2EL0A

Structural study of project id ph0725 from pyrococcus horikoshii ot3 (l21m)
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
265
structure length
265
Chain Sequence
MVLYFIGLGLYDERDITVKGMEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L21M)
rcsb
source organism Pyrococcus horikoshii
molecule tags Transferase
molecule keywords diphthine synthase
total genus 83
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2el0A02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2el0A01
2EL3A 2E08A 2ELEA 2EN5A 1WDEA 2ED5A 2P5FA 2E16A 2EK3A 2ZVCA 3NUTA 2E8RA 2EK2A 2EMRA 2E17A 2QBUA 1CBFA 2EJJA 2CBFA 2ENIA 3FFYA 2Z6RA 2PCKA 2E8SA 5HW4A 1WNGA 2YBQA 2PB6A 3FQ6A 2P6DA 2P2XA 2YBOA 2PB4A 3HH1A 3NDCA 2P5CA 2DXVA 2EK4A 2DV3A 2EH5A 2PCGA 2P6KA 2EH2A 2EJKA 1VHVA 2DXWA 2EHCA 2E4NA 1PJQA 1VA0A 2OWFA 2BB3A 2OWVA 2E15A 4E16A 2EHLA 2EJZA 3I4TA 2ELDA 2EL0A 1WYZA 2HUQA 2DV5A 2EH4A 2P6IA 2DEKA 2OWKA 1VE2A 1S4DA 2E8QA 2E07A 2E8HA 2OWGA 2DV4A 3KWPA 2EGSA 2E7RA 2EL1A 2HUVA 3ND1A 3NEIA 1VCEA 2PCIA 2HUTA 2NPNA 2PCAA 2EGLA 2HUXA 2HR8A 2EKAA 2EL2A 2DXXA 2OWUA 2PCMA 2EEQA 1V9AA 2EMUA 2E0NA 2E0KA 2EK7A 2EGBA 1PJSA 2PB5A 1PJTA 2DSIA 2P9DA 2PCHA 2E4RA 2DSGA 2ED3A 2DSHA 2DV7A 2ZVBA 2P6LA
chains in the Genus database with same CATH superfamily
2EL3A 2E08A 3T0FA 2ELEA 2EN5A 1WDEA 2ED5A 2P5FA 2E16A 2EK3A 2ZVCA 3NUTA 3SZUA 4N7BA 2E8RA 2EK2A 2EMRA 2E17A 2KYYA 2QBUA 1CBFA 2EJJA 2CBFA 2ENIA 3KE8A 3UV3A 3FFYA 2Z6RA 2PCKA 3KEFA 2E8SA 3SZOA 5HW4A 1WNGA 2YBQA 2PB6A 3FQ6A 4H4EA 2P6DA 2P2XA 2YBOA 2PB4A 3HH1A 4H4CA 3NDCA 4EB3A 2P5CA 2DXVA 2EK4A 2DV3A 2EH5A 2PCGA 2P6KA 3ZGLA 2EH2A 2EJKA 3URKA 1VHVA 2DXWA 2EHCA 2E4NA 1PJQA 1VA0A 2OWFA 3UTCA 2BB3A 2OWVA 2E15A 4E16A 2EHLA 2EJZA 3I4TA 3UV6A 2ELDA 2EL0A 1WYZA 2HUQA 2DV5A 2EH4A 2P6IA 2DEKA 2OWKA 1VE2A 1S4DA 2E8QA 2E07A 3T0GA 2E8HA 3SZLA 2OWGA 2DV4A 3KWPA 2EGSA 2E7RA 2EL1A 3LMMA 2HUVA 3UTDA 3ND1A 3NEIA 3DNFA 3TIXB 1VCEA 3UV7A 3KELA 2PCIA 2HUTA 2NPNA 3ZGNA 2PCAA 3UWMA 2EGLA 2HUXA 2HR8A 2EKAA 3KE9A 2EL2A 2DXXA 2OWUA 2PCMA 2EEQA 4MUYA 4MV0A 1V9AA 2EMUA 4MV5A 2E0NA 2E0KA 2EK7A 4MUXA 2EGBA 1PJSA 2PB5A 1PJTA 2DSIA 3F7TA 3KEMA 2P9DA 2PCHA 2E4RA 4H4DA 2DSGA 2ED3A 2DSHA 2DV7A 2ZVBA 2P6LA
chains in the Genus database with same CATH topology
