1AW8B

Pyruvoyl dependent aspartate decarboxylase
Total Genus 21
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
21
sequence length
90
structure length
90
Chain Sequence
CAIDQDFLDAAGILENEAIDIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWRPNVAYFEGDNEMK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Decarboxylase
molecule keywords L-ASPARTATE-ALPHA-DECARBOXYLASE
publication title Crystal structure of aspartate decarboxylase at 2.2 A resolution provides evidence for an ester in protein self-processing.
pubmed doi rcsb
source organism Escherichia coli
total genus 21
structure length 90
sequence length 90
chains with identical sequence E
ec nomenclature ec 4.1.1.11: Aspartate 1-decarboxylase.
pdb deposition date 1997-10-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.20 Mainly Beta Beta Barrel Barwin-like endoglucanases Barwin-like endoglucanases 1aw8B00
2PJHB 4CS0A 1PQHA 4AOKB 1E18A 2R92A 2VPXA 4KLNA 1PQFA 5T5ID 1E61A 4CRYG 4C2MA 4AAYA 5FTLA 1DMSA 3DMRA 5FTMA 2V45A 3CQZA 4AONB 1R7RA 3CF2A 2PMZA 5EPPA 5B6CA 2V3VA 1KQFA 4KODA 1Y5IA 2JIPA 3GTOA 3ML1A 1PT0A 1UHDA 2JIQA 3IR6A 3GTGA 1WLFA 3IR5A 1I3QA 2NAPA 1H5NA 3GTJA 1E60A 2KI8A 5FTJA 4CRZA 3GTMA 4DMRA 1TWGA 2E2IA 1I50A 2NVYA 5FTNA 3GTPA 1PQEA 4AYBA 4GA5A 3HKZA 1SIWA 1G8KA 2JA7A 1Y1VA 3O5AA 1PPYA 4AZDA 2IV2X 3GTQA 1WCMA 3FKIA 1TWHA 1OGYA 2YU9A 4QIWA 2VUMA 5T5MD 1VC3B 3QQ7A 2NVXA 1PYUB 3QQ8A 4RV0A 3TIWA 1AW8B 1DMRA 5DYGA 3QWZA 1EU1A 2NYAA 3PLXB 4KO8A 1CZ4A 4D7ZB 2VPWA 2DMRA 1TMOA 1FDIA 1E5VA 3OUGA 1R9TA 3HU2A 5FTKA 3HU3A 1PYQA 1G8JA 1CZ5A 3HU1A 1E32A 1QDNA 2JIMA 2VPYA 1K83A 2Y0SA 1UHEA 2EEOB 2JA5A 1YLEA 2R93A 1AA6A 1TWCA 2JIOA 1TWFA 3IR7A 1SFOA 2WAQA 3GTKA 1H0HA 2E2HA 5C1BA 1FDOA 2JIRA 1S3SA 1R27A 3TM7B 5C18A 2R7ZA 2JA6A 4KDIA 2WB1A 1Y1WA 3H0GA 1CR5A 1TWAA 5GLFA 2B63A 1IW7D 1PT1A 1Y4ZA 2E7ZA 3QC8A 1Q16A 3GTLA 5DYIA 4GA6A 2VPZA 1KQGA 4KDLA 1QCSA 2C45A
chains in the Genus database with same CATH superfamily
