3TVIA

Crystal structure of clostridium acetobutylicum aspartate kinase (caak): an important allosteric enzyme for industrial amino acids production
Total Genus 128
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
128
sequence length
435
structure length
429
Chain Sequence
IVVTKFGGSSLADSNQFKKVKGIIDSDANRKYIIPSAPGKRTNKDYKITDLLYLCNAHVKNGIPFDDVFKLISQRYTEIVSELNIDMDIAYYLEKVKKNIENGASSDYAASRGEYLNGVILAKYLNAEFIDAAEVIFFDKCFDEKKSYEKIKEKVLSCNKAVIPGFYGSSFNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYMLHEEAIFPVKDSGIPINIKNTNKPSDPGTLILSDTHKEINLGTITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSGVDSVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEINVIVGVETVDFEKAVKSIYNAFN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of Clostridium acetobutylicum Aspartate kinase (CaAK): An important allosteric enzyme for amino acids production.
pubmed doi rcsb
molecule tags Transferase
source organism Clostridium acetobutylicum
molecule keywords Aspartokinase
total genus 128
structure length 429
sequence length 435
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2011-09-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.2130.10 Alpha Beta 2-Layer Sandwich VC0802-like VC0802-like 3tviA02
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3tviA01
3QUOA 2BTYA 4NDPA 3AAWA 4F6TA 2AKOA 2J5TA 3S6GA 3S6KA 2BUFA 2J5VA 2BNEA 2WXBA 4F6TB 2HMFA 2J0WA 2JJXA 1B7BA 1OHAA 3B8GA 2X2WA 4NDQA 3AB2A 2BMUA 3ZZIA 2JI5A 1YBDA 3QUNA 2J0XA 3EK6A 2J4LA 4NDQB 3ZZGA 3D2MA 2IJ9A 2J4JA 2W21A 2AP9A 1ZVPA 1GS5A 4JZ7A 2WE4A 3LL5A 3LKKA 3D2PA 4JZ8A 3U6UA 3C1MA 2WE5A 3K56A 3KZFA 3C1NA 3AB4A 3TVIA 2V5HA 4NDOA 4JZ9A 4NDRB 3K4OA 4OLCA 3ZZFA 4A7XA 3L76A 3ZZHA 4AXSA 4NDOB 2R8VA 1E19A 1GSJA 3L86A 2OGXA 2JJ4A 1OH9A 3QVHA 4I49A 1Z9DA 2RD5A 3S6HA 2BNDA 4NDRA 4AB7A 3EK5A 2BRIA 3K4YA 2V4YA 2OGXB 2F06A 3WWNA 4KZTA 3QVFA 3K52A 2A1FA 4NDPB 2R98A 3T7BA 1OHBA 3WWMA 2BRXA 2J4KA 3NWYA 4USJA 3QURA 3D40A 3C20A 4Q1TA 3D41A 2BNFA 3LL9A 4A7WA 2VA1A 1ZHVA 2CDQA 2E9YA
chains in the Genus database with same CATH superfamily
