3X2KA

X-ray structure of pccel45a d114n with cellopentaose at 95k.
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2kA00
3SUKA 1BW3A 4JJOA 3X2NA 4FERA 3X2OA 4FG2A 2PICA 3SUMA 4JS7A 1N10A 4ZM7A 3X2GA 4L48A 3SUJA 2G6GA 1BW4A 2G5DA 1L8FA 5GLXA 3X2IA 2AE0X 2ENGA 3D30A 5H4UA 3X2KA 2HCZX 3X2LA 4FG4A 4ENGA 2KQAA 4JP7A 2PNWA 4FFTA 3X2PA 4AVRA 3SULA 1WC2A 2GAEA 4JCWA 3X2JA 2PJJA 3CZBA 4JP6A 5GLYA 2BH0A 1OA7A 3X2MA 2PI8A 1HD5A 3X2HA 5GM9A 1OA9A 3ENGA 3M3GA
chains in the Genus database with same CATH superfamily
1PT0A 3SUKA 2R93A 1DMRA 1G8JA 1PQFA 3X2NA 5FTLA 1Y5IA 2PJHB 2B63A 5DYGA 2PMZA 2JIRA 1YLEA 2V3VA 2JIOA 4KODA 2YU9A 3GTQA 1N10A 2A68D 3GTOA 1TWAA 3CF2A 1ZC1A 3ML1A 1UHDA 3TM7B 3X2GA 4CRYG 3GTJA 5EPPA 1Y1VA 2R7ZA 3QQ7A 1G8KA 1TMOA 3GTGA 3D30A 1YNND 1SMYD 1PYUB 2NAPA 1FDIA 3GTKA 2JIPA 2VPYA 2KQAA 5DYIA 2PNWA 4CS0A 3SULA 1AW8B 3HKZA 5FTNA 3X2JA 4JP6A 2BH0A 5GM9A 2KI8A 2E2HA 1E18A 3ENGA 3O5AA 2E2IA 1TWGA 5FTMA 3QC8A 1R7RA 2E7ZA 1VC3B 1WLFA 2C45A 4KO8A 4DMRA 4D7ZB 1E61A 5T5ID 2NVXA 5FTKA 1H5NA 4FG2A 2VPZA 2PICA 2VPXA 3SUMA 1Y1WA 4JS7A 4ZM7A 1H0HA 1Y4ZA 1K83A 2G5DA 1EU1A 1PT1A 2AE0X 2VPWA 2HCZX 1IW7D 4ENGA 1R9TA 1E5VA 2DMRA 4KDIA 4JP7A 4FFTA 4AYBA 2EEOB 4AOKB 3IR7A 2GAEA 4C2MA 5C18A 2YUJA 3HU1A 4QIWA 1HD5A 2A6HD 1QCSA 4AVRA 1CR5A 5GLXA 4GA6A 4CRZA 2R92A 1TWFA 2NVYA 2IV2X 1S3SA 4NOHA 3GTLA 4AONB 2JA7A 2JIQA 2NYAA 4AZDA 3X2OA 4RV0A 2WAQA 3FKIA 4L48A 1BW4A 1L8FA 2CW0D 5T5MD 2ENGA 3GTPA 5C1BA 2VUMA 1CZ5A 3IR6A 4KDLA 3X2LA 3QWZA 1KQFA 1ZYRD 1QDNA 3QQ8A 1PQHA 2A6ED 2PJJA 2WB1A 3CZBA 1OA7A 2Y0SA 3X2MA 1E32A 1AA6A 1SFOA 2O5JD 3H0GA 3M3GA 1PYQA 1BW3A 4JJOA 2JA5A 3IR5A 1I50A 1SIWA 1OGYA 1PPYA 1FDOA 1R27A 3OUGA 3PLXB 1YNJD 2BE5D 1TWHA 2JIMA 3HU2A 1CZ4A 3TIWA 1E60A 4GA5A 3SUJA 1PQEA 2G6GA 3X2IA 1Q16A 1UHEA 2V45A 5B6CA 1TWCA 3GTMA 3CQZA 5H4UA 2JA6A 3X2KA 4KLNA 4FG4A 2A69D 4AAYA 3X2PA 1WCMA 1WC2A 1I3QA 4JCWA 3DMRA 1DMSA 3HU3A 5FTJA 5GLYA 2PI8A 3X2HA 1KQGA 1OA9A 4FERA 5GLFA
