1NGRA

Death domain of p75 low affinity neurotrophin receptor, residues 334-418, nmr, 20 structures
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
85
structure length
85
Chain Sequence
GNLYSSLPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEACPVRALLASWGAQDSATLDALLAALRRIQRADIVESLCSE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title NMR structure of the death domain of the p75 neurotrophin receptor.
pubmed doi rcsb
source organism Rattus norvegicus
molecule tags Receptor
molecule keywords P75 LOW AFFINITY NEUROTROPHIN RECEPTOR
total genus 35
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 1997-01-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 1ngrA00
2MN4A 2N80A 2LS7A 3MOPG 4RHWA 2BBRA 2MS7A 2O71A 4F42A 1WXPA 1N3KA 4P4HI 1A1WA 2NAQA 4O9LA 4E9MA 2GF5A 1FADA 4M9ZA 4F44A 1ICHA 1NGRA 1DGNA 1A1ZA 2YU0A 2D96A 4M9XA 1YGOA 2G7RA 3CL3A 4FH0A 2IB1A 4M9SA 1DDFA 2KN6A 2N97A 2LWDA 4N1KA 3KATA 4JUPA 3LQRA 4O9FA 2N1FA 2L6AA 2VGQA 4O6XA 4D8OA 2DO9A 2MPCA 2YQFA 1WMGA 1CWWA 2OF5A 4RHWE 4ZBWA 1E41A 2L9MA 2M5VA 2OF5H 2MB9A 3QF2A 2MS8A 2NSNA 2BBZA 2N00A 1WH4A 4IZ7B 4DWNA 1CY5A 1D2ZA 4NQKA 2A5YB 1E3YA 4O7QA 2P1HA 4JQWA 4A2WA 2DBDA 3YGSP 2DBHA 3MOPA 4EWIA 2KM6A 4P4HA 3J63A 2YGSA 3J6JA 2NZ7A 3CRDA 4QOBA 2DBFA 3LQQA 2B1WA 2DBGA 2N7ZA 4IZ5E 4IZAB 4N1JA 3EZQA 4N1LA 1Z6TA 2HM2Q 1C15A 2N83A 3T6PA 2A9IA 4A2QA 1D2ZB 3MOPK 4I16A 4LWDA 3YGSC 2F1SA 1UCPA 2LWEA 4UZ0A 1PN5A 2YVIA 3EZQB
chains in the Genus database with same CATH superfamily
2MN4A 2N80A 2LS7A 3MOPG 4RHWA 2BBRA 2MS7A 2O71A 4F42A 1WXPA 1N3KA 4P4HI 1A1WA 2NAQA 4O9LA 4E9MA 2GF5A 1FADA 4M9ZA 4F44A 1ICHA 1NGRA 1DGNA 1A1ZA 2YU0A 2D96A 4M9XA 1YGOA 2G7RA 3CL3A 4FH0A 2IB1A 4M9SA 1DDFA 2KN6A 2N97A 2LWDA 4N1KA 3KATA 4JUPA 3LQRA 4O9FA 2N1FA 2L6AA 2VGQA 4O6XA 4D8OA 2DO9A 2MPCA 2YQFA 1WMGA 1CWWA 2OF5A 4RHWE 4ZBWA 1E41A 2L9MA 2M5VA 2OF5H 2MB9A 3QF2A 2MS8A 2NSNA 2BBZA 2N00A 1WH4A 4IZ7B 4DWNA 2XV9A 1CY5A 1D2ZA 4NQKA 2A5YB 1E3YA 4O7QA 2P1HA 4JQWA 4A2WA 2DBDA 3YGSP 2DBHA 3MOPA 4EWIA 2KM6A 4P4HA 3J63A 2YGSA 3J6JA 2NZ7A 3CRDA 4QOBA 2DBFA 3LQQA 2B1WA 2DBGA 2N7ZA 4IZ5E 4IZAB 4N1JA 3EZQA 4N1LA 1Z6TA 2HM2Q 1C15A 2N83A 3T6PA 2A9IA 4A2QA 1D2ZB 3MOPK 4I16A 4LWDA 3YGSC 2F1SA 1UCPA 2LWEA 4UZ0A 1PN5A 2YVIA 2MJMA 3EZQB