2PJHB 4JP6A 1PQHA 4CS0A 4AOKB 1E18A 3D30A 2R92A 2VPXA 1ZC1A 1PQFA 4KLNA 1E61A 5T5ID 4CRYG 4AAYA 4C2MA 5FTLA 4FG4A 1DMSA 3DMRA 5FTMA 2V45A 2PICA 3CQZA 4AONB 1L8FA 1R7RA 2PMZA 3CF2A 4JS7A 5EPPA 1HD5A 2V3VA 5B6CA 1KQFA 4KODA 1Y5IA 3X2OA 2JIPA 3GTOA 3ML1A 3SULA 2BE5D 1PT0A 1UHDA 2JIQA 1BW4A 4NOHA 3IR6A 3GTGA 3X2GA 1YNJD 2BH0A 5GLYA 1WLFA 2PNWA 3IR5A 3SUJA 1I3QA 2NAPA 5GM9A 1H5NA 2KQAA 3GTJA 1E60A 2KI8A 5FTJA 4CRZA 3SUKA 3X2IA 3GTMA 4DMRA 1TWGA 2E2IA 1I50A 2NVYA 5FTNA 3GTPA 1PQEA 4AYBA 4GA5A 1ZYRD 2GAEA 3HKZA 1SIWA 1G8KA 3X2LA 2JA7A 1Y1VA 1OA7A 1BW3A 3O5AA 1PPYA 4AZDA 4AVRA 4L48A 2IV2X 5H4UA 3GTQA 2CW0D 4ENGA 1WCMA 3FKIA 1TWHA 1OGYA 2YU9A 4QIWA 3X2JA 2VUMA 5T5MD 1VC3B 3SUMA 3QQ7A 2NVXA 1PYUB 3QQ8A 4RV0A 3TIWA 1AW8B 1OA9A 1DMRA 2YUJA 5DYGA 3QWZA 3CZBA 3M3GA 1EU1A 2NYAA 4JJOA 3PLXB 2G5DA 4KO8A 3X2NA 2PJJA 1CZ4A 4D7ZB 5GLXA 2VPWA 2DMRA 2G6GA 3X2PA 4JCWA 1SMYD 1TMOA 4FG2A 4FFTA 1FDIA 1E5VA 3OUGA 1R9TA 2HCZX 3HU2A 2A69D 5FTKA 3HU3A 1PYQA 1G8JA 1CZ5A 4FERA 3HU1A 1E32A 1QDNA 2JIMA 2VPYA 1K83A 2Y0SA 1UHEA 2EEOB 2JA5A 1YLEA 2R93A 1AA6A 4ZM7A 1TWCA 2O5JD 1WC2A 2JIOA 1TWFA 3IR7A 1SFOA 2WAQA 4JP7A 3GTKA 1H0HA 2E2HA 5C1BA 1FDOA 2A6HD 2JIRA 1S3SA 1R27A 3TM7B 3X2MA 5C18A 2R7ZA 4KDIA 1YNND 2JA6A 3ENGA 2WB1A 1Y1WA 3H0GA 1CR5A 1TWAA 2A6ED 2ENGA 5GLFA 2B63A 1IW7D 2PI8A 1PT1A 1Y4ZA 2E7ZA 3QC8A 1Q16A 1N10A 3X2KA 3X2HA 3GTLA 5DYIA 4GA6A 2VPZA 2AE0X 1KQGA 4KDLA 1QCSA 2C45A 2A68D
chains in the Genus database with same CATH topology
2PJHB 4CS0A 1PQHA 4AOKB 1E18A 2R92A 2VPXA 1ZC1A 1PQFA 4KLNA 1E61A 5T5ID 4CRYG 4AAYA 4C2MA 5FTLA 1DMSA 3DMRA 5FTMA 2V45A 2PICA 3CQZA 4AONB 1R7RA 2PMZA 3CF2A 5EPPA 5B6CA 2V3VA 1KQFA 4KODA 1Y5IA 2JIPA 3GTOA 3ML1A 2BE5D 1PT0A 1UHDA 2JIQA 4NOHA 3IR6A 3GTGA 1YNJD 1WLFA 2PNWA 3IR5A 1I3QA 2NAPA 1H5NA 3GTJA 1E60A 2KI8A 5FTJA 4CRZA 3GTMA 4DMRA 1TWGA 2E2IA 1I50A 2NVYA 5FTNA 3GTPA 1PQEA 4AYBA 4GA5A 1ZYRD 2GAEA 3HKZA 1SIWA 1G8KA 2JA7A 1Y1VA 3O5AA 1PPYA 4AZDA 2IV2X 3GTQA 2CW0D 1WCMA 3FKIA 1TWHA 1OGYA 2YU9A 4QIWA 2VUMA 5T5MD 1VC3B 3QQ7A 2NVXA 1PYUB 3QQ8A 4RV0A 3TIWA 1AW8B 1DMRA 2YUJA 5DYGA 3QWZA 