1DDFA

Fas death domain, nmr, minimized average structure
Total Genus 24

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
24
sequence length
127
structure length
127
Chain Sequence
METVAINLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLEHHHHHH

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Death domain
source organism Homo sapiens
publication title NMR structure and mutagenesis of the Fas (APO-1/CD95) death domain.
pubmed doi rcsb
molecule keywords FAS
total genus 24
structure length 127
sequence length 127
ec nomenclature
pdb deposition date 1996-11-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00531 Death Death domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 1ddfA00
3YGSP 4P4HI 2NZ7A 4ZBWA 2KM6A 2DBHA 4UZ0A 4D8OA 1YGOA 1N3KA 2P1HA 1ICHA 1CWWA 4IZAB 2LWEA 2DBGA 2N7ZA 4A2QA 2D96A 2N1FA 2M5VA 3EZQB 2MN4A 3MOPK 1Z6TA 3CRDA 4EWIA 4LWDA 2OF5H 3MOPA 2MB9A 2MPCA 2N80A 4M9XA 2L6AA 2YU0A 2NAQA 3LQRA 4JUPA 1UCPA 4M9SA 2DBFA 4O7QA 4QOBA 2YQFA 3T6PA 1NGRA 1A1WA 1CY5A 1D2ZA 1DDFA 4F44A 4JQWA 4N1KA 2LWDA 2N00A 4O9LA 1WXPA 1C15A 2KN6A 2L9MA 2A9IA 4O6XA 3MOPG 2MS7A 3CL3A 4IZ7B 2IB1A 4E9MA 4NQKA 4I16A 2DBDA 1A1ZA 1E3YA 2VGQA 3KATA 2YVIA 3QF2A 1FADA 3J63A 2N97A 3EZQA 2F1SA 2HM2Q 2OF5A 2BBZA 1E41A 3LQQA 4N1JA 2G7RA 2A5YB 2MS8A 2N83A 2LS7A 2NSNA 3YGSC 1DGNA 1WMGA 4F42A 2YGSA 1WH4A 2B1WA 3J6JA 4IZ5E 4DWNA 4A2WA 2DO9A 4M9ZA 1D2ZB 4N1LA 4RHWE 2GF5A 4P4HA 4O9FA 2O71A 1PN5A 2BBRA 4FH0A 4RHWA
chains in the Genus database with same CATH superfamily
3YGSP 4P4HI 2NZ7A 4ZBWA 2KM6A 2DBHA 4UZ0A 4D8OA 1YGOA 1N3KA 2P1HA 1ICHA 1CWWA 4IZAB 2LWEA 2DBGA 2N7ZA 4A2QA 2D96A 2N1FA 2M5VA 3EZQB 2MN4A 3MOPK 1Z6TA 3CRDA 4EWIA 4LWDA 2OF5H 3MOPA 2MB9A 2MPCA 2N80A 4M9XA 2L6AA 2YU0A 2NAQA 3LQRA 4JUPA 2MJMA 1UCPA 4M9SA 2DBFA 4O7QA 4QOBA 2YQFA 3T6PA 1NGRA 1A1WA 1CY5A 1D2ZA 1DDFA 4F44A 4JQWA 4N1KA 2LWDA 2N00A 2XV9A 1WXPA 4O9LA 1C15A 2KN6A 2L9MA 2A9IA 4O6XA 3MOPG 2MS7A 3CL3A 4IZ7B 2IB1A 4E9MA 4NQKA 4I16A 2DBDA 1A1ZA 1E3YA 2VGQA 3KATA 2YVIA 3QF2A 1FADA 3J63A 2N97A 3EZQA 2F1SA 2HM2Q 2OF5A 2BBZA 1E41A 3LQQA 4N1JA 2G7RA 2A5YB 2MS8A 2N83A 2LS7A 2NSNA 3YGSC 1DGNA 1WMGA 4F42A 2YGSA 1WH4A 2B1WA 3J6JA 4IZ5E 4DWNA 4A2WA 2DO9A 4M9ZA 1D2ZB 4N1LA 4RHWE 2GF5A 4P4HA 4O9FA 2O71A 1PN5A 2BBRA 4FH0A 4RHWA
