2MS7A

High-resolution solid-state nmr structure of the helical signal transduction filament mavs card
Total Genus 26

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
26
sequence length
102
structure length
102
Chain Sequence
GSMPFAEDKTYKYICRNFSNFCNVDVVEILPYLPCLTARDQDRLRATCTLSGNRDTLWHLFNTLQRRPGWVEYFIAALRGCELVDLADEVASVYQSYQPRTS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (16-18)TI1 (18-21)3H2 (24-27)TIV2 (31-34)TIV1 (27-30)AH4 (68-78)EMPTYAH5 (82-94)AH1 (3-15)AH2 (36-48)AH3 (51-62)O1 (80-82)Updating...
connected with : NaN
molecule tags Protein binding
source organism Homo sapiens
publication title Structure determination of helical filaments by solid-state NMR spectroscopy.
pubmed doi rcsb
molecule keywords Mitochondrial antiviral-signaling protein
total genus 26
structure length 102
sequence length 102
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U
ec nomenclature
pdb deposition date 2014-07-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF16739 CARD_2 Caspase recruitment domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 2ms7A00
2N00A 1A1ZA 3MOPA 4O9LA 2MN4A 3YGSP 1UCPA 1YGOA 2N80A 1CWWA 1WH4A 4I16A 4A2WA 4N1LA 4RHWA 4F44A 2O71A 1DDFA 1ICHA 2P1HA 3LQRA 4UZ0A 4ZBWA 2N1FA 4O6XA 4JUPA 4EWIA 2M5VA 2DBGA 2BBRA 4N1KA 3EZQA 1D2ZA 3CRDA 1WXPA 2GF5A 2YGSA 3KATA 2MS8A 4IZAB 2DBFA 2VGQA 2LS7A 2F1SA 2G7RA 2NSNA 2N83A 3J6JA 4M9XA 4QOBA 1WMGA 2MPCA 4IZ5E 2D96A 1DGNA 2L6AA 2HM2Q 3QF2A 1Z6TA 3J63A 4M9SA 2OF5H 2DO9A 2YU0A 4P4HA 3MOPG 1FADA 2LWDA 4FH0A 4IZ7B 4M9ZA 4F42A 1C15A 3YGSC 4E9MA 1A1WA 2IB1A 1N3KA 4A2QA 2DBHA 2B1WA 2DBDA 4D8OA 4N1JA 2A9IA 4RHWE 4P4HI 3T6PA 2MS7A 4O9FA 4NQKA 4DWNA 1NGRA 4O7QA 4LWDA 2N7ZA 2A5YB 1PN5A 2YVIA 2KN6A 2NZ7A 2L9MA 4JQWA 2NAQA 3CL3A 2YQFA 1E41A 2KM6A 2BBZA 2LWEA 1E3YA 3EZQB 1D2ZB 2MB9A 2N97A 1CY5A 3LQQA 3MOPK 2OF5A
chains in the Genus database with same CATH superfamily
2N00A 1A1ZA 3MOPA 4O9LA 2MN4A 3YGSP 1UCPA 1YGOA 2N80A 1CWWA 1WH4A 4I16A 4A2WA 4N1LA 4RHWA 4F44A 2O71A 1DDFA 1ICHA 2P1HA 3LQRA 4UZ0A 4ZBWA 2N1FA 4O6XA 4JUPA 4EWIA 2M5VA 2DBGA 2BBRA 4N1KA 3EZQA 1D2ZA 3CRDA 1WXPA 2GF5A 2YGSA 3KATA 2MS8A 4IZAB 2DBFA 2VGQA 2LS7A 2F1SA 2G7RA 2NSNA 2N83A 3J6JA 4M9XA 4QOBA 1WMGA 2MPCA 4IZ5E 2D96A 1DGNA 2L6AA 2HM2Q 3QF2A 1Z6TA 3J63A 4M9SA 2OF5H 2DO9A 2YU0A 4P4HA 3MOPG 1FADA 2LWDA 4FH0A 4IZ7B 4M9ZA 4F42A 1C15A 2MJMA 3YGSC 4E9MA 1A1WA 2IB1A 1N3KA 4A2QA 2DBHA 2B1WA 2XV9A 2DBDA 4D8OA 4N1JA 2A9IA 4RHWE 4P4HI 3T6PA 2MS7A 4O9FA 4NQKA 4DWNA 1NGRA 4O7QA 4LWDA 2N7ZA 2A5YB 1PN5A 2YVIA 2KN6A 2NZ7A 2L9MA 4JQWA 2NAQA 3CL3A 2YQFA 1E41A 2KM6A 2BBZA 2LWEA 1E3YA 3EZQB 1D2ZB 2MB9A 2N97A 1CY5A 3LQQA 3MOPK 2OF5A
