3X2KA

X-ray structure of pccel45a d114n with cellopentaose at 95k.
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFNICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2kA00
4JCWA 2ENGA 2G5DA 1BW4A 2PI8A 3X2PA 1N10A 3ENGA 4JS7A 2PICA 3SUKA 3X2GA 3M3GA 2AE0X 3X2HA 1HD5A 3CZBA 2PNWA 4ENGA 3SUJA 3SULA 5H4UA 4ZM7A 3X2LA 1L8FA 5GM9A 2G6GA 3SUMA 1OA9A 1OA7A 3X2JA 5GLXA 4AVRA 3X2OA 3X2IA 3D30A 4FG2A 5GLYA 3X2NA 4FERA 4JP6A 4FFTA 1BW3A 2BH0A 2GAEA 3X2KA 3X2MA 4JP7A 4FG4A 2HCZX 4JJOA 2PJJA 4L48A 2KQAA 1WC2A
chains in the Genus database with same CATH superfamily
2PJHB 1KQGA 1S3SA 2CW0D 3X2PA 3TIWA 2JIOA 4AAYA 1SIWA 3FKIA 3SUKA 1TWAA 1PT0A 2NVYA 2PNWA 3SUJA 3SULA 2C45A 2BE5D 5GM9A 1OA9A 2V3VA 4AZDA 1E18A 1YNND 4KODA 1TMOA 1YNJD 2EEOB 5GLYA 1BW3A 1AW8B 2NYAA 2E7ZA 4AYBA 3X2MA 3GTKA 1PQEA 2JIRA 1R27A 2HCZX 3GTGA 3HU3A 4JJOA 2JIPA 2Y0SA 3GTOA 2E2IA 3HKZA 4JCWA 2ENGA 2PI8A 3QQ8A 1E60A 1N10A 4GA6A 1PQHA 1DMSA 1OGYA 2B63A 1R7RA 2NAPA 5C18A 1H0HA 2R92A 3QWZA 1Q16A 1AA6A 1TWGA 3SUMA 2E2HA 2A69D 3IR5A 5GLXA 4KDLA 4AVRA 2VPXA 4C2MA 1DMRA 3O5AA 1PYUB 2PMZA 5DYGA 3QQ7A 2A68D 4KO8A 4FERA 4JP6A 2O5JD 2BH0A 2JA5A 1E5VA 5FTKA 1YLEA 1IW7D 4JP7A 3H0GA 4D7ZB 1TWCA 5EPPA 2NVXA 2A6ED 4RV0A 5FTNA 4QIWA 5FTLA 4CRZA 2R7ZA 1Y1VA 4DMRA 2G5DA 5T5MD 1R9TA 1PQFA 3HU2A 3TM7B 1TWHA 5GLFA 2JIMA 3ENGA 3ML1A 2PICA 3X2GA 2AE0X 2VPWA 2VPZA 3X2HA 5B6CA 3GTPA 2JIQA 3CZBA 4ZM7A 4ENGA 1QDNA 1KQFA 3X2LA 1PT1A 1Y5IA 2YUJA 3CQZA 1Y1WA 1ZYRD 3CF2A 5C1BA 4CS0A 3X2JA 5T5ID 1EU1A 3OUGA 1FDOA 1I3QA 3X2OA 3IR6A 1PYQA 2DMRA 2YU9A 3DMRA 4FG2A 1G8JA 3QC8A 3X2NA 4FFTA 1TWFA 3IR7A 1CZ4A 2V45A 3HU1A 1SFOA 1FDIA 1SMYD 2PJJA 4L48A 3GTLA 4CRYG 1BW4A 4KDIA 1QCSA 2R93A 1UHEA 4AONB 4JS7A 2JA7A 3M3GA 4GA5A 2A6HD 1H5NA 1WLFA 2WB1A 1HD5A 5H4UA 3GTQA 1L8FA 5FTJA 2VUMA 2G6GA 1I50A 3GTJA 3PLXB 1OA7A 1Y4ZA 2WAQA 1UHDA 5FTMA 1ZC1A 3X2IA 3D30A 2VPYA 5DYIA 1K83A 4KLNA 1WCMA 2IV2X 2GAEA 1G8KA 1E32A 3X2KA 2JA6A 4FG4A 1CZ5A 4AOKB 1E61A 2KI8A 1PPYA 1VC3B 3GTMA 1CR5A 4NOHA 2KQAA 1WC2A
