1ED7A

Solution structure of the chitin-binding domain of bacillus circulans wl-12 chitinase a1
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
45
structure length
45
Chain Sequence
AWQVNTAYTAGQLVTYNGKTYKCLQPHTSLAGWEPSNVPALWQLQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Solution structure of the chitin-binding domain of Bacillus circulans WL-12 chitinase A1.
pubmed doi rcsb
molecule tags Hydrolase
source organism Bacillus circulans
molecule keywords CHITINASE A1
total genus 4
structure length 45
sequence length 45
ec nomenclature ec 3.2.1.14: Chitinase.
pdb deposition date 2000-01-27
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.10.20 Mainly Beta Ribbon Seminal Fluid Protein PDC-109 (Domain B) Carbohydrate-binding module superfamily 5/12 1ed7A00
1E6PA 1O6IA 1GOIA 1UR9A 1W1YA 1H0GA 1E15A 4HMEA 4Z2JA 4Z2HA 4MB5A 3WD3A 1W1PA 1ED7A 1W1VA 1OGGA 4MB3A 1GPFA 4HMCA 1E6NA 4Z2LA 4Z2GA 3WD4A 1E6RA 3WD2A 1W1TA 2RTSA 4MB4A 1UR8A 1AIWA 4Z2IA 3WD1A 4TX8A 1OGBA 1H0IA 4Z2KA 4HMDA 3WD0A 1E6ZA 2D49A
chains in the Genus database with same CATH superfamily
1UR9A 4IJFA 4NYUA 2Y2NA 3L25A 4IBBA 2FN2A 4IBEA 4IBJA 2Y2PA 3WD3A 4OUIA 3FKEA 1E8BA 1OGGA 1GPFA 4IBCA 4Z2LA 4Z2GA 1GXDA 3L2AA 2Y2MA 1EAKA 4TX8A 1OGBA 4IBIA 4NZ4A 2BG1A 2D49A 2JCHA 3L28A 3KS8A 2Y2IA 1H8PA 4OJPA 1E15A 4HMEA 4Z2JA 3WX7A 4MB5A 3L27A 4IBGA 1W1PA 4OJ5A 4NZ1A 1QO6A 4GHLA 2JE5A 4HMCA 4NYYA 2Y2OA 2Y2GA 3WD4A 1E6RA 2V5OA 4NZ3A 2Y2KA 4Z2IA 4IBDA 4Z2KA 3HONA 4GH9A 1YUEA 4LG2A 1GOIA 1W1YA 4IBFA 1H0GA 1YU1A 1E88A 4Z2HA 2UWXA 2Y2HA 4QNLA 1CXWA 4MB3A 1YU3A 4OJOA 3M7PA 1PDCA 2FFFB 2XD5A 2RTSA 3KS4A 4MB4A 1UR8A 1YU4A 3MQLA 1CK7A 2Y2JA 3WD0A 1YU2A 4IJEA 1E6ZA 1E6PA 1O6IA 5BPVA 3L29A 4NZ5A 3N3FA 1ED7A 2Y2LA 1W1VA 4OJ6A 1E6NA 4GHAA 2XD1A 3L26A 3HSHA 1KS0A 3WD2A 4IBKA 1W1TA 1L6JA 1AIWA 4OJLA 3WD1A 2IOUA 1YU0A 1H0IA 4HMDA 1J7MA 2Y2QA 4NY2A
chains in the Genus database with same CATH topology
