2EMUA

Mutant l21h structure of ph0725 from pyrococcus horikoshii ot3
Total Genus 85
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
85
sequence length
265
structure length
265
Chain Sequence
b'MVLYFIGLGLYDERDITVKGHEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords diphthine synthase
publication title Mutant L21H structure of PH0725 from Pyrococcus horikoshii OT3
rcsb
source organism Pyrococcus horikoshii
molecule tags Transferase
total genus 85
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2emuA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2emuA01
2E7RA 2ELEA 2EKAA 2EMUA 2EL2A 2HUVA 2HUQA 2PB5A 2E8SA 1S4DA 1VCEA 2E15A 1WNGA 1PJQA 2DXXA 2HUTA 2EH4A 2EK4A 2E16A 2PB6A 2EL3A 2E8HA 2EGBA 2EK3A 2DXWA 2ED5A 2EEQA 2E0KA 5HW4A 2EHCA 2PCGA 2OWFA 1VHVA 3FFYA 2E17A 2EMRA 2EK7A 2ENIA 2DV7A 2EJJA 3NDCA 2DV3A 2HUXA 2QBUA 2PCIA 1WDEA 2DSHA 3HH1A 2CBFA 2DV4A 2P2XA 2E4NA 2EJZA 2E0NA 2PCMA 3KWPA 2EJKA 2ZVCA 2OWKA 2DV5A 2P5FA 2EN5A 2EGSA 1VA0A 1PJTA 2P6DA 2DSIA 2DXVA 2P6IA 2BB3A 2E07A 2OWVA 2EGLA 2EH5A 2EK2A 2EL0A 2DSGA 2DEKA 2EH2A 2OWGA 3ND1A 2EL1A 2EHLA 2P6KA 2PCHA 3NUTA 2E4RA 2E08A 2P6LA 2PCAA 2ELDA 1CBFA 2OWUA 4E16A 2NPNA 2ED3A 1WYZA 2ZVBA 1PJSA 3I4TA 2P9DA 1VE2A 2Z6RA 2YBQA 2PB4A 2E8RA 1V9AA 2E8QA 3NEIA 3FQ6A 2P5CA 2HR8A 2PCKA 2YBOA
chains in the Genus database with same CATH superfamily
3UV3A 2E7RA 2ELEA 2EKAA 2EMUA 2EL2A 2HUVA 2HUQA 2PB5A 2E8SA 4H4EA 1S4DA 1VCEA 2E15A 1WNGA 1PJQA 2DXXA 2HUTA 3LMMA 3ZGNA 2EH4A 2KYYA 2EK4A 3UTCA 2E16A 2PB6A 2EL3A 3TIXB 3URKA 2E8HA 4H4DA 4MV0A 2EGBA 2EK3A 2DXWA 2ED5A 2EEQA 2E0KA 5HW4A 2EHCA 2PCGA 4MUYA 3SZUA 2OWFA 1VHVA 3FFYA 3SZOA 2E17A 2EMRA 2EK7A 3KE9A 2ENIA 2DV7A 2EJJA 4H4CA 3NDCA 2DV3A 2HUXA 2QBUA 2PCIA 1WDEA 2DSHA 3HH1A 2CBFA 2DV4A 4N7BA 2P2XA 2E4NA 4MV5A 2EJZA 2E0NA 2PCMA 3KWPA 2EJKA 3UV7A 2ZVCA 3KELA 2OWKA 2DV5A 2P5FA 4MUXA 3KE8A 2EN5A 3UV6A 4EB3A 2EGSA 3F7TA 1VA0A 1PJTA 2P6DA 3KEMA 2DSIA 2DXVA 2P6IA 2BB3A 2E07A 2OWVA 2EGLA 2EH5A 2EK2A 2EL0A 2DSGA 2DEKA 2EH2A 2OWGA 3ND1A 2EL1A 2EHLA 2P6KA 2PCHA 3NUTA 2E4RA 2E08A 2P6LA 2PCAA 2ELDA 1CBFA 2OWUA 3UWMA 4E16A 2NPNA 2ED3A 3DNFA 1WYZA 2ZVBA 1PJSA 3I4TA 3SZLA 2P9DA 3T0GA 1VE2A 3KEFA 2Z6RA 2YBQA 2PB4A 3T0FA 2E8RA 3ZGLA 1V9AA 2E8QA 3NEIA 3FQ6A 2P5CA 2HR8A 2PCKA 3UTDA 2YBOA
chains in the Genus database with same CATH topology
