3FQ6 | Genus

Total Genus 26

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	26
sequence length	114
structure length	114
Chain Sequence	NATAFVPALVASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYESPHRLLKTLTQFAEYFGTERQATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Transferase
source organism	Bacteroides thetaiotaomicron
publication title	The crystal structure of a methyltransferase domain from Bacteroides thetaiotaomicron VPI rcsb
molecule keywords	Methyltransferase
total genus	26
structure length	114
sequence length	114
chains with identical sequence	B
ec nomenclature
pdb deposition date	2009-01-07

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.950.10	Alpha Beta	2-Layer Sandwich	Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2	Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2	3fq6A00

2EEQA 2HUTA 2EK4A 2YBOA 2ELDA 2P2XA 3FQ6A 2DXXA 2E7RA 3NDCA 2HR8A 1WYZA 2HUVA 2EJKA 1WDEA 2OWFA 2PCAA 1PJTA 2EL3A 2ELEA 1V9AA 2EKAA 2PCGA 2P5CA 1VHVA 3KWPA 2E4NA 2DXVA 1S4DA 2E0KA 2ENIA 2ZVBA 2Z6RA 2EJZA 2E07A 2EN5A 2E8RA 2P6KA 1CBFA 2E4RA 2EL0A 2BB3A 2ZVCA 3NEIA 2PCIA 2EMUA 2PCKA 1WNGA 2E17A 2P5FA 2EGLA 3NUTA 2E08A 2DV5A 2P6LA 2EK3A 2EH4A 2YBQA 2E8SA 2EMRA 2QBUA 2E0NA 2EJJA 2EH5A 2CBFA 2P9DA 2EK2A 2OWKA 1VA0A 2DXWA 2P6DA 4E16A 2E16A 2OWGA 2DV4A 2HUXA 2PB6A 2ED5A 2E15A 2HUQA 2EL2A 2DV3A 2P6IA 2EL1A 2EGSA 2DEKA 3ND1A 2E8HA 2EGBA 2DSGA 2DV7A 2OWVA 1PJSA 1VCEA 1VE2A 2DSIA 5HW4A 3FFYA 2OWUA 2EH2A 2PCMA 2E8QA 2EK7A 2PB4A 2ED3A 2PCHA 1PJQA 2EHCA 2PB5A 3I4TA 2DSHA 2NPNA 2EHLA
chains in the Genus database with same CATH superfamily

2EEQA 2HUTA 2EK4A 2YBOA 2ELDA 2P2XA 3FQ6A 2DXXA 2E7RA 3NDCA 2HR8A 1WYZA 2HUVA 2EJKA 1WDEA 2OWFA 2PCAA 1PJTA 2EL3A 2ELEA 1V9AA 2EKAA 2PCGA 2P5CA 1VHVA 3KWPA 2E4NA 2DXVA 1S4DA 2E0KA 2ENIA 2ZVBA 2Z6RA 2EJZA 2E07A 2EN5A 2E8RA 2P6KA 1CBFA 2E4RA 2EL0A 2BB3A 2ZVCA 3NEIA 2PCIA 2EMUA 2PCKA 1WNGA 2E17A 2P5FA 2EGLA 3NUTA 2E08A 2DV5A 2P6LA 2EK3A 2EH4A 2YBQA 2E8SA 2EMRA 2QBUA 2E0NA 2KYYA 2EJJA 2EH5A 2CBFA 2P9DA 2EK2A 2OWKA 1VA0A 2DXWA 2P6DA 4E16A 2E16A 2OWGA 2DV4A 2HUXA 2PB6A 2ED5A 2E15A 2HUQA 2EL2A 2DV3A 2P6IA 2EL1A 2EGSA 2DEKA 3ND1A 2E8HA 2EGBA 3LMMA 2DSGA 2DV7A 2OWVA 1PJSA 1VCEA 1VE2A 2DSIA 5HW4A 3FFYA 2OWUA 2EH2A 2PCMA 2E8QA 2EK7A 2PB4A 2ED3A 2PCHA 1PJQA 2EHCA 2PB5A 3I4TA 2DSHA 2NPNA 2EHLA
chains in the Genus database with same CATH topology

