2EL0A

Structural study of project id ph0725 from pyrococcus horikoshii ot3 (l21m)
Total Genus 83
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
83
sequence length
265
structure length
265
Chain Sequence
b'MVLYFIGLGLYDERDITVKGMEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVFTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords diphthine synthase
publication title Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L21M)
rcsb
source organism Pyrococcus horikoshii
molecule tags Transferase
total genus 83
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2el0A02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2el0A01
2ENIA 3FFYA 2E8RA 2EJZA 2DSIA 1VA0A 2OWGA 2EGSA 2PB5A 5HW4A 2PCIA 2DSHA 2EKAA 2E16A 3HH1A 2EH4A 2DV7A 2DV4A 2E4NA 2EEQA 3FQ6A 2QBUA 2PCGA 2E8QA 2DXXA 2E0KA 2P6IA 1WDEA 2OWUA 2EL1A 2P9DA 2E17A 1VHVA 3NUTA 1VE2A 1S4DA 2YBQA 2PB6A 1PJQA 2EGBA 4E16A 2EN5A 2OWKA 2E7RA 2DV3A 1V9AA 3ND1A 2EH2A 2OWFA 2E15A 2PCAA 2DV5A 3KWPA 2HUVA 2E8SA 2ELDA 2DEKA 2NPNA 2P6DA 2DSGA 2ED3A 2EGLA 2EK4A 1PJTA 2P2XA 2PCKA 2E0NA 2EHCA 2BB3A 2E08A 1WNGA 2YBOA 2EJKA 2CBFA 2HR8A 2P5FA 2PCHA 1VCEA 3NEIA 3NDCA 2EHLA 2OWVA 2EK3A 2ED5A 2EL2A 2P5CA 2EK7A 1CBFA 2PB4A 2EMRA 2Z6RA 1PJSA 2DXVA 2P6LA 2HUXA 2EL0A 3I4TA 2EJJA 2E07A 2HUQA 2ELEA 2E8HA 2PCMA 2P6KA 2E4RA 1WYZA 2EL3A 2DXWA 2HUTA 2EK2A 2EH5A 2ZVCA 2EMUA 2ZVBA
chains in the Genus database with same CATH superfamily
2ENIA 3FFYA 2E8RA 2EJZA 3T0FA 2DSIA 1VA0A 2OWGA 2EGSA 2PB5A 5HW4A 2PCIA 2DSHA 3F7TA 2EKAA 3KEMA 2E16A 3HH1A 2EH4A 2DV7A 2DV4A 2E4NA 2EEQA 3FQ6A 2QBUA 3KELA 2PCGA 2E8QA 2DXXA 2E0KA 4H4EA 2P6IA 1WDEA 2OWUA 3KEFA 3KE8A 3LMMA 2EL1A 2P9DA 2E17A 3DNFA 1VHVA 3NUTA 1VE2A 3SZOA 1S4DA 2YBQA 2PB6A 1PJQA 2EGBA 4E16A 2EN5A 2OWKA 4MUYA 2E7RA 4H4CA 2DV3A 1V9AA 3ND1A 3UTCA 2EH2A 2OWFA 2E15A 2PCAA 2DV5A 3KWPA 2KYYA 2HUVA 2E8SA 2ELDA 3UTDA 4EB3A 2DEKA 4H4DA 4MUXA 2NPNA 2P6DA 2DSGA 4MV0A 3TIXB 2ED3A 2EGLA 2EK4A 1PJTA 2P2XA 3SZLA 3UV6A 2PCKA 2E0NA 2EHCA 2BB3A 2E08A 1WNGA 3URKA 3KE9A 2YBOA 2EJKA 2CBFA 2HR8A 2P5FA 2PCHA 1VCEA 3NEIA 3NDCA 2EHLA 2OWVA 2EK3A 2ED5A 2EL2A 3UV7A 2P5CA 2EK7A 1CBFA 2PB4A 4N7BA 3SZUA 2EMRA 2Z6RA 1PJSA 2DXVA 2P6LA 2HUXA 3UWMA 2EL0A 3I4TA 3UV3A 2EJJA 2E07A 2HUQA 2ELEA 2E8HA 2PCMA 3ZGNA 2P6KA 2E4RA 1WYZA 2EL3A 4MV5A 2DXWA 2HUTA 2EK2A 2EH5A 2ZVCA 3ZGLA 2EMUA 3T0GA 2ZVBA
chains in the Genus database with same CATH topology
