1D2ZA

Three-dimensional structure of a complex between the death domains of pelle and tube
Total Genus 38

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
102
structure length
102
Chain Sequence
LDNTMAIRLLPLPVRAQLCAHLDALDVWQQLATAVKLYPDQVEQISSQKQRGRSASNEFLNIWGGQYNHTVQTLFALFKKLKLHNAMRLIKDYVSEDLHKYI

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (39-52)AH3 (66-78)AH2 (54-62)AH4 (82-94)EMPTYAH5 (98-108)3H1 (34-36)Updating...
connected with : NaN
molecule tags Apoptosis
source organism Drosophila melanogaster
publication title Three-dimensional structure of a complex between the death domains of Pelle and Tube.
pubmed doi rcsb
molecule keywords DEATH DOMAIN OF PELLE
total genus 38
structure length 102
sequence length 102
chains with identical sequence C
ec nomenclature ec 2.7.11.1: Non-specific serine/threonine protein kinase.
pdb deposition date 1999-09-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00531 Death Death domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 1d2zA00
4RHWA 4P4HA 4O9FA 4FH0A 1C15A 4QOBA 3KATA 2M5VA 2NSNA 4UZ0A 2OF5A 3T6PA 2OF5H 2VGQA 2G7RA 4M9ZA 3YGSP 1DDFA 1E3YA 4A2QA 2P1HA 2DBFA 2LS7A 2LWEA 1WH4A 2KN6A 3J63A 4ZBWA 4RHWE 4IZ5E 2KM6A 2DBDA 3CRDA 2L9MA 1DGNA 1D2ZB 4LWDA 1E41A 2DBHA 2A5YB 2BBRA 1CWWA 4NQKA 4D8OA 1CY5A 4IZ7B 1YGOA 3LQRA 4F44A 4E9MA 2N83A 2N1FA 3MOPG 2IB1A 4O6XA 2L6AA 2B1WA 3EZQA 3MOPA 2MS8A 1Z6TA 4P4HI 2D96A 3MOPK 2O71A 1FADA 2F1SA 2BBZA 2N80A 2N00A 4JQWA 1N3KA 4A2WA 2MN4A 2N97A 4N1JA 1ICHA 1WMGA 2YVIA 4IZAB 4I16A 2MB9A 4M9SA 2GF5A 4N1LA 2YQFA 2NZ7A 2N7ZA 3QF2A 2LWDA 1WXPA 2YGSA 4O7QA 1UCPA 2YU0A 4O9LA 3J6JA 4DWNA 2MS7A 1D2ZA 2NAQA 2A9IA 2DO9A 3YGSC 3CL3A 2MPCA 1NGRA 1A1WA 4EWIA 4M9XA 4N1KA 3LQQA 1PN5A 2DBGA 4JUPA 4F42A 3EZQB 1A1ZA 2HM2Q
chains in the Genus database with same CATH superfamily
4RHWA 4P4HA 4O9FA 2XV9A 4FH0A 1C15A 4QOBA 3KATA 2M5VA 2NSNA 4UZ0A 2OF5A 3T6PA 2OF5H 2VGQA 2G7RA 4M9ZA 3YGSP 1DDFA 1E3YA 4A2QA 2P1HA 2DBFA 2LS7A 2LWEA 1WH4A 2KN6A 3J63A 4ZBWA 4RHWE 4IZ5E 2KM6A 2DBDA 3CRDA 2L9MA 1DGNA 1D2ZB 4LWDA 1E41A 2DBHA 2A5YB 2BBRA 1CWWA 4NQKA 4D8OA 1CY5A 4IZ7B 1YGOA 3LQRA 4F44A 4E9MA 2N83A 2N1FA 3MOPG 2IB1A 4O6XA 2L6AA 2B1WA 3EZQA 3MOPA 2MS8A 1Z6TA 4P4HI 2D96A 3MOPK 2O71A 1FADA 2F1SA 2BBZA 2N80A 2N00A 4JQWA 1N3KA 4A2WA 2MN4A 2N97A 4N1JA 1ICHA 1WMGA 2YVIA 4IZAB 4I16A 2MB9A 4M9SA 2GF5A 4N1LA 2YQFA 2NZ7A 2N7ZA 3QF2A 2LWDA 1WXPA 2YGSA 4O7QA 1UCPA 2YU0A 4O9LA 3J6JA 4DWNA 2MS7A 1D2ZA 2NAQA 2A9IA 2DO9A 3YGSC 3CL3A 2MPCA 1NGRA 1A1WA 4EWIA 4M9XA 4N1KA 3LQQA 1PN5A 2DBGA 4JUPA 4F42A 3EZQB 2MJMA 1A1ZA 2HM2Q
