2KXQA

Solution structure of smurf2 ww2 and ww3 bound to smad7 py motif containing peptide
Total Genus 9

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
9
sequence length
90
structure length
90
Chain Sequence
GPLGGSPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSAN

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Protein binding
source organism Homo sapiens
publication title Coupling of tandem Smad ubiquitination regulatory factor (Smurf) WW domains modulates target specificity.
pubmed doi rcsb
molecule keywords E3 ubiquitin-protein ligase SMURF2
total genus 9
structure length 90
sequence length 90
ec nomenclature ec 2.3.2.26: HECT-type E3 ubiquitin transferase.
pdb deposition date 2010-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00397 WW WW domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.10 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 2kxqA01
2.20.70.10 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 2kxqA02
2F21A 2XP8A 2Q5AA 2EZ5W 1EG3A 2DJYA 2YSFA 3TC5A 1O6WA 5CQ2A 3TCZA 2XP4A 3L4HA 2M8IA 3OOBA 1NMVA 2XPBA 2DK1A 2YSBA 4U84A 2BA1A 2JXWA 4U85A 2JV4A 3KAGA 3KAIA 2DWVA 1TK7A 2ITKA 2YSIA 2YSGA 2ZQTA 2M3OW 4U86A 1YW5A 3KAHA 1I5HW 2XP5A 2ZAJA 1K9QA 3KADA 1WR7A 2LAJA 2ZQVA 2E45A 2XP9A 1EG4A 2KXQA 1K9RA 2ZR6A 3LE4A 2XP6A 4REXA 2RE3A 2YSHA 2JX8A 4QIBA 2M8JA 2MDIA 2ZQUA 2XP7A 4E5RA 1ZCNA 3KABA 2ZR4A 3NTPA 2XP3A 1PINA 1F8AB 2ZR5A 3M85A 3KAFA 2DMVA 2L4JA 2ZQSA 2XPAA 2DK7A 1WMVA 3KCEA 3WH0A 3TDBA 1JMQA 3ODKA 2JMFA 5AHTA 3M7NA 3CNGA
chains in the Genus database with same CATH superfamily
2F21A 2XP8A 2Q5AA 3FSCA 3FS8A 4A0TA 1FLCA 2EZ5W 1EG3A 2DJYA 2YSFA 5E62A 3TC5A 1O6WA 5CQ2A 3TCZA 2XP4A 3L4HA 2M8IA 3OOBA 3LKXB 1NMVA 2XPBA 2DK1A 2YSBA 5U47A 4U84A 2BA1A 2JXWA 4U85A 2JV4A 2Y8NB 3KAGA 3KAIA 2DWVA 1TK7A 2ITKA 2YSIA 3MCBB 2YSGA 2ZQTA 2OWOA 2M3OW 4U86A 1YW5A 3KAHA 1I5HW 2XP5A 2ZAJA 1K9QA 3KADA 1WR7A 2LAJA 2ZQVA 2E45A 2XP9A 1EG4A 2KXQA 3PQHA 1TR8A 2ZR6A 3LKXA 3LE4A 2XP6A 4REXA 1K9RA 2RE3A 2YSHA 2JX8A 4QIBA 5E65A 2M8JA 4GLXA 2MDIA 2ZQUA 5E64A 3MCBA 3MQHA 2XP7A 2WAEA 4E5RA 5E66A 1ZCNA 3KABA 3FSBA 2ZR4A 3MQGA 3NTPA 2XP3A 1PINA 1F8AB 2ZR5A 3M85A 3KAFA 2YAJB 2DMVA 5E5WA 1RP5A 2L4JA 2ZQSA 2XPAA 2DK7A 2QRVA 1WMVA 3KCEA 3WH0A 3TDBA 1JMQA 3ODKA 2JMFA 2WADA 5AHTA 3M7NA 3CNGA 4A0UA
