5E5WA

Hemagglutinin-esterase-fusion mutant structure of influenza d virus
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Hemagglutinin-esterase
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
total genus 122
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e5wA01
5E66A 5E65A 5E64A 5E62A 1FLCA 5E5WA
chains in the Genus database with same CATH superfamily
3KABA 1RP5A 2M8IA 2DMVA 2F21A 4A0UA 2Q5AA 2YSGA 3LKXA 2E45A 3MQGA 1TK7A 3TC5A 5CQ2A 4REXA 2DK7A 5E66A 2WADA 2XPAA 5E64A 5AHTA 2EZ5W 5U47A 2JMFA 2M8JA 3KADA 1JMQA 2L4JA 1ZCNA 1FLCA 2ZQTA 3KAFA 3TCZA 3KCEA 2KXQA 4GLXA 2JX8A 1TR8A 3TDBA 3CNGA 2JV4A 1EG3A 3PQHA 2WAEA 1F8AB 3M85A 2JXWA 2XP4A 2QRVA 2ZQUA 1YW5A 2DWVA 3FSCA 3MCBA 4E5RA 4U85A 2MDIA 1K9RA 2YSBA 4A0TA 3M7NA 1I5HW 3OOBA 3LE4A 3KAGA 3MQHA 3LKXB 2XP9A 5E62A 1EG4A 1O6WA 3FS8A 2ZQVA 2ZR5A 1WMVA 2Y8NB 4U84A 5E5WA 2ZR6A 2ITKA 2ZQSA 3WH0A 3NTPA 2DJYA 2XP7A 5E65A 1WR7A 3ODKA 2XP8A 1NMVA 2ZR4A 2OWOA 3KAIA 2LAJA 2XPBA 2YAJB 4U86A 3KAHA 2YSHA 1K9QA 3FSBA 2XP3A 2XP6A 2DK1A 2RE3A 4QIBA 3MCBB 1PINA 2YSFA 2BA1A 2ZAJA 2M3OW 2XP5A 3L4HA 2YSIA
chains in the Genus database with same CATH topology
3KABA 1RP5A 2M8IA 2DMVA 2F21A 4A0UA 2Q5AA 2YSGA 3LKXA 2E45A 3MQGA 1TK7A 3TC5A 5CQ2A 4REXA 2DK7A 5E66A 2WADA 2XPAA 5E64A 5AHTA 2EZ5W 5U47A 2JMFA 2M8JA 3KADA 1JMQA 2L4JA 1ZCNA 1FLCA 2ZQTA 3KAFA 3TCZA 3KCEA 2KXQA 4GLXA 2JX8A 1TR8A 3TDBA 3CNGA 2JV4A 1EG3A 3PQHA 2WAEA 1F8AB 3M85A 2JXWA 2XP4A 2QRVA 2ZQUA 1YW5A 2DWVA 3FSCA 3MCBA 4E5RA 4U85A 2MDIA 1K9RA 2YSBA 4A0TA 3M7NA 1I5HW 3OOBA 3LE4A 3KAGA 3MQHA 3LKXB 2XP9A 5E62A 1EG4A 1O6WA 3FS8A 2ZQVA 2ZR5A 1WMVA 2Y8NB 4U84A 5E5WA 2ZR6A 2ITKA 2ZQSA 3WH0A 3NTPA 2DJYA 2XP7A 5E65A 1WR7A 3ODKA 2XP8A 1NMVA 2ZR4A 2OWOA 3KAIA 2LAJA 2XPBA 2YAJB 4U86A 3KAHA 2YSHA 1K9QA 3FSBA 2XP3A 2XP6A 2DK1A 2RE3A 4QIBA 3MCBB 1PINA 2YSFA 2BA1A 2ZAJA 2M3OW 2XP5A 3L4HA 2YSIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E66 A;  5E65 A;  5E64 A;  5E62 A;  1FLC A;  5E5W A; 
#chains in the Genus database with same CATH topology