2EL3A 2E08A 3T0FA 2ELEA 2EN5A 1WDEA 2ED5A 2P5FA 2E16A 2EK3A 2ZVCA 3NUTA 3SZUA 4N7BA 2E8RA 2EK2A 2EMRA 2E17A 2KYYA 2QBUA 1CBFA 2EJJA 2CBFA 2ENIA 3KE8A 3UV3A 3FFYA 2Z6RA 2PCKA 3KEFA 2E8SA 3SZOA 5HW4A 1WNGA 2YBQA 2PB6A 3FQ6A 4H4EA 2P6DA 2P2XA 2YBOA 2PB4A 3HH1A 4H4CA 3NDCA 4EB3A 2P5CA 2DXVA 2EK4A 2DV3A 2EH5A 2PCGA 2P6KA 3ZGLA 2EH2A 2EJKA 3URKA 1VHVA 2DXWA 2EHCA 2E4NA 1PJQA 1VA0A 2OWFA 3UTCA 2BB3A 2OWVA 2E15A 4E16A 2EHLA 2EJZA 3I4TA 3UV6A 2ELDA 2EL0A 1WYZA 2HUQA 2DV5A 2EH4A 2P6IA 2DEKA 2OWKA 1VE2A 1S4DA 2E8QA 2E07A 3T0GA 2E8HA 3SZLA 2OWGA 2DV4A 3KWPA 2EGSA 2E7RA 2EL1A 3LMMA 2HUVA 3UTDA 3ND1A 3NEIA 3DNFA 3TIXB 1VCEA 3UV7A 3KELA 2PCIA 2HUTA 2NPNA 3ZGNA 2PCAA 3UWMA 2EGLA 2HUXA 2HR8A 2EKAA 3KE9A 2EL2A 2DXXA 2OWUA 2PCMA 2EEQA 4MUYA 4MV0A 1V9AA 2EMUA 4MV5A 2E0NA 2E0KA 2EK7A 4MUXA 2EGBA 1PJSA 2PB5A 1PJTA 2DSIA 3F7TA 3KEMA 2P9DA 2PCHA 2E4RA 4H4DA 2DSGA 2ED3A 2DSHA 2DV7A 2ZVBA 2P6LA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2EL3 A;  2E08 A;  2ELE A;  2EN5 A;  1WDE A;  2ED5 A;  2P5F A;  2E16 A;  2EK3 A;  2ZVC A;  3NUT A;  2E8R A;  2EK2 A;  2EMR A;  2E17 A;  2QBU A;  1CBF A;  2EJJ A;  2CBF A;  2ENI A;  3FFY A;  2Z6R A;  2PCK A;  2E8S A;  5HW4 A;  1WNG A;  2YBQ A;  2PB6 A;  3FQ6 A;  2P6D A;  2P2X A;  2YBO A;  2PB4 A;  3HH1 A;  3NDC A;  2P5C A;  2DXV A;  2EK4 A;  2DV3 A;  2EH5 A;  2PCG A;  2P6K A;  2EH2 A;  2EJK A;  1VHV A;  2DXW A;  2EHC A;  2E4N A;  1PJQ A;  1VA0 A;  2OWF A;  2BB3 A;  2OWV A;  2E15 A;  4E16 A;  2EHL A;  2EJZ A;  3I4T A;  2ELD A;  2EL0 A;  1WYZ A;  2HUQ A;  2DV5 A;  2EH4 A;  2P6I A;  2DEK A;  2OWK A;  1VE2 A;  1S4D A;  2E8Q A;  2E07 A;  2E8H A;  2OWG A;  2DV4 A;  3KWP A;  2EGS A;  2E7R A;  2EL1 A;  2HUV A;  3ND1 A;  3NEI A;  1VCE A;  2PCI A;  2HUT A;  2NPN A;  2PCA A;  2EGL A;  2HUX A;  2HR8 A;  2EKA A;  2EL2 A;  2DXX A;  2OWU A;  2PCM A;  2EEQ A;  1V9A A;  2EMU A;  2E0N A;  2E0K A;  2EK7 A;  2EGB A;  1PJS A;  2PB5 A;  1PJT A;  2DSI A;  2P9D A;  2PCH A;  2E4R A;  2DSG A;  2ED3 A;  2DSH A;  2DV7 A;  2ZVB A;  2P6L A; 
#chains in the Genus database with same CATH topology
 2EL3 A;  2E08 A;  3T0F A;  2ELE A;  2EN5 A;  1WDE A;  2ED5 A;  2P5F A;  2E16 A;  2EK3 A;  2ZVC A;  3NUT A;  3SZU A;  4N7B A;  2E8R A;  2EK2 A;  2EMR A;  2E17 A;  2KYY A;  2QBU A;  1CBF A;  2EJJ A;  2CBF A;  2ENI A;  3KE8 A;  3UV3 A;  3FFY A;  2Z6R A;  2PCK A;  3KEF A;  2E8S A;  3SZO A;  5HW4 A;  1WNG A;  2YBQ A;  2PB6 A;  3FQ6 A;  4H4E A;  2P6D A;  2P2X A;  2YBO A;  2PB4 A;  3HH1 A;  4H4C A;  3NDC A;  4EB3 A;  2P5C A;  2DXV A;  2EK4 A;  2DV3 A;  2EH5 A;  2PCG A;  2P6K