chains in the Genus database with same CATH topology
2F21A 2XP8A 2Q5AA 3FSCA 3FS8A 4A0TA 1FLCA 2EZ5W 1EG3A 2DJYA 2YSFA 5E62A 3TC5A 1O6WA 5CQ2A 3TCZA 2XP4A 3L4HA 2M8IA 3OOBA 3LKXB 1NMVA 2XPBA 2DK1A 2YSBA 5U47A 4U84A 2BA1A 2JXWA 4U85A 2JV4A 2Y8NB 3KAGA 3KAIA 2DWVA 1TK7A 2ITKA 2YSIA 3MCBB 2YSGA 2ZQTA 2OWOA 2M3OW 4U86A 1YW5A 3KAHA 1I5HW 2XP5A 2ZAJA 1K9QA 3KADA 1WR7A 2LAJA 2ZQVA 2E45A 2XP9A 1EG4A 2KXQA 3PQHA 1TR8A 2ZR6A 3LKXA 3LE4A 2XP6A 4REXA 1K9RA 2RE3A 2YSHA 2JX8A 4QIBA 5E65A 2M8JA 4GLXA 2MDIA 2ZQUA 5E64A 3MCBA 3MQHA 2XP7A 2WAEA 4E5RA 5E66A 1ZCNA 3KABA 3FSBA 2ZR4A 3MQGA 3NTPA 2XP3A 1PINA 1F8AB 2ZR5A 3M85A 3KAFA 2YAJB 2DMVA 5E5WA 1RP5A 2L4JA 2ZQSA 2XPAA 2DK7A 2QRVA 1WMVA 3KCEA 3WH0A 3TDBA 1JMQA 3ODKA 2JMFA 2WADA 5AHTA 3M7NA 3CNGA 4A0UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2F21 A;  2XP8 A;  2Q5A A;  2EZ5 W;  1EG3 A;  2DJY A;  2YSF A;  3TC5 A;  1O6W A;  5CQ2 A;  3TCZ A;  2XP4 A;  3L4H A;  2M8I A;  3OOB A;  1NMV A;  2XPB A;  2DK1 A;  2YSB A;  4U84 A;  2BA1 A;  2JXW A;  4U85 A;  2JV4 A;  3KAG A;  3KAI A;  2DWV A;  1TK7 A;  2ITK A;  2YSI A;  2YSG A;  2ZQT A;  2M3O W;  4U86 A;  1YW5 A;  3KAH A;  1I5H W;  2XP5 A;  2ZAJ A;  1K9Q A;  3KAD A;  1WR7 A;  2LAJ A;  2ZQV A;  2E45 A;  2XP9 A;  1EG4 A;  2KXQ A;  1K9R A;  2ZR6 A;  3LE4 A;  2XP6 A;  4REX A;  2RE3 A;  2YSH A;  2JX8 A;  4QIB A;  2M8J A;  2MDI A;  2ZQU A;  2XP7 A;  4E5R A;  1ZCN A;  3KAB A;  2ZR4 A;  3NTP A;  2XP3 A;  1PIN A;  1F8A B;  2ZR5 A;  3M85 A;  3KAF A;  2DMV A;  2L4J A;  2ZQS A;  2XPA A;  2DK7 A;  1WMV A;  3KCE A;  3WH0 A;  3TDB A;  1JMQ A;  3ODK A;  2JMF A;  5AHT A;  3M7N A;  3CNG A; 
#chains in the Genus database with same CATH topology
