1A1WA

Fadd death effector domain, f25y mutant, nmr minimized average structure
Total Genus 23
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
23
sequence length
83
structure length
83
Chain Sequence
MDPFLVLLHSVSSSLSSSELTELKYLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELLASLRRHDLLRRVDDFE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH2 (33-38)TIV1 (39-42)AH3 (43-51)EMPTYTIV2 (56-59)AH5 (74-82)AH4 (61-70)AH1 (3-31)Updating...
connected with : NaN
molecule tags Apoptosis
source organism Homo sapiens
publication title NMR structure and mutagenesis of the FADD (Mort1) death-effector domain.
pubmed doi rcsb
molecule keywords FADD PROTEIN
total genus 23
structure length 83
sequence length 83
ec nomenclature
pdb deposition date 1997-12-18
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 1a1wA00
2L9MA 1N3KA 2GF5A 1UCPA 2N83A 4O7QA 3LQRA 4JQWA 2NAQA 1DDFA 2DO9A 2O71A 1CY5A 4DWNA 2YQFA 4IZ7B 3CL3A 3MOPA 2LWEA 1WXPA 4RHWE 2OF5H 4JUPA 1ICHA 2P1HA 2DBDA 2YVIA 2MS7A 4A2WA 4IZ5E 3J63A 2F1SA 3LQQA 1C15A 4FH0A 2NSNA 2KM6A 4LWDA 3J6JA 4O6XA 3MOPG 3KATA 1D2ZA 1D2ZB 2L6AA 4M9XA 2MS8A 2A5YB 2KN6A 2IB1A 2DBFA 1NGRA 2B1WA 4F44A 1DGNA 2LS7A 3EZQA 3EZQB 2N00A 4N1JA 2MN4A 4EWIA 1FADA 3YGSP 3YGSC 2HM2Q 2VGQA 4M9SA 4M9ZA 4QOBA 1CWWA 3CRDA 2N97A 4P4HA 1PN5A 2DBGA 1WH4A 2N1FA 2BBRA 1WMGA 2MPCA 4N1KA 4O9FA 4E9MA 1A1ZA 4UZ0A 3QF2A 4N1LA 4D8OA 2A9IA 4A2QA 2N80A 4RHWA 4P4HI 1YGOA 2NZ7A 1Z6TA 3MOPK 1A1WA 4F42A 1E41A 2DBHA 4I16A 4O9LA 4ZBWA 2N7ZA 4NQKA 4IZAB 2BBZA 2LWDA 2M5VA 2YU0A 2YGSA 2G7RA 2OF5A 2MB9A 3T6PA 1E3YA 2D96A
chains in the Genus database with same CATH superfamily
2L9MA 1N3KA 2GF5A 1UCPA 2N83A 4O7QA 3LQRA 4JQWA 2NAQA 1DDFA 2DO9A 2O71A 1CY5A 4DWNA 2YQFA 4IZ7B 3CL3A 3MOPA 2LWEA 1WXPA 4RHWE 2OF5H 4JUPA 1ICHA 2P1HA 2DBDA 2YVIA 2MS7A 4A2WA 4IZ5E 3J63A 2F1SA 3LQQA 1C15A 4FH0A 2NSNA 2KM6A 4LWDA 3J6JA 4O6XA 3MOPG 3KATA 1D2ZA 1D2ZB 2L6AA 4M9XA 2MS8A 2A5YB 2KN6A 2IB1A 2DBFA 1NGRA 2B1WA 4F44A 1DGNA 2LS7A 2XV9A 3EZQA 3EZQB 2N00A 4N1JA 2MN4A 4EWIA 1FADA 2MJMA 3YGSP 3YGSC 2HM2Q 2VGQA 4M9SA 4M9ZA 4QOBA 1CWWA 3CRDA 2N97A 4P4HA 1PN5A 2DBGA 1WH4A 2N1FA 2BBRA 1WMGA 2MPCA 4N1KA 4O9FA 4E9MA 1A1ZA 4UZ0A 3QF2A 4N1LA 4D8OA 2A9IA 4A2QA 2N80A 4RHWA 4P4HI 1YGOA 2NZ7A 1Z6TA 3MOPK 1A1WA 4F42A 1E41A 2DBHA 4I16A 4O9LA 4ZBWA 2N7ZA 4NQKA 4IZAB 2BBZA 2LWDA 2M5VA 2YU0A 2YGSA 2G7RA 2OF5A 2MB9A 3T6PA 1E3YA 2D96A