1E6PA 1O6IA 1GOIA 1UR9A 1W1YA 1H0GA 1E15A 4HMEA 4Z2JA 4Z2HA 4MB5A 3WD3A 1W1PA 1ED7A 1W1VA 1OGGA 4MB3A 1GPFA 4HMCA 1E6NA 4Z2LA 4Z2GA 3WD4A 1E6RA 3WD2A 1W1TA 2RTSA 4MB4A 1UR8A 1AIWA 4Z2IA 3WD1A 4TX8A 1OGBA 1H0IA 4Z2KA 4HMDA 3WD0A 1E6ZA 2D49A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E6P A;  1O6I A;  1GOI A;  1UR9 A;  1W1Y A;  1H0G A;  1E15 A;  4HME A;  4Z2J A;  4Z2H A;  4MB5 A;  3WD3 A;  1W1P A;  1ED7 A;  1W1V A;  1OGG A;  4MB3 A;  1GPF A;  4HMC A;  1E6N A;  4Z2L A;  4Z2G A;  3WD4 A;  1E6R A;  3WD2 A;  1W1T A;  2RTS A;  4MB4 A;  1UR8 A;  1AIW A;  4Z2I A;  3WD1 A;  4TX8 A;  1OGB A;  1H0I A;  4Z2K A;  4HMD A;  3WD0 A;  1E6Z A;  2D49 A; 
#chains in the Genus database with same CATH topology
 1UR9 A;  4IJF A;  4NYU A;  2Y2N A;  3L25 A;  4IBB A;  2FN2 A;  4IBE A;  4IBJ A;  2Y2P A;  3WD3 A;  4OUI A;  3FKE A;  1E8B A;  1OGG A;  1GPF A;  4IBC A;  4Z2L A;  4Z2G A;  1GXD A;  3L2A A;  2Y2M A;  1EAK A;  4TX8 A;  1OGB A;  4IBI A;  4NZ4 A;  2BG1 A;  2D49 A;  2JCH A;  3L28 A;  3KS8 A;  2Y2I A;  1H8P A;  4OJP A;  1E15 A;  4HME A;  4Z2J A;  3WX7 A;  4MB5 A;  3L27 A;  4IBG A;  1W1P A;  4OJ5 A;  4NZ1 A;  1QO6 A;  4GHL A;  2JE5 A;  4HMC A;  4NYY A;  2Y2O A;  2Y2G A;  3WD4 A;  1E6R A;  2V5O A;  4NZ3 A;  2Y2K A;  4Z2I A;  4IBD A;  4Z2K A;  3HON A;  4GH9 A;  1YUE A;  4LG2 A;  1GOI A;  1W1Y A;  4IBF A;  1H0G A;  1YU1 A;  1E88 A;  4Z2H A;  2UWX A;  2Y2H A;  4QNL A;  1CXW A;  4MB3 A;  1YU3 A;  4OJO A;  3M7P A;  1PDC A;  2FFF B;  2XD5 A;  2RTS A;  3KS4 A;  4MB4 A;  1UR8 A;  1YU4 A;  3MQL A;  1CK7 A;  2Y2J A;  3WD0 A;  1YU2 A;  4IJE A;  1E6Z A;  1E6P A;  1O6I A;  5BPV A;  3L29 A;  4NZ5 A;  3N3F A;  1ED7 A;  2Y2L A;  1W1V A;  4OJ6 A;  1E6N A;  4GHA A;  2XD1 A;  3L26 A;  3HSH A;  1KS0 A;  3WD2 A;  4IBK A;  1W1T A;  1L6J A;  1AIW A;  4OJL A;  3WD1 A;  2IOU A;  1YU0 A;  1H0I A;  4HMD A;  1J7M A;  2Y2Q A;  4NY2 A; 
#chains in the Genus database with same CATH homology
 1E6P A;  1O6I A;  1GOI A;  1UR9 A;  1W1Y A;  1H0G A;  1E15 A;  4HME A;  4Z2J A;  4Z2H A;  4MB5 A;  3WD3 A;  1W1P A;  1ED7 A;  1W1V A;  1OGG A;  4MB3 A;  1GPF A;  4HMC A;  1E6N A;  4Z2L A;  4Z2G A;  3WD4 A;  1E6R A;  3WD2 A;  1W1T A;  2RTS A;  4MB4 A;  1UR8 A;  1AIW A;  4Z2I A;  3WD1 A;  4TX8 A;  1OGB A;  1H0I A;  4Z2K A;  4HMD A;  3WD0 A;  1E6Z A;  2D49 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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