3MCBA

Crystal structure of nac domains of human nascent polypeptide-associated complex (nac)
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
54
structure length
54
Chain Sequence
AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Chaperone
source organism Homo sapiens
publication title Crystal structures of NAC domains of human nascent polypeptide-associated complex (NAC) and its alphaNAC subunit
pubmed doi rcsb
molecule keywords Nascent polypeptide-associated complex subunit alpha
total genus 8
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 2010-03-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.30 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 3mcbA00
3LKXB 1TR8A 3MCBA 3MCBB 3LKXA
chains in the Genus database with same CATH superfamily
2JX8A 2ZQUA 2XP9A 3TCZA 2ZR4A 3WH0A 1O6WA 1TR8A 1FLCA 2XPBA 2ZQSA 3MQHA 4U85A 1EG3A 5AHTA 2BA1A 2DK7A 2KXQA 3KCEA 4E5RA 2YSGA 2WADA 3LKXB 2DMVA 4A0UA 3KAFA 3TDBA 1RP5A 5CQ2A 3FSBA 2DK1A 2XP6A 2XP8A 3KAGA 2YSIA 1NMVA 3PQHA 3L4HA 1ZCNA 3M7NA 2ZAJA 3KADA 2YSFA 5E65A 1JMQA 2ZR6A 2QRVA 1TK7A 5E62A 4REXA 2LAJA 2ITKA 5U47A 2Y8NB 1K9RA 2XP7A 2M8JA 1WR7A 3CNGA 2XP3A 3LKXA 2YSHA 1EG4A 2JMFA 4U84A 3MQGA 1PINA 3FSCA 5E5WA 2M8IA 2YSBA 3TC5A 2L4JA 3FS8A 2Q5AA 3ODKA 2ZR5A 1WMVA 2E45A 3KABA 3KAHA 4A0TA 3NTPA 4U86A 5E66A 3MCBB 2M3OW 2ZQTA 3MCBA 2F21A 3LE4A 2XP5A 2OWOA 1F8AB 2XPAA 2DJYA 2YAJB 4QIBA 3M85A 2MDIA 2RE3A 1I5HW 2JXWA 4GLXA 1YW5A 3KAIA 2DWVA 5E64A 2JV4A 2EZ5W 2WAEA 1K9QA 2ZQVA 2XP4A 3OOBA
chains in the Genus database with same CATH topology
2JX8A 2ZQUA 2XP9A 3TCZA 2ZR4A 3WH0A 1O6WA 1TR8A 1FLCA 2XPBA 2ZQSA 3MQHA 4U85A 1EG3A 5AHTA 2BA1A 2DK7A 2KXQA 3KCEA 4E5RA 2YSGA 2WADA 3LKXB 2DMVA 4A0UA 3KAFA 3TDBA 1RP5A 5CQ2A 3FSBA 2DK1A 2XP6A 2XP8A 3KAGA 2YSIA 1NMVA 3PQHA 3L4HA 1ZCNA 3M7NA 2ZAJA 3KADA 2YSFA 5E65A 1JMQA 2ZR6A 2QRVA 1TK7A 5E62A 4REXA 2LAJA 2ITKA 5U47A 2Y8NB 1K9RA 2XP7A 2M8JA 1WR7A 3CNGA 2XP3A 3LKXA 2YSHA 1EG4A 2JMFA 4U84A 3MQGA 1PINA 3FSCA 5E5WA 2M8IA 2YSBA 3TC5A 2L4JA 3FS8A 2Q5AA 3ODKA 2ZR5A 1WMVA 2E45A 3KABA 3KAHA 4A0TA 3NTPA 4U86A 5E66A 3MCBB 2M3OW 2ZQTA 3MCBA 2F21A 3LE4A 2XP5A 2OWOA 1F8AB 2XPAA 2DJYA 2YAJB 4QIBA 3M85A 2MDIA 2RE3A 1I5HW 2JXWA 4GLXA 1YW5A 3KAIA 2DWVA 5E64A 2JV4A 2EZ5W 2WAEA 1K9QA 2ZQVA 2XP4A 3OOBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LKX B;  1TR8 A;  3MCB A;  3MCB B;  3LKX A; 
