4IZAB

Structure of dually phosphorylated erk2 bound to the pea-15 death effector domain
Total Genus 40
1020304050607080900510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
95
structure length
95
Chain Sequence
GMAEYGTLLQDLTNNITLEDLEQLKSACKEDIPSEKSEEITTGSAWFSFLESHNKLDKDNLSYIEHIFEISRRPDLLTMVVDYRTRVLKISEEDE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (1-13)AH3 (42-52)AH2 (17-28)EMPTYTVIII1 (29-32)AH4 (60-70)TI1 (28-31)TIV1 (33-36)TI2 (31-34)TI3 (34-37)TI4 (56-59)AH5 (73-92)Updating...
connected with : NaN
molecule tags Transferase
source organism Homo sapiens
publication title Structure of ERK2 bound to PEA-15 reveals a mechanism for rapid release of activated MAPK.
pubmed doi rcsb
molecule keywords Mitogen-activated protein kinase 1
total genus 40
structure length 95
sequence length 95
ec nomenclature
pdb deposition date 2013-01-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF01335 DED Death effector domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.533.10 Mainly Alpha Orthogonal Bundle Death Domain, Fas Death Domain, Fas 4izaB00
1A1ZA 4NQKA 3LQRA 2DBDA 4JQWA 1FADA 4JUPA 1DDFA 1YGOA 2MPCA 1CY5A 1CWWA 1UCPA 2LWDA 2KN6A 4EWIA 4A2WA 2MN4A 3T6PA 4M9XA 4M9ZA 2DBFA 4IZAB 2B1WA 3CRDA 2IB1A 4IZ5E 4F44A 2DO9A 4N1JA 3CL3A 2A9IA 4UZ0A 2L6AA 2N97A 4DWNA 2HM2Q 1A1WA 4O6XA 4O9LA 4QOBA 2OF5H 1D2ZA 3YGSP 2VGQA 1E3YA 3EZQA 2N7ZA 4RHWA 2N80A 4M9SA 2F1SA 3QF2A 2N00A 2DBGA 3MOPG 3YGSC 2NAQA 4E9MA 4RHWE 2YGSA 3J6JA 2A5YB 3MOPK 1Z6TA 2KM6A 4N1LA 2NSNA 4O9FA 4A2QA 2OF5A 2BBRA 1NGRA 4I16A 2NZ7A 1PN5A 3EZQB 2N1FA 2N83A 4LWDA 3KATA 4O7QA 4D8OA 1C15A 4P4HI 1N3KA 4F42A 2D96A 2L9MA 2LWEA 3J63A 2M5VA 2P1HA 4N1KA 2YQFA 2YVIA 3MOPA 2LS7A 1WH4A 2G7RA 4ZBWA 1DGNA 4FH0A 2YU0A 1D2ZB 4P4HA 2BBZA 1E41A 2DBHA 4IZ7B 2O71A 1WMGA 2MS7A 2GF5A 2MS8A 3LQQA 1WXPA 2MB9A 1ICHA
chains in the Genus database with same CATH superfamily
1A1ZA 4NQKA 3LQRA 2DBDA 4JQWA 1FADA 4JUPA 1DDFA 1YGOA 2MPCA 1CY5A 1CWWA 1UCPA 2LWDA 2KN6A 4EWIA 4A2WA 2MN4A 3T6PA 4M9XA 4M9ZA 2DBFA 4IZAB 2B1WA 3CRDA 2IB1A 4IZ5E 4F44A 2DO9A 4N1JA 3CL3A 2A9IA 4UZ0A 2L6AA 2N97A 4DWNA 2HM2Q 1A1WA 4O6XA 4O9LA 4QOBA 2OF5H 1D2ZA 3YGSP 2VGQA 1E3YA 3EZQA 2N7ZA 4RHWA 2N80A 4M9SA 2F1SA 3QF2A 2N00A 2DBGA 3MOPG 3YGSC 2NAQA 4E9MA 4RHWE 2YGSA 3J6JA 2A5YB 3MOPK 1Z6TA 2KM6A 4N1LA 2NSNA 4O9FA 4A2QA 2OF5A 2BBRA 1NGRA 4I16A 2NZ7A 1PN5A 3EZQB 2N1FA 2N83A 4LWDA 3KATA 4O7QA 4D8OA 1C15A 4P4HI 1N3KA 4F42A 2D96A 2L9MA 2LWEA 3J63A 2M5VA 2P1HA 4N1KA 2YQFA 2YVIA 3MOPA 2LS7A 1WH4A 2G7RA 4ZBWA 1DGNA 4FH0A 2YU0A 1D2ZB 4P4HA 2BBZA 1E41A 2MJMA 2DBHA 4IZ7B 2O71A 1WMGA 2MS7A 2GF5A 2MS8A 3LQQA 1WXPA 2XV9A 2MB9A 1ICHA
