3MCBA

Crystal structure of nac domains of human nascent polypeptide-associated complex (nac)
Total Genus 8
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
54
structure length
54
Chain Sequence
AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Nascent polypeptide-associated complex subunit alpha
publication title Crystal structures of NAC domains of human nascent polypeptide-associated complex (NAC) and its alphaNAC subunit
pubmed doi rcsb
source organism Homo sapiens
molecule tags Chaperone
total genus 8
structure length 54
sequence length 54
ec nomenclature
pdb deposition date 2010-03-29
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.30 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 3mcbA00
3LKXA 3MCBA 3LKXB 3MCBB 1TR8A
chains in the Genus database with same CATH superfamily
2JX8A 1JMQA 5E64A 2MDIA 2WADA 1YW5A 1O6WA 2XP9A 4U86A 3TDBA 3KADA 2ZQTA 1EG4A 3FSBA 2XP7A 2Q5AA 3FS8A 3NTPA 4GLXA 2DK7A 2JXWA 2DMVA 1FLCA 3LKXA 2OWOA 3FSCA 2ZR5A 2YSBA 2XP6A 3KAFA 2ZQVA 3TCZA 1EG3A 2JMFA 4A0UA 3OOBA 3KAIA 3ODKA 3CNGA 2ZAJA 3M7NA 1TK7A 2BA1A 1RP5A 2YSHA 3LKXB 1F8AB 5E66A 1TR8A 1WR7A 2JV4A 3MCBA 3L4HA 3KABA 3KAHA 1K9QA 2F21A 3KCEA 5E65A 4U84A 2L4JA 2Y8NB 2XP3A 2YSIA 2DJYA 2EZ5W 3MCBB 1PINA 1I5HW 3KAGA 2M3OW 2YSGA 5E5WA 2E45A 2M8IA 2WAEA 3MQGA 2ZR6A 5AHTA 4REXA 4A0TA 2XP4A 3WH0A 1NMVA 5U47A 2XP8A 2ZQUA 3M85A 2DWVA 2DK1A 2ZR4A 2YAJB 2LAJA 2YSFA 1WMVA 1K9RA 3LE4A 3TC5A 3PQHA 2KXQA 2M8JA 2ZQSA 2RE3A 4U85A 5E62A 2XPAA 2ITKA 3MQHA 4QIBA 5CQ2A 2QRVA 2XPBA 4E5RA 2XP5A 1ZCNA
chains in the Genus database with same CATH topology
2JX8A 1JMQA 5E64A 2MDIA 2WADA 1YW5A 1O6WA 2XP9A 4U86A 3TDBA 3KADA 2ZQTA 1EG4A 3FSBA 2XP7A 2Q5AA 3FS8A 3NTPA 4GLXA 2DK7A 2JXWA 2DMVA 1FLCA 3LKXA 2OWOA 3FSCA 2ZR5A 2YSBA 2XP6A 3KAFA 2ZQVA 3TCZA 1EG3A 2JMFA 4A0UA 3OOBA 3KAIA 3ODKA 3CNGA 2ZAJA 3M7NA 1TK7A 2BA1A 1RP5A 2YSHA 3LKXB 1F8AB 5E66A 1TR8A 1WR7A 2JV4A 3MCBA 3L4HA 3KABA 3KAHA 1K9QA 2F21A 3KCEA 5E65A 4U84A 2L4JA 2Y8NB 2XP3A 2YSIA 2DJYA 2EZ5W 3MCBB 1PINA 1I5HW 3KAGA 2M3OW 2YSGA 5E5WA 2E45A 2M8IA 2WAEA 3MQGA 2ZR6A 5AHTA 4REXA 4A0TA 2XP4A 3WH0A 1NMVA 5U47A 2XP8A 2ZQUA 3M85A 2DWVA 2DK1A 2ZR4A 2YAJB 2LAJA 2YSFA 1WMVA 1K9RA 3LE4A 3TC5A 3PQHA 2KXQA 2M8JA 2ZQSA 2RE3A 4U85A 5E62A 2XPAA 2ITKA 3MQHA 4QIBA 5CQ2A 2QRVA 2XPBA 4E5RA 2XP5A 1ZCNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3LKX A;  3MCB A;  3LKX B;  3MCB B;  1TR8 A; 
