2ENIA

Mutant f197m structure of ph0725 from pyrococcus horikoshii ot3
Total Genus 79

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
265
structure length
265
Chain Sequence
MVLYFIGLGLYDERDITVKGLEIAKKCDYVFAEFYTSLMAGTTLGRIQKLIGKEIRVLSREDVELNFENIVLPLAKENDVAFLTPGDPLVATTHAELRIRAKRAGVESYVIHAPSIYSAVGITGLHIYKFGKSATVAYPEGNWFPTSYYDVIKENAERGLHTLLFLDIKAEKRMYMTANEAMELLLKVEDMKKGGVMTDDTLVVVLARAGSLNPTIRAGYVKDLIREDFGDPPHILIVPGKLHIVEAEYLVEIAGAPREILRVNV

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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connected with : NaN
molecule tags Transferase
source organism Pyrococcus horikoshii
publication title Mutant F197M structure of PH0725 from Pyrococcus horikoshii OT3
rcsb
molecule keywords diphthine synthase
total genus 79
structure length 265
sequence length 265
chains with identical sequence B
ec nomenclature ec 2.1.1.98: Diphthine synthase.
pdb deposition date 2007-03-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00590 TP_methylase Tetrapyrrole (Corrin/Porphyrin) Methylases
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.950.10 Alpha Beta 2-Layer Sandwich Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 2eniA02
3.40.1010.10 Alpha Beta 3-Layer(aba) Sandwich Cobalt-precorrin-4 Transmethylase; domain 1 Cobalt-precorrin-4 Transmethylase; Domain 1 2eniA01
1VE2A 1WNGA 2Z6RA 1S4DA 2DV7A 2PCKA 2OWVA 1VCEA 2EGSA 2EHCA 2E7RA 2DXXA 2EGLA 2EN5A 1PJTA 2EL0A 2QBUA 2DEKA 1VHVA 3ND1A 2EHLA 2E8QA 3NDCA 2HUXA 2ELDA 2ED5A 5HW4A 3FFYA 2OWGA 2E15A 2PB6A 2EH5A 2PB4A 2EH4A 3KWPA 2EL1A 2HUQA 2HUTA 2P6KA 2EMUA 3I4TA 2EEQA 3NEIA 2BB3A 2P6IA 1WDEA 2E0KA 2E08A 3HH1A 1PJSA 1WYZA 2EK2A 2DV3A 2E4RA 2EJJA 2EK7A 2ZVBA 2EL2A 1CBFA 2P6LA 2PCIA 2ENIA 2EK4A 1PJQA 2E0NA 2PB5A 2P5FA 2E8SA 2OWUA 2DSHA 2DSIA 2DXWA 2E07A 2P2XA 2EL3A 3FQ6A 2HUVA 2PCAA 1VA0A 2EJZA 2OWKA 2DV5A 2E17A 2EJKA 2DSGA 2EKAA 2E8HA 2P9DA 2PCGA 3NUTA 2P6DA 1V9AA 2P5CA 2ED3A 2ZVCA 2NPNA 2EGBA 2HR8A 4E16A 2PCHA 2YBQA 2E16A 2EH2A 2DV4A 2E4NA 2OWFA 2EMRA 2EK3A 2PCMA 2CBFA 2DXVA 2YBOA 2ELEA 2E8RA
chains in the Genus database with same CATH superfamily
1VE2A 1WNGA 3UWMA 2Z6RA 1S4DA 2DV7A 2PCKA 2OWVA 1VCEA 2EGSA 2KYYA 3KEFA 3SZOA 3UTDA 2EHCA 2E7RA 2DXXA 2EGLA 2EN5A 1PJTA 2EL0A 4N7BA 2QBUA 2DEKA 1VHVA 3ND1A 2EHLA 2E8QA 3NDCA 2HUXA 2ELDA 2ED5A 5HW4A 3FFYA 2OWGA 2E15A 2PB6A 2EH5A 2PB4A 2EH4A 4H4DA 3KWPA 2EL1A 2HUQA 3T0FA 2HUTA 2P6KA 2EMUA 3UTCA 4EB3A 3I4TA 2EEQA 3ZGNA 3NEIA 2BB3A 2P6IA 1WDEA 2E0KA 3SZLA 2E08A 3HH1A 1PJSA 1WYZA 2EK2A 3UV6A 2DV3A 2E4RA 2EJJA 2EK7A 2ZVBA 2EL2A 1CBFA 2P6LA 2PCIA 2ENIA 2EK4A 1PJQA 4H4CA 2E0NA 3SZUA 3F7TA 2PB5A 2P5FA 2E8SA 2OWUA 2DSHA 2DSIA 3URKA 2DXWA 2E07A 2P2XA 2EL3A 3FQ6A 2HUVA 2PCAA 4MUXA 1VA0A 2EJZA 3KELA 3T0GA 3UV3A 2OWKA 2DV5A 2E17A 2EJKA 2DSGA 2EKAA 2E8HA 2P9DA 2PCGA 3NUTA 3LMMA 4MV5A 3TIXB 2P6DA 3UV7A 1V9AA 2P5CA 3KE9A 2ED3A 2ZVCA 3KE8A 4H4EA 3ZGLA 2NPNA 4MV0A 2EGBA 2HR8A 4E16A 2PCHA 3DNFA 2YBQA 2E16A 4MUYA 2EH2A 3KEMA 2DV4A 2E4NA 2OWFA 2EMRA 2EK3A 2PCMA 2CBFA 2DXVA 2YBOA 2ELEA 2E8RA
