2M3OW

Structure and dynamics of a human nedd4 ww domain-enac complex
Total Genus 4
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
4
sequence length
43
structure length
43
Chain Sequence
GSMEQGFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIPA
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Peptide binding protein/protein binding
source organism Homo sapiens
publication title Structure and dynamics of human Nedd4-1 WW3 in complex with the alpha ENaC PY motif.
pubmed doi rcsb
molecule keywords E3 ubiquitin-protein ligase NEDD4
total genus 4
structure length 43
sequence length 43
ec nomenclature ec 2.3.2.26: HECT-type E3 ubiquitin transferase.
pdb deposition date 2013-01-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
W PF00397 WW WW domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.10 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 2m3oW01
3KAGA 1ZCNA 2DK7A 3KABA 3WH0A 2YSIA 3TC5A 2ZQVA 1K9QA 2LAJA 2DJYA 3TDBA 3KADA 2JX8A 3L4HA 2DK1A 2JMFA 2ZQSA 3KAHA 2ZR5A 2XPBA 2KXQA 1JMQA 2DMVA 2M3OW 2JXWA 3ODKA 2ITKA 1WR7A 1WMVA 2L4JA 2ZR6A 1I5HW 1EG3A 2XP3A 2XP4A 2M8IA 2YSFA 3CNGA 3LE4A 2E45A 4E5RA 2YSHA 1NMVA 2XP6A 2XP9A 2XPAA 2Q5AA 2YSBA 3KCEA 3KAIA 3KAFA 3M85A 4U86A 2DWVA 1TK7A 2JV4A 3OOBA 4REXA 1K9RA 4U85A 2ZAJA 1F8AB 2XP8A 2M8JA 5CQ2A 2ZQUA 3TCZA 2YSGA 1EG4A 1O6WA 2ZQTA 1PINA 2MDIA 1YW5A 2RE3A 5AHTA 3M7NA 2BA1A 2ZR4A 4U84A 2XP5A 2XP7A 2EZ5W 4QIBA 2F21A 3NTPA
chains in the Genus database with same CATH superfamily
3KAGA 1ZCNA 2DK7A 3KABA 3WH0A 2YSIA 5E65A 3FSCA 5U47A 3TC5A 2ZQVA 3FSBA 1K9QA 5E66A 2LAJA 2DJYA 3TDBA 3KADA 2JX8A 3L4HA 2DK1A 2JMFA 2ZQSA 3LKXA 3KAHA 2ZR5A 2XPBA 2YAJB 2KXQA 1JMQA 2DMVA 2M3OW 2JXWA 3ODKA 2ITKA 1WR7A 5E64A 1WMVA 2L4JA 3PQHA 2ZR6A 1I5HW 1EG3A 2XP3A 2OWOA 2XP4A 2M8IA 2YSFA 3CNGA 3LE4A 2E45A 1RP5A 4A0TA 2QRVA 4E5RA 2YSHA 1NMVA 2XP6A 2WAEA 2XP9A 2XPAA 2Q5AA 2YSBA 3KCEA 3KAIA 3KAFA 3M85A 4U86A 2DWVA 1TK7A 2JV4A 3MQHA 3OOBA 4REXA 1K9RA 3MQGA 4U85A 2ZAJA 1F8AB 5E62A 2XP8A 2M8JA 1FLCA 5CQ2A 2WADA 2ZQUA 5E5WA 3TCZA 2YSGA 1EG4A 1O6WA 1TR8A 2ZQTA 3MCBB 4A0UA 1PINA 2MDIA 1YW5A 2RE3A 5AHTA 3M7NA 4GLXA 2BA1A 2ZR4A 4U84A 2XP5A 2XP7A 3FS8A 2EZ5W 4QIBA 2Y8NB 2F21A 3MCBA 3NTPA 3LKXB
chains in the Genus database with same CATH topology
3KAGA 1ZCNA 2DK7A 3KABA 3WH0A 2YSIA 5E65A 3FSCA 5U47A 3TC5A 2ZQVA 3FSBA 1K9QA 5E66A 2LAJA 2DJYA 3TDBA 3KADA 2JX8A 3L4HA 2DK1A 2JMFA 2ZQSA 3LKXA 3KAHA 2ZR5A 2XPBA 2YAJB 2KXQA 1JMQA 2DMVA 2M3OW 2JXWA 3ODKA 2ITKA 1WR7A 5E64A 1WMVA 2L4JA 3PQHA 2ZR6A 1I5HW 1EG3A 2XP3A 2OWOA 2XP4A 2M8IA 2YSFA 3CNGA 3LE4A 2E45A 1RP5A 4A0TA 2QRVA 4E5RA 2YSHA 1NMVA 2XP6A 2WAEA 2XP9A 2XPAA 2Q5AA 2YSBA 3KCEA 3KAIA 3KAFA 3M85A 4U86A 2DWVA 1TK7A 2JV4A 3MQHA 3OOBA 4REXA 1K9RA 3MQGA 4U85A 2ZAJA 1F8AB 5E62A 2XP8A 2M8JA 1FLCA 5CQ2A 2WADA 2ZQUA 5E5WA 3TCZA 2YSGA 1EG4A 1O6WA 1TR8A 2ZQTA 3MCBB 4A0UA 1PINA 2MDIA 1YW5A 2RE3A 5AHTA 3M7NA 4GLXA 2BA1A 2ZR4A 4U84A 2XP5A 2XP7A 3FS8A 2EZ5W 4QIBA 2Y8NB 2F21A 3MCBA 3NTPA 3LKXB
