2EHCA

Crystal structure of asn69 to lys mutant of diphthine synthase
Total Genus 82
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
82
sequence length
265
structure length
265
Chain Sequence
b'MVLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFEKIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords diphthine synthase
publication title Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
rcsb
source organism Pyrococcus horikoshii
molecule tags Transferase
total genus 82
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2ehcA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2ehcA01
2QBUA 2DV4A 2ELEA 2EK4A 1PJQA 2EL1A 1WNGA 2EL0A 2E07A 2E8RA 1CBFA 2EJZA 2EMUA 2HUXA 3NDCA 1V9AA 3NUTA 2ENIA 2E16A 3NEIA 1WDEA 2E7RA 2DV7A 5HW4A 2P6DA 2E0KA 2PCIA 1WYZA 3FFYA 2ED3A 2EK7A 2OWVA 2E4RA 2PCHA 2E4NA 2OWUA 2EJKA 2EK3A 2DXWA 2P6IA 2EH5A 2E17A 2ZVBA 2E8SA 2EMRA 2PB5A 1S4DA 2EGLA 3FQ6A 2YBQA 2DSGA 3I4TA 2EK2A 2EKAA 2OWGA 2HR8A 2P6LA 2EGBA 2P5CA 1VE2A 2E08A 2EHLA 2PB4A 3ND1A 2E0NA 2YBOA 2P5FA 2ELDA 1PJTA 2DV5A 2HUTA 2DEKA 2OWKA 2ZVCA 2Z6RA 2P6KA 2P9DA 2CBFA 2P2XA 2BB3A 2HUVA 2HUQA 1PJSA 2DV3A 2EH2A 2NPNA 3HH1A 2PCKA 1VCEA 1VHVA 2OWFA 2EH4A 2EJJA 2EHCA 2E15A 2PCGA 2ED5A 2PCMA 2EL2A 3KWPA 2DXXA 2PCAA 2E8QA 1VA0A 2DSHA 2DSIA 2EL3A 4E16A 2PB6A 2E8HA 2DXVA 2EEQA 2EGSA 2EN5A
chains in the Genus database with same CATH superfamily
2QBUA 2DV4A 2ELEA 2EK4A 1PJQA 3KE9A 2EL1A 1WNGA 2EL0A 2E07A 2E8RA 1CBFA 2EJZA 2EMUA 2HUXA 3NDCA 1V9AA 3NUTA 3URKA 2ENIA 2E16A 3NEIA 1WDEA 4MV0A 2E7RA 2DV7A 3UTDA 5HW4A 2P6DA 2E0KA 2PCIA 1WYZA 3UTCA 3FFYA 2ED3A 4N7BA 3T0FA 4H4DA 2EK7A 2OWVA 3SZLA 2E4RA 2PCHA 2E4NA 2OWUA 3UV6A 2EJKA 2EK3A 2DXWA 2P6IA 2EH5A 2E17A 2ZVBA 2E8SA 2EMRA 2PB5A 3ZGNA 1S4DA 3TIXB 2EGLA 3FQ6A 2YBQA 2DSGA 3F7TA 3I4TA 3KEMA 2EK2A 4MV5A 2EKAA 3KELA 2OWGA 2HR8A 2P6LA 2EGBA 3KEFA 4EB3A 2P5CA 1VE2A 2E08A 2EHLA 2PB4A 3ND1A 2E0NA 2YBOA 3ZGLA 2P5FA 2ELDA 1PJTA 2DV5A 2HUTA 2DEKA 2OWKA 3UV3A 2ZVCA 2Z6RA 2P6KA 2P9DA 2CBFA 3UWMA 2P2XA 2BB3A 2HUVA 2HUQA 1PJSA 3KE8A 2DV3A 2EH2A 2NPNA 3HH1A 2PCKA 1VCEA 1VHVA 3UV7A 2OWFA 4MUYA 4MUXA 2KYYA 2EH4A 2EJJA 2EHCA 2E15A 2PCGA 2ED5A 2PCMA 2EL2A 3T0GA 4H4EA 3KWPA 2DXXA 3SZUA 2PCAA 2E8QA 4H4CA 1VA0A 3DNFA 3SZOA 2DSHA 2DSIA 2EL3A 4E16A 2PB6A 2E8HA 2DXVA 2EEQA 2EGSA 2EN5A 3LMMA
chains in the Genus database with same CATH topology
