5E62A

Hef-mut with tr323 complex
Total Genus 110
50100150200250300350400020406080100
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
110
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
molecule tags Hydrolase
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
molecule keywords Hemagglutinin-esterase
total genus 110
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e62A01
5E64A 5E65A 5E62A 1FLCA 5E5WA 5E66A
chains in the Genus database with same CATH superfamily
2JV4A 1NMVA 2ZQVA 4U84A 2RE3A 2E45A 1RP5A 2JMFA 2WADA 1I5HW 4A0UA 3MQGA 2DK1A 2EZ5W 5E64A 2KXQA 3LKXB 2YSIA 2ZR4A 2BA1A 3KAHA 1WMVA 2XP3A 4GLXA 3KAGA 2XP7A 3LKXA 2F21A 1PINA 1K9QA 1TR8A 2DJYA 5E5WA 5E66A 2DK7A 2YSGA 3TC5A 3M85A 2MDIA 2YSFA 3L4HA 1WR7A 4U85A 3MQHA 3KAIA 3M7NA 2M3OW 4U86A 1K9RA 3MCBB 2M8JA 1EG4A 1FLCA 1ZCNA 1JMQA 4E5RA 5E65A 2OWOA 3TDBA 2Q5AA 2ZQUA 3CNGA 3FSBA 3KAFA 3MCBA 1F8AB 2XP8A 5U47A 2XP9A 3NTPA 2YSBA 2XP5A 4QIBA 2XP6A 2ITKA 3ODKA 2WAEA 2DWVA 2LAJA 2ZQTA 2YSHA 2ZR5A 5AHTA 2L4JA 2YAJB 3KCEA 3TCZA 2ZAJA 5E62A 2Y8NB 3KABA 4REXA 2XPBA 3OOBA 2M8IA 2DMVA 2XPAA 1O6WA 3PQHA 1TK7A 2QRVA 2JX8A 3FSCA 4A0TA 5CQ2A 2XP4A 3LE4A 2JXWA 3WH0A 2ZQSA 1EG3A 1YW5A 3FS8A 3KADA 2ZR6A
chains in the Genus database with same CATH topology
2JV4A 1NMVA 2ZQVA 4U84A 2RE3A 2E45A 1RP5A 2JMFA 2WADA 1I5HW 4A0UA 3MQGA 2DK1A 2EZ5W 5E64A 2KXQA 3LKXB 2YSIA 2ZR4A 2BA1A 3KAHA 1WMVA 2XP3A 4GLXA 3KAGA 2XP7A 3LKXA 2F21A 1PINA 1K9QA 1TR8A 2DJYA 5E5WA 5E66A 2DK7A 2YSGA 3TC5A 3M85A 2MDIA 2YSFA 3L4HA 1WR7A 4U85A 3MQHA 3KAIA 3M7NA 2M3OW 4U86A 1K9RA 3MCBB 2M8JA 1EG4A 1FLCA 1ZCNA 1JMQA 4E5RA 5E65A 2OWOA 3TDBA 2Q5AA 2ZQUA 3CNGA 3FSBA 3KAFA 3MCBA 1F8AB 2XP8A 5U47A 2XP9A 3NTPA 2YSBA 2XP5A 4QIBA 2XP6A 2ITKA 3ODKA 2WAEA 2DWVA 2LAJA 2ZQTA 2YSHA 2ZR5A 5AHTA 2L4JA 2YAJB 3KCEA 3TCZA 2ZAJA 5E62A 2Y8NB 3KABA 4REXA 2XPBA 3OOBA 2M8IA 2DMVA 2XPAA 1O6WA 3PQHA 1TK7A 2QRVA 2JX8A 3FSCA 4A0TA 5CQ2A 2XP4A 3LE4A 2JXWA 3WH0A 2ZQSA 1EG3A 1YW5A 3FS8A 3KADA 2ZR6A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 5E64 A;  5E65 A;  5E62 A;  1FLC A;  5E5W A;  5E66 A; 
#chains in the Genus database with same CATH topology