chains in the Genus database with same CATH topology
2MN4A 2N80A 2LS7A 3MOPG 4RHWA 2BBRA 2MS7A 2O71A 4F42A 1WXPA 1N3KA 4P4HI 1A1WA 2NAQA 4O9LA 4E9MA 2GF5A 1FADA 4M9ZA 4F44A 1ICHA 1NGRA 1DGNA 1A1ZA 2YU0A 2D96A 4M9XA 1YGOA 2G7RA 3CL3A 4FH0A 2IB1A 4M9SA 1DDFA 2KN6A 2N97A 2LWDA 4N1KA 3KATA 4JUPA 3LQRA 4O9FA 2N1FA 2L6AA 2VGQA 4O6XA 4D8OA 2DO9A 2MPCA 2YQFA 1WMGA 1CWWA 2OF5A 4RHWE 4ZBWA 1E41A 2L9MA 2M5VA 2OF5H 2MB9A 3QF2A 2MS8A 2NSNA 2BBZA 2N00A 1WH4A 4IZ7B 4DWNA 2XV9A 1CY5A 1D2ZA 4NQKA 2A5YB 1E3YA 4O7QA 2P1HA 4JQWA 4A2WA 2DBDA 3YGSP 2DBHA 3MOPA 4EWIA 2KM6A 4P4HA 3J63A 2YGSA 3J6JA 2NZ7A 3CRDA 4QOBA 2DBFA 3LQQA 2B1WA 2DBGA 2N7ZA 4IZ5E 4IZAB 4N1JA 3EZQA 4N1LA 1Z6TA 2HM2Q 1C15A 2N83A 3T6PA 2A9IA 4A2QA 1D2ZB 3MOPK 4I16A 4LWDA 3YGSC 2F1SA 1UCPA 2LWEA 4UZ0A 1PN5A 2YVIA 2MJMA 3EZQB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MN4 A;  2N80 A;  2LS7 A;  3MOP G;  4RHW A;  2BBR A;  2MS7 A;  2O71 A;  4F42 A;  1WXP A;  1N3K A;  4P4H I;  1A1W A;  2NAQ A;  4O9L A;  4E9M A;  2GF5 A;  1FAD A;  4M9Z A;  4F44 A;  1ICH A;  1NGR A;  1DGN A;  1A1Z A;  2YU0 A;  2D96 A;  4M9X A;  1YGO A;  2G7R A;  3CL3 A;  4FH0 A;  2IB1 A;  4M9S A;  1DDF A;  2KN6 A;  2N97 A;  2LWD A;  4N1K A;  3KAT A;  4JUP A;  3LQR A;  4O9F A;  2N1F A;  2L6A A;  2VGQ A;  4O6X A;  4D8O A;  2DO9 A;  2MPC A;  2YQF A;  1WMG A;  1CWW A;  2OF5 A;  4RHW E;  4ZBW A;  1E41 A;  2L9M A;  2M5V A;  2OF5 H;  2MB9 A;  3QF2 A;  2MS8 A;  2NSN A;  2BBZ A;  2N00 A;  1WH4 A;  4IZ7 B;  4DWN A;  1CY5 A;  1D2Z A;  4NQK A;  2A5Y B;  1E3Y A;  4O7Q A;  2P1H A;  4JQW A;  4A2W A;  2DBD A;  3YGS P;  2DBH A;  3MOP A;  4EWI A;  2KM6 A;  4P4H A;  3J63 A;  2YGS A;  3J6J A;  2NZ7 A;  3CRD A;  4QOB A;  2DBF A;  3LQQ A;  2B1W A;  2DBG A;  2N7Z A;  4IZ5 E;  4IZA B;  4N1J A;  3EZQ A;  4N1L A;  1Z6T A;  2HM2 Q;  1C15 A;  2N83 A;  3T6P A;  2A9I A;  4A2Q A;  1D2Z B;  3MOP K;  4I16 A;  4LWD A;  3YGS C;  2F1S A;  1UCP A;  2LWE A;  4UZ0 A;  1PN5 A;  2YVI A;  3EZQ B; 
#chains in the Genus database with same CATH topology