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KAG A;  1ZCN A;  2DK7 A;  3KAB A;  3WH0 A;  2YSI A;  3TC5 A;  2ZQV A;  1K9Q A;  2LAJ A;  2DJY A;  3TDB A;  3KAD A;  2JX8 A;  3L4H A;  2DK1 A;  2JMF A;  2ZQS A;  3KAH A;  2ZR5 A;  2XPB A;  2KXQ A;  1JMQ A;  2DMV A;  2M3O W;  2JXW A;  3ODK A;  2ITK A;  1WR7 A;  1WMV A;  2L4J A;  2ZR6 A;  1I5H W;  1EG3 A;  2XP3 A;  2XP4 A;  2M8I A;  2YSF A;  3CNG A;  3LE4 A;  2E45 A;  4E5R A;  2YSH A;  1NMV A;  2XP6 A;  2XP9 A;  2XPA A;  2Q5A A;  2YSB A;  3KCE A;  3KAI A;  3KAF A;  3M85 A;  4U86 A;  2DWV A;  1TK7 A;  2JV4 A;  3OOB A;  4REX A;  1K9R A;  4U85 A;  2ZAJ A;  1F8A B;  2XP8 A;  2M8J A;  5CQ2 A;  2ZQU A;  3TCZ A;  2YSG A;  1EG4 A;  1O6W A;  2ZQT A;  1PIN A;  2MDI A;  1YW5 A;  2RE3 A;  5AHT A;  3M7N A;  2BA1 A;  2ZR4 A;  4U84 A;  2XP5 A;  2XP7 A;  2EZ5 W;  4QIB A;  2F21 A;  3NTP A; 
#chains in the Genus database with same CATH topology
 3KAG A;  1ZCN A;  2DK7 A;  3KAB A;  3WH0 A;  2YSI A;  5E65 A;  3FSC A;  5U47 A;  3TC5 A;  2ZQV A;  3FSB A;  1K9Q A;  5E66 A;  2LAJ A;  2DJY A;  3TDB A;  3KAD A;  2JX8 A;  3L4H A;  2DK1 A;  2JMF A;  2ZQS A;  3LKX A;  3KAH A;  2ZR5 A;  2XPB A;  2YAJ B;  2KXQ A;  1JMQ A;  2DMV A;  2M3O W;  2JXW A;  3ODK A;  2ITK A;  1WR7 A;  5E64 A;  1WMV A;  2L4J A;  3PQH A;  2ZR6 A;  1I5H W;  1EG3 A;  2XP3 A;  2OWO A;  2XP4 A;  2M8I A;  2YSF A;  3CNG A;  3LE4 A;  2E45 A;  1RP5 A;  4A0T A;  2QRV A;  4E5R A;  2YSH A;  1NMV A;  2XP6 A;  2WAE A;  2XP9 A;  2XPA A;  2Q5A A;  2YSB A;  3KCE A;  3KAI A;  3KAF A;  3M85 A;  4U86 A;  2DWV A;  1TK7 A;  2JV4 A;  3MQH A;  3OOB A;  4REX A;  1K9R A;  3MQG A;  4U85 A;  2ZAJ A;  1F8A B;  5E62 A;  2XP8 A;  2M8J A;  1FLC A;  5CQ2 A;  2WAD A;  2ZQU A;  5E5W A;  3TCZ A;  2YSG A;  1EG4 A;  1O6W A;  1TR8 A;  2ZQT A;  3MCB B;  4A0U A;  1PIN A;  2MDI A;  1YW5 A;  2RE3 A;  5AHT A;  3M7N A;  4GLX A;  2BA1 A;  2ZR4 A;  4U84 A;  2XP5 A;  2XP7 A;  3FS8 A;  2EZ5 W;  4QIB A;  2Y8N B;  2F21 A;  3MCB A;  3NTP A;  3LKX B; 
#chains in the Genus database with same CATH homology
 3KAG A;  1ZCN A;  2DK7 A;  3KAB A;  3WH0 A;  2YSI A;  5E65 A;  3FSC A;  5U47 A;  3TC5 A;  2ZQV A;  3FSB A;  1K9Q A;  5E66 A;  2LAJ A;  2DJY A;  3TDB A;  3KAD A;  2JX8 A;  3L4H A;  2DK1 A;  2JMF A;  2ZQS A;  3LKX A;  3KAH A;  2ZR5 A;  2XPB A;  2YAJ B;  2KXQ A;  1JMQ A;  2DMV A;  2M3O W;  2JXW A;  3ODK A;  2ITK A;  1WR7 A;  5E64 A;  1WMV A;  2L4J A;  3PQH A;  2ZR6 A;  1I5H W;  1EG3 A;  2XP3 A;  2OWO A;  2XP4 A;  2M8I A;  2YSF A;  3CNG A;  3LE4 A;  2E45 A;  1RP5 A;  4A0T A;  2QRV A;  4E5R A;  2YSH A;  1NMV A;  2XP6 A;  2WAE A;  2XP9 A;  2XPA A;  2Q5A A;  2YSB A;  3KCE A;  3KAI A;  3KAF A;  3M85 A;  4U86 A;  2DWV A;  1TK7 A;  2JV4 A;  3MQH A;  3OOB A;  4REX A;  1K9R A;  3MQG A;  4U85 A;  2ZAJ A;  1F8A B;  5E62 A;  2XP8 A;  2M8J A;  1FLC A;  5CQ2 A;  2WAD A;  2ZQU A;  5E5W A;  3TCZ A;  2YSG A;  1EG4 A;  1O6W A;  1TR8 A;  2ZQT A;  3MCB B;  4A0U A;  1PIN A;  2MDI A;  1YW5 A;  2RE3 A;  5AHT A;  3M7N A;  4GLX A;  2BA1 A;  2ZR4 A;  4U84 A;  2XP5 A;  2XP7 A;  3FS8 A;  2EZ5 W;  4QIB A;  2Y8N B;  2F21 A;  3MCB A;  3NTP A;  3LKX B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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