chains in the Genus database with same CATH topology
2N00A 1A1ZA 3MOPA 4O9LA 2MN4A 3YGSP 1UCPA 1YGOA 2N80A 1CWWA 1WH4A 4I16A 4A2WA 4N1LA 4RHWA 4F44A 2O71A 1DDFA 1ICHA 2P1HA 3LQRA 4UZ0A 4ZBWA 2N1FA 4O6XA 4JUPA 4EWIA 2M5VA 2DBGA 2BBRA 4N1KA 3EZQA 1D2ZA 3CRDA 1WXPA 2GF5A 2YGSA 3KATA 2MS8A 4IZAB 2DBFA 2VGQA 2LS7A 2F1SA 2G7RA 2NSNA 2N83A 3J6JA 4M9XA 4QOBA 1WMGA 2MPCA 4IZ5E 2D96A 1DGNA 2L6AA 2HM2Q 3QF2A 1Z6TA 3J63A 4M9SA 2OF5H 2DO9A 2YU0A 4P4HA 3MOPG 1FADA 2LWDA 4FH0A 4IZ7B 4M9ZA 4F42A 1C15A 2MJMA 3YGSC 4E9MA 1A1WA 2IB1A 1N3KA 4A2QA 2DBHA 2B1WA 2XV9A 2DBDA 4D8OA 4N1JA 2A9IA 4RHWE 4P4HI 3T6PA 2MS7A 4O9FA 4NQKA 4DWNA 1NGRA 4O7QA 4LWDA 2N7ZA 2A5YB 1PN5A 2YVIA 2KN6A 2NZ7A 2L9MA 4JQWA 2NAQA 3CL3A 2YQFA 1E41A 2KM6A 2BBZA 2LWEA 1E3YA 3EZQB 1D2ZB 2MB9A 2N97A 1CY5A 3LQQA 3MOPK 2OF5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2N00 A;  1A1Z A;  3MOP A;  4O9L A;  2MN4 A;  3YGS P;  1UCP A;  1YGO A;  2N80 A;  1CWW A;  1WH4 A;  4I16 A;  4A2W A;  4N1L A;  4RHW A;  4F44 A;  2O71 A;  1DDF A;  1ICH A;  2P1H A;  3LQR A;  4UZ0 A;  4ZBW A;  2N1F A;  4O6X A;  4JUP A;  4EWI A;  2M5V A;  2DBG A;  2BBR A;  4N1K A;  3EZQ A;  1D2Z A;  3CRD A;  1WXP A;  2GF5 A;  2YGS A;  3KAT A;  2MS8 A;  4IZA B;  2DBF A;  2VGQ A;  2LS7 A;  2F1S A;  2G7R A;  2NSN A;  2N83 A;  3J6J A;  4M9X A;  4QOB A;  1WMG A;  2MPC A;  4IZ5 E;  2D96 A;  1DGN A;  2L6A A;  2HM2 Q;  3QF2 A;  1Z6T A;  3J63 A;  4M9S A;  2OF5 H;  2DO9 A;  2YU0 A;  4P4H A;  3MOP G;  1FAD A;  2LWD A;  4FH0 A;  4IZ7 B;  4M9Z A;  4F42 A;  1C15 A;  3YGS C;  4E9M A;  1A1W A;  2IB1 A;  1N3K A;  4A2Q A;  2DBH A;  2B1W A;  2DBD A;  4D8O A;  4N1J A;  2A9I A;  4RHW E;  4P4H I;  3T6P A;  2MS7 A;  4O9F A;  4NQK A;  4DWN A;  1NGR A;  4O7Q A;  4LWD A;  2N7Z A;  2A5Y B;  1PN5 A;  2YVI A;  2KN6 A;  2NZ7 A;  2L9M A;  4JQW A;  2NAQ A;  3CL3 A;  2YQF A;  1E41 A;  2KM6 A;  2BBZ A;  2LWE A;  1E3Y A;  3EZQ B;  1D2Z B;  2MB9 A;  2N97 A;  1CY5 A;  3LQQ A;  3MOP K;  2OF5 A; 
#chains in the Genus database with same CATH topology