chains in the Genus database with same CATH topology
2L9MA 1N3KA 2GF5A 1UCPA 2N83A 4O7QA 3LQRA 4JQWA 2NAQA 1DDFA 2DO9A 2O71A 1CY5A 4DWNA 2YQFA 4IZ7B 3CL3A 3MOPA 2LWEA 1WXPA 4RHWE 2OF5H 4JUPA 1ICHA 2P1HA 2DBDA 2YVIA 2MS7A 4A2WA 4IZ5E 3J63A 2F1SA 3LQQA 1C15A 4FH0A 2NSNA 2KM6A 4LWDA 3J6JA 4O6XA 3MOPG 3KATA 1D2ZA 1D2ZB 2L6AA 4M9XA 2MS8A 2A5YB 2KN6A 2IB1A 2DBFA 1NGRA 2B1WA 4F44A 1DGNA 2LS7A 2XV9A 3EZQA 3EZQB 2N00A 4N1JA 2MN4A 4EWIA 1FADA 2MJMA 3YGSP 3YGSC 2HM2Q 2VGQA 4M9SA 4M9ZA 4QOBA 1CWWA 3CRDA 2N97A 4P4HA 1PN5A 2DBGA 1WH4A 2N1FA 2BBRA 1WMGA 2MPCA 4N1KA 4O9FA 4E9MA 1A1ZA 4UZ0A 3QF2A 4N1LA 4D8OA 2A9IA 4A2QA 2N80A 4RHWA 4P4HI 1YGOA 2NZ7A 1Z6TA 3MOPK 1A1WA 4F42A 1E41A 2DBHA 4I16A 4O9LA 4ZBWA 2N7ZA 4NQKA 4IZAB 2BBZA 2LWDA 2M5VA 2YU0A 2YGSA 2G7RA 2OF5A 2MB9A 3T6PA 1E3YA 2D96A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2L9M A;  1N3K A;  2GF5 A;  1UCP A;  2N83 A;  4O7Q A;  3LQR A;  4JQW A;  2NAQ A;  1DDF A;  2DO9 A;  2O71 A;  1CY5 A;  4DWN A;  2YQF A;  4IZ7 B;  3CL3 A;  3MOP A;  2LWE A;  1WXP A;  4RHW E;  2OF5 H;  4JUP A;  1ICH A;  2P1H A;  2DBD A;  2YVI A;  2MS7 A;  4A2W A;  4IZ5 E;  3J63 A;  2F1S A;  3LQQ A;  1C15 A;  4FH0 A;  2NSN A;  2KM6 A;  4LWD A;  3J6J A;  4O6X A;  3MOP G;  3KAT A;  1D2Z A;  1D2Z B;  2L6A A;  4M9X A;  2MS8 A;  2A5Y B;  2KN6 A;  2IB1 A;  2DBF A;  1NGR A;  2B1W A;  4F44 A;  1DGN A;  2LS7 A;  3EZQ A;  3EZQ B;  2N00 A;  4N1J A;  2MN4 A;  4EWI A;  1FAD A;  3YGS P;  3YGS C;  2HM2 Q;  2VGQ A;  4M9S A;  4M9Z A;  4QOB A;  1CWW A;  3CRD A;  2N97 A;  4P4H A;  1PN5 A;  2DBG A;  1WH4 A;  2N1F A;  2BBR A;  1WMG A;  2MPC A;  4N1K A;  4O9F A;  4E9M A;  1A1Z A;  4UZ0 A;  3QF2 A;  4N1L A;  4D8O A;  2A9I A;  4A2Q A;  2N80 A;  4RHW A;  4P4H I;  1YGO A;  2NZ7 A;  1Z6T A;  3MOP K;  1A1W A;  4F42 A;  1E41 A;  2DBH A;  4I16 A;  4O9L A;  4ZBW A;  2N7Z A;  4NQK A;  4IZA B;  2BBZ A;  2LWD A;  2M5V A;  2YU0 A;  2YGS A;  2G7R A;  2OF5 A;  2MB9 A;  3T6P A;  1E3Y A;  2D96 A; 
#chains in the Genus database with same CATH topology