chains in the Genus database with same CATH topology
1A1ZA 4NQKA 3LQRA 2DBDA 4JQWA 1FADA 4JUPA 1DDFA 1YGOA 2MPCA 1CY5A 1CWWA 1UCPA 2LWDA 2KN6A 4EWIA 4A2WA 2MN4A 3T6PA 4M9XA 4M9ZA 2DBFA 4IZAB 2B1WA 3CRDA 2IB1A 4IZ5E 4F44A 2DO9A 4N1JA 3CL3A 2A9IA 4UZ0A 2L6AA 2N97A 4DWNA 2HM2Q 1A1WA 4O6XA 4O9LA 4QOBA 2OF5H 1D2ZA 3YGSP 2VGQA 1E3YA 3EZQA 2N7ZA 4RHWA 2N80A 4M9SA 2F1SA 3QF2A 2N00A 2DBGA 3MOPG 3YGSC 2NAQA 4E9MA 4RHWE 2YGSA 3J6JA 2A5YB 3MOPK 1Z6TA 2KM6A 4N1LA 2NSNA 4O9FA 4A2QA 2OF5A 2BBRA 1NGRA 4I16A 2NZ7A 1PN5A 3EZQB 2N1FA 2N83A 4LWDA 3KATA 4O7QA 4D8OA 1C15A 4P4HI 1N3KA 4F42A 2D96A 2L9MA 2LWEA 3J63A 2M5VA 2P1HA 4N1KA 2YQFA 2YVIA 3MOPA 2LS7A 1WH4A 2G7RA 4ZBWA 1DGNA 4FH0A 2YU0A 1D2ZB 4P4HA 2BBZA 1E41A 2MJMA 2DBHA 4IZ7B 2O71A 1WMGA 2MS7A 2GF5A 2MS8A 3LQQA 1WXPA 2XV9A 2MB9A 1ICHA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1A1Z A;  4NQK A;  3LQR A;  2DBD A;  4JQW A;  1FAD A;  4JUP A;  1DDF A;  1YGO A;  2MPC A;  1CY5 A;  1CWW A;  1UCP A;  2LWD A;  2KN6 A;  4EWI A;  4A2W A;  2MN4 A;  3T6P A;  4M9X A;  4M9Z A;  2DBF A;  4IZA B;  2B1W A;  3CRD A;  2IB1 A;  4IZ5 E;  4F44 A;  2DO9 A;  4N1J A;  3CL3 A;  2A9I A;  4UZ0 A;  2L6A A;  2N97 A;  4DWN A;  2HM2 Q;  1A1W A;  4O6X A;  4O9L A;  4QOB A;  2OF5 H;  1D2Z A;  3YGS P;  2VGQ A;  1E3Y A;  3EZQ A;  2N7Z A;  4RHW A;  2N80 A;  4M9S A;  2F1S A;  3QF2 A;  2N00 A;  2DBG A;  3MOP G;  3YGS C;  2NAQ A;  4E9M A;  4RHW E;  2YGS A;  3J6J A;  2A5Y B;  3MOP K;  1Z6T A;  2KM6 A;  4N1L A;  2NSN A;  4O9F A;  4A2Q A;  2OF5 A;  2BBR A;  1NGR A;  4I16 A;  2NZ7 A;  1PN5 A;  3EZQ B;  2N1F A;  2N83 A;  4LWD A;  3KAT A;  4O7Q A;  4D8O A;  1C15 A;  4P4H I;  1N3K A;  4F42 A;  2D96 A;  2L9M A;  2LWE A;  3J63 A;  2M5V A;  2P1H A;  4N1K A;  2YQF A;  2YVI A;  3MOP A;  2LS7 A;  1WH4 A;  2G7R A;  4ZBW A;  1DGN A;  4FH0 A;  2YU0 A;  1D2Z B;  4P4H A;  2BBZ A;  1E41 A;  2DBH A;  4IZ7 B;  2O71 A;  1WMG A;  2MS7 A;  2GF5 A;  2MS8 A;  3LQQ A;  1WXP A;  2MB9 A;  1ICH A; 
#chains in the Genus database with same CATH topology
