3L4HA

Helical box domain and second ww domain of the human e3 ubiquitin-protein ligase hecw1
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
109
structure length
109
Chain Sequence
LLLQSPAVKFITNPEFFTVLHANYSAYRVFTSSTCLKHMILKVRRDARNFERYQHNRDLVNFINMFADTRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPLQNG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Protein binding
molecule keywords E3 ubiquitin-protein ligase HECW1
publication title The tandem helical box and second WW domains of human HECW1
rcsb
source organism Homo sapiens
total genus 27
structure length 109
sequence length 109
ec nomenclature ec 2.3.2.26: HECT-type E3 ubiquitin transferase.
pdb deposition date 2009-12-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF18436 HECW1_helix Helical box domain of E3 ubiquitin-protein ligase HECW1
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.10 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 3l4hA01
2ZQTA 2BA1A 1K9QA 1F8AB 1YW5A 2XP9A 3TCZA 2LAJA 3WH0A 2YSIA 2XP6A 1K9RA 2DMVA 1I5HW 2XPBA 2F21A 2E45A 3KAIA 2JV4A 2XP5A 1NMVA 2L4JA 2YSFA 4U86A 2JX8A 2ZQVA 2YSBA 1O6WA 3TDBA 2ZQUA 3LE4A 3NTPA 3CNGA 1TK7A 3ODKA 2DK1A 2MDIA 2JMFA 2EZ5W 4QIBA 5AHTA 2ZR6A 1WR7A 1EG4A 3TC5A 1WMVA 3L4HA 2YSHA 2KXQA 2RE3A 1EG3A 2XP4A 2ITKA 3M85A 2JXWA 1ZCNA 2DK7A 3KADA 4E5RA 2M8JA 2ZR5A 4U85A 3OOBA 2XP8A 3KAHA 3KCEA 3KAFA 5CQ2A 2XP7A 2YSGA 3M7NA 2Q5AA 2DWVA 2DJYA 4U84A 3KABA 2XP3A 2M8IA 1PINA 2ZR4A 4REXA 2XPAA 3KAGA 2M3OW 2ZQSA 2ZAJA 1JMQA
chains in the Genus database with same CATH superfamily
2ZQTA 2BA1A 1K9QA 1F8AB 5E5WA 1YW5A 2XP9A 3TCZA 2LAJA 2YAJB 2WADA 3WH0A 2YSIA 2XP6A 1K9RA 2DMVA 5E65A 1I5HW 2XPBA 2F21A 2E45A 3KAIA 3FSCA 4A0TA 2JV4A 2XP5A 2Y8NB 1NMVA 2L4JA 3PQHA 2YSFA 4U86A 2JX8A 5E66A 2ZQVA 2YSBA 1RP5A 1O6WA 3TDBA 2ZQUA 3LE4A 3NTPA 3CNGA 1TK7A 3ODKA 2DK1A 2MDIA 2JMFA 2EZ5W 4QIBA 5AHTA 3FSBA 3MCBA 2ZR6A 1WR7A 1EG4A 3TC5A 1WMVA 3L4HA 2YSHA 1FLCA 3MCBB 2KXQA 2RE3A 1EG3A 2XP4A 2ITKA 3M85A 2JXWA 1ZCNA 1TR8A 2DK7A 3KADA 4E5RA 2WAEA 2M8JA 2ZR5A 4A0UA 5E64A 4U85A 3MQGA 3OOBA 3FS8A 2XP8A 3KAHA 5U47A 3KCEA 3KAFA 5CQ2A 2QRVA 4GLXA 2XP7A 2YSGA 3M7NA 2Q5AA 2DWVA 2DJYA 4U84A 3KABA 3LKXA 3MQHA 2XP3A 2M8IA 1PINA 2ZR4A 4REXA 2XPAA 3KAGA 2OWOA 5E62A 3LKXB 2M3OW 2ZQSA 2ZAJA 1JMQA
