5E65A

The complex structure of hemagglutinin-esterase-fusion mutant protein from the influenza d virus with receptor analog 9-o-ac-3'sln (tr322)
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Hemagglutinin-esterase
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
molecule tags Hydrolase
total genus 119
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e65A01
5E5WA 5E66A 5E65A 5E64A 5E62A 1FLCA
chains in the Genus database with same CATH superfamily
4REXA 3MCBB 5U47A 1FLCA 2JV4A 2JMFA 3TCZA 2DJYA 1WMVA 2QRVA 2XPAA 3KAIA 3PQHA 2OWOA 3KAGA 2ZR5A 2XPBA 3KAHA 2YSGA 2ZQSA 3MCBA 4QIBA 2ZR6A 2ITKA 4A0UA 3KAFA 2ZR4A 2M8IA 5E64A 2E45A 2XP7A 5E62A 2LAJA 3CNGA 3KADA 1I5HW 3WH0A 4U86A 3M7NA 1ZCNA 5E65A 2YAJB 3FS8A 1EG3A 2JX8A 2WAEA 3MQGA 5AHTA 5E5WA 2EZ5W 3KABA 2M8JA 2DMVA 2WADA 3KCEA 3L4HA 3ODKA 1RP5A 2XP5A 2ZQVA 2YSHA 4GLXA 2KXQA 4E5RA 2YSFA 2XP3A 3OOBA 2RE3A 1EG4A 2BA1A 2ZQTA 1PINA 2JXWA 3FSBA 2XP4A 1JMQA 1NMVA 5CQ2A 2DK1A 3LE4A 2YSIA 2Q5AA 1TK7A 2ZQUA 2XP9A 3FSCA 3LKXA 1K9RA 2MDIA 3M85A 3TC5A 1YW5A 1O6WA 2XP8A 1F8AB 3LKXB 3NTPA 2XP6A 4U85A 3MQHA 2DWVA 1TR8A 2ZAJA 2Y8NB 5E66A 2YSBA 1WR7A 1K9QA 3TDBA 4U84A 4A0TA 2L4JA 2F21A 2DK7A 2M3OW
chains in the Genus database with same CATH topology
4REXA 3MCBB 5U47A 1FLCA 2JV4A 2JMFA 3TCZA 2DJYA 1WMVA 2QRVA 2XPAA 3KAIA 3PQHA 2OWOA 3KAGA 2ZR5A 2XPBA 3KAHA 2YSGA 2ZQSA 3MCBA 4QIBA 2ZR6A 2ITKA 4A0UA 3KAFA 2ZR4A 2M8IA 5E64A 2E45A 2XP7A 5E62A 2LAJA 3CNGA 3KADA 1I5HW 3WH0A 4U86A 3M7NA 1ZCNA 5E65A 2YAJB 3FS8A 1EG3A 2JX8A 2WAEA 3MQGA 5AHTA 5E5WA 2EZ5W 3KABA 2M8JA 2DMVA 2WADA 3KCEA 3L4HA 3ODKA 1RP5A 2XP5A 2ZQVA 2YSHA 4GLXA 2KXQA 4E5RA 2YSFA 2XP3A 3OOBA 2RE3A 1EG4A 2BA1A 2ZQTA 1PINA 2JXWA 3FSBA 2XP4A 1JMQA 1NMVA 5CQ2A 2DK1A 3LE4A 2YSIA 2Q5AA 1TK7A 2ZQUA 2XP9A 3FSCA 3LKXA 1K9RA 2MDIA 3M85A 3TC5A 1YW5A 1O6WA 2XP8A 1F8AB 3LKXB 3NTPA 2XP6A 4U85A 3MQHA 2DWVA 1TR8A 2ZAJA 2Y8NB 5E66A 2YSBA 1WR7A 1K9QA 3TDBA 4U84A 4A0TA 2L4JA 2F21A 2DK7A 2M3OW
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E5W A;  5E66 A;  5E65 A;  5E64 A;  5E62 A;  1FLC A; 
#chains in the Genus database with same CATH topology
