5E62A

Hef-mut with tr323 complex
Total Genus 110
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
110
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords Hemagglutinin-esterase
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
total genus 110
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e62A01
5E66A 5E65A 5E64A 5E62A 5E5WA 1FLCA
chains in the Genus database with same CATH superfamily
2ZAJA 2RE3A 4E5RA 4A0TA 4U86A 2XPBA 2Y8NB 2M3OW 2XP5A 1RP5A 5E66A 3MQHA 3KCEA 4GLXA 1O6WA 2ZQSA 2JV4A 3TC5A 1WR7A 2ZQVA 3LE4A 3FS8A 3LKXA 2YSGA 3M85A 3FSBA 3NTPA 3FSCA 3TDBA 2M8IA 1EG3A 3KABA 3TCZA 1FLCA 4U84A 5E65A 4U85A 2OWOA 3CNGA 3KAFA 2ZQTA 2YSFA 1TR8A 3MCBB 2YSIA 1YW5A 1K9RA 3KADA 1TK7A 1F8AB 2JMFA 2XP6A 4A0UA 2ZR4A 3L4HA 3PQHA 2JXWA 3MQGA 2L4JA 2DMVA 1JMQA 2DWVA 3WH0A 2WADA 2M8JA 2BA1A 2YAJB 2LAJA 1PINA 5E64A 2Q5AA 2XP9A 2YSHA 2MDIA 5E5WA 3OOBA 2DK1A 3M7NA 2JX8A 2XP8A 2ZR5A 5AHTA 1K9QA 2ZQUA 5U47A 2ITKA 1EG4A 2KXQA 2ZR6A 1I5HW 3MCBA 3KAHA 2YSBA 4QIBA 3ODKA 2DK7A 3KAIA 2XP7A 4REXA 5CQ2A 2EZ5W 5E62A 1ZCNA 2E45A 2WAEA 3LKXB 1WMVA 2XP4A 2QRVA 2DJYA 2XPAA 1NMVA 2F21A 2XP3A 3KAGA
chains in the Genus database with same CATH topology
2ZAJA 2RE3A 4E5RA 4A0TA 4U86A 2XPBA 2Y8NB 2M3OW 2XP5A 1RP5A 5E66A 3MQHA 3KCEA 4GLXA 1O6WA 2ZQSA 2JV4A 3TC5A 1WR7A 2ZQVA 3LE4A 3FS8A 3LKXA 2YSGA 3M85A 3FSBA 3NTPA 3FSCA 3TDBA 2M8IA 1EG3A 3KABA 3TCZA 1FLCA 4U84A 5E65A 4U85A 2OWOA 3CNGA 3KAFA 2ZQTA 2YSFA 1TR8A 3MCBB 2YSIA 1YW5A 1K9RA 3KADA 1TK7A 1F8AB 2JMFA 2XP6A 4A0UA 2ZR4A 3L4HA 3PQHA 2JXWA 3MQGA 2L4JA 2DMVA 1JMQA 2DWVA 3WH0A 2WADA 2M8JA 2BA1A 2YAJB 2LAJA 1PINA 5E64A 2Q5AA 2XP9A 2YSHA 2MDIA 5E5WA 3OOBA 2DK1A 3M7NA 2JX8A 2XP8A 2ZR5A 5AHTA 1K9QA 2ZQUA 5U47A 2ITKA 1EG4A 2KXQA 2ZR6A 1I5HW 3MCBA 3KAHA 2YSBA 4QIBA 3ODKA 2DK7A 3KAIA 2XP7A 4REXA 5CQ2A 2EZ5W 5E62A 1ZCNA 2E45A 2WAEA 3LKXB 1WMVA 2XP4A 2QRVA 2DJYA 2XPAA 1NMVA 2F21A 2XP3A 3KAGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E66 A;  5E65 A;  5E64 A;  5E62 A;  5E5W A;  1FLC A; 
#chains in the Genus database with same CATH topology