3QUOA 2BTYA 4NDPA 3AAWA 4F6TA 2AKOA 2J5TA 3S6GA 3S6KA 2BUFA 2J5VA 2BNEA 2WXBA 4F6TB 2HMFA 2J0WA 2JJXA 1B7BA 1OHAA 3B8GA 2X2WA 4NDQA 3AB2A 2BMUA 3ZZIA 4KR9A 3LDUA 2JI5A 1YBDA 3QUNA 3TM5A 2J0XA 3LDGA 3EK6A 2J4LA 3TM4A 4NDQB 3ZZGA 3D2MA 2IJ9A 2J4JA 2W21A 2AP9A 1ZVPA 1GS5A 4JZ7A 2WE4A 3LL5A 3LKKA 3D2PA 4JZ8A 3U6UA 3C1MA 2WE5A 3K56A 3C1NA 3KZFA 3AB4A 3TVIA 2V5HA 4NDOA 4JZ9A 3V97A 4NDRB 4KR7A 3K4OA 3V8VA 4OLCA 3ZZFA 4A7XA 3L76A 3ZZHA 4AXSA 4NDOB 2R8VA 3TLJA 1E19A 1GSJA 3L86A 2OGXA 2JJ4A 1OH9A 3QVHA 4I49A 1Z9DA 2RD5A 3S6HA 2BNDA 4NDRA 4AB7A 3EK5A 2BRIA 3K0BA 2V4YA 3K4YA 2C5SA 2OGXB 2F06A 3WWNA 4KZTA 3QVFA 3K52A 2A1FA 4NDPB 2R98A 3T7BA 1OHBA 3WWMA 4KR6A 2BRXA 2J4KA 3NWYA 4USJA 3QURA 3D40A 3C20A 4Q1TA 3D41A 2BNFA 3LL9A 4A7WA 3TMAA 2VA1A 1ZHVA 2CDQA 2E9YA
chains in the Genus database with same CATH topology
3QUOA 2BTYA 4NDPA 3AAWA 4F6TA 2AKOA 2J5TA 3S6GA 3S6KA 2BUFA 2J5VA 2BNEA 2WXBA 4F6TB 2HMFA 2J0WA 2JJXA 1B7BA 1OHAA 3B8GA 2X2WA 4NDQA 3AB2A 2BMUA 3ZZIA 4KR9A 3LDUA 2JI5A 1YBDA 3QUNA 3TM5A 2J0XA 3LDGA 3EK6A 2J4LA 3TM4A 4NDQB 3ZZGA 3D2MA 2IJ9A 2J4JA 2W21A 2AP9A 1ZVPA 1GS5A 4JZ7A 2WE4A 3LL5A 3LKKA 3D2PA 4JZ8A 3U6UA 3C1MA 2WE5A 3K56A 3C1NA 3KZFA 3AB4A 3TVIA 2V5HA 4NDOA 4JZ9A 3V97A 4NDRB 4KR7A 3K4OA 3V8VA 4OLCA 3ZZFA 4A7XA 3L76A 3ZZHA 4AXSA 4NDOB 2R8VA 3TLJA 1E19A 1GSJA 3L86A 2OGXA 2JJ4A 1OH9A 3QVHA 4I49A 1Z9DA 2RD5A 3S6HA 2BNDA 4NDRA 4AB7A 3EK5A 2BRIA 3K0BA 2V4YA 3K4YA 2C5SA 2OGXB 2F06A 3WWNA 4KZTA 3QVFA 3K52A 2A1FA 4NDPB 2R98A 3T7BA 1OHBA 3WWMA 4KR6A 2BRXA 2J4KA 3NWYA 4USJA 3QURA 3D40A 3C20A 4Q1TA 3D41A 2BNFA 3LL9A 4A7WA 3TMAA 2VA1A 1ZHVA 2CDQA 2E9YA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3QUO A;  2BTY A;  4NDP A;  3AAW A;  4F6T A;  2AKO A;  2J5T A;  3S6G A;  3S6K A;  2BUF A;  2J5V A;  2BNE A;  2WXB A;  4F6T B;  2HMF A;  2J0W A;  2JJX A;  1B7B A;  1OHA A;  3B8G A;  2X2W A;  4NDQ A;  3AB2 A;  2BMU A;  3ZZI A;  2JI5 A;  1YBD A;  3QUN A;  2J0X A;  3EK6 A;  2J4L A;  4NDQ B;  3ZZG A;  3D2M A;  2IJ9 A;  2J4J A;  2W21 A;  2AP9 A;  1ZVP A;  1GS5 A;  4JZ7 A;  2WE4 A;  3LL5 A;  3LKK A;  3D2P A;  4JZ8 A;  3U6U A;  3C1M A;  2WE5 A;  3K56 A;  3KZF A;  3C1N A;  3AB4 A;  3TVI A;  2V5H A;  4NDO A;  4JZ9 A;  4NDR B;  3K4O A;  4OLC A;  3ZZF A;  4A7X A;  3L76 A;  3ZZH A;  4AXS A;  4NDO B;  2R8V A;  1E19 A;  1GSJ A;  3L86 A;  2OGX A;  2JJ4 A;  1OH9 A;  3QVH A;  4I49 A;  1Z9D A;  2RD5 A;  3S6H A;  2BND A;  4NDR A;  4AB7 A;  3EK5 A;  2BRI A;  3K4Y A;  2V4Y A;  2OGX B;  2F06 A;  3WWN A;  4KZT A;  3QVF A;  3K52 A;  2A1F A;  4NDP B;  2R98 A;  3T7B A;  1OHB A;  3WWM A;  2BRX A;  2J4K A;  3NWY A;  4USJ A;  3QUR A;  3D40 A;  3C20 A;  4Q1T A;  3D41 A;  2BNF A;  3LL9 A;  4A7W A;  2VA1 A;  1ZHV A;  2CDQ A;  2E9Y A; 
#chains in the Genus database with same CATH topology