chains in the Genus database with same CATH topology
4RHWA 4P4HA 4O9FA 2XV9A 4FH0A 1C15A 4QOBA 3KATA 2M5VA 2NSNA 4UZ0A 2OF5A 3T6PA 2OF5H 2VGQA 2G7RA 4M9ZA 3YGSP 1DDFA 1E3YA 4A2QA 2P1HA 2DBFA 2LS7A 2LWEA 1WH4A 2KN6A 3J63A 4ZBWA 4RHWE 4IZ5E 2KM6A 2DBDA 3CRDA 2L9MA 1DGNA 1D2ZB 4LWDA 1E41A 2DBHA 2A5YB 2BBRA 1CWWA 4NQKA 4D8OA 1CY5A 4IZ7B 1YGOA 3LQRA 4F44A 4E9MA 2N83A 2N1FA 3MOPG 2IB1A 4O6XA 2L6AA 2B1WA 3EZQA 3MOPA 2MS8A 1Z6TA 4P4HI 2D96A 3MOPK 2O71A 1FADA 2F1SA 2BBZA 2N80A 2N00A 4JQWA 1N3KA 4A2WA 2MN4A 2N97A 4N1JA 1ICHA 1WMGA 2YVIA 4IZAB 4I16A 2MB9A 4M9SA 2GF5A 4N1LA 2YQFA 2NZ7A 2N7ZA 3QF2A 2LWDA 1WXPA 2YGSA 4O7QA 1UCPA 2YU0A 4O9LA 3J6JA 4DWNA 2MS7A 1D2ZA 2NAQA 2A9IA 2DO9A 3YGSC 3CL3A 2MPCA 1NGRA 1A1WA 4EWIA 4M9XA 4N1KA 3LQQA 1PN5A 2DBGA 4JUPA 4F42A 3EZQB 2MJMA 1A1ZA 2HM2Q
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RHW A;  4P4H A;  4O9F A;  4FH0 A;  1C15 A;  4QOB A;  3KAT A;  2M5V A;  2NSN A;  4UZ0 A;  2OF5 A;  3T6P A;  2OF5 H;  2VGQ A;  2G7R A;  4M9Z A;  3YGS P;  1DDF A;  1E3Y A;  4A2Q A;  2P1H A;  2DBF A;  2LS7 A;  2LWE A;  1WH4 A;  2KN6 A;  3J63 A;  4ZBW A;  4RHW E;  4IZ5 E;  2KM6 A;  2DBD A;  3CRD A;  2L9M A;  1DGN A;  1D2Z B;  4LWD A;  1E41 A;  2DBH A;  2A5Y B;  2BBR A;  1CWW A;  4NQK A;  4D8O A;  1CY5 A;  4IZ7 B;  1YGO A;  3LQR A;  4F44 A;  4E9M A;  2N83 A;  2N1F A;  3MOP G;  2IB1 A;  4O6X A;  2L6A A;  2B1W A;  3EZQ A;  3MOP A;  2MS8 A;  1Z6T A;  4P4H I;  2D96 A;  3MOP K;  2O71 A;  1FAD A;  2F1S A;  2BBZ A;  2N80 A;  2N00 A;  4JQW A;  1N3K A;  4A2W A;  2MN4 A;  2N97 A;  4N1J A;  1ICH A;  1WMG A;  2YVI A;  4IZA B;  4I16 A;  2MB9 A;  4M9S A;  2GF5 A;  4N1L A;  2YQF A;  2NZ7 A;  2N7Z A;  3QF2 A;  2LWD A;  1WXP A;  2YGS A;  4O7Q A;  1UCP A;  2YU0 A;  4O9L A;  3J6J A;  4DWN A;  2MS7 A;  1D2Z A;  2NAQ A;  2A9I A;  2DO9 A;  3YGS C;  3CL3 A;  2MPC A;  1NGR A;  1A1W A;  4EWI A;  4M9X A;  4N1K A;  3LQQ A;  1PN5 A;  2DBG A;  4JUP A;  4F42 A;  3EZQ B;  1A1Z A;  2HM2 Q; 
#chains in the Genus database with same CATH topology