2EEQA 2HUTA 2EK4A 2YBOA 2ELDA 2P2XA 3FQ6A 2DXXA 2E7RA 3NDCA 2HR8A 1WYZA 2HUVA 2EJKA 1WDEA 2OWFA 2PCAA 1PJTA 2EL3A 2ELEA 1V9AA 2EKAA 2PCGA 2P5CA 1VHVA 3KWPA 2E4NA 2DXVA 1S4DA 2E0KA 2ENIA 2ZVBA 2Z6RA 2EJZA 2E07A 2EN5A 2E8RA 2P6KA 1CBFA 2E4RA 2EL0A 2BB3A 2ZVCA 3NEIA 2PCIA 2EMUA 2PCKA 1WNGA 2E17A 2P5FA 2EGLA 3NUTA 2E08A 2DV5A 2P6LA 2EK3A 2EH4A 2YBQA 2E8SA 2EMRA 2QBUA 2E0NA 2KYYA 2EJJA 2EH5A 2CBFA 2P9DA 2EK2A 2OWKA 1VA0A 2DXWA 2P6DA 4E16A 2E16A 2OWGA 2DV4A 2HUXA 2PB6A 2ED5A 2E15A 2HUQA 2EL2A 2DV3A 2P6IA 2EL1A 2EGSA 2DEKA 3ND1A 2E8HA 2EGBA 3LMMA 2DSGA 2DV7A 2OWVA 1PJSA 1VCEA 1VE2A 2DSIA 5HW4A 3FFYA 2OWUA 2EH2A 2PCMA 2E8QA 2EK7A 2PB4A 2ED3A 2PCHA 1PJQA 2EHCA 2PB5A 3I4TA 2DSHA 2NPNA 2EHLA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 2EEQ A;  2HUT A;  2EK4 A;  2YBO A;  2ELD A;  2P2X A;  3FQ6 A;  2DXX A;  2E7R A;  3NDC A;  2HR8 A;  1WYZ A;  2HUV A;  2EJK A;  1WDE A;  2OWF A;  2PCA A;  1PJT A;  2EL3 A;  2ELE A;  1V9A A;  2EKA A;  2PCG A;  2P5C A;  1VHV A;  3KWP A;  2E4N A;  2DXV A;  1S4D A;  2E0K A;  2ENI A;  2ZVB A;  2Z6R A;  2EJZ A;  2E07 A;  2EN5 A;  2E8R A;  2P6K A;  1CBF A;  2E4R A;  2EL0 A;  2BB3 A;  2ZVC A;  3NEI A;  2PCI A;  2EMU A;  2PCK A;  1WNG A;  2E17 A;  2P5F A;  2EGL A;  3NUT A;  2E08 A;  2DV5 A;  2P6L A;  2EK3 A;  2EH4 A;  2YBQ A;  2E8S A;  2EMR A;  2QBU A;  2E0N A;  2EJJ A;  2EH5 A;  2CBF A;  2P9D A;  2EK2 A;  2OWK A;  1VA0 A;  2DXW A;  2P6D A;  4E16 A;  2E16 A;  2OWG A;  2DV4 A;  2HUX A;  2PB6 A;  2ED5 A;  2E15 A;  2HUQ A;  2EL2 A;  2DV3 A;  2P6I A;  2EL1 A;  2EGS A;  2DEK A;  3ND1 A;  2E8H A;  2EGB A;  2DSG A;  2DV7 A;  2OWV A;  1PJS A;  1VCE A;  1VE2 A;  2DSI A;  5HW4 A;  3FFY A;  2OWU A;  2EH2 A;  2PCM A;  2E8Q A;  2EK7 A;  2PB4 A;  2ED3 A;  2PCH A;  1PJQ A;  2EHC A;  2PB5 A;  3I4T A;  2DSH A;  2NPN A;  2EHL A; 
#chains in the Genus database with same CATH topology