 2L9M A;  1N3K A;  2GF5 A;  1UCP A;  2N83 A;  4O7Q A;  3LQR A;  4JQW A;  2NAQ A;  1DDF A;  2DO9 A;  2O71 A;  1CY5 A;  4DWN A;  2YQF A;  4IZ7 B;  3CL3 A;  3MOP A;  2LWE A;  1WXP A;  4RHW E;  2OF5 H;  4JUP A;  1ICH A;  2P1H A;  2DBD A;  2YVI A;  2MS7 A;  4A2W A;  4IZ5 E;  3J63 A;  2F1S A;  3LQQ A;  1C15 A;  4FH0 A;  2NSN A;  2KM6 A;  4LWD A;  3J6J A;  4O6X A;  3MOP G;  3KAT A;  1D2Z A;  1D2Z B;  2L6A A;  4M9X A;  2MS8 A;  2A5Y B;  2KN6 A;  2IB1 A;  2DBF A;  1NGR A;  2B1W A;  4F44 A;  1DGN A;  2LS7 A;  2XV9 A;  3EZQ A;  3EZQ B;  2N00 A;  4N1J A;  2MN4 A;  4EWI A;  1FAD A;  2MJM A;  3YGS P;  3YGS C;  2HM2 Q;  2VGQ A;  4M9S A;  4M9Z A;  4QOB A;  1CWW A;  3CRD A;  2N97 A;  4P4H A;  1PN5 A;  2DBG A;  1WH4 A;  2N1F A;  2BBR A;  1WMG A;  2MPC A;  4N1K A;  4O9F A;  4E9M A;  1A1Z A;  4UZ0 A;  3QF2 A;  4N1L A;  4D8O A;  2A9I A;  4A2Q A;  2N80 A;  4RHW A;  4P4H I;  1YGO A;  2NZ7 A;  1Z6T A;  3MOP K;  1A1W A;  4F42 A;  1E41 A;  2DBH A;  4I16 A;  4O9L A;  4ZBW A;  2N7Z A;  4NQK A;  4IZA B;  2BBZ A;  2LWD A;  2M5V A;  2YU0 A;  2YGS A;  2G7R A;  2OF5 A;  2MB9 A;  3T6P A;  1E3Y A;  2D96 A; 
#chains in the Genus database with same CATH homology
 2L9M A;  1N3K A;  2GF5 A;  1UCP A;  2N83 A;  4O7Q A;  3LQR A;  4JQW A;  2NAQ A;  1DDF A;  2DO9 A;  2O71 A;  1CY5 A;  4DWN A;  2YQF A;  4IZ7 B;  3CL3 A;  3MOP A;  2LWE A;  1WXP A;  4RHW E;  2OF5 H;  4JUP A;  1ICH A;  2P1H A;  2DBD A;  2YVI A;  2MS7 A;  4A2W A;  4IZ5 E;  3J63 A;  2F1S A;  3LQQ A;  1C15 A;  4FH0 A;  2NSN A;  2KM6 A;  4LWD A;  3J6J A;  4O6X A;  3MOP G;  3KAT A;  1D2Z A;  1D2Z B;  2L6A A;  4M9X A;  2MS8 A;  2A5Y B;  2KN6 A;  2IB1 A;  2DBF A;  1NGR A;  2B1W A;  4F44 A;  1DGN A;  2LS7 A;  2XV9 A;  3EZQ A;  3EZQ B;  2N00 A;  4N1J A;  2MN4 A;  4EWI A;  1FAD A;  2MJM A;  3YGS P;  3YGS C;  2HM2 Q;  2VGQ A;  4M9S A;  4M9Z A;  4QOB A;  1CWW A;  3CRD A;  2N97 A;  4P4H A;  1PN5 A;  2DBG A;  1WH4 A;  2N1F A;  2BBR A;  1WMG A;  2MPC A;  4N1K A;  4O9F A;  4E9M A;  1A1Z A;  4UZ0 A;  3QF2 A;  4N1L A;  4D8O A;  2A9I A;  4A2Q A;  2N80 A;  4RHW A;  4P4H I;  1YGO A;  2NZ7 A;  1Z6T A;  3MOP K;  1A1W A;  4F42 A;  1E41 A;  2DBH A;  4I16 A;  4O9L A;  4ZBW A;  2N7Z A;  4NQK A;  4IZA B;  2BBZ A;  2LWD A;  2M5V A;  2YU0 A;  2YGS A;  2G7R A;  2OF5 A;  2MB9 A;  3T6P A;  1E3Y A;  2D96 A; 
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