#chains in the Genus database with same CATH topology
 2JX8 A;  1JMQ A;  5E64 A;  2MDI A;  2WAD A;  1YW5 A;  1O6W A;  2XP9 A;  4U86 A;  3TDB A;  3KAD A;  2ZQT A;  1EG4 A;  3FSB A;  2XP7 A;  2Q5A A;  3FS8 A;  3NTP A;  4GLX A;  2DK7 A;  2JXW A;  2DMV A;  1FLC A;  3LKX A;  2OWO A;  3FSC A;  2ZR5 A;  2YSB A;  2XP6 A;  3KAF A;  2ZQV A;  3TCZ A;  1EG3 A;  2JMF A;  4A0U A;  3OOB A;  3KAI A;  3ODK A;  3CNG A;  2ZAJ A;  3M7N A;  1TK7 A;  2BA1 A;  1RP5 A;  2YSH A;  3LKX B;  1F8A B;  5E66 A;  1TR8 A;  1WR7 A;  2JV4 A;  3MCB A;  3L4H A;  3KAB A;  3KAH A;  1K9Q A;  2F21 A;  3KCE A;  5E65 A;  4U84 A;  2L4J A;  2Y8N B;  2XP3 A;  2YSI A;  2DJY A;  2EZ5 W;  3MCB B;  1PIN A;  1I5H W;  3KAG A;  2M3O W;  2YSG A;  5E5W A;  2E45 A;  2M8I A;  2WAE A;  3MQG A;  2ZR6 A;  5AHT A;  4REX A;  4A0T A;  2XP4 A;  3WH0 A;  1NMV A;  5U47 A;  2XP8 A;  2ZQU A;  3M85 A;  2DWV A;  2DK1 A;  2ZR4 A;  2YAJ B;  2LAJ A;  2YSF A;  1WMV A;  1K9R A;  3LE4 A;  3TC5 A;  3PQH A;  2KXQ A;  2M8J A;  2ZQS A;  2RE3 A;  4U85 A;  5E62 A;  2XPA A;  2ITK A;  3MQH A;  4QIB A;  5CQ2 A;  2QRV A;  2XPB A;  4E5R A;  2XP5 A;  1ZCN A; 
#chains in the Genus database with same CATH homology
 2JX8 A;  1JMQ A;  5E64 A;  2MDI A;  2WAD A;  1YW5 A;  1O6W A;  2XP9 A;  4U86 A;  3TDB A;  3KAD A;  2ZQT A;  1EG4 A;  3FSB A;  2XP7 A;  2Q5A A;  3FS8 A;  3NTP A;  4GLX A;  2DK7 A;  2JXW A;  2DMV A;  1FLC A;  3LKX A;  2OWO A;  3FSC A;  2ZR5 A;  2YSB A;  2XP6 A;  3KAF A;  2ZQV A;  3TCZ A;  1EG3 A;  2JMF A;  4A0U A;  3OOB A;  3KAI A;  3ODK A;  3CNG A;  2ZAJ A;  3M7N A;  1TK7 A;  2BA1 A;  1RP5 A;  2YSH A;  3LKX B;  1F8A B;  5E66 A;  1TR8 A;  1WR7 A;  2JV4 A;  3MCB A;  3L4H A;  3KAB A;  3KAH A;  1K9Q A;  2F21 A;  3KCE A;  5E65 A;  4U84 A;  2L4J A;  2Y8N B;  2XP3 A;  2YSI A;  2DJY A;  2EZ5 W;  3MCB B;  1PIN A;  1I5H W;  3KAG A;  2M3O W;  2YSG A;  5E5W A;  2E45 A;  2M8I A;  2WAE A;  3MQG A;  2ZR6 A;  5AHT A;  4REX A;  4A0T A;  2XP4 A;  3WH0 A;  1NMV A;  5U47 A;  2XP8 A;  2ZQU A;  3M85 A;  2DWV A;  2DK1 A;  2ZR4 A;  2YAJ B;  2LAJ A;  2YSF A;  1WMV A;  1K9R A;  3LE4 A;  3TC5 A;  3PQH A;  2KXQ A;  2M8J A;  2ZQS A;  2RE3 A;  4U85 A;  5E62 A;  2XPA A;  2ITK A;  3MQH A;  4QIB A;  5CQ2 A;  2QRV A;  2XPB A;  4E5R A;  2XP5 A;  1ZCN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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