1FLCA

X-ray structure of the haemagglutinin-esterase-fusion glycoprotein of influenza c virus
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
427
structure length
427
Chain Sequence
EKIKICLQKQVNSSFSLHNGFGGNLYATEEKRMFELVKPKAGASVLNQSTWIGFGDSRTDKSNSAFPRSADVSAKTADKFRFLSGGSLMLSMFGPPGKVDYLYQGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLNFQKNIYELASQSHCMSLVNALDKTIPLQVTAGTAGNCNNSFLKNPALYTQEVKPSENKCGKENLAFFTLPTQFGTYECKLHLVASCYFIYDSKEVYNKRGCDNYFQVIYDSFGKVVGGLDNRVSPYTGNSGDTPTMQCDMLQLKPGRYSVRSSPRFLLMPERSYCFDMKEKGPVTAVQSIWGKGRESDYAVDQACLSTPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKFGRCPLAAKEESIPKIPDGLLIPTSGTDTTVT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Influenza c virus (c/johannesburg/1/66)
publication title Structure of the haemagglutinin-esterase-fusion glycoprotein of influenza C virus.
pubmed doi rcsb
molecule keywords HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN
total genus 103
structure length 427
sequence length 427
chains with identical sequence C, E
ec nomenclature ec 3.1.1.53: Sialate O-acetylesterase.
pdb deposition date 1999-02-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 1flcA01
5E5WA 5E65A 1FLCA 5E64A 5E66A 5E62A
chains in the Genus database with same CATH superfamily
2RE3A 4A0TA 2ZR4A 3L4HA 3KADA 1ZCNA 3KAGA 1PINA 4A0UA 3M85A 1I5HW 2Q5AA 3FSBA 2YSHA 5E5WA 2OWOA 2XP9A 2BA1A 1TR8A 2DJYA 2LAJA 2YSGA 4E5RA 2EZ5W 3MQGA 2M8IA 3TDBA 1FLCA 2WADA 2E45A 2ZQVA 3TC5A 3LKXA 3PQHA 5E62A 2ZAJA 2XP6A 5E64A 2YSBA 5E66A 2Y8NB 3LKXB 3FS8A 2DK1A 1O6WA 2ZR5A 1RP5A 1WR7A 5AHTA 1K9RA 4U86A 2F21A 1NMVA 2ZQTA 5CQ2A 5E65A 3FSCA 3M7NA 2DWVA 2JXWA 1EG3A 4U85A 1WMVA 2JX8A 5U47A 2XP3A 2JV4A 1EG4A 3ODKA 2DMVA 3KABA 2XPAA 3OOBA 2ZQSA 1K9QA 3KCEA 2KXQA 3MCBA 2YSFA 3CNGA 2M8JA 1YW5A 3NTPA 2DK7A 3MCBB 4GLXA 3TCZA 2ITKA 3LE4A 4QIBA 2XP4A 2M3OW 3KAIA 2XPBA 2XP7A 2QRVA 1JMQA 2YSIA 3WH0A 3MQHA 2MDIA 2XP5A 3KAFA 2XP8A 2YAJB 2JMFA 3KAHA 2L4JA 4U84A 2ZQUA 2ZR6A 4REXA 1F8AB 1TK7A 2WAEA
chains in the Genus database with same CATH topology
2RE3A 4A0TA 2ZR4A 3L4HA 3KADA 1ZCNA 3KAGA 1PINA 4A0UA 3M85A 1I5HW 2Q5AA 3FSBA 2YSHA 5E5WA 2OWOA 2XP9A 2BA1A 1TR8A 2DJYA 2LAJA 2YSGA 4E5RA 2EZ5W 3MQGA 2M8IA 3TDBA 1FLCA 2WADA 2E45A 2ZQVA 3TC5A 3LKXA 3PQHA 5E62A 2ZAJA 2XP6A 5E64A 2YSBA 5E66A 2Y8NB 3LKXB 3FS8A 2DK1A 1O6WA 2ZR5A 1RP5A 1WR7A 5AHTA 1K9RA 4U86A 2F21A 1NMVA 2ZQTA 5CQ2A 5E65A 3FSCA 3M7NA 2DWVA 2JXWA 1EG3A 4U85A 1WMVA 2JX8A 5U47A 2XP3A 2JV4A 1EG4A 3ODKA 2DMVA 3KABA 2XPAA 3OOBA 2ZQSA 1K9QA 3KCEA 2KXQA 3MCBA 2YSFA 3CNGA 2M8JA 1YW5A 3NTPA 2DK7A 3MCBB 4GLXA 3TCZA 2ITKA 3LE4A 4QIBA 2XP4A 2M3OW 3KAIA 2XPBA 2XP7A 2QRVA 1JMQA 2YSIA 3WH0A 3MQHA 2MDIA 2XP5A 3KAFA 2XP8A 2YAJB 2JMFA 3KAHA 2L4JA 4U84A 2ZQUA 2ZR6A 4REXA 1F8AB 1TK7A 2WAEA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E5W A;  5E65 A;  1FLC A;  5E64 A;  5E66 A;  5E62 A; 