2ENIA 3FFYA 2E8RA 2EJZA 3T0FA 2DSIA 1VA0A 2OWGA 2EGSA 2PB5A 5HW4A 2PCIA 2DSHA 3F7TA 2EKAA 3KEMA 2E16A 3HH1A 2EH4A 2DV7A 2DV4A 2E4NA 2EEQA 3FQ6A 2QBUA 3KELA 2PCGA 2E8QA 2DXXA 2E0KA 4H4EA 2P6IA 1WDEA 2OWUA 3KEFA 3KE8A 3LMMA 2EL1A 2P9DA 2E17A 3DNFA 1VHVA 3NUTA 1VE2A 3SZOA 1S4DA 2YBQA 2PB6A 1PJQA 2EGBA 4E16A 2EN5A 2OWKA 4MUYA 2E7RA 4H4CA 2DV3A 1V9AA 3ND1A 3UTCA 2EH2A 2OWFA 2E15A 2PCAA 2DV5A 3KWPA 2KYYA 2HUVA 2E8SA 2ELDA 3UTDA 4EB3A 2DEKA 4H4DA 4MUXA 2NPNA 2P6DA 2DSGA 4MV0A 3TIXB 2ED3A 2EGLA 2EK4A 1PJTA 2P2XA 3SZLA 3UV6A 2PCKA 2E0NA 2EHCA 2BB3A 2E08A 1WNGA 3URKA 3KE9A 2YBOA 2EJKA 2CBFA 2HR8A 2P5FA 2PCHA 1VCEA 3NEIA 3NDCA 2EHLA 2OWVA 2EK3A 2ED5A 2EL2A 3UV7A 2P5CA 2EK7A 1CBFA 2PB4A 4N7BA 3SZUA 2EMRA 2Z6RA 1PJSA 2DXVA 2P6LA 2HUXA 3UWMA 2EL0A 3I4TA 3UV3A 2EJJA 2E07A 2HUQA 2ELEA 2E8HA 2PCMA 3ZGNA 2P6KA 2E4RA 1WYZA 2EL3A 4MV5A 2DXWA 2HUTA 2EK2A 2EH5A 2ZVCA 3ZGLA 2EMUA 3T0GA 2ZVBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ENI A;  3FFY A;  2E8R A;  2EJZ A;  2DSI A;  1VA0 A;  2OWG A;  2EGS A;  2PB5 A;  5HW4 A;  2PCI A;  2DSH A;  2EKA A;  2E16 A;  3HH1 A;  2EH4 A;  2DV7 A;  2DV4 A;  2E4N A;  2EEQ A;  3FQ6 A;  2QBU A;  2PCG A;  2E8Q A;  2DXX A;  2E0K A;  2P6I A;  1WDE A;  2OWU A;  2EL1 A;  2P9D A;  2E17 A;  1VHV A;  3NUT A;  1VE2 A;  1S4D A;  2YBQ A;  2PB6 A;  1PJQ A;  2EGB A;  4E16 A;  2EN5 A;  2OWK A;  2E7R A;  2DV3 A;  1V9A A;  3ND1 A;  2EH2 A;  2OWF A;  2E15 A;  2PCA A;  2DV5 A;  3KWP A;  2HUV A;  2E8S A;  2ELD A;  2DEK A;  2NPN A;  2P6D A;  2DSG A;  2ED3 A;  2EGL A;  2EK4 A;  1PJT A;  2P2X A;  2PCK A;  2E0N A;  2EHC A;  2BB3 A;  2E08 A;  1WNG A;  2YBO A;  2EJK A;  2CBF A;  2HR8 A;  2P5F A;  2PCH A;  1VCE A;  3NEI A;  3NDC A;  2EHL A;  2OWV A;  2EK3 A;  2ED5 A;  2EL2 A;  2P5C A;  2EK7 A;  1CBF A;  2PB4 A;  2EMR A;  2Z6R A;  1PJS A;  2DXV A;  2P6L A;  2HUX A;  2EL0 A;  3I4T A;  2EJJ A;  2E07 A;  2HUQ A;  2ELE A;  2E8H A;  2PCM A;  2P6K A;  2E4R A;  1WYZ A;  2EL3 A;  2DXW A;  2HUT A;  2EK2 A;  2EH5 A;  2ZVC A;  2EMU A;  2ZVB A; 
#chains in the Genus database with same CATH topology
 2ENI A;  3FFY A;  2E8R A;  2EJZ A;  3T0F A;  2DSI A;  1VA0 A;  2OWG A;  2EGS A;  2PB5 A;  5HW4 A;  2PCI A;  2DSH A;  3F7T A;  2EKA A;  3KEM A;  2E16 A;  3HH1 A;  2EH4 A;  2DV7 A;  2DV4 A;  2E4N A;  2EEQ A;  3FQ6 A;  2QBU A;  3KEL A;  2PCG A;  2E8Q A;  2DXX A;  2E0K A;  4H4E A;  2P6I A;  1WDE A;  2OWU A;  3KEF A;  3KE8 A;  3LMM A;  2EL1 A;  2P9D A;  2E17 A;  3DNF A;  1VHV A;  3NUT A;  1VE2 A;  3SZO A;  1S4D A;  2YBQ A;  