3X2KA

X-ray structure of pccel45a d114n with cellopentaose at 95k.
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2kA00
4FG2A 3SUKA 1OA7A 3X2HA 5H4UA 3X2IA 3SULA 1L8FA 4JS7A 2BH0A 2PNWA 5GLXA 1OA9A 4L48A 1HD5A 4JP7A 4ZM7A 3X2OA 1WC2A 4JP6A 5GLYA 3M3GA 3X2NA 2PICA 4JJOA 3X2JA 2PJJA 2KQAA 1N10A 3D30A 2G6GA 2PI8A 3CZBA 3X2KA 4FG4A 3SUJA 4AVRA 3X2PA 1BW4A 2ENGA 2HCZX 2G5DA 4JCWA 2GAEA 5GM9A 4FFTA 3ENGA 4FERA 4ENGA 3X2GA 3X2MA 3X2LA 3SUMA 1BW3A 2AE0X
chains in the Genus database with same CATH superfamily
3X2HA 2JA5A 3QC8A 1TWAA 1YNND 2BH0A 4JS7A 5GLXA 1TWGA 1E5VA 4JP7A 4AZDA 1KQFA 2R93A 3O5AA 1YLEA 2E2HA 5GLYA 2JA6A 3HU2A 3GTPA 3X2NA 1H0HA 3FKIA 4JJOA 5T5MD 1FDIA 4C2MA 3PLXB 2IV2X 3HU1A 2JIQA 2PI8A 4AONB 3CZBA 1UHEA 3GTOA 1E18A 3GTLA 2VPXA 3GTMA 1BW4A 4DMRA 2WB1A 2A69D 4KDIA 4JCWA 1WCMA 1Y1VA 1CZ4A 1PQEA 3IR6A 3H0GA 1Y1WA 2JIPA 1G8KA 2V3VA 2JIOA 1AW8B 3X2GA 2VPWA 3HU3A 4FG2A 2A6ED 3ML1A 3X2IA 2B63A 1Y4ZA 4RV0A 1EU1A 1OA9A 4D7ZB 2DMRA 4ZM7A 1TWHA 2NYAA 1CR5A 5FTLA 1KQGA 3GTKA 5DYIA 2PICA 2VUMA 3D30A 1ZC1A 2KQAA 2G6GA 2JIMA 5DYGA 3SUJA 1DMRA 3DMRA 3X2PA 4CS0A 2ENGA 1PQHA 2HCZX 5GLFA 4CRZA 1YNJD 1E61A 1IW7D 3ENGA 4KLNA 4FERA 2YU9A 4AOKB 2PJHB 1R7RA 4KODA 3X2LA 3SUMA 1BW3A 4NOHA 1K83A 1PQFA 3QWZA 2WAQA 2A6HD 2R92A 2NAPA 3SUKA 5FTMA 2Y0SA 3SULA 5FTKA 1L8FA 2C45A 1FDOA 2PNWA 1TMOA 3IR5A 5B6CA 1AA6A 1HD5A 2KI8A 1S3SA 5C18A 1WC2A 2YUJA 2R7ZA 1OGYA 3M3GA 2CW0D 1H5NA 3CF2A 3X2JA 2PJJA 1E32A 4GA6A 3X2KA 1PT0A 4FG4A 4AVRA 3TM7B 1SFOA 1R9TA 5EPPA 4AAYA 2G5DA 3HKZA 2GAEA 4FFTA 4KDLA 2VPYA 4KO8A 2PMZA 2V45A 1E60A 4QIWA 5T5ID 4ENGA 3X2MA 1I50A 1PT1A 1R27A 5C1BA 3CQZA 2EEOB 3OUGA 5FTJA 1I3QA 1QDNA 1OA7A 1PYUB 5H4UA 3TIWA 3IR7A 2A68D 1Y5IA 1ZYRD 1G8JA 3GTGA 2NVXA 2NVYA 1DMSA 4L48A 1VC3B 1QCSA 1SIWA 1PYQA 3QQ7A 3X2OA 4CRYG 3GTQA 4JP6A 2BE5D 2E7ZA 1CZ5A 1PPYA 1N10A 5FTNA 3GTJA 1WLFA 2JIRA 3QQ8A 1SMYD 4AYBA 1TWCA 2O5JD 5GM9A 1TWFA 2VPZA 1Q16A 1UHDA 2E2IA 2JA7A 2AE0X 4GA5A