 2MN4 A;  2N80 A;  2LS7 A;  3MOP G;  4RHW A;  2BBR A;  2MS7 A;  2O71 A;  4F42 A;  1WXP A;  1N3K A;  4P4H I;  1A1W A;  2NAQ A;  4O9L A;  4E9M A;  2GF5 A;  1FAD A;  4M9Z A;  4F44 A;  1ICH A;  1NGR A;  1DGN A;  1A1Z A;  2YU0 A;  2D96 A;  4M9X A;  1YGO A;  2G7R A;  3CL3 A;  4FH0 A;  2IB1 A;  4M9S A;  1DDF A;  2KN6 A;  2N97 A;  2LWD A;  4N1K A;  3KAT A;  4JUP A;  3LQR A;  4O9F A;  2N1F A;  2L6A A;  2VGQ A;  4O6X A;  4D8O A;  2DO9 A;  2MPC A;  2YQF A;  1WMG A;  1CWW A;  2OF5 A;  4RHW E;  4ZBW A;  1E41 A;  2L9M A;  2M5V A;  2OF5 H;  2MB9 A;  3QF2 A;  2MS8 A;  2NSN A;  2BBZ A;  2N00 A;  1WH4 A;  4IZ7 B;  4DWN A;  2XV9 A;  1CY5 A;  1D2Z A;  4NQK A;  2A5Y B;  1E3Y A;  4O7Q A;  2P1H A;  4JQW A;  4A2W A;  2DBD A;  3YGS P;  2DBH A;  3MOP A;  4EWI A;  2KM6 A;  4P4H A;  3J63 A;  2YGS A;  3J6J A;  2NZ7 A;  3CRD A;  4QOB A;  2DBF A;  3LQQ A;  2B1W A;  2DBG A;  2N7Z A;  4IZ5 E;  4IZA B;  4N1J A;  3EZQ A;  4N1L A;  1Z6T A;  2HM2 Q;  1C15 A;  2N83 A;  3T6P A;  2A9I A;  4A2Q A;  1D2Z B;  3MOP K;  4I16 A;  4LWD A;  3YGS C;  2F1S A;  1UCP A;  2LWE A;  4UZ0 A;  1PN5 A;  2YVI A;  2MJM A;  3EZQ B; 
#chains in the Genus database with same CATH homology
 2MN4 A;  2N80 A;  2LS7 A;  3MOP G;  4RHW A;  2BBR A;  2MS7 A;  2O71 A;  4F42 A;  1WXP A;  1N3K A;  4P4H I;  1A1W A;  2NAQ A;  4O9L A;  4E9M A;  2GF5 A;  1FAD A;  4M9Z A;  4F44 A;  1ICH A;  1NGR A;  1DGN A;  1A1Z A;  2YU0 A;  2D96 A;  4M9X A;  1YGO A;  2G7R A;  3CL3 A;  4FH0 A;  2IB1 A;  4M9S A;  1DDF A;  2KN6 A;  2N97 A;  2LWD A;  4N1K A;  3KAT A;  4JUP A;  3LQR A;  4O9F A;  2N1F A;  2L6A A;  2VGQ A;  4O6X A;  4D8O A;  2DO9 A;  2MPC A;  2YQF A;  1WMG A;  1CWW A;  2OF5 A;  4RHW E;  4ZBW A;  1E41 A;  2L9M A;  2M5V A;  2OF5 H;  2MB9 A;  3QF2 A;  2MS8 A;  2NSN A;  2BBZ A;  2N00 A;  1WH4 A;  4IZ7 B;  4DWN A;  2XV9 A;  1CY5 A;  1D2Z A;  4NQK A;  2A5Y B;  1E3Y A;  4O7Q A;  2P1H A;  4JQW A;  4A2W A;  2DBD A;  3YGS P;  2DBH A;  3MOP A;  4EWI A;  2KM6 A;  4P4H A;  3J63 A;  2YGS A;  3J6J A;  2NZ7 A;  3CRD A;  4QOB A;  2DBF A;  3LQQ A;  2B1W A;  2DBG A;  2N7Z A;  4IZ5 E;  4IZA B;  4N1J A;  3EZQ A;  4N1L A;  1Z6T A;  2HM2 Q;  1C15 A;  2N83 A;  3T6P A;  2A9I A;  4A2Q A;  1D2Z B;  3MOP K;  4I16 A;  4LWD A;  3YGS C;  2F1S A;  1UCP A;  2LWE A;  4UZ0 A;  1PN5 A;  2YVI A;  2MJM A;  3EZQ B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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