#chains in the Genus database with same CATH topology
 2RE3 A;  4A0T A;  2ZR4 A;  3L4H A;  3KAD A;  1ZCN A;  3KAG A;  1PIN A;  4A0U A;  3M85 A;  1I5H W;  2Q5A A;  3FSB A;  2YSH A;  5E5W A;  2OWO A;  2XP9 A;  2BA1 A;  1TR8 A;  2DJY A;  2LAJ A;  2YSG A;  4E5R A;  2EZ5 W;  3MQG A;  2M8I A;  3TDB A;  1FLC A;  2WAD A;  2E45 A;  2ZQV A;  3TC5 A;  3LKX A;  3PQH A;  5E62 A;  2ZAJ A;  2XP6 A;  5E64 A;  2YSB A;  5E66 A;  2Y8N B;  3LKX B;  3FS8 A;  2DK1 A;  1O6W A;  2ZR5 A;  1RP5 A;  1WR7 A;  5AHT A;  1K9R A;  4U86 A;  2F21 A;  1NMV A;  2ZQT A;  5CQ2 A;  5E65 A;  3FSC A;  3M7N A;  2DWV A;  2JXW A;  1EG3 A;  4U85 A;  1WMV A;  2JX8 A;  5U47 A;  2XP3 A;  2JV4 A;  1EG4 A;  3ODK A;  2DMV A;  3KAB A;  2XPA A;  3OOB A;  2ZQS A;  1K9Q A;  3KCE A;  2KXQ A;  3MCB A;  2YSF A;  3CNG A;  2M8J A;  1YW5 A;  3NTP A;  2DK7 A;  3MCB B;  4GLX A;  3TCZ A;  2ITK A;  3LE4 A;  4QIB A;  2XP4 A;  2M3O W;  3KAI A;  2XPB A;  2XP7 A;  2QRV A;  1JMQ A;  2YSI A;  3WH0 A;  3MQH A;  2MDI A;  2XP5 A;  3KAF A;  2XP8 A;  2YAJ B;  2JMF A;  3KAH A;  2L4J A;  4U84 A;  2ZQU A;  2ZR6 A;  4REX A;  1F8A B;  1TK7 A;  2WAE A; 
#chains in the Genus database with same CATH homology
 2RE3 A;  4A0T A;  2ZR4 A;  3L4H A;  3KAD A;  1ZCN A;  3KAG A;  1PIN A;  4A0U A;  3M85 A;  1I5H W;  2Q5A A;  3FSB A;  2YSH A;  5E5W A;  2OWO A;  2XP9 A;  2BA1 A;  1TR8 A;  2DJY A;  2LAJ A;  2YSG A;  4E5R A;  2EZ5 W;  3MQG A;  2M8I A;  3TDB A;  1FLC A;  2WAD A;  2E45 A;  2ZQV A;  3TC5 A;  3LKX A;  3PQH A;  5E62 A;  2ZAJ A;  2XP6 A;  5E64 A;  2YSB A;  5E66 A;  2Y8N B;  3LKX B;  3FS8 A;  2DK1 A;  1O6W A;  2ZR5 A;  1RP5 A;  1WR7 A;  5AHT A;  1K9R A;  4U86 A;  2F21 A;  1NMV A;  2ZQT A;  5CQ2 A;  5E65 A;  3FSC A;  3M7N A;  2DWV A;  2JXW A;  1EG3 A;  4U85 A;  1WMV A;  2JX8 A;  5U47 A;  2XP3 A;  2JV4 A;  1EG4 A;  3ODK A;  2DMV A;  3KAB A;  2XPA A;  3OOB A;  2ZQS A;  1K9Q A;  3KCE A;  2KXQ A;  3MCB A;  2YSF A;  3CNG A;  2M8J A;  1YW5 A;  3NTP A;  2DK7 A;  3MCB B;  4GLX A;  3TCZ A;  2ITK A;  3LE4 A;  4QIB A;  2XP4 A;  2M3O W;  3KAI A;  2XPB A;  2XP7 A;  2QRV A;  1JMQ A;  2YSI A;  3WH0 A;  3MQH A;  2MDI A;  2XP5 A;  3KAF A;  2XP8 A;  2YAJ B;  2JMF A;  3KAH A;  2L4J A;  4U84 A;  2ZQU A;  2ZR6 A;  4REX A;  1F8A B;  1TK7 A;  2WAE A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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