 2JV4 A;  1NMV A;  2ZQV A;  4U84 A;  2RE3 A;  2E45 A;  1RP5 A;  2JMF A;  2WAD A;  1I5H W;  4A0U A;  3MQG A;  2DK1 A;  2EZ5 W;  5E64 A;  2KXQ A;  3LKX B;  2YSI A;  2ZR4 A;  2BA1 A;  3KAH A;  1WMV A;  2XP3 A;  4GLX A;  3KAG A;  2XP7 A;  3LKX A;  2F21 A;  1PIN A;  1K9Q A;  1TR8 A;  2DJY A;  5E5W A;  5E66 A;  2DK7 A;  2YSG A;  3TC5 A;  3M85 A;  2MDI A;  2YSF A;  3L4H A;  1WR7 A;  4U85 A;  3MQH A;  3KAI A;  3M7N A;  2M3O W;  4U86 A;  1K9R A;  3MCB B;  2M8J A;  1EG4 A;  1FLC A;  1ZCN A;  1JMQ A;  4E5R A;  5E65 A;  2OWO A;  3TDB A;  2Q5A A;  2ZQU A;  3CNG A;  3FSB A;  3KAF A;  3MCB A;  1F8A B;  2XP8 A;  5U47 A;  2XP9 A;  3NTP A;  2YSB A;  2XP5 A;  4QIB A;  2XP6 A;  2ITK A;  3ODK A;  2WAE A;  2DWV A;  2LAJ A;  2ZQT A;  2YSH A;  2ZR5 A;  5AHT A;  2L4J A;  2YAJ B;  3KCE A;  3TCZ A;  2ZAJ A;  5E62 A;  2Y8N B;  3KAB A;  4REX A;  2XPB A;  3OOB A;  2M8I A;  2DMV A;  2XPA A;  1O6W A;  3PQH A;  1TK7 A;  2QRV A;  2JX8 A;  3FSC A;  4A0T A;  5CQ2 A;  2XP4 A;  3LE4 A;  2JXW A;  3WH0 A;  2ZQS A;  1EG3 A;  1YW5 A;  3FS8 A;  3KAD A;  2ZR6 A; 
#chains in the Genus database with same CATH homology
 2JV4 A;  1NMV A;  2ZQV A;  4U84 A;  2RE3 A;  2E45 A;  1RP5 A;  2JMF A;  2WAD A;  1I5H W;  4A0U A;  3MQG A;  2DK1 A;  2EZ5 W;  5E64 A;  2KXQ A;  3LKX B;  2YSI A;  2ZR4 A;  2BA1 A;  3KAH A;  1WMV A;  2XP3 A;  4GLX A;  3KAG A;  2XP7 A;  3LKX A;  2F21 A;  1PIN A;  1K9Q A;  1TR8 A;  2DJY A;  5E5W A;  5E66 A;  2DK7 A;  2YSG A;  3TC5 A;  3M85 A;  2MDI A;  2YSF A;  3L4H A;  1WR7 A;  4U85 A;  3MQH A;  3KAI A;  3M7N A;  2M3O W;  4U86 A;  1K9R A;  3MCB B;  2M8J A;  1EG4 A;  1FLC A;  1ZCN A;  1JMQ A;  4E5R A;  5E65 A;  2OWO A;  3TDB A;  2Q5A A;  2ZQU A;  3CNG A;  3FSB A;  3KAF A;  3MCB A;  1F8A B;  2XP8 A;  5U47 A;  2XP9 A;  3NTP A;  2YSB A;  2XP5 A;  4QIB A;  2XP6 A;  2ITK A;  3ODK A;  2WAE A;  2DWV A;  2LAJ A;  2ZQT A;  2YSH A;  2ZR5 A;  5AHT A;  2L4J A;  2YAJ B;  3KCE A;  3TCZ A;  2ZAJ A;  5E62 A;  2Y8N B;  3KAB A;  4REX A;  2XPB A;  3OOB A;  2M8I A;  2DMV A;  2XPA A;  1O6W A;  3PQH A;  1TK7 A;  2QRV A;  2JX8 A;  3FSC A;  4A0T A;  5CQ2 A;  2XP4 A;  3LE4 A;  2JXW A;  3WH0 A;  2ZQS A;  1EG3 A;  1YW5 A;  3FS8 A;  3KAD A;  2ZR6 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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