ A;  3NEI A;  2EMR A;  2EJK A;  2E4N A;  2EL1 A;  2E8R A;  2DXX A;  2PCM A;  2E0N A;  3SZU A;  1PJQ A;  3DNF A;  2EN5 A;  2E0K A;  2PCH A;  4E16 A;  2P5C A;  2DSH A;  3UV7 A;  2EMU A;  4H4E A;  2HUV A;  3FQ6 A;  2EH2 A;  2PB4 A;  2EJZ A;  2OWU A;  2DXW A;  3UV6 A;  2BB3 A;  1VCE A;  2E4R A;  3UWM A;  3URK A;  3LMM A;  3TIX B;  2P6L A;  1VA0 A;  2EH5 A;  2ED5 A;  2EHL A;  2DV7 A;  3F7T A;  2E8Q A;  2DXV A;  4MUX A;  2E17 A;  3T0F A;  2EGL A;  1WDE A;  2EL0 A;  4H4C A;  2HUT A;  4EB3 A;  2DV3 A;  4MV0 A;  2DEK A;  3UTD A;  2HR8 A;  1VHV A;  4MUY A;  2Z6R A;  2EEQ A;  2EK2 A;  2P6I A;  1PJT A;  3HH1 A;  2ELD A;  2P2X A;  2EGS A;  1PJS A;  3ZGL A;  2EL3 A;  2P6D A;  3ZGN A;  1VE2 A;  2PCK A;  2EK7 A;  3SZO A;  2EK4 A;  2DSG A;  3T0G A;  2PCA A;  2DV5 A;  2ELE A;  3KE8 A;  3KEM A;  2YBO A;  2NPN A;  2KYY A;  2OWG A;  2OWK A;  2PCI A;  2YBQ A;  1V9A A;  2ZVC A;  2E16 A;  3UTC A;  2E8H A;  3UV3 A;  2P6K A;  2HUX A;  2E7R A;  2OWV A;  2OWF A;  2P5F A;  2HUQ A;  2PB6 A;  2EKA A;  2DV4 A;  2E07 A;  2P9D A;  2E08 A;  2EJJ A;  2PCG A;  2EHC A;  2PB5 A;  3SZL A;  2ZVB A;  1S4D A;  2ED3 A;  3KEF A;  3KE9 A;  4MV5 A;  2E8S A;  3I4T A;  3KWP A;  2CBF A;  3NUT A;  4H4D A;  3NDC A;  2ENI A;  2EGB A;  1WNG A;  2DSI A;  2EK3 A;  2QBU A;  3ND1 A; 
#chains in the Genus database with same CATH homology
 2EH4 A;  3FFY A;  4N7B A;  2E15 A;  1CBF A;  2EL2 A;  5HW4 A;  3KEL A;  1WYZ A;  3NEI A;  2EMR A;  2EJK A;  2E4N A;  2EL1 A;  2E8R A;  2DXX A;  2PCM A;  2E0N A;  3SZU A;  1PJQ A;  3DNF A;  2EN5 A;  2E0K A;  2PCH A;  4E16 A;  2P5C A;  2DSH A;  3UV7 A;  2EMU A;  4H4E A;  2HUV A;  3FQ6 A;  2EH2 A;  2PB4 A;  2EJZ A;  2OWU A;  2DXW A;  3UV6 A;  2BB3 A;  1VCE A;  2E4R A;  3UWM A;  3URK A;  3LMM A;  3TIX B;  2P6L A;  1VA0 A;  2EH5 A;  2ED5 A;  2EHL A;  2DV7 A;  3F7T A;  2E8Q A;  2DXV A;  4MUX A;  2E17 A;  3T0F A;  2EGL A;  1WDE A;  2EL0 A;  4H4C A;  2HUT A;  4EB3 A;  2DV3 A;  4MV0 A;  2DEK A;  3UTD A;  2HR8 A;  1VHV A;  4MUY A;  2Z6R A;  2EEQ A;  2EK2 A;  2P6I A;  1PJT A;  3HH1 A;  2ELD A;  2P2X A;  2EGS A;  1PJS A;  3ZGL A;  2EL3 A;  2P6D A;  3ZGN A;  1VE2 A;  2PCK A;  2EK7 A;  3SZO A;  2EK4 A;  2DSG A;  3T0G A;  2PCA A;  2DV5 A;  2ELE A;  3KE8 A;  3KEM A;  2YBO A;  2NPN A;  2KYY A;  2OWG A;  2OWK A;  2PCI A;  2YBQ A;  1V9A A;  2ZVC A;  2E16 A;  3UTC A;  2E8H A;  3UV3 A;  2P6K A;  2HUX A;  2E7R A;  2OWV A;  2OWF A;  2P5F A;  2HUQ A;  2PB6 A;  2EKA A;  2DV4 A;  2E07 A;  2P9D A;  2E08 A;  2EJJ A;  2PCG A;  2EHC A;  2PB5 A;  3SZL A;  2ZVB A;  1S4D A;  2ED3 A;  3KEF A;  3KE9 A;  4MV5 A;  2E8S A;  3I4T A;  3KWP A;  2CBF A;  3NUT A;  4H4D A;  3NDC A;  2ENI A;  2EGB A;  1WNG A;  2DSI A;  2EK3 A;  2QBU A;  3ND1 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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