 3QUO A;  2BTY A;  4NDP A;  3AAW A;  4F6T A;  2AKO A;  2J5T A;  3S6G A;  3S6K A;  2BUF A;  2J5V A;  2BNE A;  2WXB A;  4F6T B;  2HMF A;  2J0W A;  2JJX A;  1B7B A;  1OHA A;  3B8G A;  2X2W A;  4NDQ A;  3AB2 A;  2BMU A;  3ZZI A;  4KR9 A;  3LDU A;  2JI5 A;  1YBD A;  3QUN A;  3TM5 A;  2J0X A;  3LDG A;  3EK6 A;  2J4L A;  3TM4 A;  4NDQ B;  3ZZG A;  3D2M A;  2IJ9 A;  2J4J A;  2W21 A;  2AP9 A;  1ZVP A;  1GS5 A;  4JZ7 A;  2WE4 A;  3LL5 A;  3LKK A;  3D2P A;  4JZ8 A;  3U6U A;  3C1M A;  2WE5 A;  3K56 A;  3C1N A;  3KZF A;  3AB4 A;  3TVI A;  2V5H A;  4NDO A;  4JZ9 A;  3V97 A;  4NDR B;  4KR7 A;  3K4O A;  3V8V A;  4OLC A;  3ZZF A;  4A7X A;  3L76 A;  3ZZH A;  4AXS A;  4NDO B;  2R8V A;  3TLJ A;  1E19 A;  1GSJ A;  3L86 A;  2OGX A;  2JJ4 A;  1OH9 A;  3QVH A;  4I49 A;  1Z9D A;  2RD5 A;  3S6H A;  2BND A;  4NDR A;  4AB7 A;  3EK5 A;  2BRI A;  3K0B A;  2V4Y A;  3K4Y A;  2C5S A;  2OGX B;  2F06 A;  3WWN A;  4KZT A;  3QVF A;  3K52 A;  2A1F A;  4NDP B;  2R98 A;  3T7B A;  1OHB A;  3WWM A;  4KR6 A;  2BRX A;  2J4K A;  3NWY A;  4USJ A;  3QUR A;  3D40 A;  3C20 A;  4Q1T A;  3D41 A;  2BNF A;  3LL9 A;  4A7W A;  3TMA A;  2VA1 A;  1ZHV A;  2CDQ A;  2E9Y A; 
#chains in the Genus database with same CATH homology
 3QUO A;  2BTY A;  4NDP A;  3AAW A;  4F6T A;  2AKO A;  2J5T A;  3S6G A;  3S6K A;  2BUF A;  2J5V A;  2BNE A;  2WXB A;  4F6T B;  2HMF A;  2J0W A;  2JJX A;  1B7B A;  1OHA A;  3B8G A;  2X2W A;  4NDQ A;  3AB2 A;  2BMU A;  3ZZI A;  4KR9 A;  3LDU A;  2JI5 A;  1YBD A;  3QUN A;  3TM5 A;  2J0X A;  3LDG A;  3EK6 A;  2J4L A;  3TM4 A;  4NDQ B;  3ZZG A;  3D2M A;  2IJ9 A;  2J4J A;  2W21 A;  2AP9 A;  1ZVP A;  1GS5 A;  4JZ7 A;  2WE4 A;  3LL5 A;  3LKK A;  3D2P A;  4JZ8 A;  3U6U A;  3C1M A;  2WE5 A;  3K56 A;  3C1N A;  3KZF A;  3AB4 A;  3TVI A;  2V5H A;  4NDO A;  4JZ9 A;  3V97 A;  4NDR B;  4KR7 A;  3K4O A;  3V8V A;  4OLC A;  3ZZF A;  4A7X A;  3L76 A;  3ZZH A;  4AXS A;  4NDO B;  2R8V A;  3TLJ A;  1E19 A;  1GSJ A;  3L86 A;  2OGX A;  2JJ4 A;  1OH9 A;  3QVH A;  4I49 A;  1Z9D A;  2RD5 A;  3S6H A;  2BND A;  4NDR A;  4AB7 A;  3EK5 A;  2BRI A;  3K0B A;  2V4Y A;  3K4Y A;  2C5S A;  2OGX B;  2F06 A;  3WWN A;  4KZT A;  3QVF A;  3K52 A;  2A1F A;  4NDP B;  2R98 A;  3T7B A;  1OHB A;  3WWM A;  4KR6 A;  2BRX A;  2J4K A;  3NWY A;  4USJ A;  3QUR A;  3D40 A;  3C20 A;  4Q1T A;  3D41 A;  2BNF A;  3LL9 A;  4A7W A;  3TMA A;  2VA1 A;  1ZHV A;  2CDQ A;  2E9Y A; 
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