chains in the Genus database with same CATH topology
4FG2A 3SUKA 1OA7A 3X2HA 5H4UA 3X2IA 3SULA 1L8FA 4JS7A 2BH0A 2PNWA 5GLXA 1OA9A 4L48A 1HD5A 4JP7A 4ZM7A 3X2OA 1WC2A 4JP6A 5GLYA 3M3GA 3X2NA 2PICA 4JJOA 3X2JA 2PJJA 2KQAA 1N10A 3D30A 2G6GA 2PI8A 3CZBA 3X2KA 4FG4A 3SUJA 4AVRA 3X2PA 1BW4A 2ENGA 2HCZX 2G5DA 4JCWA 2GAEA 5GM9A 4FFTA 3ENGA 4FERA 4ENGA 3X2GA 3X2MA 3X2LA 3SUMA 1BW3A 2AE0X
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4FG2 A;  3SUK A;  1OA7 A;  3X2H A;  5H4U A;  3X2I A;  3SUL A;  1L8F A;  4JS7 A;  2BH0 A;  2PNW A;  5GLX A;  1OA9 A;  4L48 A;  1HD5 A;  4JP7 A;  4ZM7 A;  3X2O A;  1WC2 A;  4JP6 A;  5GLY A;  3M3G A;  3X2N A;  2PIC A;  4JJO A;  3X2J A;  2PJJ A;  2KQA A;  1N10 A;  3D30 A;  2G6G A;  2PI8 A;  3CZB A;  3X2K A;  4FG4 A;  3SUJ A;  4AVR A;  3X2P A;  1BW4 A;  2ENG A;  2HCZ X;  2G5D A;  4JCW A;  2GAE A;  5GM9 A;  4FFT A;  3ENG A;  4FER A;  4ENG A;  3X2G A;  3X2M A;  3X2L A;  3SUM A;  1BW3 A;  2AE0 X; 
#chains in the Genus database with same CATH topology
 3X2H A;  2JA5 A;  3QC8 A;  1TWA A;  1YNN D;  2BH0 A;  4JS7 A;  5GLX A;  1TWG A;  1E5V A;  4JP7 A;  4AZD A;  1KQF A;  2R93 A;  3O5A A;  1YLE A;  2E2H A;  5GLY A;  2JA6 A;  3HU2 A;  3GTP A;  3X2N A;  1H0H A;  3FKI A;  4JJO A;  5T5M D;  1FDI A;  4C2M A;  3PLX B;  2IV2 X;  3HU1 A;  2JIQ A;  2PI8 A;  4AON B;  3CZB A;  1UHE A;  3GTO A;  1E18 A;  3GTL A;  2VPX A;  3GTM A;  1BW4 A;  4DMR A;  2WB1 A;  2A69 D;  4KDI A;  4JCW A;  1WCM A;  1Y1V A;  1CZ4 A;  1PQE A;  3IR6 A;  3H0G A;  1Y1W A;  2JIP A;  1G8K A;  2V3V A;  2JIO A;  1AW8 B;  3X2G A;  2VPW A;  3HU3 A;  4FG2 A;  2A6E D;  3ML1 A;  3X2I A;  2B63 A;  1Y4Z A;  4RV0 A;  1EU1 A;  1OA9 A;  4D7Z B;  2DMR A;  4ZM7 A;  1TWH A;  2NYA A;  1CR5 A;  5FTL A;  1KQG A;  3GTK A;  5DYI A;  2PIC A;  2VUM A;  3D30 A;  1ZC1 A;  2KQA A;  2G6G A;  2JIM A;  5DYG A;  3SUJ A;  1DMR A;  3DMR A;  3X2P A;  4CS0 A;  2ENG