chains in the Genus database with same CATH topology
2ZQTA 2BA1A 1K9QA 1F8AB 5E5WA 1YW5A 2XP9A 3TCZA 2LAJA 2YAJB 2WADA 3WH0A 2YSIA 2XP6A 1K9RA 2DMVA 5E65A 1I5HW 2XPBA 2F21A 2E45A 3KAIA 3FSCA 4A0TA 2JV4A 2XP5A 2Y8NB 1NMVA 2L4JA 3PQHA 2YSFA 4U86A 2JX8A 5E66A 2ZQVA 2YSBA 1RP5A 1O6WA 3TDBA 2ZQUA 3LE4A 3NTPA 3CNGA 1TK7A 3ODKA 2DK1A 2MDIA 2JMFA 2EZ5W 4QIBA 5AHTA 3FSBA 3MCBA 2ZR6A 1WR7A 1EG4A 3TC5A 1WMVA 3L4HA 2YSHA 1FLCA 3MCBB 2KXQA 2RE3A 1EG3A 2XP4A 2ITKA 3M85A 2JXWA 1ZCNA 1TR8A 2DK7A 3KADA 4E5RA 2WAEA 2M8JA 2ZR5A 4A0UA 5E64A 4U85A 3MQGA 3OOBA 3FS8A 2XP8A 3KAHA 5U47A 3KCEA 3KAFA 5CQ2A 2QRVA 4GLXA 2XP7A 2YSGA 3M7NA 2Q5AA 2DWVA 2DJYA 4U84A 3KABA 3LKXA 3MQHA 2XP3A 2M8IA 1PINA 2ZR4A 4REXA 2XPAA 3KAGA 2OWOA 5E62A 3LKXB 2M3OW 2ZQSA 2ZAJA 1JMQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ZQT A;  2BA1 A;  1K9Q A;  1F8A B;  1YW5 A;  2XP9 A;  3TCZ A;  2LAJ A;  3WH0 A;  2YSI A;  2XP6 A;  1K9R A;  2DMV A;  1I5H W;  2XPB A;  2F21 A;  2E45 A;  3KAI A;  2JV4 A;  2XP5 A;  1NMV A;  2L4J A;  2YSF A;  4U86 A;  2JX8 A;  2ZQV A;  2YSB A;  1O6W A;  3TDB A;  2ZQU A;  3LE4 A;  3NTP A;  3CNG A;  1TK7 A;  3ODK A;  2DK1 A;  2MDI A;  2JMF A;  2EZ5 W;  4QIB A;  5AHT A;  2ZR6 A;  1WR7 A;  1EG4 A;  3TC5 A;  1WMV A;  3L4H A;  2YSH A;  2KXQ A;  2RE3 A;  1EG3 A;  2XP4 A;  2ITK A;  3M85 A;  2JXW A;  1ZCN A;  2DK7 A;  3KAD A;  4E5R A;  2M8J A;  2ZR5 A;  4U85 A;  3OOB A;  2XP8 A;  3KAH A;  3KCE A;  3KAF A;  5CQ2 A;  2XP7 A;  2YSG A;  3M7N A;  2Q5A A;  2DWV A;  2DJY A;  4U84 A;  3KAB A;  2XP3 A;  2M8I A;  1PIN A;  2ZR4 A;  4REX A;  2XPA A;  3KAG A;  2M3O W;  2ZQS A;  2ZAJ A;  1JMQ A; 
#chains in the Genus database with same CATH topology