2QBUA 2DV4A 2ELEA 2EK4A 1PJQA 3KE9A 2EL1A 1WNGA 2EL0A 2E07A 2E8RA 1CBFA 2EJZA 2EMUA 2HUXA 3NDCA 1V9AA 3NUTA 3URKA 2ENIA 2E16A 3NEIA 1WDEA 4MV0A 2E7RA 2DV7A 3UTDA 5HW4A 2P6DA 2E0KA 2PCIA 1WYZA 3UTCA 3FFYA 2ED3A 4N7BA 3T0FA 4H4DA 2EK7A 2OWVA 3SZLA 2E4RA 2PCHA 2E4NA 2OWUA 3UV6A 2EJKA 2EK3A 2DXWA 2P6IA 2EH5A 2E17A 2ZVBA 2E8SA 2EMRA 2PB5A 3ZGNA 1S4DA 3TIXB 2EGLA 3FQ6A 2YBQA 2DSGA 3F7TA 3I4TA 3KEMA 2EK2A 4MV5A 2EKAA 3KELA 2OWGA 2HR8A 2P6LA 2EGBA 3KEFA 4EB3A 2P5CA 1VE2A 2E08A 2EHLA 2PB4A 3ND1A 2E0NA 2YBOA 3ZGLA 2P5FA 2ELDA 1PJTA 2DV5A 2HUTA 2DEKA 2OWKA 3UV3A 2ZVCA 2Z6RA 2P6KA 2P9DA 2CBFA 3UWMA 2P2XA 2BB3A 2HUVA 2HUQA 1PJSA 3KE8A 2DV3A 2EH2A 2NPNA 3HH1A 2PCKA 1VCEA 1VHVA 3UV7A 2OWFA 4MUYA 4MUXA 2KYYA 2EH4A 2EJJA 2EHCA 2E15A 2PCGA 2ED5A 2PCMA 2EL2A 3T0GA 4H4EA 3KWPA 2DXXA 3SZUA 2PCAA 2E8QA 4H4CA 1VA0A 3DNFA 3SZOA 2DSHA 2DSIA 2EL3A 4E16A 2PB6A 2E8HA 2DXVA 2EEQA 2EGSA 2EN5A 3LMMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2QBU A;  2DV4 A;  2ELE A;  2EK4 A;  1PJQ A;  2EL1 A;  1WNG A;  2EL0 A;  2E07 A;  2E8R A;  1CBF A;  2EJZ A;  2EMU A;  2HUX A;  3NDC A;  1V9A A;  3NUT A;  2ENI A;  2E16 A;  3NEI A;  1WDE A;  2E7R A;  2DV7 A;  5HW4 A;  2P6D A;  2E0K A;  2PCI A;  1WYZ A;  3FFY A;  2ED3 A;  2EK7 A;  2OWV A;  2E4R A;  2PCH A;  2E4N A;  2OWU A;  2EJK A;  2EK3 A;  2DXW A;  2P6I A;  2EH5 A;  2E17 A;  2ZVB A;  2E8S A;  2EMR A;  2PB5 A;  1S4D A;  2EGL A;  3FQ6 A;  2YBQ A;  2DSG A;  3I4T A;  2EK2 A;  2EKA A;  2OWG A;  2HR8 A;  2P6L A;  2EGB A;  2P5C A;  1VE2 A;  2E08 A;  2EHL A;  2PB4 A;  3ND1 A;  2E0N A;  2YBO A;  2P5F A;  2ELD A;  1PJT A;  2DV5 A;  2HUT A;  2DEK A;  2OWK A;  2ZVC A;  2Z6R A;  2P6K A;  2P9D A;  2CBF A;  2P2X A;  2BB3 A;  2HUV A;  2HUQ A;  1PJS A;  2DV3 A;  2EH2 A;  2NPN A;  3HH1 A;  2PCK A;  1VCE A;  1VHV A;  2OWF A;  2EH4 A;  2EJJ A;  2EHC A;  2E15 A;  2PCG A;  2ED5 A;  2PCM A;  2EL2 A;  3KWP A;  2DXX A;  2PCA A;  2E8Q A;  1VA0 A;  2DSH A;  2DSI A;  2EL3 A;  4E16 A;  2PB6 A;  2E8H A;  2DXV A;  2EEQ A;  2EGS A;  2EN5 A; 
#chains in the Genus database with same CATH topology
 2QBU A;  2DV4 A;  2ELE A;  2EK4 A;  1PJQ A;  3KE9 A;  2EL1 A;  1WNG A;  2EL0 A;  2E07 A;  2E8R A;  1CBF A;  2EJZ A;  2EMU A;  2HUX A;  3NDC A;  1V9A A;  3NUT A;  3URK A;  2ENI A;  2E16 A;  3NEI A;  1WDE A;  4MV0 A;  2E7R A;  2DV7 A;  3UTD A;  5HW4 A;  2P6D A;  2E0K A;  2PCI A;  1WYZ A;  3UTC A;  3FFY A;  2ED3 A;  4N7B A;  3T0F A;  4H4D A;  2EK7 A;  2OWV A;  3SZL A;  2E4R A;  2PCH A;  2E4N A;  2OWU A;  3UV6 A;  2EJK A;  2EK3 A;  2DXW