2PB6 A;  1PJQ A;  2EGB A;  4E16 A;  2EN5 A;  2OWK A;  4MUY A;  2E7R A;  4H4C A;  2DV3 A;  1V9A A;  3ND1 A;  3UTC A;  2EH2 A;  2OWF A;  2E15 A;  2PCA A;  2DV5 A;  3KWP A;  2KYY A;  2HUV A;  2E8S A;  2ELD A;  3UTD A;  4EB3 A;  2DEK A;  4H4D A;  4MUX A;  2NPN A;  2P6D A;  2DSG A;  4MV0 A;  3TIX B;  2ED3 A;  2EGL A;  2EK4 A;  1PJT A;  2P2X A;  3SZL A;  3UV6 A;  2PCK A;  2E0N A;  2EHC A;  2BB3 A;  2E08 A;  1WNG A;  3URK A;  3KE9 A;  2YBO A;  2EJK A;  2CBF A;  2HR8 A;  2P5F A;  2PCH A;  1VCE A;  3NEI A;  3NDC A;  2EHL A;  2OWV A;  2EK3 A;  2ED5 A;  2EL2 A;  3UV7 A;  2P5C A;  2EK7 A;  1CBF A;  2PB4 A;  4N7B A;  3SZU A;  2EMR A;  2Z6R A;  1PJS A;  2DXV A;  2P6L A;  2HUX A;  3UWM A;  2EL0 A;  3I4T A;  3UV3 A;  2EJJ A;  2E07 A;  2HUQ A;  2ELE A;  2E8H A;  2PCM A;  3ZGN A;  2P6K A;  2E4R A;  1WYZ A;  2EL3 A;  4MV5 A;  2DXW A;  2HUT A;  2EK2 A;  2EH5 A;  2ZVC A;  3ZGL A;  2EMU A;  3T0G A;  2ZVB A; 
#chains in the Genus database with same CATH homology
 2ENI A;  3FFY A;  2E8R A;  2EJZ A;  3T0F A;  2DSI A;  1VA0 A;  2OWG A;  2EGS A;  2PB5 A;  5HW4 A;  2PCI A;  2DSH A;  3F7T A;  2EKA A;  3KEM A;  2E16 A;  3HH1 A;  2EH4 A;  2DV7 A;  2DV4 A;  2E4N A;  2EEQ A;  3FQ6 A;  2QBU A;  3KEL A;  2PCG A;  2E8Q A;  2DXX A;  2E0K A;  4H4E A;  2P6I A;  1WDE A;  2OWU A;  3KEF A;  3KE8 A;  3LMM A;  2EL1 A;  2P9D A;  2E17 A;  3DNF A;  1VHV A;  3NUT A;  1VE2 A;  3SZO A;  1S4D A;  2YBQ A;  2PB6 A;  1PJQ A;  2EGB A;  4E16 A;  2EN5 A;  2OWK A;  4MUY A;  2E7R A;  4H4C A;  2DV3 A;  1V9A A;  3ND1 A;  3UTC A;  2EH2 A;  2OWF A;  2E15 A;  2PCA A;  2DV5 A;  3KWP A;  2KYY A;  2HUV A;  2E8S A;  2ELD A;  3UTD A;  4EB3 A;  2DEK A;  4H4D A;  4MUX A;  2NPN A;  2P6D A;  2DSG A;  4MV0 A;  3TIX B;  2ED3 A;  2EGL A;  2EK4 A;  1PJT A;  2P2X A;  3SZL A;  3UV6 A;  2PCK A;  2E0N A;  2EHC A;  2BB3 A;  2E08 A;  1WNG A;  3URK A;  3KE9 A;  2YBO A;  2EJK A;  2CBF A;  2HR8 A;  2P5F A;  2PCH A;  1VCE A;  3NEI A;  3NDC A;  2EHL A;  2OWV A;  2EK3 A;  2ED5 A;  2EL2 A;  3UV7 A;  2P5C A;  2EK7 A;  1CBF A;  2PB4 A;  4N7B A;  3SZU A;  2EMR A;  2Z6R A;  1PJS A;  2DXV A;  2P6L A;  2HUX A;  3UWM A;  2EL0 A;  3I4T A;  3UV3 A;  2EJJ A;  2E07 A;  2HUQ A;  2ELE A;  2E8H A;  2PCM A;  3ZGN A;  2P6K A;  2E4R A;  1WYZ A;  2EL3 A;  4MV5 A;  2DXW A;  2HUT A;  2EK2 A;  2EH5 A;  2ZVC A;  3ZGL A;  2EMU A;  3T0G A;  2ZVB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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