3CZBA 1EU1A 2NYAA 3PLXB 2G5DA 4KO8A 2PJJA 1CZ4A 4D7ZB 2VPWA 2DMRA 2G6GA 1SMYD 1TMOA 1FDIA 1E5VA 3OUGA 1R9TA 3HU2A 2A69D 5FTKA 3HU3A 1PYQA 1G8JA 1CZ5A 3HU1A 1E32A 1QDNA 2JIMA 2VPYA 1K83A 2Y0SA 1UHEA 2EEOB 2JA5A 1YLEA 2R93A 1AA6A 1TWCA 2O5JD 2JIOA 1TWFA 3IR7A 1SFOA 2WAQA 3GTKA 1H0HA 2E2HA 5C1BA 1FDOA 2A6HD 2JIRA 1S3SA 1R27A 3TM7B 5C18A 2R7ZA 2JA6A 4KDIA 1YNND 2WB1A 1Y1WA 3H0GA 1CR5A 1TWAA 2A6ED 5GLFA 2B63A 1IW7D 2PI8A 1PT1A 1Y4ZA 2E7ZA 3QC8A 1Q16A 3GTLA 5DYIA 4GA6A 2VPZA 2AE0X 1KQGA 4KDLA 1QCSA 2C45A 2A68D
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PJH B;  4CS0 A;  1PQH A;  4AOK B;  1E18 A;  2R92 A;  2VPX A;  4KLN A;  1PQF A;  5T5I D;  1E61 A;  4CRY G;  4C2M A;  4AAY A;  5FTL A;  1DMS A;  3DMR A;  5FTM A;  2V45 A;  3CQZ A;  4AON B;  1R7R A;  3CF2 A;  2PMZ A;  5EPP A;  5B6C A;  2V3V A;  1KQF A;  4KOD A;  1Y5I A;  2JIP A;  3GTO A;  3ML1 A;  1PT0 A;  1UHD A;  2JIQ A;  3IR6 A;  3GTG A;  1WLF A;  3IR5 A;  1I3Q A;  2NAP A;  1H5N A;  3GTJ A;  1E60 A;  2KI8 A;  5FTJ A;  4CRZ A;  3GTM A;  4DMR A;  1TWG A;  2E2I A;  1I50 A;  2NVY A;  5FTN A;  3GTP A;  1PQE A;  4AYB A;  4GA5 A;  3HKZ A;  1SIW A;  1G8K A;  2JA7 A;  1Y1V A;  3O5A A;  1PPY A;  4AZD A;  2IV2 X;  3GTQ A;  1WCM A;  3FKI A;  1TWH A;  1OGY A;  2YU9 A;  4QIW A;  2VUM A;  5T5M D;  1VC3 B;  3QQ7 A;  2NVX A;  1PYU B;  3QQ8 A;  4RV0 A;  3TIW A;  1AW8 B;  1DMR A;  5DYG A;  3QWZ A;  1EU1 A;  2NYA A;  3PLX B;  4KO8 A;  1CZ4 A;  4D7Z B;  2VPW A;  2DMR A;  1TMO A;  1FDI A;  1E5V A;  3OUG A;  1R9T A;  3HU2 A;  5FTK A;  3HU3 A;  1PYQ A;  1G8J A;  1CZ5 A;  3HU1 A;  1E32 A;  1QDN A;  2JIM A;  2VPY A;  1K83 A;  2Y0S A;  1UHE A;  2EEO B;  2JA5 A;  1YLE A;  2R93 A;  1AA6 A;  1TWC A;  2JIO A;  1TWF A;  3IR7 A;  1SFO A;  2WAQ A;  3GTK A;  1H0H A;  2E2H A;  5C1B A;  1FDO A;  2JIR A;  1S3S A;  1R27 A;  3TM7 B;  5C18 A;  2R7Z A;  2JA6 A;  4KDI A;  2WB1 A;  1Y1W A;  3H0G A;  1CR5 A;  1TWA A;  5GLF A;  2B63 A;  1IW7 D;  1PT1 A;  1Y4Z A;  2E7Z A;  3QC8 A;  1Q16 A;  3GTL A;  5DYI A;  4GA6 A;  2VPZ A;  1KQG A;  4KDL A;  1QCS A;  2C45 A; 