 2ZQT A;  2BA1 A;  1K9Q A;  1F8A B;  5E5W A;  1YW5 A;  2XP9 A;  3TCZ A;  2LAJ A;  2YAJ B;  2WAD A;  3WH0 A;  2YSI A;  2XP6 A;  1K9R A;  2DMV A;  5E65 A;  1I5H W;  2XPB A;  2F21 A;  2E45 A;  3KAI A;  3FSC A;  4A0T A;  2JV4 A;  2XP5 A;  2Y8N B;  1NMV A;  2L4J A;  3PQH A;  2YSF A;  4U86 A;  2JX8 A;  5E66 A;  2ZQV A;  2YSB A;  1RP5 A;  1O6W A;  3TDB A;  2ZQU A;  3LE4 A;  3NTP A;  3CNG A;  1TK7 A;  3ODK A;  2DK1 A;  2MDI A;  2JMF A;  2EZ5 W;  4QIB A;  5AHT A;  3FSB A;  3MCB A;  2ZR6 A;  1WR7 A;  1EG4 A;  3TC5 A;  1WMV A;  3L4H A;  2YSH A;  1FLC A;  3MCB B;  2KXQ A;  2RE3 A;  1EG3 A;  2XP4 A;  2ITK A;  3M85 A;  2JXW A;  1ZCN A;  1TR8 A;  2DK7 A;  3KAD A;  4E5R A;  2WAE A;  2M8J A;  2ZR5 A;  4A0U A;  5E64 A;  4U85 A;  3MQG A;  3OOB A;  3FS8 A;  2XP8 A;  3KAH A;  5U47 A;  3KCE A;  3KAF A;  5CQ2 A;  2QRV A;  4GLX A;  2XP7 A;  2YSG A;  3M7N A;  2Q5A A;  2DWV A;  2DJY A;  4U84 A;  3KAB A;  3LKX A;  3MQH A;  2XP3 A;  2M8I A;  1PIN A;  2ZR4 A;  4REX A;  2XPA A;  3KAG A;  2OWO A;  5E62 A;  3LKX B;  2M3O W;  2ZQS A;  2ZAJ A;  1JMQ A; 
#chains in the Genus database with same CATH homology
 2ZQT A;  2BA1 A;  1K9Q A;  1F8A B;  5E5W A;  1YW5 A;  2XP9 A;  3TCZ A;  2LAJ A;  2YAJ B;  2WAD A;  3WH0 A;  2YSI A;  2XP6 A;  1K9R A;  2DMV A;  5E65 A;  1I5H W;  2XPB A;  2F21 A;  2E45 A;  3KAI A;  3FSC A;  4A0T A;  2JV4 A;  2XP5 A;  2Y8N B;  1NMV A;  2L4J A;  3PQH A;  2YSF A;  4U86 A;  2JX8 A;  5E66 A;  2ZQV A;  2YSB A;  1RP5 A;  1O6W A;  3TDB A;  2ZQU A;  3LE4 A;  3NTP A;  3CNG A;  1TK7 A;  3ODK A;  2DK1 A;  2MDI A;  2JMF A;  2EZ5 W;  4QIB A;  5AHT A;  3FSB A;  3MCB A;  2ZR6 A;  1WR7 A;  1EG4 A;  3TC5 A;  1WMV A;  3L4H A;  2YSH A;  1FLC A;  3MCB B;  2KXQ A;  2RE3 A;  1EG3 A;  2XP4 A;  2ITK A;  3M85 A;  2JXW A;  1ZCN A;  1TR8 A;  2DK7 A;  3KAD A;  4E5R A;  2WAE A;  2M8J A;  2ZR5 A;  4A0U A;  5E64 A;  4U85 A;  3MQG A;  3OOB A;  3FS8 A;  2XP8 A;  3KAH A;  5U47 A;  3KCE A;  3KAF A;  5CQ2 A;  2QRV A;  4GLX A;  2XP7 A;  2YSG A;  3M7N A;  2Q5A A;  2DWV A;  2DJY A;  4U84 A;  3KAB A;  3LKX A;  3MQH A;  2XP3 A;  2M8I A;  1PIN A;  2ZR4 A;  4REX A;  2XPA A;  3KAG A;  2OWO A;  5E62 A;  3LKX B;  2M3O W;  2ZQS A;  2ZAJ A;  1JMQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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