 4REX A;  3MCB B;  5U47 A;  1FLC A;  2JV4 A;  2JMF A;  3TCZ A;  2DJY A;  1WMV A;  2QRV A;  2XPA A;  3KAI A;  3PQH A;  2OWO A;  3KAG A;  2ZR5 A;  2XPB A;  3KAH A;  2YSG A;  2ZQS A;  3MCB A;  4QIB A;  2ZR6 A;  2ITK A;  4A0U A;  3KAF A;  2ZR4 A;  2M8I A;  5E64 A;  2E45 A;  2XP7 A;  5E62 A;  2LAJ A;  3CNG A;  3KAD A;  1I5H W;  3WH0 A;  4U86 A;  3M7N A;  1ZCN A;  5E65 A;  2YAJ B;  3FS8 A;  1EG3 A;  2JX8 A;  2WAE A;  3MQG A;  5AHT A;  5E5W A;  2EZ5 W;  3KAB A;  2M8J A;  2DMV A;  2WAD A;  3KCE A;  3L4H A;  3ODK A;  1RP5 A;  2XP5 A;  2ZQV A;  2YSH A;  4GLX A;  2KXQ A;  4E5R A;  2YSF A;  2XP3 A;  3OOB A;  2RE3 A;  1EG4 A;  2BA1 A;  2ZQT A;  1PIN A;  2JXW A;  3FSB A;  2XP4 A;  1JMQ A;  1NMV A;  5CQ2 A;  2DK1 A;  3LE4 A;  2YSI A;  2Q5A A;  1TK7 A;  2ZQU A;  2XP9 A;  3FSC A;  3LKX A;  1K9R A;  2MDI A;  3M85 A;  3TC5 A;  1YW5 A;  1O6W A;  2XP8 A;  1F8A B;  3LKX B;  3NTP A;  2XP6 A;  4U85 A;  3MQH A;  2DWV A;  1TR8 A;  2ZAJ A;  2Y8N B;  5E66 A;  2YSB A;  1WR7 A;  1K9Q A;  3TDB A;  4U84 A;  4A0T A;  2L4J A;  2F21 A;  2DK7 A;  2M3O W; 
#chains in the Genus database with same CATH homology
 4REX A;  3MCB B;  5U47 A;  1FLC A;  2JV4 A;  2JMF A;  3TCZ A;  2DJY A;  1WMV A;  2QRV A;  2XPA A;  3KAI A;  3PQH A;  2OWO A;  3KAG A;  2ZR5 A;  2XPB A;  3KAH A;  2YSG A;  2ZQS A;  3MCB A;  4QIB A;  2ZR6 A;  2ITK A;  4A0U A;  3KAF A;  2ZR4 A;  2M8I A;  5E64 A;  2E45 A;  2XP7 A;  5E62 A;  2LAJ A;  3CNG A;  3KAD A;  1I5H W;  3WH0 A;  4U86 A;  3M7N A;  1ZCN A;  5E65 A;  2YAJ B;  3FS8 A;  1EG3 A;  2JX8 A;  2WAE A;  3MQG A;  5AHT A;  5E5W A;  2EZ5 W;  3KAB A;  2M8J A;  2DMV A;  2WAD A;  3KCE A;  3L4H A;  3ODK A;  1RP5 A;  2XP5 A;  2ZQV A;  2YSH A;  4GLX A;  2KXQ A;  4E5R A;  2YSF A;  2XP3 A;  3OOB A;  2RE3 A;  1EG4 A;  2BA1 A;  2ZQT A;  1PIN A;  2JXW A;  3FSB A;  2XP4 A;  1JMQ A;  1NMV A;  5CQ2 A;  2DK1 A;  3LE4 A;  2YSI A;  2Q5A A;  1TK7 A;  2ZQU A;  2XP9 A;  3FSC A;  3LKX A;  1K9R A;  2MDI A;  3M85 A;  3TC5 A;  1YW5 A;  1O6W A;  2XP8 A;  1F8A B;  3LKX B;  3NTP A;  2XP6 A;  4U85 A;  3MQH A;  2DWV A;  1TR8 A;  2ZAJ A;  2Y8N B;  5E66 A;  2YSB A;  1WR7 A;  1K9Q A;  3TDB A;  4U84 A;  4A0T A;  2L4J A;  2F21 A;  2DK7 A;  2M3O W; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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