A;  1PQH A;  2HCZ X;  5GLF A;  4CRZ A;  1YNJ D;  1E61 A;  1IW7 D;  3ENG A;  4KLN A;  4FER A;  2YU9 A;  4AOK B;  2PJH B;  1R7R A;  4KOD A;  3X2L A;  3SUM A;  1BW3 A;  4NOH A;  1K83 A;  1PQF A;  3QWZ A;  2WAQ A;  2A6H D;  2R92 A;  2NAP A;  3SUK A;  5FTM A;  2Y0S A;  3SUL A;  5FTK A;  1L8F A;  2C45 A;  1FDO A;  2PNW A;  1TMO A;  3IR5 A;  5B6C A;  1AA6 A;  1HD5 A;  2KI8 A;  1S3S A;  5C18 A;  1WC2 A;  2YUJ A;  2R7Z A;  1OGY A;  3M3G A;  2CW0 D;  1H5N A;  3CF2 A;  3X2J A;  2PJJ A;  1E32 A;  4GA6 A;  3X2K A;  1PT0 A;  4FG4 A;  4AVR A;  3TM7 B;  1SFO A;  1R9T A;  5EPP A;  4AAY A;  2G5D A;  3HKZ A;  2GAE A;  4FFT A;  4KDL A;  2VPY A;  4KO8 A;  2PMZ A;  2V45 A;  1E60 A;  4QIW A;  5T5I D;  4ENG A;  3X2M A;  1I50 A;  1PT1 A;  1R27 A;  5C1B A;  3CQZ A;  2EEO B;  3OUG A;  5FTJ A;  1I3Q A;  1QDN A;  1OA7 A;  1PYU B;  5H4U A;  3TIW A;  3IR7 A;  2A68 D;  1Y5I A;  1ZYR D;  1G8J A;  3GTG A;  2NVX A;  2NVY A;  1DMS A;  4L48 A;  1VC3 B;  1QCS A;  1SIW A;  1PYQ A;  3QQ7 A;  3X2O A;  4CRY G;  3GTQ A;  4JP6 A;  2BE5 D;  2E7Z A;  1CZ5 A;  1PPY A;  1N10 A;  5FTN A;  3GTJ A;  1WLF A;  2JIR A;  3QQ8 A;  1SMY D;  4AYB A;  1TWC A;  2O5J D;  5GM9 A;  1TWF A;  2VPZ A;  1Q16 A;  1UHD A;  2E2I A;  2JA7 A;  2AE0 X;  4GA5 A; 
#chains in the Genus database with same CATH homology
 4FG2 A;  3SUK A;  1OA7 A;  3X2H A;  5H4U A;  3X2I A;  3SUL A;  1L8F A;  4JS7 A;  2BH0 A;  2PNW A;  5GLX A;  1OA9 A;  4L48 A;  1HD5 A;  4JP7 A;  4ZM7 A;  3X2O A;  1WC2 A;  4JP6 A;  5GLY A;  3M3G A;  3X2N A;  2PIC A;  4JJO A;  3X2J A;  2PJJ A;  2KQA A;  1N10 A;  3D30 A;  2G6G A;  2PI8 A;  3CZB A;  3X2K A;  4FG4 A;  3SUJ A;  4AVR A;  3X2P A;  1BW4 A;  2ENG A;  2HCZ X;  2G5D A;  4JCW A;  2GAE A;  5GM9 A;  4FFT A;  3ENG A;  4FER A;  4ENG A;  3X2G A;  3X2M A;  3X2L A;  3SUM A;  1BW3 A;  2AE0 X; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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