5E65A

The complex structure of hemagglutinin-esterase-fusion mutant protein from the influenza d virus with receptor analog 9-o-ac-3'sln (tr322)
Total Genus 119
50100150200250300350400020406080100120
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
427
structure length
424
Chain Sequence
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWIGFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYLYQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCMTLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQSATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGNLIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSYCFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEAADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQLKTDSGRIPTLPSGLIIPQAGTDS
50100150200250300350400400300200100
020406080100Genus Matrix

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Influenza d virus (d/swine/oklahoma/1334/2011)
publication title An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
pubmed doi rcsb
molecule keywords Hemagglutinin-esterase
total genus 119
structure length 424
sequence length 427
chains with identical sequence C
ec nomenclature
pdb deposition date 2015-10-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 5e65A01
5E66A 5E62A 5E5WA 5E64A 5E65A 1FLCA
chains in the Genus database with same CATH superfamily
2YSIA 1I5HW 2MDIA 3M85A 2XP5A 1FLCA 2DJYA 2DMVA 3FSBA 4A0TA 1NMVA 2EZ5W 5AHTA 2M8IA 2ZQTA 3KAHA 1JMQA 2XP9A 3ODKA 4REXA 2XPBA 3KAIA 2Y8NB 5E64A 2ZAJA 2DK1A 3LE4A 4U85A 2F21A 4QIBA 2XP6A 2RE3A 3LKXB 3WH0A 2M3OW 2XP4A 3FSCA 3MQGA 2ZR6A 2XP8A 2ZQSA 5U47A 3TCZA 1PINA 2QRVA 2YSHA 3L4HA 5E62A 1K9RA 3KAFA 2XP3A 2ZQUA 1TK7A 2ITKA 3MCBB 3KCEA 4U86A 3OOBA 1O6WA 4E5RA 5CQ2A 2WAEA 4A0UA 3KAGA 3M7NA 2ZR4A 1RP5A 1TR8A 3KADA 2DK7A 3TDBA 2L4JA 2ZQVA 5E5WA 1WMVA 2XPAA 4U84A 2JMFA 2JV4A 5E65A 3PQHA 1K9QA 5E66A 3MQHA 2JXWA 3MCBA 3NTPA 2Q5AA 2YSBA 2JX8A 3FS8A 2KXQA 2YAJB 2YSFA 3KABA 2XP7A 4GLXA 2WADA 2LAJA 3LKXA 1F8AB 1YW5A 1EG3A 2OWOA 2DWVA 2M8JA 2BA1A 1ZCNA 1WR7A 3CNGA 2ZR5A 1EG4A 3TC5A 2E45A 2YSGA
chains in the Genus database with same CATH topology
2YSIA 1I5HW 2MDIA 3M85A 2XP5A 1FLCA 2DJYA 2DMVA 3FSBA 4A0TA 1NMVA 2EZ5W 5AHTA 2M8IA 2ZQTA 3KAHA 1JMQA 2XP9A 3ODKA 4REXA 2XPBA 3KAIA 2Y8NB 5E64A 2ZAJA 2DK1A 3LE4A 4U85A 2F21A 4QIBA 2XP6A 2RE3A 3LKXB 3WH0A 2M3OW 2XP4A 3FSCA 3MQGA 2ZR6A 2XP8A 2ZQSA 5U47A 3TCZA 1PINA 2QRVA 2YSHA 3L4HA 5E62A 1K9RA 3KAFA 2XP3A 2ZQUA 1TK7A 2ITKA 3MCBB 3KCEA 4U86A 3OOBA 1O6WA 4E5RA 5CQ2A 2WAEA 4A0UA 3KAGA 3M7NA 2ZR4A 1RP5A 1TR8A 3KADA 2DK7A 3TDBA 2L4JA 2ZQVA 5E5WA 1WMVA 2XPAA 4U84A 2JMFA 2JV4A 5E65A 3PQHA 1K9QA 5E66A 3MQHA 2JXWA 3MCBA 3NTPA 2Q5AA 2YSBA 2JX8A 3FS8A 2KXQA 2YAJB 2YSFA 3KABA 2XP7A 4GLXA 2WADA 2LAJA 3LKXA 1F8AB 1YW5A 1EG3A 2OWOA 2DWVA 2M8JA 2BA1A 1ZCNA 1WR7A 3CNGA 2ZR5A 1EG4A 3TC5A 2E45A 2YSGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E66 A;  5E62 A;  5E5W A;  5E64 A;  5E65 A;  1FLC A; 