chains in the Genus database with same CATH topology
4JCWA 2ENGA 2G5DA 1BW4A 2PI8A 3X2PA 1N10A 3ENGA 4JS7A 2PICA 3SUKA 3X2GA 3M3GA 2AE0X 3X2HA 1HD5A 3CZBA 2PNWA 4ENGA 3SUJA 3SULA 5H4UA 4ZM7A 3X2LA 1L8FA 5GM9A 2G6GA 3SUMA 1OA9A 1OA7A 3X2JA 5GLXA 4AVRA 3X2OA 3X2IA 3D30A 4FG2A 5GLYA 3X2NA 4FERA 4JP6A 4FFTA 1BW3A 2BH0A 2GAEA 3X2KA 3X2MA 4JP7A 4FG4A 2HCZX 4JJOA 2PJJA 4L48A 2KQAA 1WC2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4JCW A;  2ENG A;  2G5D A;  1BW4 A;  2PI8 A;  3X2P A;  1N10 A;  3ENG A;  4JS7 A;  2PIC A;  3SUK A;  3X2G A;  3M3G A;  2AE0 X;  3X2H A;  1HD5 A;  3CZB A;  2PNW A;  4ENG A;  3SUJ A;  3SUL A;  5H4U A;  4ZM7 A;  3X2L A;  1L8F A;  5GM9 A;  2G6G A;  3SUM A;  1OA9 A;  1OA7 A;  3X2J A;  5GLX A;  4AVR A;  3X2O A;  3X2I A;  3D30 A;  4FG2 A;  5GLY A;  3X2N A;  4FER A;  4JP6 A;  4FFT A;  1BW3 A;  2BH0 A;  2GAE A;  3X2K A;  3X2M A;  4JP7 A;  4FG4 A;  2HCZ X;  4JJO A;  2PJJ A;  4L48 A;  2KQA A;  1WC2 A; 
#chains in the Genus database with same CATH topology
 2PJH B;  1KQG A;  1S3S A;  2CW0 D;  3X2P A;  3TIW A;  2JIO A;  4AAY A;  1SIW A;  3FKI A;  3SUK A;  1TWA A;  1PT0 A;  2NVY A;  2PNW A;  3SUJ A;  3SUL A;  2C45 A;  2BE5 D;  5GM9 A;  1OA9 A;  2V3V A;  4AZD A;  1E18 A;  1YNN D;  4KOD A;  1TMO A;  1YNJ D;  2EEO B;  5GLY A;  1BW3 A;  1AW8 B;  2NYA A;  2E7Z A;  4AYB A;  3X2M A;  3GTK A;  1PQE A;  2JIR A;  1R27 A;  2HCZ X;  3GTG A;  3HU3 A;  4JJO A;  2JIP A;  2Y0S A;  3GTO A;  2E2I A;  3HKZ A;  4JCW A;  2ENG A;  2PI8 A;  3QQ8 A;  1E60 A;  1N10 A;  4GA6 A;  1PQH A;  1DMS A;  1OGY A;  2B63 A;  1R7R A;  2NAP A;  5C18 A;  1H0H A;  2R92 A;  3QWZ A;  1Q16 A;  1AA6 A;  1TWG A;  3SUM A;  2E2H A;  2A69 D;  3IR5 A;  5GLX A;  4KDL A;  4AVR A;  2VPX A;  4C2M A;  1DMR A;  3O5A A;  1PYU B;  2PMZ A;  5DYG A;  3QQ7 A;  2A68 D;  4KO8 A;  4FER A;  4JP6 A;  2O5J D;  2BH0 A;  2JA5 A;  1E5V A;  5FTK