5E5WA

Hemagglutinin-esterase-fusion mutant structure of influenza d virus
Total Genus 122
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
122
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Hemagglutinin-esterase
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
molecule tags Hydrolase
total genus 122
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e5wA01
5E66A 5E65A 5E62A 1FLCA 5E5WA 5E64A
chains in the Genus database with same CATH superfamily
3WH0A 2WAEA 2JXWA 2KXQA 2YAJB 2JV4A 2XPAA 2ZQVA 3FSCA 4GLXA 3FS8A 3MQGA 1O6WA 3KCEA 2DJYA 2XPBA 3LE4A 1JMQA 1K9QA 5U47A 3MCBB 2ZR5A 2XP9A 2XP4A 2DMVA 2DK7A 2L4JA 4REXA 2XP7A 2BA1A 2RE3A 4A0UA 3KAGA 1WR7A 2YSGA 2DK1A 2ZQTA 2JMFA 1F8AB 2JX8A 2F21A 2ZR4A 2ZQSA 2M8IA 1PINA 3TC5A 2YSHA 3ODKA 3KABA 4U85A 3MCBA 3KAHA 4U84A 2YSBA 2MDIA 4A0TA 2M8JA 4QIBA 2ITKA 2M3OW 1TR8A 1WMVA 3NTPA 5AHTA 1K9RA 3LKXB 2XP5A 1ZCNA 2XP8A 1FLCA 2Q5AA 2OWOA 3KAIA 2XP3A 2ZQUA 1EG4A 3M85A 3TCZA 3CNGA 1YW5A 2YSIA 2EZ5W 5E66A 2QRVA 1NMVA 2Y8NB 2E45A 1EG3A 3KADA 3LKXA 3PQHA 3OOBA 3M7NA 5CQ2A 3MQHA 3TDBA 2DWVA 1I5HW 2LAJA 5E62A 3L4HA 4U86A 1RP5A 5E64A 5E65A 3KAFA 1TK7A 2XP6A 2YSFA 2ZAJA 4E5RA 5E5WA 3FSBA 2WADA 2ZR6A
chains in the Genus database with same CATH topology
3WH0A 2WAEA 2JXWA 2KXQA 2YAJB 2JV4A 2XPAA 2ZQVA 3FSCA 4GLXA 3FS8A 3MQGA 1O6WA 3KCEA 2DJYA 2XPBA 3LE4A 1JMQA 1K9QA 5U47A 3MCBB 2ZR5A 2XP9A 2XP4A 2DMVA 2DK7A 2L4JA 4REXA 2XP7A 2BA1A 2RE3A 4A0UA 3KAGA 1WR7A 2YSGA 2DK1A 2ZQTA 2JMFA 1F8AB 2JX8A 2F21A 2ZR4A 2ZQSA 2M8IA 1PINA 3TC5A 2YSHA 3ODKA 3KABA 4U85A 3MCBA 3KAHA 4U84A 2YSBA 2MDIA 4A0TA 2M8JA 4QIBA 2ITKA 2M3OW 1TR8A 1WMVA 3NTPA 5AHTA 1K9RA 3LKXB 2XP5A 1ZCNA 2XP8A 1FLCA 2Q5AA 2OWOA 3KAIA 2XP3A 2ZQUA 1EG4A 3M85A 3TCZA 3CNGA 1YW5A 2YSIA 2EZ5W 5E66A 2QRVA 1NMVA 2Y8NB 2E45A 1EG3A 3KADA 3LKXA 3PQHA 3OOBA 3M7NA 5CQ2A 3MQHA 3TDBA 2DWVA 1I5HW 2LAJA 5E62A 3L4HA 4U86A 1RP5A 5E64A 5E65A 3KAFA 1TK7A 2XP6A 2YSFA 2ZAJA 4E5RA 5E5WA 3FSBA 2WADA 2ZR6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E66 A;  5E65 A;  5E62 A;  1FLC A;  5E5W A;  5E64 A; 
#chains in the Genus database with same CATH topology