chains in the Genus database with same CATH topology
3SUKA 1BW3A 4JJOA 3X2NA 4FERA 3X2OA 4FG2A 2PICA 3SUMA 4JS7A 1N10A 4ZM7A 3X2GA 4L48A 3SUJA 2G6GA 1BW4A 2G5DA 1L8FA 5GLXA 3X2IA 2AE0X 2ENGA 3D30A 5H4UA 3X2KA 2HCZX 3X2LA 4FG4A 4ENGA 2KQAA 4JP7A 2PNWA 4FFTA 3X2PA 4AVRA 3SULA 1WC2A 2GAEA 4JCWA 3X2JA 2PJJA 3CZBA 4JP6A 5GLYA 2BH0A 1OA7A 3X2MA 2PI8A 1HD5A 3X2HA 5GM9A 1OA9A 3ENGA 3M3GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3SUK A;  1BW3 A;  4JJO A;  3X2N A;  4FER A;  3X2O A;  4FG2 A;  2PIC A;  3SUM A;  4JS7 A;  1N10 A;  4ZM7 A;  3X2G A;  4L48 A;  3SUJ A;  2G6G A;  1BW4 A;  2G5D A;  1L8F A;  5GLX A;  3X2I A;  2AE0 X;  2ENG A;  3D30 A;  5H4U A;  3X2K A;  2HCZ X;  3X2L A;  4FG4 A;  4ENG A;  2KQA A;  4JP7 A;  2PNW A;  4FFT A;  3X2P A;  4AVR A;  3SUL A;  1WC2 A;  2GAE A;  4JCW A;  3X2J A;  2PJJ A;  3CZB A;  4JP6 A;  5GLY A;  2BH0 A;  1OA7 A;  3X2M A;  2PI8 A;  1HD5 A;  3X2H A;  5GM9 A;  1OA9 A;  3ENG A;  3M3G A; 
#chains in the Genus database with same CATH topology
 1PT0 A;  3SUK A;  2R93 A;  1DMR A;  1G8J A;  1PQF A;  3X2N A;  5FTL A;  1Y5I A;  2PJH B;  2B63 A;  5DYG A;  2PMZ A;  2JIR A;  1YLE A;  2V3V A;  2JIO A;  4KOD A;  2YU9 A;  3GTQ A;  1N10 A;  2A68 D;  3GTO A;  1TWA A;  3CF2 A;  1ZC1 A;  3ML1 A;  1UHD A;  3TM7 B;  3X2G A;  4CRY G;  3GTJ A;  5EPP A;  1Y1V A;  2R7Z A;  3QQ7 A;  1G8K A;  1TMO A;  3GTG A;  3D30 A;  1YNN D;  1SMY D;  1PYU B;  2NAP A;  1FDI A;  3GTK A;  2JIP A;  2VPY A;  2KQA A;  5DYI A;  2PNW A;  4CS0 A;  3SUL A;  1AW8 B;  3HKZ A;  5FTN A;  3X2J A;  4JP6 A;  2BH0 A;  5GM9 A;  2KI8 A;  2E2H A;  1E18 A;  3ENG A;  3O5A A;  2E2I A;  1TWG A;  5FTM A;  3QC8 A;  1R7R A;  2E7Z A;  1VC3 B;  1WLF A;  2C45 A;  4KO8 A;  4DMR A;  4D7Z B;  1E61 A;  5T5I D;  2NVX A;  5FTK A;  1H5N A;  4FG2 A;  2VPZ A;  2PIC A;  2VPX A;  3SUM A;  1Y1W A;  4JS7 A;  4ZM7 A;  1H0H A;  1Y4Z A;  1K83 A;  2G5D A;  1EU1 