#chains in the Genus database with same CATH topology
 2YSI A;  1I5H W;  2MDI A;  3M85 A;  2XP5 A;  1FLC A;  2DJY A;  2DMV A;  3FSB A;  4A0T A;  1NMV A;  2EZ5 W;  5AHT A;  2M8I A;  2ZQT A;  3KAH A;  1JMQ A;  2XP9 A;  3ODK A;  4REX A;  2XPB A;  3KAI A;  2Y8N B;  5E64 A;  2ZAJ A;  2DK1 A;  3LE4 A;  4U85 A;  2F21 A;  4QIB A;  2XP6 A;  2RE3 A;  3LKX B;  3WH0 A;  2M3O W;  2XP4 A;  3FSC A;  3MQG A;  2ZR6 A;  2XP8 A;  2ZQS A;  5U47 A;  3TCZ A;  1PIN A;  2QRV A;  2YSH A;  3L4H A;  5E62 A;  1K9R A;  3KAF A;  2XP3 A;  2ZQU A;  1TK7 A;  2ITK A;  3MCB B;  3KCE A;  4U86 A;  3OOB A;  1O6W A;  4E5R A;  5CQ2 A;  2WAE A;  4A0U A;  3KAG A;  3M7N A;  2ZR4 A;  1RP5 A;  1TR8 A;  3KAD A;  2DK7 A;  3TDB A;  2L4J A;  2ZQV A;  5E5W A;  1WMV A;  2XPA A;  4U84 A;  2JMF A;  2JV4 A;  5E65 A;  3PQH A;  1K9Q A;  5E66 A;  3MQH A;  2JXW A;  3MCB A;  3NTP A;  2Q5A A;  2YSB A;  2JX8 A;  3FS8 A;  2KXQ A;  2YAJ B;  2YSF A;  3KAB A;  2XP7 A;  4GLX A;  2WAD A;  2LAJ A;  3LKX A;  1F8A B;  1YW5 A;  1EG3 A;  2OWO A;  2DWV A;  2M8J A;  2BA1 A;  1ZCN A;  1WR7 A;  3CNG A;  2ZR5 A;  1EG4 A;  3TC5 A;  2E45 A;  2YSG A; 
#chains in the Genus database with same CATH homology
 2YSI A;  1I5H W;  2MDI A;  3M85 A;  2XP5 A;  1FLC A;  2DJY A;  2DMV A;  3FSB A;  4A0T A;  1NMV A;  2EZ5 W;  5AHT A;  2M8I A;  2ZQT A;  3KAH A;  1JMQ A;  2XP9 A;  3ODK A;  4REX A;  2XPB A;  3KAI A;  2Y8N B;  5E64 A;  2ZAJ A;  2DK1 A;  3LE4 A;  4U85 A;  2F21 A;  4QIB A;  2XP6 A;  2RE3 A;  3LKX B;  3WH0 A;  2M3O W;  2XP4 A;  3FSC A;  3MQG A;  2ZR6 A;  2XP8 A;  2ZQS A;  5U47 A;  3TCZ A;  1PIN A;  2QRV A;  2YSH A;  3L4H A;  5E62 A;  1K9R A;  3KAF A;  2XP3 A;  2ZQU A;  1TK7 A;  2ITK A;  3MCB B;  3KCE A;  4U86 A;  3OOB A;  1O6W A;  4E5R A;  5CQ2 A;  2WAE A;  4A0U A;  3KAG A;  3M7N A;  2ZR4 A;  1RP5 A;  1TR8 A;  3KAD A;  2DK7 A;  3TDB A;  2L4J A;  2ZQV A;  5E5W A;  1WMV A;  2XPA A;  4U84 A;  2JMF A;  2JV4 A;  5E65 A;  3PQH A;  1K9Q A;  5E66 A;  3MQH A;  2JXW A;  3MCB A;  3NTP A;  2Q5A A;  2YSB A;  2JX8 A;  3FS8 A;  2KXQ A;  2YAJ B;  2YSF A;  3KAB A;  2XP7 A;  4GLX A;  2WAD A;  2LAJ A;  3LKX A;  1F8A B;  1YW5 A;  1EG3 A;  2OWO A;  2DWV A;  2M8J A;  2BA1 A;  1ZCN A;  1WR7 A;  3CNG A;  2ZR5 A;  1EG4 A;  3TC5 A;  2E45 A;  2YSG A; 
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