 1A1Z A;  4NQK A;  3LQR A;  2DBD A;  4JQW A;  1FAD A;  4JUP A;  1DDF A;  1YGO A;  2MPC A;  1CY5 A;  1CWW A;  1UCP A;  2LWD A;  2KN6 A;  4EWI A;  4A2W A;  2MN4 A;  3T6P A;  4M9X A;  4M9Z A;  2DBF A;  4IZA B;  2B1W A;  3CRD A;  2IB1 A;  4IZ5 E;  4F44 A;  2DO9 A;  4N1J A;  3CL3 A;  2A9I A;  4UZ0 A;  2L6A A;  2N97 A;  4DWN A;  2HM2 Q;  1A1W A;  4O6X A;  4O9L A;  4QOB A;  2OF5 H;  1D2Z A;  3YGS P;  2VGQ A;  1E3Y A;  3EZQ A;  2N7Z A;  4RHW A;  2N80 A;  4M9S A;  2F1S A;  3QF2 A;  2N00 A;  2DBG A;  3MOP G;  3YGS C;  2NAQ A;  4E9M A;  4RHW E;  2YGS A;  3J6J A;  2A5Y B;  3MOP K;  1Z6T A;  2KM6 A;  4N1L A;  2NSN A;  4O9F A;  4A2Q A;  2OF5 A;  2BBR A;  1NGR A;  4I16 A;  2NZ7 A;  1PN5 A;  3EZQ B;  2N1F A;  2N83 A;  4LWD A;  3KAT A;  4O7Q A;  4D8O A;  1C15 A;  4P4H I;  1N3K A;  4F42 A;  2D96 A;  2L9M A;  2LWE A;  3J63 A;  2M5V A;  2P1H A;  4N1K A;  2YQF A;  2YVI A;  3MOP A;  2LS7 A;  1WH4 A;  2G7R A;  4ZBW A;  1DGN A;  4FH0 A;  2YU0 A;  1D2Z B;  4P4H A;  2BBZ A;  1E41 A;  2MJM A;  2DBH A;  4IZ7 B;  2O71 A;  1WMG A;  2MS7 A;  2GF5 A;  2MS8 A;  3LQQ A;  1WXP A;  2XV9 A;  2MB9 A;  1ICH A; 
#chains in the Genus database with same CATH homology
 1A1Z A;  4NQK A;  3LQR A;  2DBD A;  4JQW A;  1FAD A;  4JUP A;  1DDF A;  1YGO A;  2MPC A;  1CY5 A;  1CWW A;  1UCP A;  2LWD A;  2KN6 A;  4EWI A;  4A2W A;  2MN4 A;  3T6P A;  4M9X A;  4M9Z A;  2DBF A;  4IZA B;  2B1W A;  3CRD A;  2IB1 A;  4IZ5 E;  4F44 A;  2DO9 A;  4N1J A;  3CL3 A;  2A9I A;  4UZ0 A;  2L6A A;  2N97 A;  4DWN A;  2HM2 Q;  1A1W A;  4O6X A;  4O9L A;  4QOB A;  2OF5 H;  1D2Z A;  3YGS P;  2VGQ A;  1E3Y A;  3EZQ A;  2N7Z A;  4RHW A;  2N80 A;  4M9S A;  2F1S A;  3QF2 A;  2N00 A;  2DBG A;  3MOP G;  3YGS C;  2NAQ A;  4E9M A;  4RHW E;  2YGS A;  3J6J A;  2A5Y B;  3MOP K;  1Z6T A;  2KM6 A;  4N1L A;  2NSN A;  4O9F A;  4A2Q A;  2OF5 A;  2BBR A;  1NGR A;  4I16 A;  2NZ7 A;  1PN5 A;  3EZQ B;  2N1F A;  2N83 A;  4LWD A;  3KAT A;  4O7Q A;  4D8O A;  1C15 A;  4P4H I;  1N3K A;  4F42 A;  2D96 A;  2L9M A;  2LWE A;  3J63 A;  2M5V A;  2P1H A;  4N1K A;  2YQF A;  2YVI A;  3MOP A;  2LS7 A;  1WH4 A;  2G7R A;  4ZBW A;  1DGN A;  4FH0 A;  2YU0 A;  1D2Z B;  4P4H A;  2BBZ A;  1E41 A;  2MJM A;  2DBH A;  4IZ7 B;  2O71 A;  1WMG A;  2MS7 A;  2GF5 A;  2MS8 A;  3LQQ A;  1WXP A;  2XV9 A;  2MB9 A;  1ICH A; 
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