#chains in the Genus database with same CATH topology
 2PJH B;  4JP6 A;  1PQH A;  4CS0 A;  4AOK B;  1E18 A;  3D30 A;  2R92 A;  2VPX A;  1ZC1 A;  1PQF A;  4KLN A;  1E61 A;  5T5I D;  4CRY G;  4AAY A;  4C2M A;  5FTL A;  4FG4 A;  1DMS A;  3DMR A;  5FTM A;  2V45 A;  2PIC A;  3CQZ A;  4AON B;  1L8F A;  1R7R A;  2PMZ A;  3CF2 A;  4JS7 A;  5EPP A;  1HD5 A;  2V3V A;  5B6C A;  1KQF A;  4KOD A;  1Y5I A;  3X2O A;  2JIP A;  3GTO A;  3ML1 A;  3SUL A;  2BE5 D;  1PT0 A;  1UHD A;  2JIQ A;  1BW4 A;  4NOH A;  3IR6 A;  3GTG A;  3X2G A;  1YNJ D;  2BH0 A;  5GLY A;  1WLF A;  2PNW A;  3IR5 A;  3SUJ A;  1I3Q A;  2NAP A;  5GM9 A;  1H5N A;  2KQA A;  3GTJ A;  1E60 A;  2KI8 A;  5FTJ A;  4CRZ A;  3SUK A;  3X2I A;  3GTM A;  4DMR A;  1TWG A;  2E2I A;  1I50 A;  2NVY A;  5FTN A;  3GTP A;  1PQE A;  4AYB A;  4GA5 A;  1ZYR D;  2GAE A;  3HKZ A;  1SIW A;  1G8K A;  3X2L A;  2JA7 A;  1Y1V A;  1OA7 A;  1BW3 A;  3O5A A;  1PPY A;  4AZD A;  4AVR A;  4L48 A;  2IV2 X;  5H4U A;  3GTQ A;  2CW0 D;  4ENG A;  1WCM A;  3FKI A;  1TWH A;  1OGY A;  2YU9 A;  4QIW A;  3X2J A;  2VUM A;  5T5M D;  1VC3 B;  3SUM A;  3QQ7 A;  2NVX A;  1PYU B;  3QQ8 A;  4RV0 A;  3TIW A;  1AW8 B;  1OA9 A;  1DMR A;  2YUJ A;  5DYG A;  3QWZ A;  3CZB A;  3M3G A;  1EU1 A;  2NYA A;  4JJO A;  3PLX B;  2G5D A;  4KO8 A;  3X2N A;  2PJJ A;  1CZ4 A;  4D7Z B;  5GLX A;  2VPW A;  2DMR A;  2G6G A;  3X2P A;  4JCW A;  1SMY D;  1TMO A;  4FG2 A;  4FFT A;  1FDI A;  1E5V A;  3OUG A;  1R9T A;  2HCZ X;  3HU2 A;  2A69 D;  5FTK A;  3HU3 A;  1PYQ A;  1G8J A;  1CZ5 A;  4FER A;  3HU1 A;  1E32 A;  1QDN A;  2JIM A;  2VPY A;  1K83 A;  2Y0S A;  1UHE A;  2EEO B;  2JA5 A;  1YLE A;  2R93 A;  1AA6 A;  4ZM7 A;  1TWC A;  2O5J D;  1WC2 A;  2JIO A;  1TWF A;  3IR7 A;  1SFO A;  2WAQ A;  4JP7 A;  3GTK A;  1H0H A;  2E2H A;  5C1B A;  1FDO A;  2A6H D;  2JIR A;  1S3S A;  1R27 A;  3TM7 B;  3X2M A;  5C18 A;  2R7Z A;  4KDI A;  1YNN D;  2JA6 A;  3ENG A;  2WB1 A;  1Y1W A;  3H0G A;  1CR5 A;  1TWA A;  2A6E D;  2ENG A;  5GLF A;  2B63 A;  1IW7 D;  2PI8 A;  1PT1 A;  1Y4Z A;  2E7Z A;  3QC8 A;  1Q16 A;  1N10 A;  3X2K A;  3X2H A;  3GTL A;  5DYI A;  4GA6 A;  2VPZ A;  2AE0 X;  1KQG A;  4KDL A;  1QCS A;  2C45 A;  2A68 D; 