 2N00 A;  1A1Z A;  3MOP A;  4O9L A;  2MN4 A;  3YGS P;  1UCP A;  1YGO A;  2N80 A;  1CWW A;  1WH4 A;  4I16 A;  4A2W A;  4N1L A;  4RHW A;  4F44 A;  2O71 A;  1DDF A;  1ICH A;  2P1H A;  3LQR A;  4UZ0 A;  4ZBW A;  2N1F A;  4O6X A;  4JUP A;  4EWI A;  2M5V A;  2DBG A;  2BBR A;  4N1K A;  3EZQ A;  1D2Z A;  3CRD A;  1WXP A;  2GF5 A;  2YGS A;  3KAT A;  2MS8 A;  4IZA B;  2DBF A;  2VGQ A;  2LS7 A;  2F1S A;  2G7R A;  2NSN A;  2N83 A;  3J6J A;  4M9X A;  4QOB A;  1WMG A;  2MPC A;  4IZ5 E;  2D96 A;  1DGN A;  2L6A A;  2HM2 Q;  3QF2 A;  1Z6T A;  3J63 A;  4M9S A;  2OF5 H;  2DO9 A;  2YU0 A;  4P4H A;  3MOP G;  1FAD A;  2LWD A;  4FH0 A;  4IZ7 B;  4M9Z A;  4F42 A;  1C15 A;  2MJM A;  3YGS C;  4E9M A;  1A1W A;  2IB1 A;  1N3K A;  4A2Q A;  2DBH A;  2B1W A;  2XV9 A;  2DBD A;  4D8O A;  4N1J A;  2A9I A;  4RHW E;  4P4H I;  3T6P A;  2MS7 A;  4O9F A;  4NQK A;  4DWN A;  1NGR A;  4O7Q A;  4LWD A;  2N7Z A;  2A5Y B;  1PN5 A;  2YVI A;  2KN6 A;  2NZ7 A;  2L9M A;  4JQW A;  2NAQ A;  3CL3 A;  2YQF A;  1E41 A;  2KM6 A;  2BBZ A;  2LWE A;  1E3Y A;  3EZQ B;  1D2Z B;  2MB9 A;  2N97 A;  1CY5 A;  3LQQ A;  3MOP K;  2OF5 A; 
#chains in the Genus database with same CATH homology
 2N00 A;  1A1Z A;  3MOP A;  4O9L A;  2MN4 A;  3YGS P;  1UCP A;  1YGO A;  2N80 A;  1CWW A;  1WH4 A;  4I16 A;  4A2W A;  4N1L A;  4RHW A;  4F44 A;  2O71 A;  1DDF A;  1ICH A;  2P1H A;  3LQR A;  4UZ0 A;  4ZBW A;  2N1F A;  4O6X A;  4JUP A;  4EWI A;  2M5V A;  2DBG A;  2BBR A;  4N1K A;  3EZQ A;  1D2Z A;  3CRD A;  1WXP A;  2GF5 A;  2YGS A;  3KAT A;  2MS8 A;  4IZA B;  2DBF A;  2VGQ A;  2LS7 A;  2F1S A;  2G7R A;  2NSN A;  2N83 A;  3J6J A;  4M9X A;  4QOB A;  1WMG A;  2MPC A;  4IZ5 E;  2D96 A;  1DGN A;  2L6A A;  2HM2 Q;  3QF2 A;  1Z6T A;  3J63 A;  4M9S A;  2OF5 H;  2DO9 A;  2YU0 A;  4P4H A;  3MOP G;  1FAD A;  2LWD A;  4FH0 A;  4IZ7 B;  4M9Z A;  4F42 A;  1C15 A;  2MJM A;  3YGS C;  4E9M A;  1A1W A;  2IB1 A;  1N3K A;  4A2Q A;  2DBH A;  2B1W A;  2XV9 A;  2DBD A;  4D8O A;  4N1J A;  2A9I A;  4RHW E;  4P4H I;  3T6P A;  2MS7 A;  4O9F A;  4NQK A;  4DWN A;  1NGR A;  4O7Q A;  4LWD A;  2N7Z A;  2A5Y B;  1PN5 A;  2YVI A;  2KN6 A;  2NZ7 A;  2L9M A;  4JQW A;  2NAQ A;  3CL3 A;  2YQF A;  1E41 A;  2KM6 A;  2BBZ A;  2LWE A;  1E3Y A;  3EZQ B;  1D2Z B;  2MB9 A;  2N97 A;  1CY5 A;  3LQQ A;  3MOP K;  2OF5 A; 
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