A;  1YLE A;  1IW7 D;  4JP7 A;  3H0G A;  4D7Z B;  1TWC A;  5EPP A;  2NVX A;  2A6E D;  4RV0 A;  5FTN A;  4QIW A;  5FTL A;  4CRZ A;  2R7Z A;  1Y1V A;  4DMR A;  2G5D A;  5T5M D;  1R9T A;  1PQF A;  3HU2 A;  3TM7 B;  1TWH A;  5GLF A;  2JIM A;  3ENG A;  3ML1 A;  2PIC A;  3X2G A;  2AE0 X;  2VPW A;  2VPZ A;  3X2H A;  5B6C A;  3GTP A;  2JIQ A;  3CZB A;  4ZM7 A;  4ENG A;  1QDN A;  1KQF A;  3X2L A;  1PT1 A;  1Y5I A;  2YUJ A;  3CQZ A;  1Y1W A;  1ZYR D;  3CF2 A;  5C1B A;  4CS0 A;  3X2J A;  5T5I D;  1EU1 A;  3OUG A;  1FDO A;  1I3Q A;  3X2O A;  3IR6 A;  1PYQ A;  2DMR A;  2YU9 A;  3DMR A;  4FG2 A;  1G8J A;  3QC8 A;  3X2N A;  4FFT A;  1TWF A;  3IR7 A;  1CZ4 A;  2V45 A;  3HU1 A;  1SFO A;  1FDI A;  1SMY D;  2PJJ A;  4L48 A;  3GTL A;  4CRY G;  1BW4 A;  4KDI A;  1QCS A;  2R93 A;  1UHE A;  4AON B;  4JS7 A;  2JA7 A;  3M3G A;  4GA5 A;  2A6H D;  1H5N A;  1WLF A;  2WB1 A;  1HD5 A;  5H4U A;  3GTQ A;  1L8F A;  5FTJ A;  2VUM A;  2G6G A;  1I50 A;  3GTJ A;  3PLX B;  1OA7 A;  1Y4Z A;  2WAQ A;  1UHD A;  5FTM A;  1ZC1 A;  3X2I A;  3D30 A;  2VPY A;  5DYI A;  1K83 A;  4KLN A;  1WCM A;  2IV2 X;  2GAE A;  1G8K A;  1E32 A;  3X2K A;  2JA6 A;  4FG4 A;  1CZ5 A;  4AOK B;  1E61 A;  2KI8 A;  1PPY A;  1VC3 B;  3GTM A;  1CR5 A;  4NOH A;  2KQA A;  1WC2 A; 
#chains in the Genus database with same CATH homology
 4JCW A;  2ENG A;  2G5D A;  1BW4 A;  2PI8 A;  3X2P A;  1N10 A;  3ENG A;  4JS7 A;  2PIC A;  3SUK A;  3X2G A;  3M3G A;  2AE0 X;  3X2H A;  1HD5 A;  3CZB A;  2PNW A;  4ENG A;  3SUJ A;  3SUL A;  5H4U A;  4ZM7 A;  3X2L A;  1L8F A;  5GM9 A;  2G6G A;  3SUM A;  1OA9 A;  1OA7 A;  3X2J A;  5GLX A;  4AVR A;  3X2O A;  3X2I A;  3D30 A;  4FG2 A;  5GLY A;  3X2N A;  4FER A;  4JP6 A;  4FFT A;  1BW3 A;  2BH0 A;  2GAE A;  3X2K A;  3X2M A;  4JP7 A;  4FG4 A;  2HCZ X;  4JJO A;  2PJJ A;  4L48 A;  2KQA A;  1WC2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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