chains in the Genus database with same CATH topology
3YGSP 4P4HI 2NZ7A 4ZBWA 2KM6A 2DBHA 4UZ0A 4D8OA 1YGOA 1N3KA 2P1HA 1ICHA 1CWWA 4IZAB 2LWEA 2DBGA 2N7ZA 4A2QA 2D96A 2N1FA 2M5VA 3EZQB 2MN4A 3MOPK 1Z6TA 3CRDA 4EWIA 4LWDA 2OF5H 3MOPA 2MB9A 2MPCA 2N80A 4M9XA 2L6AA 2YU0A 2NAQA 3LQRA 4JUPA 2MJMA 1UCPA 4M9SA 2DBFA 4O7QA 4QOBA 2YQFA 3T6PA 1NGRA 1A1WA 1CY5A 1D2ZA 1DDFA 4F44A 4JQWA 4N1KA 2LWDA 2N00A 2XV9A 1WXPA 4O9LA 1C15A 2KN6A 2L9MA 2A9IA 4O6XA 3MOPG 2MS7A 3CL3A 4IZ7B 2IB1A 4E9MA 4NQKA 4I16A 2DBDA 1A1ZA 1E3YA 2VGQA 3KATA 2YVIA 3QF2A 1FADA 3J63A 2N97A 3EZQA 2F1SA 2HM2Q 2OF5A 2BBZA 1E41A 3LQQA 4N1JA 2G7RA 2A5YB 2MS8A 2N83A 2LS7A 2NSNA 3YGSC 1DGNA 1WMGA 4F42A 2YGSA 1WH4A 2B1WA 3J6JA 4IZ5E 4DWNA 4A2WA 2DO9A 4M9ZA 1D2ZB 4N1LA 4RHWE 2GF5A 4P4HA 4O9FA 2O71A 1PN5A 2BBRA 4FH0A 4RHWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3YGS P;  4P4H I;  2NZ7 A;  4ZBW A;  2KM6 A;  2DBH A;  4UZ0 A;  4D8O A;  1YGO A;  1N3K A;  2P1H A;  1ICH A;  1CWW A;  4IZA B;  2LWE A;  2DBG A;  2N7Z A;  4A2Q A;  2D96 A;  2N1F A;  2M5V A;  3EZQ B;  2MN4 A;  3MOP K;  1Z6T A;  3CRD A;  4EWI A;  4LWD A;  2OF5 H;  3MOP A;  2MB9 A;  2MPC A;  2N80 A;  4M9X A;  2L6A A;  2YU0 A;  2NAQ A;  3LQR A;  4JUP A;  1UCP A;  4M9S A;  2DBF A;  4O7Q A;  4QOB A;  2YQF A;  3T6P A;  1NGR A;  1A1W A;  1CY5 A;  1D2Z A;  1DDF A;  4F44 A;  4JQW A;  4N1K A;  2LWD A;  2N00 A;  4O9L A;  1WXP A;  1C15 A;  2KN6 A;  2L9M A;  2A9I A;  4O6X A;  3MOP G;  2MS7 A;  3CL3 A;  4IZ7 B;  2IB1 A;  4E9M A;  4NQK A;  4I16 A;  2DBD A;  1A1Z A;  1E3Y A;  2VGQ A;  3KAT A;  2YVI A;  3QF2 A;  1FAD A;  3J63 A;  2N97 A;  3EZQ A;  2F1S A;  2HM2 Q;  2OF5 A;  2BBZ A;  1E41 A;  3LQQ A;  4N1J A;  2G7R A;  2A5Y B;  2MS8 A;  2N83 A;  2LS7 A;  2NSN A;  3YGS C;  1DGN A;  1WMG A;  4F42 A;  2YGS A;  1WH4 A;  2B1W A;  3J6J A;  4IZ5 E;  4DWN A;  4A2W A;  2DO9 A;  4M9Z A;  1D2Z B;  4N1L A;  4RHW E;  2GF5 A;  4P4H A;  4O9F A;  2O71 A;  1PN5 A;  2BBR A;  4FH0 A;  4RHW A; 
#chains in the Genus database with same CATH topology