#chains in the Genus database with same CATH homology
 2PJH B;  4CS0 A;  1PQH A;  4AOK B;  1E18 A;  2R92 A;  2VPX A;  1ZC1 A;  1PQF A;  4KLN A;  1E61 A;  5T5I D;  4CRY G;  4AAY A;  4C2M A;  5FTL A;  1DMS A;  3DMR A;  5FTM A;  2V45 A;  2PIC A;  3CQZ A;  4AON B;  1R7R A;  2PMZ A;  3CF2 A;  5EPP A;  5B6C A;  2V3V A;  1KQF A;  4KOD A;  1Y5I A;  2JIP A;  3GTO A;  3ML1 A;  2BE5 D;  1PT0 A;  1UHD A;  2JIQ A;  4NOH A;  3IR6 A;  3GTG A;  1YNJ D;  1WLF A;  2PNW A;  3IR5 A;  1I3Q A;  2NAP A;  1H5N A;  3GTJ A;  1E60 A;  2KI8 A;  5FTJ A;  4CRZ A;  3GTM A;  4DMR A;  1TWG A;  2E2I A;  1I50 A;  2NVY A;  5FTN A;  3GTP A;  1PQE A;  4AYB A;  4GA5 A;  1ZYR D;  2GAE A;  3HKZ A;  1SIW A;  1G8K A;  2JA7 A;  1Y1V A;  3O5A A;  1PPY A;  4AZD A;  2IV2 X;  3GTQ A;  2CW0 D;  1WCM A;  3FKI A;  1TWH A;  1OGY A;  2YU9 A;  4QIW A;  2VUM A;  5T5M D;  1VC3 B;  3QQ7 A;  2NVX A;  1PYU B;  3QQ8 A;  4RV0 A;  3TIW A;  1AW8 B;  1DMR A;  2YUJ A;  5DYG A;  3QWZ A;  3CZB A;  1EU1 A;  2NYA A;  3PLX B;  2G5D A;  4KO8 A;  2PJJ A;  1CZ4 A;  4D7Z B;  2VPW A;  2DMR A;  2G6G A;  1SMY D;  1TMO A;  1FDI A;  1E5V A;  3OUG A;  1R9T A;  3HU2 A;  2A69 D;  5FTK A;  3HU3 A;  1PYQ A;  1G8J A;  1CZ5 A;  3HU1 A;  1E32 A;  1QDN A;  2JIM A;  2VPY A;  1K83 A;  2Y0S A;  1UHE A;  2EEO B;  2JA5 A;  1YLE A;  2R93 A;  1AA6 A;  1TWC A;  2O5J D;  2JIO A;  1TWF A;  3IR7 A;  1SFO A;  2WAQ A;  3GTK A;  1H0H A;  2E2H A;  5C1B A;  1FDO A;  2A6H D;  2JIR A;  1S3S A;  1R27 A;  3TM7 B;  5C18 A;  2R7Z A;  2JA6 A;  4KDI A;  1YNN D;  2WB1 A;  1Y1W A;  3H0G A;  1CR5 A;  1TWA A;  2A6E D;  5GLF A;  2B63 A;  1IW7 D;  2PI8 A;  1PT1 A;  1Y4Z A;  2E7Z A;  3QC8 A;  1Q16 A;  3GTL A;  5DYI A;  4GA6 A;  2VPZ A;  2AE0 X;  1KQG A;  4KDL A;  1QCS A;  2C45 A;  2A68 D; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...