3UV3A 2E7RA 2ELEA 2EKAA 2EMUA 2EL2A 2HUVA 2HUQA 2PB5A 2E8SA 4H4EA 1S4DA 1VCEA 2E15A 1WNGA 1PJQA 2DXXA 2HUTA 3LMMA 3ZGNA 2EH4A 2KYYA 2EK4A 3UTCA 2E16A 2PB6A 2EL3A 3TIXB 3URKA 2E8HA 4H4DA 4MV0A 2EGBA 2EK3A 2DXWA 2ED5A 2EEQA 2E0KA 5HW4A 2EHCA 2PCGA 4MUYA 3SZUA 2OWFA 1VHVA 3FFYA 3SZOA 2E17A 2EMRA 2EK7A 3KE9A 2ENIA 2DV7A 2EJJA 4H4CA 3NDCA 2DV3A 2HUXA 2QBUA 2PCIA 1WDEA 2DSHA 3HH1A 2CBFA 2DV4A 4N7BA 2P2XA 2E4NA 4MV5A 2EJZA 2E0NA 2PCMA 3KWPA 2EJKA 3UV7A 2ZVCA 3KELA 2OWKA 2DV5A 2P5FA 4MUXA 3KE8A 2EN5A 3UV6A 4EB3A 2EGSA 3F7TA 1VA0A 1PJTA 2P6DA 3KEMA 2DSIA 2DXVA 2P6IA 2BB3A 2E07A 2OWVA 2EGLA 2EH5A 2EK2A 2EL0A 2DSGA 2DEKA 2EH2A 2OWGA 3ND1A 2EL1A 2EHLA 2P6KA 2PCHA 3NUTA 2E4RA 2E08A 2P6LA 2PCAA 2ELDA 1CBFA 2OWUA 3UWMA 4E16A 2NPNA 2ED3A 3DNFA 1WYZA 2ZVBA 1PJSA 3I4TA 3SZLA 2P9DA 3T0GA 1VE2A 3KEFA 2Z6RA 2YBQA 2PB4A 3T0FA 2E8RA 3ZGLA 1V9AA 2E8QA 3NEIA 3FQ6A 2P5CA 2HR8A 2PCKA 3UTDA 2YBOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2E7R A;  2ELE A;  2EKA A;  2EMU A;  2EL2 A;  2HUV A;  2HUQ A;  2PB5 A;  2E8S A;  1S4D A;  1VCE A;  2E15 A;  1WNG A;  1PJQ A;  2DXX A;  2HUT A;  2EH4 A;  2EK4 A;  2E16 A;  2PB6 A;  2EL3 A;  2E8H A;  2EGB A;  2EK3 A;  2DXW A;  2ED5 A;  2EEQ A;  2E0K A;  5HW4 A;  2EHC A;  2PCG A;  2OWF A;  1VHV A;  3FFY A;  2E17 A;  2EMR A;  2EK7 A;  2ENI A;  2DV7 A;  2EJJ A;  3NDC A;  2DV3 A;  2HUX A;  2QBU A;  2PCI A;  1WDE A;  2DSH A;  3HH1 A;  2CBF A;  2DV4 A;  2P2X A;  2E4N A;  2EJZ A;  2E0N A;  2PCM A;  3KWP A;  2EJK A;  2ZVC A;  2OWK A;  2DV5 A;  2P5F A;  2EN5 A;  2EGS A;  1VA0 A;  1PJT A;  2P6D A;  2DSI A;  2DXV A;  2P6I A;  2BB3 A;  2E07 A;  2OWV A;  2EGL A;  2EH5 A;  2EK2 A;  2EL0 A;  2DSG A;  2DEK A;  2EH2 A;  2OWG A;  3ND1 A;  2EL1 A;  2EHL A;  2P6K A;  2PCH A;  3NUT A;  2E4R A;  2E08 A;  2P6L A;  2PCA A;  2ELD A;  1CBF A;  2OWU A;  4E16 A;  2NPN A;  2ED3 A;  1WYZ A;  2ZVB A;  1PJS A;  3I4T A;  2P9D A;  1VE2 A;  2Z6R A;  2YBQ A;  2PB4 A;  2E8R A;  1V9A A;  2E8Q A;  3NEI A;  3FQ6 A;  2P5C A;  2HR8 A;  2PCK A;  2YBO A; 
#chains in the Genus database with same CATH topology
 3UV3 A;  2E7R A;  2ELE A;  2EKA A;  2EMU A;  2EL2 A;  2HUV A;  2HUQ A;  2PB5 A;  2E8S A;  4H4E A;  1S4D A;  1VCE A;  2E15 A;  1WNG A;  1PJQ A;  2DXX A;  2HUT A;  3LMM A;  3ZGN A;  2EH4 A;  2KYY A;  2EK4 A;  3UTC A;  2E16 A;  2PB6 A;  2EL3 A;  3TIX B;  3URK A;  2E8H A;  4H4D A;  4MV0 A;  2EGB A;  2EK3 A;  2DXW A;  2ED5 A;  2EEQ A;  2E0K A;  5HW4 A;  2EHC A;  2PCG A;  4MUY A;  3SZU A;  2OWF A;  1VHV A;  3FFY A;  3SZO A;  2E17 A;  2EMR A;  2EK7 