 4RHW A;  4P4H A;  4O9F A;  2XV9 A;  4FH0 A;  1C15 A;  4QOB A;  3KAT A;  2M5V A;  2NSN A;  4UZ0 A;  2OF5 A;  3T6P A;  2OF5 H;  2VGQ A;  2G7R A;  4M9Z A;  3YGS P;  1DDF A;  1E3Y A;  4A2Q A;  2P1H A;  2DBF A;  2LS7 A;  2LWE A;  1WH4 A;  2KN6 A;  3J63 A;  4ZBW A;  4RHW E;  4IZ5 E;  2KM6 A;  2DBD A;  3CRD A;  2L9M A;  1DGN A;  1D2Z B;  4LWD A;  1E41 A;  2DBH A;  2A5Y B;  2BBR A;  1CWW A;  4NQK A;  4D8O A;  1CY5 A;  4IZ7 B;  1YGO A;  3LQR A;  4F44 A;  4E9M A;  2N83 A;  2N1F A;  3MOP G;  2IB1 A;  4O6X A;  2L6A A;  2B1W A;  3EZQ A;  3MOP A;  2MS8 A;  1Z6T A;  4P4H I;  2D96 A;  3MOP K;  2O71 A;  1FAD A;  2F1S A;  2BBZ A;  2N80 A;  2N00 A;  4JQW A;  1N3K A;  4A2W A;  2MN4 A;  2N97 A;  4N1J A;  1ICH A;  1WMG A;  2YVI A;  4IZA B;  4I16 A;  2MB9 A;  4M9S A;  2GF5 A;  4N1L A;  2YQF A;  2NZ7 A;  2N7Z A;  3QF2 A;  2LWD A;  1WXP A;  2YGS A;  4O7Q A;  1UCP A;  2YU0 A;  4O9L A;  3J6J A;  4DWN A;  2MS7 A;  1D2Z A;  2NAQ A;  2A9I A;  2DO9 A;  3YGS C;  3CL3 A;  2MPC A;  1NGR A;  1A1W A;  4EWI A;  4M9X A;  4N1K A;  3LQQ A;  1PN5 A;  2DBG A;  4JUP A;  4F42 A;  3EZQ B;  2MJM A;  1A1Z A;  2HM2 Q; 
#chains in the Genus database with same CATH homology
 4RHW A;  4P4H A;  4O9F A;  2XV9 A;  4FH0 A;  1C15 A;  4QOB A;  3KAT A;  2M5V A;  2NSN A;  4UZ0 A;  2OF5 A;  3T6P A;  2OF5 H;  2VGQ A;  2G7R A;  4M9Z A;  3YGS P;  1DDF A;  1E3Y A;  4A2Q A;  2P1H A;  2DBF A;  2LS7 A;  2LWE A;  1WH4 A;  2KN6 A;  3J63 A;  4ZBW A;  4RHW E;  4IZ5 E;  2KM6 A;  2DBD A;  3CRD A;  2L9M A;  1DGN A;  1D2Z B;  4LWD A;  1E41 A;  2DBH A;  2A5Y B;  2BBR A;  1CWW A;  4NQK A;  4D8O A;  1CY5 A;  4IZ7 B;  1YGO A;  3LQR A;  4F44 A;  4E9M A;  2N83 A;  2N1F A;  3MOP G;  2IB1 A;  4O6X A;  2L6A A;  2B1W A;  3EZQ A;  3MOP A;  2MS8 A;  1Z6T A;  4P4H I;  2D96 A;  3MOP K;  2O71 A;  1FAD A;  2F1S A;  2BBZ A;  2N80 A;  2N00 A;  4JQW A;  1N3K A;  4A2W A;  2MN4 A;  2N97 A;  4N1J A;  1ICH A;  1WMG A;  2YVI A;  4IZA B;  4I16 A;  2MB9 A;  4M9S A;  2GF5 A;  4N1L A;  2YQF A;  2NZ7 A;  2N7Z A;  3QF2 A;  2LWD A;  1WXP A;  2YGS A;  4O7Q A;  1UCP A;  2YU0 A;  4O9L A;  3J6J A;  4DWN A;  2MS7 A;  1D2Z A;  2NAQ A;  2A9I A;  2DO9 A;  3YGS C;  3CL3 A;  2MPC A;  1NGR A;  1A1W A;  4EWI A;  4M9X A;  4N1K A;  3LQQ A;  1PN5 A;  2DBG A;  4JUP A;  4F42 A;  3EZQ B;  2MJM A;  1A1Z A;  2HM2 Q; 
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