 3YGS P;  4P4H I;  2NZ7 A;  4ZBW A;  2KM6 A;  2DBH A;  4UZ0 A;  4D8O A;  1YGO A;  1N3K A;  2P1H A;  1ICH A;  1CWW A;  4IZA B;  2LWE A;  2DBG A;  2N7Z A;  4A2Q A;  2D96 A;  2N1F A;  2M5V A;  3EZQ B;  2MN4 A;  3MOP K;  1Z6T A;  3CRD A;  4EWI A;  4LWD A;  2OF5 H;  3MOP A;  2MB9 A;  2MPC A;  2N80 A;  4M9X A;  2L6A A;  2YU0 A;  2NAQ A;  3LQR A;  4JUP A;  2MJM A;  1UCP A;  4M9S A;  2DBF A;  4O7Q A;  4QOB A;  2YQF A;  3T6P A;  1NGR A;  1A1W A;  1CY5 A;  1D2Z A;  1DDF A;  4F44 A;  4JQW A;  4N1K A;  2LWD A;  2N00 A;  2XV9 A;  1WXP A;  4O9L A;  1C15 A;  2KN6 A;  2L9M A;  2A9I A;  4O6X A;  3MOP G;  2MS7 A;  3CL3 A;  4IZ7 B;  2IB1 A;  4E9M A;  4NQK A;  4I16 A;  2DBD A;  1A1Z A;  1E3Y A;  2VGQ A;  3KAT A;  2YVI A;  3QF2 A;  1FAD A;  3J63 A;  2N97 A;  3EZQ A;  2F1S A;  2HM2 Q;  2OF5 A;  2BBZ A;  1E41 A;  3LQQ A;  4N1J A;  2G7R A;  2A5Y B;  2MS8 A;  2N83 A;  2LS7 A;  2NSN A;  3YGS C;  1DGN A;  1WMG A;  4F42 A;  2YGS A;  1WH4 A;  2B1W A;  3J6J A;  4IZ5 E;  4DWN A;  4A2W A;  2DO9 A;  4M9Z A;  1D2Z B;  4N1L A;  4RHW E;  2GF5 A;  4P4H A;  4O9F A;  2O71 A;  1PN5 A;  2BBR A;  4FH0 A;  4RHW A; 
#chains in the Genus database with same CATH homology
 3YGS P;  4P4H I;  2NZ7 A;  4ZBW A;  2KM6 A;  2DBH A;  4UZ0 A;  4D8O A;  1YGO A;  1N3K A;  2P1H A;  1ICH A;  1CWW A;  4IZA B;  2LWE A;  2DBG A;  2N7Z A;  4A2Q A;  2D96 A;  2N1F A;  2M5V A;  3EZQ B;  2MN4 A;  3MOP K;  1Z6T A;  3CRD A;  4EWI A;  4LWD A;  2OF5 H;  3MOP A;  2MB9 A;  2MPC A;  2N80 A;  4M9X A;  2L6A A;  2YU0 A;  2NAQ A;  3LQR A;  4JUP A;  2MJM A;  1UCP A;  4M9S A;  2DBF A;  4O7Q A;  4QOB A;  2YQF A;  3T6P A;  1NGR A;  1A1W A;  1CY5 A;  1D2Z A;  1DDF A;  4F44 A;  4JQW A;  4N1K A;  2LWD A;  2N00 A;  2XV9 A;  1WXP A;  4O9L A;  1C15 A;  2KN6 A;  2L9M A;  2A9I A;  4O6X A;  3MOP G;  2MS7 A;  3CL3 A;  4IZ7 B;  2IB1 A;  4E9M A;  4NQK A;  4I16 A;  2DBD A;  1A1Z A;  1E3Y A;  2VGQ A;  3KAT A;  2YVI A;  3QF2 A;  1FAD A;  3J63 A;  2N97 A;  3EZQ A;  2F1S A;  2HM2 Q;  2OF5 A;  2BBZ A;  1E41 A;  3LQQ A;  4N1J A;  2G7R A;  2A5Y B;  2MS8 A;  2N83 A;  2LS7 A;  2NSN A;  3YGS C;  1DGN A;  1WMG A;  4F42 A;  2YGS A;  1WH4 A;  2B1W A;  3J6J A;  4IZ5 E;  4DWN A;  4A2W A;  2DO9 A;  4M9Z A;  1D2Z B;  4N1L A;  4RHW E;  2GF5 A;  4P4H A;  4O9F A;  2O71 A;  1PN5 A;  2BBR A;  4FH0 A;  4RHW A; 
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