5E65A

The complex structure of hemagglutinin-esterase-fusion mutant protein from the influenza d virus with receptor analog 9-o-ac-3'sln (tr322)
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
427
structure length
424
Chain Sequence
b'ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Hemagglutinin-esterase
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
molecule tags Hydrolase
total genus 119
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e65A01
5E66A 5E64A 1FLCA 5E65A 5E62A 5E5WA
chains in the Genus database with same CATH superfamily
2KXQA 2OWOA 5E65A 3FS8A 3FSCA 1RP5A 2M8IA 2E45A 2YSBA 1TK7A 3ODKA 1ZCNA 5E64A 2WAEA 3KABA 3KAGA 1JMQA 2M3OW 1TR8A 2Q5AA 2DMVA 1EG4A 2YAJB 1K9RA 2YSIA 2XP4A 3KAHA 3CNGA 2M8JA 2ZQSA 2JV4A 2ZQTA 1FLCA 4U85A 3MQHA 2DK1A 2YSHA 2XP9A 2XP5A 4U84A 2YSGA 5E5WA 3MCBB 5AHTA 1PINA 3MCBA 4A0UA 1NMVA 3LKXB 4QIBA 3MQGA 2XPBA 2MDIA 1WMVA 5CQ2A 2ZAJA 3NTPA 2XP7A 3FSBA 1I5HW 3OOBA 2YSFA 3KAIA 3KCEA 3TC5A 2Y8NB 3M85A 1YW5A 2DK7A 2ITKA 2LAJA 4GLXA 3PQHA 5U47A 1F8AB 2DJYA 1EG3A 2BA1A 2JX8A 2QRVA 2RE3A 3LKXA 2XP8A 3M7NA 2XPAA 3L4HA 1K9QA 2XP3A 2EZ5W 2WADA 4REXA 2ZQUA 2ZR5A 2ZR4A 2F21A 5E62A 3TCZA 2L4JA 1WR7A 3KAFA 3KADA 4U86A 2JMFA 5E66A 2DWVA 2XP6A 4E5RA 2JXWA 4A0TA 2ZR6A 3LE4A 3WH0A 2ZQVA 1O6WA 3TDBA
chains in the Genus database with same CATH topology
2KXQA 2OWOA 5E65A 3FS8A 3FSCA 1RP5A 2M8IA 2E45A 2YSBA 1TK7A 3ODKA 1ZCNA 5E64A 2WAEA 3KABA 3KAGA 1JMQA 2M3OW 1TR8A 2Q5AA 2DMVA 1EG4A 2YAJB 1K9RA 2YSIA 2XP4A 3KAHA 3CNGA 2M8JA 2ZQSA 2JV4A 2ZQTA 1FLCA 4U85A 3MQHA 2DK1A 2YSHA 2XP9A 2XP5A 4U84A 2YSGA 5E5WA 3MCBB 5AHTA 1PINA 3MCBA 4A0UA 1NMVA 3LKXB 4QIBA 3MQGA 2XPBA 2MDIA 1WMVA 5CQ2A 2ZAJA 3NTPA 2XP7A 3FSBA 1I5HW 3OOBA 2YSFA 3KAIA 3KCEA 3TC5A 2Y8NB 3M85A 1YW5A 2DK7A 2ITKA 2LAJA 4GLXA 3PQHA 5U47A 1F8AB 2DJYA 1EG3A 2BA1A 2JX8A 2QRVA 2RE3A 3LKXA 2XP8A 3M7NA 2XPAA 3L4HA 1K9QA 2XP3A 2EZ5W 2WADA 4REXA 2ZQUA 2ZR5A 2ZR4A 2F21A 5E62A 3TCZA 2L4JA 1WR7A 3KAFA 3KADA 4U86A 2JMFA 5E66A 2DWVA 2XP6A 4E5RA 2JXWA 4A0TA 2ZR6A 3LE4A 3WH0A 2ZQVA 1O6WA 3TDBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E66 A;  5E64 A;  1FLC A;  5E65 A;  5E62 A;  5E5W A; 
#chains in the Genus database with same CATH topology