A;  1PT1 A;  2AE0 X;  2VPW A;  2HCZ X;  1IW7 D;  4ENG A;  1R9T A;  1E5V A;  2DMR A;  4KDI A;  4JP7 A;  4FFT A;  4AYB A;  2EEO B;  4AOK B;  3IR7 A;  2GAE A;  4C2M A;  5C18 A;  2YUJ A;  3HU1 A;  4QIW A;  1HD5 A;  2A6H D;  1QCS A;  4AVR A;  1CR5 A;  5GLX A;  4GA6 A;  4CRZ A;  2R92 A;  1TWF A;  2NVY A;  2IV2 X;  1S3S A;  4NOH A;  3GTL A;  4AON B;  2JA7 A;  2JIQ A;  2NYA A;  4AZD A;  3X2O A;  4RV0 A;  2WAQ A;  3FKI A;  4L48 A;  1BW4 A;  1L8F A;  2CW0 D;  5T5M D;  2ENG A;  3GTP A;  5C1B A;  2VUM A;  1CZ5 A;  3IR6 A;  4KDL A;  3X2L A;  3QWZ A;  1KQF A;  1ZYR D;  1QDN A;  3QQ8 A;  1PQH A;  2A6E D;  2PJJ A;  2WB1 A;  3CZB A;  1OA7 A;  2Y0S A;  3X2M A;  1E32 A;  1AA6 A;  1SFO A;  2O5J D;  3H0G A;  3M3G A;  1PYQ A;  1BW3 A;  4JJO A;  2JA5 A;  3IR5 A;  1I50 A;  1SIW A;  1OGY A;  1PPY A;  1FDO A;  1R27 A;  3OUG A;  3PLX B;  1YNJ D;  2BE5 D;  1TWH A;  2JIM A;  3HU2 A;  1CZ4 A;  3TIW A;  1E60 A;  4GA5 A;  3SUJ A;  1PQE A;  2G6G A;  3X2I A;  1Q16 A;  1UHE A;  2V45 A;  5B6C A;  1TWC A;  3GTM A;  3CQZ A;  5H4U A;  2JA6 A;  3X2K A;  4KLN A;  4FG4 A;  2A69 D;  4AAY A;  3X2P A;  1WCM A;  1WC2 A;  1I3Q A;  4JCW A;  3DMR A;  1DMS A;  3HU3 A;  5FTJ A;  5GLY A;  2PI8 A;  3X2H A;  1KQG A;  1OA9 A;  4FER A;  5GLF A; 
#chains in the Genus database with same CATH homology
 3SUK A;  1BW3 A;  4JJO A;  3X2N A;  4FER A;  3X2O A;  4FG2 A;  2PIC A;  3SUM A;  4JS7 A;  1N10 A;  4ZM7 A;  3X2G A;  4L48 A;  3SUJ A;  2G6G A;  1BW4 A;  2G5D A;  1L8F A;  5GLX A;  3X2I A;  2AE0 X;  2ENG A;  3D30 A;  5H4U A;  3X2K A;  2HCZ X;  3X2L A;  4FG4 A;  4ENG A;  2KQA A;  4JP7 A;  2PNW A;  4FFT A;  3X2P A;  4AVR A;  3SUL A;  1WC2 A;  2GAE A;  4JCW A;  3X2J A;  2PJJ A;  3CZB A;  4JP6 A;  5GLY A;  2BH0 A;  1OA7 A;  3X2M A;  2PI8 A;  1HD5 A;  3X2H A;  5GM9 A;  1OA9 A;  3ENG A;  3M3G A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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