chains in the Genus database with same CATH topology
1VE2A 1WNGA 3UWMA 2Z6RA 1S4DA 2DV7A 2PCKA 2OWVA 1VCEA 2EGSA 2KYYA 3KEFA 3SZOA 3UTDA 2EHCA 2E7RA 2DXXA 2EGLA 2EN5A 1PJTA 2EL0A 4N7BA 2QBUA 2DEKA 1VHVA 3ND1A 2EHLA 2E8QA 3NDCA 2HUXA 2ELDA 2ED5A 5HW4A 3FFYA 2OWGA 2E15A 2PB6A 2EH5A 2PB4A 2EH4A 4H4DA 3KWPA 2EL1A 2HUQA 3T0FA 2HUTA 2P6KA 2EMUA 3UTCA 4EB3A 3I4TA 2EEQA 3ZGNA 3NEIA 2BB3A 2P6IA 1WDEA 2E0KA 3SZLA 2E08A 3HH1A 1PJSA 1WYZA 2EK2A 3UV6A 2DV3A 2E4RA 2EJJA 2EK7A 2ZVBA 2EL2A 1CBFA 2P6LA 2PCIA 2ENIA 2EK4A 1PJQA 4H4CA 2E0NA 3SZUA 3F7TA 2PB5A 2P5FA 2E8SA 2OWUA 2DSHA 2DSIA 3URKA 2DXWA 2E07A 2P2XA 2EL3A 3FQ6A 2HUVA 2PCAA 4MUXA 1VA0A 2EJZA 3KELA 3T0GA 3UV3A 2OWKA 2DV5A 2E17A 2EJKA 2DSGA 2EKAA 2E8HA 2P9DA 2PCGA 3NUTA 3LMMA 4MV5A 3TIXB 2P6DA 3UV7A 1V9AA 2P5CA 3KE9A 2ED3A 2ZVCA 3KE8A 4H4EA 3ZGLA 2NPNA 4MV0A 2EGBA 2HR8A 4E16A 2PCHA 3DNFA 2YBQA 2E16A 4MUYA 2EH2A 3KEMA 2DV4A 2E4NA 2OWFA 2EMRA 2EK3A 2PCMA 2CBFA 2DXVA 2YBOA 2ELEA 2E8RA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1VE2 A;  1WNG A;  2Z6R A;  1S4D A;  2DV7 A;  2PCK A;  2OWV A;  1VCE A;  2EGS A;  2EHC A;  2E7R A;  2DXX A;  2EGL A;  2EN5 A;  1PJT A;  2EL0 A;  2QBU A;  2DEK A;  1VHV A;  3ND1 A;  2EHL A;  2E8Q A;  3NDC A;  2HUX A;  2ELD A;  2ED5 A;  5HW4 A;  3FFY A;  2OWG A;  2E15 A;  2PB6 A;  2EH5 A;  2PB4 A;  2EH4 A;  3KWP A;  2EL1 A;  2HUQ A;  2HUT A;  2P6K A;  2EMU A;  3I4T A;  2EEQ A;  3NEI A;  2BB3 A;  2P6I A;  1WDE A;  2E0K A;  2E08 A;  3HH1 A;  1PJS A;  1WYZ A;  2EK2 A;  2DV3 A;  2E4R A;  2EJJ A;  2EK7 A;  2ZVB A;  2EL2 A;  1CBF A;  2P6L A;  2PCI A;  2ENI A;  2EK4 A;  1PJQ A;  2E0N A;  2PB5 A;  2P5F A;  2E8S A;  2OWU A;  2DSH A;  2DSI A;  2DXW A;  2E07 A;  2P2X A;  2EL3 A;  3FQ6 A;  2HUV A;  2PCA A;  1VA0 A;  2EJZ A;  2OWK A;  2DV5 A;  2E17 A;  2EJK A;  2DSG A;  2EKA A;  2E8H A;  2P9D A;  2PCG A;  3NUT A;  2P6D A;  1V9A A;  2P5C A;  2ED3 A;  2ZVC A;  2NPN A;  2EGB A;  2HR8 A;  4E16 A;  2PCH A;  2YBQ A;  2E16 A;  2EH2 A;  2DV4 A;  2E4N A;  2OWF A;  2EMR A;  2EK3 A;  2PCM A;  2CBF A;  2DXV A;  2YBO A;  2ELE A;  2E8R A; 
#chains in the Genus database with same CATH topology