 2KXQ A;  2OWO A;  5E65 A;  3FS8 A;  3FSC A;  1RP5 A;  2M8I A;  2E45 A;  2YSB A;  1TK7 A;  3ODK A;  1ZCN A;  5E64 A;  2WAE A;  3KAB A;  3KAG A;  1JMQ A;  2M3O W;  1TR8 A;  2Q5A A;  2DMV A;  1EG4 A;  2YAJ B;  1K9R A;  2YSI A;  2XP4 A;  3KAH A;  3CNG A;  2M8J A;  2ZQS A;  2JV4 A;  2ZQT A;  1FLC A;  4U85 A;  3MQH A;  2DK1 A;  2YSH A;  2XP9 A;  2XP5 A;  4U84 A;  2YSG A;  5E5W A;  3MCB B;  5AHT A;  1PIN A;  3MCB A;  4A0U A;  1NMV A;  3LKX B;  4QIB A;  3MQG A;  2XPB A;  2MDI A;  1WMV A;  5CQ2 A;  2ZAJ A;  3NTP A;  2XP7 A;  3FSB A;  1I5H W;  3OOB A;  2YSF A;  3KAI A;  3KCE A;  3TC5 A;  2Y8N B;  3M85 A;  1YW5 A;  2DK7 A;  2ITK A;  2LAJ A;  4GLX A;  3PQH A;  5U47 A;  1F8A B;  2DJY A;  1EG3 A;  2BA1 A;  2JX8 A;  2QRV A;  2RE3 A;  3LKX A;  2XP8 A;  3M7N A;  2XPA A;  3L4H A;  1K9Q A;  2XP3 A;  2EZ5 W;  2WAD A;  4REX A;  2ZQU A;  2ZR5 A;  2ZR4 A;  2F21 A;  5E62 A;  3TCZ A;  2L4J A;  1WR7 A;  3KAF A;  3KAD A;  4U86 A;  2JMF A;  5E66 A;  2DWV A;  2XP6 A;  4E5R A;  2JXW A;  4A0T A;  2ZR6 A;  3LE4 A;  3WH0 A;  2ZQV A;  1O6W A;  3TDB A; 
#chains in the Genus database with same CATH homology
 2KXQ A;  2OWO A;  5E65 A;  3FS8 A;  3FSC A;  1RP5 A;  2M8I A;  2E45 A;  2YSB A;  1TK7 A;  3ODK A;  1ZCN A;  5E64 A;  2WAE A;  3KAB A;  3KAG A;  1JMQ A;  2M3O W;  1TR8 A;  2Q5A A;  2DMV A;  1EG4 A;  2YAJ B;  1K9R A;  2YSI A;  2XP4 A;  3KAH A;  3CNG A;  2M8J A;  2ZQS A;  2JV4 A;  2ZQT A;  1FLC A;  4U85 A;  3MQH A;  2DK1 A;  2YSH A;  2XP9 A;  2XP5 A;  4U84 A;  2YSG A;  5E5W A;  3MCB B;  5AHT A;  1PIN A;  3MCB A;  4A0U A;  1NMV A;  3LKX B;  4QIB A;  3MQG A;  2XPB A;  2MDI A;  1WMV A;  5CQ2 A;  2ZAJ A;  3NTP A;  2XP7 A;  3FSB A;  1I5H W;  3OOB A;  2YSF A;  3KAI A;  3KCE A;  3TC5 A;  2Y8N B;  3M85 A;  1YW5 A;  2DK7 A;  2ITK A;  2LAJ A;  4GLX A;  3PQH A;  5U47 A;  1F8A B;  2DJY A;  1EG3 A;  2BA1 A;  2JX8 A;  2QRV A;  2RE3 A;  3LKX A;  2XP8 A;  3M7N A;  2XPA A;  3L4H A;  1K9Q A;  2XP3 A;  2EZ5 W;  2WAD A;  4REX A;  2ZQU A;  2ZR5 A;  2ZR4 A;  2F21 A;  5E62 A;  3TCZ A;  2L4J A;  1WR7 A;  3KAF A;  3KAD A;  4U86 A;  2JMF A;  5E66 A;  2DWV A;  2XP6 A;  4E5R A;  2JXW A;  4A0T A;  2ZR6 A;  3LE4 A;  3WH0 A;  2ZQV A;  1O6W A;  3TDB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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