 2ZAJ A;  2RE3 A;  4E5R A;  4A0T A;  4U86 A;  2XPB A;  2Y8N B;  2M3O W;  2XP5 A;  1RP5 A;  5E66 A;  3MQH A;  3KCE A;  4GLX A;  1O6W A;  2ZQS A;  2JV4 A;  3TC5 A;  1WR7 A;  2ZQV A;  3LE4 A;  3FS8 A;  3LKX A;  2YSG A;  3M85 A;  3FSB A;  3NTP A;  3FSC A;  3TDB A;  2M8I A;  1EG3 A;  3KAB A;  3TCZ A;  1FLC A;  4U84 A;  5E65 A;  4U85 A;  2OWO A;  3CNG A;  3KAF A;  2ZQT A;  2YSF A;  1TR8 A;  3MCB B;  2YSI A;  1YW5 A;  1K9R A;  3KAD A;  1TK7 A;  1F8A B;  2JMF A;  2XP6 A;  4A0U A;  2ZR4 A;  3L4H A;  3PQH A;  2JXW A;  3MQG A;  2L4J A;  2DMV A;  1JMQ A;  2DWV A;  3WH0 A;  2WAD A;  2M8J A;  2BA1 A;  2YAJ B;  2LAJ A;  1PIN A;  5E64 A;  2Q5A A;  2XP9 A;  2YSH A;  2MDI A;  5E5W A;  3OOB A;  2DK1 A;  3M7N A;  2JX8 A;  2XP8 A;  2ZR5 A;  5AHT A;  1K9Q A;  2ZQU A;  5U47 A;  2ITK A;  1EG4 A;  2KXQ A;  2ZR6 A;  1I5H W;  3MCB A;  3KAH A;  2YSB A;  4QIB A;  3ODK A;  2DK7 A;  3KAI A;  2XP7 A;  4REX A;  5CQ2 A;  2EZ5 W;  5E62 A;  1ZCN A;  2E45 A;  2WAE A;  3LKX B;  1WMV A;  2XP4 A;  2QRV A;  2DJY A;  2XPA A;  1NMV A;  2F21 A;  2XP3 A;  3KAG A; 
#chains in the Genus database with same CATH homology
 2ZAJ A;  2RE3 A;  4E5R A;  4A0T A;  4U86 A;  2XPB A;  2Y8N B;  2M3O W;  2XP5 A;  1RP5 A;  5E66 A;  3MQH A;  3KCE A;  4GLX A;  1O6W A;  2ZQS A;  2JV4 A;  3TC5 A;  1WR7 A;  2ZQV A;  3LE4 A;  3FS8 A;  3LKX A;  2YSG A;  3M85 A;  3FSB A;  3NTP A;  3FSC A;  3TDB A;  2M8I A;  1EG3 A;  3KAB A;  3TCZ A;  1FLC A;  4U84 A;  5E65 A;  4U85 A;  2OWO A;  3CNG A;  3KAF A;  2ZQT A;  2YSF A;  1TR8 A;  3MCB B;  2YSI A;  1YW5 A;  1K9R A;  3KAD A;  1TK7 A;  1F8A B;  2JMF A;  2XP6 A;  4A0U A;  2ZR4 A;  3L4H A;  3PQH A;  2JXW A;  3MQG A;  2L4J A;  2DMV A;  1JMQ A;  2DWV A;  3WH0 A;  2WAD A;  2M8J A;  2BA1 A;  2YAJ B;  2LAJ A;  1PIN A;  5E64 A;  2Q5A A;  2XP9 A;  2YSH A;  2MDI A;  5E5W A;  3OOB A;  2DK1 A;  3M7N A;  2JX8 A;  2XP8 A;  2ZR5 A;  5AHT A;  1K9Q A;  2ZQU A;  5U47 A;  2ITK A;  1EG4 A;  2KXQ A;  2ZR6 A;  1I5H W;  3MCB A;  3KAH A;  2YSB A;  4QIB A;  3ODK A;  2DK7 A;  3KAI A;  2XP7 A;  4REX A;  5CQ2 A;  2EZ5 W;  5E62 A;  1ZCN A;  2E45 A;  2WAE A;  3LKX B;  1WMV A;  2XP4 A;  2QRV A;  2DJY A;  2XPA A;  1NMV A;  2F21 A;  2XP3 A;  3KAG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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