 3WH0 A;  2WAE A;  2JXW A;  2KXQ A;  2YAJ B;  2JV4 A;  2XPA A;  2ZQV A;  3FSC A;  4GLX A;  3FS8 A;  3MQG A;  1O6W A;  3KCE A;  2DJY A;  2XPB A;  3LE4 A;  1JMQ A;  1K9Q A;  5U47 A;  3MCB B;  2ZR5 A;  2XP9 A;  2XP4 A;  2DMV A;  2DK7 A;  2L4J A;  4REX A;  2XP7 A;  2BA1 A;  2RE3 A;  4A0U A;  3KAG A;  1WR7 A;  2YSG A;  2DK1 A;  2ZQT A;  2JMF A;  1F8A B;  2JX8 A;  2F21 A;  2ZR4 A;  2ZQS A;  2M8I A;  1PIN A;  3TC5 A;  2YSH A;  3ODK A;  3KAB A;  4U85 A;  3MCB A;  3KAH A;  4U84 A;  2YSB A;  2MDI A;  4A0T A;  2M8J A;  4QIB A;  2ITK A;  2M3O W;  1TR8 A;  1WMV A;  3NTP A;  5AHT A;  1K9R A;  3LKX B;  2XP5 A;  1ZCN A;  2XP8 A;  1FLC A;  2Q5A A;  2OWO A;  3KAI A;  2XP3 A;  2ZQU A;  1EG4 A;  3M85 A;  3TCZ A;  3CNG A;  1YW5 A;  2YSI A;  2EZ5 W;  5E66 A;  2QRV A;  1NMV A;  2Y8N B;  2E45 A;  1EG3 A;  3KAD A;  3LKX A;  3PQH A;  3OOB A;  3M7N A;  5CQ2 A;  3MQH A;  3TDB A;  2DWV A;  1I5H W;  2LAJ A;  5E62 A;  3L4H A;  4U86 A;  1RP5 A;  5E64 A;  5E65 A;  3KAF A;  1TK7 A;  2XP6 A;  2YSF A;  2ZAJ A;  4E5R A;  5E5W A;  3FSB A;  2WAD A;  2ZR6 A; 
#chains in the Genus database with same CATH homology
 3WH0 A;  2WAE A;  2JXW A;  2KXQ A;  2YAJ B;  2JV4 A;  2XPA A;  2ZQV A;  3FSC A;  4GLX A;  3FS8 A;  3MQG A;  1O6W A;  3KCE A;  2DJY A;  2XPB A;  3LE4 A;  1JMQ A;  1K9Q A;  5U47 A;  3MCB B;  2ZR5 A;  2XP9 A;  2XP4 A;  2DMV A;  2DK7 A;  2L4J A;  4REX A;  2XP7 A;  2BA1 A;  2RE3 A;  4A0U A;  3KAG A;  1WR7 A;  2YSG A;  2DK1 A;  2ZQT A;  2JMF A;  1F8A B;  2JX8 A;  2F21 A;  2ZR4 A;  2ZQS A;  2M8I A;  1PIN A;  3TC5 A;  2YSH A;  3ODK A;  3KAB A;  4U85 A;  3MCB A;  3KAH A;  4U84 A;  2YSB A;  2MDI A;  4A0T A;  2M8J A;  4QIB A;  2ITK A;  2M3O W;  1TR8 A;  1WMV A;  3NTP A;  5AHT A;  1K9R A;  3LKX B;  2XP5 A;  1ZCN A;  2XP8 A;  1FLC A;  2Q5A A;  2OWO A;  3KAI A;  2XP3 A;  2ZQU A;  1EG4 A;  3M85 A;  3TCZ A;  3CNG A;  1YW5 A;  2YSI A;  2EZ5 W;  5E66 A;  2QRV A;  1NMV A;  2Y8N B;  2E45 A;  1EG3 A;  3KAD A;  3LKX A;  3PQH A;  3OOB A;  3M7N A;  5CQ2 A;  3MQH A;  3TDB A;  2DWV A;  1I5H W;  2LAJ A;  5E62 A;  3L4H A;  4U86 A;  1RP5 A;  5E64 A;  5E65 A;  3KAF A;  1TK7 A;  2XP6 A;  2YSF A;  2ZAJ A;  4E5R A;  5E5W A;  3FSB A;  2WAD A;  2ZR6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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