 2F21 A;  2XP8 A;  2Q5A A;  3FSC A;  3FS8 A;  4A0T A;  1FLC A;  2EZ5 W;  1EG3 A;  2DJY A;  2YSF A;  5E62 A;  3TC5 A;  1O6W A;  5CQ2 A;  3TCZ A;  2XP4 A;  3L4H A;  2M8I A;  3OOB A;  3LKX B;  1NMV A;  2XPB A;  2DK1 A;  2YSB A;  5U47 A;  4U84 A;  2BA1 A;  2JXW A;  4U85 A;  2JV4 A;  2Y8N B;  3KAG A;  3KAI A;  2DWV A;  1TK7 A;  2ITK A;  2YSI A;  3MCB B;  2YSG A;  2ZQT A;  2OWO A;  2M3O W;  4U86 A;  1YW5 A;  3KAH A;  1I5H W;  2XP5 A;  2ZAJ A;  1K9Q A;  3KAD A;  1WR7 A;  2LAJ A;  2ZQV A;  2E45 A;  2XP9 A;  1EG4 A;  2KXQ A;  3PQH A;  1TR8 A;  2ZR6 A;  3LKX A;  3LE4 A;  2XP6 A;  4REX A;  1K9R A;  2RE3 A;  2YSH A;  2JX8 A;  4QIB A;  5E65 A;  2M8J A;  4GLX A;  2MDI A;  2ZQU A;  5E64 A;  3MCB A;  3MQH A;  2XP7 A;  2WAE A;  4E5R A;  5E66 A;  1ZCN A;  3KAB A;  3FSB A;  2ZR4 A;  3MQG A;  3NTP A;  2XP3 A;  1PIN A;  1F8A B;  2ZR5 A;  3M85 A;  3KAF A;  2YAJ B;  2DMV A;  5E5W A;  1RP5 A;  2L4J A;  2ZQS A;  2XPA A;  2DK7 A;  2QRV A;  1WMV A;  3KCE A;  3WH0 A;  3TDB A;  1JMQ A;  3ODK A;  2JMF A;  2WAD A;  5AHT A;  3M7N A;  3CNG A;  4A0U A; 
#chains in the Genus database with same CATH homology
 2F21 A;  2XP8 A;  2Q5A A;  3FSC A;  3FS8 A;  4A0T A;  1FLC A;  2EZ5 W;  1EG3 A;  2DJY A;  2YSF A;  5E62 A;  3TC5 A;  1O6W A;  5CQ2 A;  3TCZ A;  2XP4 A;  3L4H A;  2M8I A;  3OOB A;  3LKX B;  1NMV A;  2XPB A;  2DK1 A;  2YSB A;  5U47 A;  4U84 A;  2BA1 A;  2JXW A;  4U85 A;  2JV4 A;  2Y8N B;  3KAG A;  3KAI A;  2DWV A;  1TK7 A;  2ITK A;  2YSI A;  3MCB B;  2YSG A;  2ZQT A;  2OWO A;  2M3O W;  4U86 A;  1YW5 A;  3KAH A;  1I5H W;  2XP5 A;  2ZAJ A;  1K9Q A;  3KAD A;  1WR7 A;  2LAJ A;  2ZQV A;  2E45 A;  2XP9 A;  1EG4 A;  2KXQ A;  3PQH A;  1TR8 A;  2ZR6 A;  3LKX A;  3LE4 A;  2XP6 A;  4REX A;  1K9R A;  2RE3 A;  2YSH A;  2JX8 A;  4QIB A;  5E65 A;  2M8J A;  4GLX A;  2MDI A;  2ZQU A;  5E64 A;  3MCB A;  3MQH A;  2XP7 A;  2WAE A;  4E5R A;  5E66 A;  1ZCN A;  3KAB A;  3FSB A;  2ZR4 A;  3MQG A;  3NTP A;  2XP3 A;  1PIN A;  1F8A B;  2ZR5 A;  3M85 A;  3KAF A;  2YAJ B;  2DMV A;  5E5W A;  1RP5 A;  2L4J A;  2ZQS A;  2XPA A;  2DK7 A;  2QRV A;  1WMV A;  3KCE A;  3WH0 A;  3TDB A;  1JMQ A;  3ODK A;  2JMF A;  2WAD A;  5AHT A;  3M7N A;  3CNG A;  4A0U A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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