A;  3KE9 A;  2ENI A;  2DV7 A;  2EJJ A;  4H4C A;  3NDC A;  2DV3 A;  2HUX A;  2QBU A;  2PCI A;  1WDE A;  2DSH A;  3HH1 A;  2CBF A;  2DV4 A;  4N7B A;  2P2X A;  2E4N A;  4MV5 A;  2EJZ A;  2E0N A;  2PCM A;  3KWP A;  2EJK A;  3UV7 A;  2ZVC A;  3KEL A;  2OWK A;  2DV5 A;  2P5F A;  4MUX A;  3KE8 A;  2EN5 A;  3UV6 A;  4EB3 A;  2EGS A;  3F7T A;  1VA0 A;  1PJT A;  2P6D A;  3KEM A;  2DSI A;  2DXV A;  2P6I A;  2BB3 A;  2E07 A;  2OWV A;  2EGL A;  2EH5 A;  2EK2 A;  2EL0 A;  2DSG A;  2DEK A;  2EH2 A;  2OWG A;  3ND1 A;  2EL1 A;  2EHL A;  2P6K A;  2PCH A;  3NUT A;  2E4R A;  2E08 A;  2P6L A;  2PCA A;  2ELD A;  1CBF A;  2OWU A;  3UWM A;  4E16 A;  2NPN A;  2ED3 A;  3DNF A;  1WYZ A;  2ZVB A;  1PJS A;  3I4T A;  3SZL A;  2P9D A;  3T0G A;  1VE2 A;  3KEF A;  2Z6R A;  2YBQ A;  2PB4 A;  3T0F A;  2E8R A;  3ZGL A;  1V9A A;  2E8Q A;  3NEI A;  3FQ6 A;  2P5C A;  2HR8 A;  2PCK A;  3UTD A;  2YBO A; 
#chains in the Genus database with same CATH homology
 3UV3 A;  2E7R A;  2ELE A;  2EKA A;  2EMU A;  2EL2 A;  2HUV A;  2HUQ A;  2PB5 A;  2E8S A;  4H4E A;  1S4D A;  1VCE A;  2E15 A;  1WNG A;  1PJQ A;  2DXX A;  2HUT A;  3LMM A;  3ZGN A;  2EH4 A;  2KYY A;  2EK4 A;  3UTC A;  2E16 A;  2PB6 A;  2EL3 A;  3TIX B;  3URK A;  2E8H A;  4H4D A;  4MV0 A;  2EGB A;  2EK3 A;  2DXW A;  2ED5 A;  2EEQ A;  2E0K A;  5HW4 A;  2EHC A;  2PCG A;  4MUY A;  3SZU A;  2OWF A;  1VHV A;  3FFY A;  3SZO A;  2E17 A;  2EMR A;  2EK7 A;  3KE9 A;  2ENI A;  2DV7 A;  2EJJ A;  4H4C A;  3NDC A;  2DV3 A;  2HUX A;  2QBU A;  2PCI A;  1WDE A;  2DSH A;  3HH1 A;  2CBF A;  2DV4 A;  4N7B A;  2P2X A;  2E4N A;  4MV5 A;  2EJZ A;  2E0N A;  2PCM A;  3KWP A;  2EJK A;  3UV7 A;  2ZVC A;  3KEL A;  2OWK A;  2DV5 A;  2P5F A;  4MUX A;  3KE8 A;  2EN5 A;  3UV6 A;  4EB3 A;  2EGS A;  3F7T A;  1VA0 A;  1PJT A;  2P6D A;  3KEM A;  2DSI A;  2DXV A;  2P6I A;  2BB3 A;  2E07 A;  2OWV A;  2EGL A;  2EH5 A;  2EK2 A;  2EL0 A;  2DSG A;  2DEK A;  2EH2 A;  2OWG A;  3ND1 A;  2EL1 A;  2EHL A;  2P6K A;  2PCH A;  3NUT A;  2E4R A;  2E08 A;  2P6L A;  2PCA A;  2ELD A;  1CBF A;  2OWU A;  3UWM A;  4E16 A;  2NPN A;  2ED3 A;  3DNF A;  1WYZ A;  2ZVB A;  1PJS A;  3I4T A;  3SZL A;  2P9D A;  3T0G A;  1VE2 A;  3KEF A;  2Z6R A;  2YBQ A;  2PB4 A;  3T0F A;  2E8R A;  3ZGL A;  1V9A A;  2E8Q A;  3NEI A;  3FQ6 A;  2P5C A;  2HR8 A;  2PCK A;  3UTD A;  2YBO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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