A;  2P6I A;  2EH5 A;  2E17 A;  2ZVB A;  2E8S A;  2EMR A;  2PB5 A;  3ZGN A;  1S4D A;  3TIX B;  2EGL A;  3FQ6 A;  2YBQ A;  2DSG A;  3F7T A;  3I4T A;  3KEM A;  2EK2 A;  4MV5 A;  2EKA A;  3KEL A;  2OWG A;  2HR8 A;  2P6L A;  2EGB A;  3KEF A;  4EB3 A;  2P5C A;  1VE2 A;  2E08 A;  2EHL A;  2PB4 A;  3ND1 A;  2E0N A;  2YBO A;  3ZGL A;  2P5F A;  2ELD A;  1PJT A;  2DV5 A;  2HUT A;  2DEK A;  2OWK A;  3UV3 A;  2ZVC A;  2Z6R A;  2P6K A;  2P9D A;  2CBF A;  3UWM A;  2P2X A;  2BB3 A;  2HUV A;  2HUQ A;  1PJS A;  3KE8 A;  2DV3 A;  2EH2 A;  2NPN A;  3HH1 A;  2PCK A;  1VCE A;  1VHV A;  3UV7 A;  2OWF A;  4MUY A;  4MUX A;  2KYY A;  2EH4 A;  2EJJ A;  2EHC A;  2E15 A;  2PCG A;  2ED5 A;  2PCM A;  2EL2 A;  3T0G A;  4H4E A;  3KWP A;  2DXX A;  3SZU A;  2PCA A;  2E8Q A;  4H4C A;  1VA0 A;  3DNF A;  3SZO A;  2DSH A;  2DSI A;  2EL3 A;  4E16 A;  2PB6 A;  2E8H A;  2DXV A;  2EEQ A;  2EGS A;  2EN5 A;  3LMM A; 
#chains in the Genus database with same CATH homology
 2QBU A;  2DV4 A;  2ELE A;  2EK4 A;  1PJQ A;  3KE9 A;  2EL1 A;  1WNG A;  2EL0 A;  2E07 A;  2E8R A;  1CBF A;  2EJZ A;  2EMU A;  2HUX A;  3NDC A;  1V9A A;  3NUT A;  3URK A;  2ENI A;  2E16 A;  3NEI A;  1WDE A;  4MV0 A;  2E7R A;  2DV7 A;  3UTD A;  5HW4 A;  2P6D A;  2E0K A;  2PCI A;  1WYZ A;  3UTC A;  3FFY A;  2ED3 A;  4N7B A;  3T0F A;  4H4D A;  2EK7 A;  2OWV A;  3SZL A;  2E4R A;  2PCH A;  2E4N A;  2OWU A;  3UV6 A;  2EJK A;  2EK3 A;  2DXW A;  2P6I A;  2EH5 A;  2E17 A;  2ZVB A;  2E8S A;  2EMR A;  2PB5 A;  3ZGN A;  1S4D A;  3TIX B;  2EGL A;  3FQ6 A;  2YBQ A;  2DSG A;  3F7T A;  3I4T A;  3KEM A;  2EK2 A;  4MV5 A;  2EKA A;  3KEL A;  2OWG A;  2HR8 A;  2P6L A;  2EGB A;  3KEF A;  4EB3 A;  2P5C A;  1VE2 A;  2E08 A;  2EHL A;  2PB4 A;  3ND1 A;  2E0N A;  2YBO A;  3ZGL A;  2P5F A;  2ELD A;  1PJT A;  2DV5 A;  2HUT A;  2DEK A;  2OWK A;  3UV3 A;  2ZVC A;  2Z6R A;  2P6K A;  2P9D A;  2CBF A;  3UWM A;  2P2X A;  2BB3 A;  2HUV A;  2HUQ A;  1PJS A;  3KE8 A;  2DV3 A;  2EH2 A;  2NPN A;  3HH1 A;  2PCK A;  1VCE A;  1VHV A;  3UV7 A;  2OWF A;  4MUY A;  4MUX A;  2KYY A;  2EH4 A;  2EJJ A;  2EHC A;  2E15 A;  2PCG A;  2ED5 A;  2PCM A;  2EL2 A;  3T0G A;  4H4E A;  3KWP A;  2DXX A;  3SZU A;  2PCA A;  2E8Q A;  4H4C A;  1VA0 A;  3DNF A;  3SZO A;  2DSH A;  2DSI A;  2EL3 A;  4E16 A;  2PB6 A;  2E8H A;  2DXV A;  2EEQ A;  2EGS A;  2EN5 A;  3LMM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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