 2EEQ A;  2HUT A;  2EK4 A;  2YBO A;  2ELD A;  2P2X A;  3FQ6 A;  2DXX A;  2E7R A;  3NDC A;  2HR8 A;  1WYZ A;  2HUV A;  2EJK A;  1WDE A;  2OWF A;  2PCA A;  1PJT A;  2EL3 A;  2ELE A;  1V9A A;  2EKA A;  2PCG A;  2P5C A;  1VHV A;  3KWP A;  2E4N A;  2DXV A;  1S4D A;  2E0K A;  2ENI A;  2ZVB A;  2Z6R A;  2EJZ A;  2E07 A;  2EN5 A;  2E8R A;  2P6K A;  1CBF A;  2E4R A;  2EL0 A;  2BB3 A;  2ZVC A;  3NEI A;  2PCI A;  2EMU A;  2PCK A;  1WNG A;  2E17 A;  2P5F A;  2EGL A;  3NUT A;  2E08 A;  2DV5 A;  2P6L A;  2EK3 A;  2EH4 A;  2YBQ A;  2E8S A;  2EMR A;  2QBU A;  2E0N A;  2KYY A;  2EJJ A;  2EH5 A;  2CBF A;  2P9D A;  2EK2 A;  2OWK A;  1VA0 A;  2DXW A;  2P6D A;  4E16 A;  2E16 A;  2OWG A;  2DV4 A;  2HUX A;  2PB6 A;  2ED5 A;  2E15 A;  2HUQ A;  2EL2 A;  2DV3 A;  2P6I A;  2EL1 A;  2EGS A;  2DEK A;  3ND1 A;  2E8H A;  2EGB A;  3LMM A;  2DSG A;  2DV7 A;  2OWV A;  1PJS A;  1VCE A;  1VE2 A;  2DSI A;  5HW4 A;  3FFY A;  2OWU A;  2EH2 A;  2PCM A;  2E8Q A;  2EK7 A;  2PB4 A;  2ED3 A;  2PCH A;  1PJQ A;  2EHC A;  2PB5 A;  3I4T A;  2DSH A;  2NPN A;  2EHL A; 
#chains in the Genus database with same CATH homology
 2EEQ A;  2HUT A;  2EK4 A;  2YBO A;  2ELD A;  2P2X A;  3FQ6 A;  2DXX A;  2E7R A;  3NDC A;  2HR8 A;  1WYZ A;  2HUV A;  2EJK A;  1WDE A;  2OWF A;  2PCA A;  1PJT A;  2EL3 A;  2ELE A;  1V9A A;  2EKA A;  2PCG A;  2P5C A;  1VHV A;  3KWP A;  2E4N A;  2DXV A;  1S4D A;  2E0K A;  2ENI A;  2ZVB A;  2Z6R A;  2EJZ A;  2E07 A;  2EN5 A;  2E8R A;  2P6K A;  1CBF A;  2E4R A;  2EL0 A;  2BB3 A;  2ZVC A;  3NEI A;  2PCI A;  2EMU A;  2PCK A;  1WNG A;  2E17 A;  2P5F A;  2EGL A;  3NUT A;  2E08 A;  2DV5 A;  2P6L A;  2EK3 A;  2EH4 A;  2YBQ A;  2E8S A;  2EMR A;  2QBU A;  2E0N A;  2KYY A;  2EJJ A;  2EH5 A;  2CBF A;  2P9D A;  2EK2 A;  2OWK A;  1VA0 A;  2DXW A;  2P6D A;  4E16 A;  2E16 A;  2OWG A;  2DV4 A;  2HUX A;  2PB6 A;  2ED5 A;  2E15 A;  2HUQ A;  2EL2 A;  2DV3 A;  2P6I A;  2EL1 A;  2EGS A;  2DEK A;  3ND1 A;  2E8H A;  2EGB A;  3LMM A;  2DSG A;  2DV7 A;  2OWV A;  1PJS A;  1VCE A;  1VE2 A;  2DSI A;  5HW4 A;  3FFY A;  2OWU A;  2EH2 A;  2PCM A;  2E8Q A;  2EK7 A;  2PB4 A;  2ED3 A;  2PCH A;  1PJQ A;  2EHC A;  2PB5 A;  3I4T A;  2DSH A;  2NPN A;  2EHL A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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3FQ6A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization