5E5WA

Hemagglutinin-esterase-fusion mutant structure of influenza d virus
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Hemagglutinin-esterase
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
molecule tags Hydrolase
total genus 122
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e5wA01
5E64A 5E62A 1FLCA 5E66A 5E65A 5E5WA
chains in the Genus database with same CATH superfamily
1JMQA 3M85A 5U47A 2F21A 2ZR4A 3KAGA 2M8IA 2RE3A 5CQ2A 1NMVA 3ODKA 5E64A 4GLXA 2YSIA 2KXQA 3KADA 2MDIA 4REXA 2DMVA 3LKXB 3NTPA 1I5HW 4U85A 2ZR5A 2EZ5W 2YSGA 2Y8NB 1TK7A 3CNGA 3KAHA 3FS8A 2ZAJA 2XP3A 2XPAA 2WADA 2WAEA 1WMVA 3MQGA 3KAIA 3FSBA 1WR7A 4A0UA 2BA1A 2YSFA 2ZQSA 2YSBA 2OWOA 1YW5A 2DWVA 2DJYA 1EG3A 3MCBB 3TCZA 2M8JA 1RP5A 2Q5AA 5E62A 4U84A 4QIBA 2XP8A 3LKXA 4A0TA 3KCEA 2LAJA 2JX8A 2ZQTA 3FSCA 2DK1A 5E5WA 5AHTA 2ZR6A 2QRVA 1PINA 3PQHA 2ITKA 2XPBA 3M7NA 2YSHA 2DK7A 1FLCA 2JV4A 2L4JA 2XP9A 2XP6A 3WH0A 2XP5A 2ZQVA 2JXWA 5E66A 3TC5A 1K9RA 5E65A 1K9QA 1ZCNA 3KAFA 3TDBA 3MCBA 2E45A 3KABA 4U86A 4E5RA 3L4HA 3LE4A 2YAJB 2XP4A 1EG4A 1O6WA 2JMFA 2M3OW 3MQHA 2XP7A 1TR8A 3OOBA 1F8AB 2ZQUA
chains in the Genus database with same CATH topology
1JMQA 3M85A 5U47A 2F21A 2ZR4A 3KAGA 2M8IA 2RE3A 5CQ2A 1NMVA 3ODKA 5E64A 4GLXA 2YSIA 2KXQA 3KADA 2MDIA 4REXA 2DMVA 3LKXB 3NTPA 1I5HW 4U85A 2ZR5A 2EZ5W 2YSGA 2Y8NB 1TK7A 3CNGA 3KAHA 3FS8A 2ZAJA 2XP3A 2XPAA 2WADA 2WAEA 1WMVA 3MQGA 3KAIA 3FSBA 1WR7A 4A0UA 2BA1A 2YSFA 2ZQSA 2YSBA 2OWOA 1YW5A 2DWVA 2DJYA 1EG3A 3MCBB 3TCZA 2M8JA 1RP5A 2Q5AA 5E62A 4U84A 4QIBA 2XP8A 3LKXA 4A0TA 3KCEA 2LAJA 2JX8A 2ZQTA 3FSCA 2DK1A 5E5WA 5AHTA 2ZR6A 2QRVA 1PINA 3PQHA 2ITKA 2XPBA 3M7NA 2YSHA 2DK7A 1FLCA 2JV4A 2L4JA 2XP9A 2XP6A 3WH0A 2XP5A 2ZQVA 2JXWA 5E66A 3TC5A 1K9RA 5E65A 1K9QA 1ZCNA 3KAFA 3TDBA 3MCBA 2E45A 3KABA 4U86A 4E5RA 3L4HA 3LE4A 2YAJB 2XP4A 1EG4A 1O6WA 2JMFA 2M3OW 3MQHA 2XP7A 1TR8A 3OOBA 1F8AB 2ZQUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E64 A;  5E62 A;  1FLC A;  5E66 A;  5E65 A;  5E5W A; 
#chains in the Genus database with same CATH topology
 1JMQ A;  3M85 A;  5U47 A;  2F21 A;  2ZR4 A;  3KAG A;  2M8I A;  2RE3 A;  5CQ2 A;  1NMV A;  3ODK A;  5E64 A;  4GLX A;  2YSI A;  2KXQ A;  3KAD A;  2MDI A;  4REX A;  2DMV A;  3LKX B;  3NTP A;  1I5H W;  4U85 A;  2ZR5 A;  2EZ5 W;  2YSG A;  2Y8N B;  1TK7 A;  3CNG A;  3KAH A;  3FS8 A;  2ZAJ A;  2XP3 A;  2XPA A;  2WAD A;  2WAE A;  1WMV A;  3MQG A;  3KAI A;  3FSB A;  1WR7 A;  4A0U A;  2BA1 A;  2YSF A;  2ZQS A;  2YSB A;  2OWO A;  1YW5 A;  2DWV A;  2DJY A;  1EG3 A;  3MCB B;  3TCZ A;  2M8J A;  1RP5 A;  2Q5A A;  5E62 A;  4U84 A;  4QIB A;  2XP8 A;  3LKX A;  4A0T A;  3KCE A;  2LAJ A;  2JX8 A;  2ZQT A;  3FSC A;  2DK1 A;  5E5W A;  5AHT A;  2ZR6 A;  2QRV A;  1PIN A;  3PQH A;  2ITK A;  2XPB A;  3M7N A;  2YSH A;  2DK7 A;  1FLC A;  2JV4 A;  2L4J A;  2XP9 A;  2XP6 A;  3WH0 A;  2XP5 A;  2ZQV A;  2JXW A;  5E66 A;  3TC5 A;  1K9R A;  5E65 A;  1K9Q A;  1ZCN A;  3KAF A;  3TDB A;  3MCB A;  2E45 A;  3KAB A;  4U86 A;  4E5R A;  3L4H A;  3LE4 A;  2YAJ B;  2XP4 A;  1EG4 A;  1O6W A;  2JMF A;  2M3O W;  3MQH A;  2XP7 A;  1TR8 A;  3OOB A;  1F8A B;  2ZQU A; 
#chains in the Genus database with same CATH homology
 1JMQ A;  3M85 A;  5U47 A;  2F21 A;  2ZR4 A;  3KAG A;  2M8I A;  2RE3 A;  5CQ2 A;  1NMV A;  3ODK A;  5E64 A;  4GLX A;  2YSI A;  2KXQ A;  3KAD A;  2MDI A;  4REX A;  2DMV A;  3LKX B;  3NTP A;  1I5H W;  4U85 A;  2ZR5 A;  2EZ5 W;  2YSG A;  2Y8N B;  1TK7 A;  3CNG A;  3KAH A;  3FS8 A;  2ZAJ A;  2XP3 A;  2XPA A;  2WAD A;  2WAE A;  1WMV A;  3MQG A;  3KAI A;  3FSB A;  1WR7 A;  4A0U A;  2BA1 A;  2YSF A;  2ZQS A;  2YSB A;  2OWO A;  1YW5 A;  2DWV A;  2DJY A;  1EG3 A;  3MCB B;  3TCZ A;  2M8J A;  1RP5 A;  2Q5A A;  5E62 A;  4U84 A;  4QIB A;  2XP8 A;  3LKX A;  4A0T A;  3KCE A;  2LAJ A;  2JX8 A;  2ZQT A;  3FSC A;  2DK1 A;  5E5W A;  5AHT A;  2ZR6 A;  2QRV A;  1PIN A;  3PQH A;  2ITK A;  2XPB A;  3M7N A;  2YSH A;  2DK7 A;  1FLC A;  2JV4 A;  2L4J A;  2XP9 A;  2XP6 A;  3WH0 A;  2XP5 A;  2ZQV A;  2JXW A;  5E66 A;  3TC5 A;  1K9R A;  5E65 A;  1K9Q A;  1ZCN A;  3KAF A;  3TDB A;  3MCB A;  2E45 A;  3KAB A;  4U86 A;  4E5R A;  3L4H A;  3LE4 A;  2YAJ B;  2XP4 A;  1EG4 A;  1O6W A;  2JMF A;  2M3O W;  3MQH A;  2XP7 A;  1TR8 A;  3OOB A;  1F8A B;  2ZQU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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