A;  3ZGL A;  2EH2 A;  2EJK A;  3URK A;  1VHV A;  2DXW A;  2EHC A;  2E4N A;  1PJQ A;  1VA0 A;  2OWF A;  3UTC A;  2BB3 A;  2OWV A;  2E15 A;  4E16 A;  2EHL A;  2EJZ A;  3I4T A;  3UV6 A;  2ELD A;  2EL0 A;  1WYZ A;  2HUQ A;  2DV5 A;  2EH4 A;  2P6I A;  2DEK A;  2OWK A;  1VE2 A;  1S4D A;  2E8Q A;  2E07 A;  3T0G A;  2E8H A;  3SZL A;  2OWG A;  2DV4 A;  3KWP A;  2EGS A;  2E7R A;  2EL1 A;  3LMM A;  2HUV A;  3UTD A;  3ND1 A;  3NEI A;  3DNF A;  3TIX B;  1VCE A;  3UV7 A;  3KEL A;  2PCI A;  2HUT A;  2NPN A;  3ZGN A;  2PCA A;  3UWM A;  2EGL A;  2HUX A;  2HR8 A;  2EKA A;  3KE9 A;  2EL2 A;  2DXX A;  2OWU A;  2PCM A;  2EEQ A;  4MUY A;  4MV0 A;  1V9A A;  2EMU A;  4MV5 A;  2E0N A;  2E0K A;  2EK7 A;  4MUX A;  2EGB A;  1PJS A;  2PB5 A;  1PJT A;  2DSI A;  3F7T A;  3KEM A;  2P9D A;  2PCH A;  2E4R A;  4H4D A;  2DSG A;  2ED3 A;  2DSH A;  2DV7 A;  2ZVB A;  2P6L A; 
#chains in the Genus database with same CATH homology
 2EL3 A;  2E08 A;  3T0F A;  2ELE A;  2EN5 A;  1WDE A;  2ED5 A;  2P5F A;  2E16 A;  2EK3 A;  2ZVC A;  3NUT A;  3SZU A;  4N7B A;  2E8R A;  2EK2 A;  2EMR A;  2E17 A;  2KYY A;  2QBU A;  1CBF A;  2EJJ A;  2CBF A;  2ENI A;  3KE8 A;  3UV3 A;  3FFY A;  2Z6R A;  2PCK A;  3KEF A;  2E8S A;  3SZO A;  5HW4 A;  1WNG A;  2YBQ A;  2PB6 A;  3FQ6 A;  4H4E A;  2P6D A;  2P2X A;  2YBO A;  2PB4 A;  3HH1 A;  4H4C A;  3NDC A;  4EB3 A;  2P5C A;  2DXV A;  2EK4 A;  2DV3 A;  2EH5 A;  2PCG A;  2P6K A;  3ZGL A;  2EH2 A;  2EJK A;  3URK A;  1VHV A;  2DXW A;  2EHC A;  2E4N A;  1PJQ A;  1VA0 A;  2OWF A;  3UTC A;  2BB3 A;  2OWV A;  2E15 A;  4E16 A;  2EHL A;  2EJZ A;  3I4T A;  3UV6 A;  2ELD A;  2EL0 A;  1WYZ A;  2HUQ A;  2DV5 A;  2EH4 A;  2P6I A;  2DEK A;  2OWK A;  1VE2 A;  1S4D A;  2E8Q A;  2E07 A;  3T0G A;  2E8H A;  3SZL A;  2OWG A;  2DV4 A;  3KWP A;  2EGS A;  2E7R A;  2EL1 A;  3LMM A;  2HUV A;  3UTD A;  3ND1 A;  3NEI A;  3DNF A;  3TIX B;  1VCE A;  3UV7 A;  3KEL A;  2PCI A;  2HUT A;  2NPN A;  3ZGN A;  2PCA A;  3UWM A;  2EGL A;  2HUX A;  2HR8 A;  2EKA A;  3KE9 A;  2EL2 A;  2DXX A;  2OWU A;  2PCM A;  2EEQ A;  4MUY A;  4MV0 A;  1V9A A;  2EMU A;  4MV5 A;  2E0N A;  2E0K A;  2EK7 A;  4MUX A;  2EGB A;  1PJS A;  2PB5 A;  1PJT A;  2DSI A;  3F7T A;  3KEM A;  2P9D A;  2PCH A;  2E4R A;  4H4D A;  2DSG A;  2ED3 A;  2DSH A;  2DV7 A;  2ZVB A;  2P6L A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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