 3KAB A;  1RP5 A;  2M8I A;  2DMV A;  2F21 A;  4A0U A;  2Q5A A;  2YSG A;  3LKX A;  2E45 A;  3MQG A;  1TK7 A;  3TC5 A;  5CQ2 A;  4REX A;  2DK7 A;  5E66 A;  2WAD A;  2XPA A;  5E64 A;  5AHT A;  2EZ5 W;  5U47 A;  2JMF A;  2M8J A;  3KAD A;  1JMQ A;  2L4J A;  1ZCN A;  1FLC A;  2ZQT A;  3KAF A;  3TCZ A;  3KCE A;  2KXQ A;  4GLX A;  2JX8 A;  1TR8 A;  3TDB A;  3CNG A;  2JV4 A;  1EG3 A;  3PQH A;  2WAE A;  1F8A B;  3M85 A;  2JXW A;  2XP4 A;  2QRV A;  2ZQU A;  1YW5 A;  2DWV A;  3FSC A;  3MCB A;  4E5R A;  4U85 A;  2MDI A;  1K9R A;  2YSB A;  4A0T A;  3M7N A;  1I5H W;  3OOB A;  3LE4 A;  3KAG A;  3MQH A;  3LKX B;  2XP9 A;  5E62 A;  1EG4 A;  1O6W A;  3FS8 A;  2ZQV A;  2ZR5 A;  1WMV A;  2Y8N B;  4U84 A;  5E5W A;  2ZR6 A;  2ITK A;  2ZQS A;  3WH0 A;  3NTP A;  2DJY A;  2XP7 A;  5E65 A;  1WR7 A;  3ODK A;  2XP8 A;  1NMV A;  2ZR4 A;  2OWO A;  3KAI A;  2LAJ A;  2XPB A;  2YAJ B;  4U86 A;  3KAH A;  2YSH A;  1K9Q A;  3FSB A;  2XP3 A;  2XP6 A;  2DK1 A;  2RE3 A;  4QIB A;  3MCB B;  1PIN A;  2YSF A;  2BA1 A;  2ZAJ A;  2M3O W;  2XP5 A;  3L4H A;  2YSI A; 
#chains in the Genus database with same CATH homology
 3KAB A;  1RP5 A;  2M8I A;  2DMV A;  2F21 A;  4A0U A;  2Q5A A;  2YSG A;  3LKX A;  2E45 A;  3MQG A;  1TK7 A;  3TC5 A;  5CQ2 A;  4REX A;  2DK7 A;  5E66 A;  2WAD A;  2XPA A;  5E64 A;  5AHT A;  2EZ5 W;  5U47 A;  2JMF A;  2M8J A;  3KAD A;  1JMQ A;  2L4J A;  1ZCN A;  1FLC A;  2ZQT A;  3KAF A;  3TCZ A;  3KCE A;  2KXQ A;  4GLX A;  2JX8 A;  1TR8 A;  3TDB A;  3CNG A;  2JV4 A;  1EG3 A;  3PQH A;  2WAE A;  1F8A B;  3M85 A;  2JXW A;  2XP4 A;  2QRV A;  2ZQU A;  1YW5 A;  2DWV A;  3FSC A;  3MCB A;  4E5R A;  4U85 A;  2MDI A;  1K9R A;  2YSB A;  4A0T A;  3M7N A;  1I5H W;  3OOB A;  3LE4 A;  3KAG A;  3MQH A;  3LKX B;  2XP9 A;  5E62 A;  1EG4 A;  1O6W A;  3FS8 A;  2ZQV A;  2ZR5 A;  1WMV A;  2Y8N B;  4U84 A;  5E5W A;  2ZR6 A;  2ITK A;  2ZQS A;  3WH0 A;  3NTP A;  2DJY A;  2XP7 A;  5E65 A;  1WR7 A;  3ODK A;  2XP8 A;  1NMV A;  2ZR4 A;  2OWO A;  3KAI A;  2LAJ A;  2XPB A;  2YAJ B;  4U86 A;  3KAH A;  2YSH A;  1K9Q A;  3FSB A;  2XP3 A;  2XP6 A;  2DK1 A;  2RE3 A;  4QIB A;  3MCB B;  1PIN A;  2YSF A;  2BA1 A;  2ZAJ A;  2M3O W;  2XP5 A;  3L4H A;  2YSI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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