#chains in the Genus database with same CATH topology
 2JX8 A;  2ZQU A;  2XP9 A;  3TCZ A;  2ZR4 A;  3WH0 A;  1O6W A;  1TR8 A;  1FLC A;  2XPB A;  2ZQS A;  3MQH A;  4U85 A;  1EG3 A;  5AHT A;  2BA1 A;  2DK7 A;  2KXQ A;  3KCE A;  4E5R A;  2YSG A;  2WAD A;  3LKX B;  2DMV A;  4A0U A;  3KAF A;  3TDB A;  1RP5 A;  5CQ2 A;  3FSB A;  2DK1 A;  2XP6 A;  2XP8 A;  3KAG A;  2YSI A;  1NMV A;  3PQH A;  3L4H A;  1ZCN A;  3M7N A;  2ZAJ A;  3KAD A;  2YSF A;  5E65 A;  1JMQ A;  2ZR6 A;  2QRV A;  1TK7 A;  5E62 A;  4REX A;  2LAJ A;  2ITK A;  5U47 A;  2Y8N B;  1K9R A;  2XP7 A;  2M8J A;  1WR7 A;  3CNG A;  2XP3 A;  3LKX A;  2YSH A;  1EG4 A;  2JMF A;  4U84 A;  3MQG A;  1PIN A;  3FSC A;  5E5W A;  2M8I A;  2YSB A;  3TC5 A;  2L4J A;  3FS8 A;  2Q5A A;  3ODK A;  2ZR5 A;  1WMV A;  2E45 A;  3KAB A;  3KAH A;  4A0T A;  3NTP A;  4U86 A;  5E66 A;  3MCB B;  2M3O W;  2ZQT A;  3MCB A;  2F21 A;  3LE4 A;  2XP5 A;  2OWO A;  1F8A B;  2XPA A;  2DJY A;  2YAJ B;  4QIB A;  3M85 A;  2MDI A;  2RE3 A;  1I5H W;  2JXW A;  4GLX A;  1YW5 A;  3KAI A;  2DWV A;  5E64 A;  2JV4 A;  2EZ5 W;  2WAE A;  1K9Q A;  2ZQV A;  2XP4 A;  3OOB A; 
#chains in the Genus database with same CATH homology
 2JX8 A;  2ZQU A;  2XP9 A;  3TCZ A;  2ZR4 A;  3WH0 A;  1O6W A;  1TR8 A;  1FLC A;  2XPB A;  2ZQS A;  3MQH A;  4U85 A;  1EG3 A;  5AHT A;  2BA1 A;  2DK7 A;  2KXQ A;  3KCE A;  4E5R A;  2YSG A;  2WAD A;  3LKX B;  2DMV A;  4A0U A;  3KAF A;  3TDB A;  1RP5 A;  5CQ2 A;  3FSB A;  2DK1 A;  2XP6 A;  2XP8 A;  3KAG A;  2YSI A;  1NMV A;  3PQH A;  3L4H A;  1ZCN A;  3M7N A;  2ZAJ A;  3KAD A;  2YSF A;  5E65 A;  1JMQ A;  2ZR6 A;  2QRV A;  1TK7 A;  5E62 A;  4REX A;  2LAJ A;  2ITK A;  5U47 A;  2Y8N B;  1K9R A;  2XP7 A;  2M8J A;  1WR7 A;  3CNG A;  2XP3 A;  3LKX A;  2YSH A;  1EG4 A;  2JMF A;  4U84 A;  3MQG A;  1PIN A;  3FSC A;  5E5W A;  2M8I A;  2YSB A;  3TC5 A;  2L4J A;  3FS8 A;  2Q5A A;  3ODK A;  2ZR5 A;  1WMV A;  2E45 A;  3KAB A;  3KAH A;  4A0T A;  3NTP A;  4U86 A;  5E66 A;  3MCB B;  2M3O W;  2ZQT A;  3MCB A;  2F21 A;  3LE4 A;  2XP5 A;  2OWO A;  1F8A B;  2XPA A;  2DJY A;  2YAJ B;  4QIB A;  3M85 A;  2MDI A;  2RE3 A;  1I5H W;  2JXW A;  4GLX A;  1YW5 A;  3KAI A;  2DWV A;  5E64 A;  2JV4 A;  2EZ5 W;  2WAE A;  1K9Q A;  2ZQV A;  2XP4 A;  3OOB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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