 1VE2 A;  1WNG A;  3UWM A;  2Z6R A;  1S4D A;  2DV7 A;  2PCK A;  2OWV A;  1VCE A;  2EGS A;  2KYY A;  3KEF A;  3SZO A;  3UTD A;  2EHC A;  2E7R A;  2DXX A;  2EGL A;  2EN5 A;  1PJT A;  2EL0 A;  4N7B A;  2QBU A;  2DEK A;  1VHV A;  3ND1 A;  2EHL A;  2E8Q A;  3NDC A;  2HUX A;  2ELD A;  2ED5 A;  5HW4 A;  3FFY A;  2OWG A;  2E15 A;  2PB6 A;  2EH5 A;  2PB4 A;  2EH4 A;  4H4D A;  3KWP A;  2EL1 A;  2HUQ A;  3T0F A;  2HUT A;  2P6K A;  2EMU A;  3UTC A;  4EB3 A;  3I4T A;  2EEQ A;  3ZGN A;  3NEI A;  2BB3 A;  2P6I A;  1WDE A;  2E0K A;  3SZL A;  2E08 A;  3HH1 A;  1PJS A;  1WYZ A;  2EK2 A;  3UV6 A;  2DV3 A;  2E4R A;  2EJJ A;  2EK7 A;  2ZVB A;  2EL2 A;  1CBF A;  2P6L A;  2PCI A;  2ENI A;  2EK4 A;  1PJQ A;  4H4C A;  2E0N A;  3SZU A;  3F7T A;  2PB5 A;  2P5F A;  2E8S A;  2OWU A;  2DSH A;  2DSI A;  3URK A;  2DXW A;  2E07 A;  2P2X A;  2EL3 A;  3FQ6 A;  2HUV A;  2PCA A;  4MUX A;  1VA0 A;  2EJZ A;  3KEL A;  3T0G A;  3UV3 A;  2OWK A;  2DV5 A;  2E17 A;  2EJK A;  2DSG A;  2EKA A;  2E8H A;  2P9D A;  2PCG A;  3NUT A;  3LMM A;  4MV5 A;  3TIX B;  2P6D A;  3UV7 A;  1V9A A;  2P5C A;  3KE9 A;  2ED3 A;  2ZVC A;  3KE8 A;  4H4E A;  3ZGL A;  2NPN A;  4MV0 A;  2EGB A;  2HR8 A;  4E16 A;  2PCH A;  3DNF A;  2YBQ A;  2E16 A;  4MUY A;  2EH2 A;  3KEM A;  2DV4 A;  2E4N A;  2OWF A;  2EMR A;  2EK3 A;  2PCM A;  2CBF A;  2DXV A;  2YBO A;  2ELE A;  2E8R A; 
#chains in the Genus database with same CATH homology
 1VE2 A;  1WNG A;  3UWM A;  2Z6R A;  1S4D A;  2DV7 A;  2PCK A;  2OWV A;  1VCE A;  2EGS A;  2KYY A;  3KEF A;  3SZO A;  3UTD A;  2EHC A;  2E7R A;  2DXX A;  2EGL A;  2EN5 A;  1PJT A;  2EL0 A;  4N7B A;  2QBU A;  2DEK A;  1VHV A;  3ND1 A;  2EHL A;  2E8Q A;  3NDC A;  2HUX A;  2ELD A;  2ED5 A;  5HW4 A;  3FFY A;  2OWG A;  2E15 A;  2PB6 A;  2EH5 A;  2PB4 A;  2EH4 A;  4H4D A;  3KWP A;  2EL1 A;  2HUQ A;  3T0F A;  2HUT A;  2P6K A;  2EMU A;  3UTC A;  4EB3 A;  3I4T A;  2EEQ A;  3ZGN A;  3NEI A;  2BB3 A;  2P6I A;  1WDE A;  2E0K A;  3SZL A;  2E08 A;  3HH1 A;  1PJS A;  1WYZ A;  2EK2 A;  3UV6 A;  2DV3 A;  2E4R A;  2EJJ A;  2EK7 A;  2ZVB A;  2EL2 A;  1CBF A;  2P6L A;  2PCI A;  2ENI A;  2EK4 A;  1PJQ A;  4H4C A;  2E0N A;  3SZU A;  3F7T A;  2PB5 A;  2P5F A;  2E8S A;  2OWU A;  2DSH A;  2DSI A;  3URK A;  2DXW A;  2E07 A;  2P2X A;  2EL3 A;  3FQ6 A;  2HUV A;  2PCA A;  4MUX A;  1VA0 A;  2EJZ A;  3KEL A;  3T0G A;  3UV3 A;  2OWK A;  2DV5 A;  2E17 A;  2EJK A;  2DSG A;  2EKA A;  2E8H A;  2P9D A;  2PCG A;  3NUT A;  3LMM A;  4MV5 A;  3TIX B;  2P6D A;  3UV7 A;  1V9A A;  2P5C A;  3KE9 A;  2ED3 A;  2ZVC A;  3KE8 A;  4H4E A;  3ZGL A;  2NPN A;  4MV0 A;  2EGB A;  2HR8 A;  4E16 A;  2PCH A;  3DNF A;  2YBQ A;  2E16 A;  4MUY A;  2EH2 A;  3KEM A;  2DV4 A;  2E4N A;  2OWF A;  2EMR A;  2EK3 A;  2PCM A;  2CBF A;  2DXV A;  2YBO A;  2ELE A;  2E8R A; 
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