3X2LA

X-ray structure of pccel45a apo form at 95k.
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
molecule keywords Endoglucanase V-like protein
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2lA00
2PJJA 1OA7A 3ENGA 1N10A 3SUMA 2AE0X 4FFTA 3X2MA 5GLYA 2G5DA 5GLXA 4AVRA 3X2KA 1OA9A 1HD5A 2G6GA 3X2NA 5GM9A 5H4UA 4JP6A 2PI8A 3X2IA 2ENGA 1WC2A 2KQAA 3M3GA 3CZBA 3SUJA 3X2HA 4L48A 4JJOA 4ENGA 3X2LA 4JP7A 1L8FA 3D30A 3SULA 3X2GA 2BH0A 4JCWA 3X2OA 1BW4A 2HCZX 1BW3A 3SUKA 3X2JA 2PNWA 4FG4A 3X2PA 4FERA 4ZM7A 4JS7A 2PICA 2GAEA 4FG2A
chains in the Genus database with same CATH superfamily
3GTKA 4AYBA 3SUMA 1Y1VA 2A68D 1Q16A 4FFTA 4KODA 1CZ5A 2VPWA 1PQHA 2PMZA 4KDIA 1PYQA 1YNND 2C45A 3HKZA 3X2KA 3X2NA 1HD5A 4DMRA 4D7ZB 3QWZA 1E18A 2V3VA 1WC2A 2BE5D 1ZC1A 4GA6A 3X2HA 1KQGA 4L48A 3GTMA 1YLEA 3QC8A 5T5MD 1CZ4A 2YUJA 3X2LA 1TMOA 4AOKB 2A69D 3GTQA 4AAYA 2JIPA 2JIQA 3SULA 2BH0A 1H5NA 4JCWA 4CS0A 2PJHB 2R93A 1SMYD 1OA7A 2PICA 2VPXA 4CRYG 2GAEA 1TWGA 4FERA 2PJJA 3QQ8A 1N10A 1UHDA 3GTPA 3GTLA 2IV2X 1Y1WA 1PQEA 3X2MA 1DMSA 1R27A 1WCMA 1SIWA 2G5DA 4AVRA 5FTLA 3ML1A 4CRZA 2E7ZA 1ZYRD 2Y0SA 3X2IA 1TWHA 3SUJA 3M3GA 1K83A 2JA7A 4RV0A 3OUGA 2JA5A 2A6ED 1IW7D 1E60A 4JP7A 3GTOA 1QCSA 1L8FA 3X2GA 3X2OA 1BW3A 1CR5A 2HCZX 4NOHA 2JIOA 1E32A 2PNWA 3CF2A 4FG4A 4QIWA 3X2JA 4AZDA 4ZM7A 5FTJA 4JS7A 1UHEA 3CQZA 2NVYA 5EPPA 2VPYA 5FTMA 1FDOA 5C18A 1S3SA 2AE0X 1DMRA 2R92A 3FKIA 5GLYA 3GTGA 5GLXA 3PLXB 2V45A 1PPYA 2CW0D 5C1BA 3IR7A 5H4UA 4KLNA 5B6CA 2KI8A 1SFOA 4JP6A 5FTNA 1QDNA 3TM7B 3CZBA 1G8KA 4JJOA 2R7ZA 2E2IA 1PYUB 1VC3B 4AONB 5FTKA 2NYAA 2E2HA 1Y4ZA 3SUKA 1I3QA 3X2PA 2NVXA 1TWCA 2A6HD 1PT0A 3TIWA 1H0HA 3HU2A 5DYIA 4FG2A 1YNJD 3ENGA 3IR6A 5GLFA 1AW8B 1AA6A 1FDIA 1OGYA 1I50A 4KDLA 1Y5IA 3IR5A 1EU1A 1R9TA 1E5VA 3GTJA 2O5JD 2WB1A 2B63A 1OA9A 2G6GA 1R7RA 3O5AA 4GA5A 1E61A 5GM9A 1KQFA 2EEOB 2DMRA 2JIMA 1TWFA 2ENGA 2KQAA 2PI8A 2VPZA 3H0GA 5DYGA 4C2MA 2YU9A 2VUMA 4ENGA 2JIRA 1WLFA 1PT1A 1PQFA 1TWAA 3D30A 2WAQA 3QQ7A 1BW4A 4KO8A 2JA6A 5T5ID 1G8JA 2NAPA 3HU1A 3DMRA 3HU3A
chains in the Genus database with same CATH topology
2PJJA 1OA7A 3ENGA 1N10A 3SUMA 2AE0X 4FFTA 3X2MA 5GLYA 2G5DA 5GLXA 4AVRA 3X2KA 1OA9A 1HD5A 2G6GA 3X2NA 5GM9A 5H4UA 4JP6A 2PI8A 3X2IA 2ENGA 1WC2A 2KQAA 3M3GA 3CZBA 3SUJA 3X2HA 4L48A 4JJOA 4ENGA 3X2LA 4JP7A 1L8FA 3D30A 3SULA 3X2GA 2BH0A 4JCWA 3X2OA 1BW4A 2HCZX 1BW3A 3SUKA 3X2JA 2PNWA 4FG4A 3X2PA 4FERA 4ZM7A 4JS7A 2PICA 2GAEA 4FG2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2PJJ A;  1OA7 A;  3ENG A;  1N10 A;  3SUM A;  2AE0 X;  4FFT A;  3X2M A;  5GLY A;  2G5D A;  5GLX A;  4AVR A;  3X2K A;  1OA9 A;  1HD5 A;  2G6G A;  3X2N A;  5GM9 A;  5H4U A;  4JP6 A;  2PI8 A;  3X2I A;  2ENG A;  1WC2 A;  2KQA A;  3M3G A;  3CZB A;  3SUJ A;  3X2H A;  4L48 A;  4JJO A;  4ENG A;  3X2L A;  4JP7 A;  1L8F A;  3D30 A;  3SUL A;  3X2G A;  2BH0 A;  4JCW A;  3X2O A;  1BW4 A;  2HCZ X;  1BW3 A;  3SUK A;  3X2J A;  2PNW A;  4FG4 A;  3X2P A;  4FER A;  4ZM7 A;  4JS7 A;  2PIC A;  2GAE A;  4FG2 A; 
#chains in the Genus database with same CATH topology
 3GTK A;  4AYB A;  3SUM A;  1Y1V A;  2A68 D;  1Q16 A;  4FFT A;  4KOD A;  1CZ5 A;  2VPW A;  1PQH A;  2PMZ A;  4KDI A;  1PYQ A;  1YNN D;  2C45 A;  3HKZ A;  3X2K A;  3X2N A;  1HD5 A;  4DMR A;  4D7Z B;  3QWZ A;  1E18 A;  2V3V A;  1WC2 A;  2BE5 D;  1ZC1 A;  4GA6 A;  3X2H A;  1KQG A;  4L48 A;  3GTM A;  1YLE A;  3QC8 A;  5T5M D;  1CZ4 A;  2YUJ A;  3X2L A;  1TMO A;  4AOK B;  2A69 D;  3GTQ A;  4AAY A;  2JIP A;  2JIQ A;  3SUL A;  2BH0 A;  1H5N A;  4JCW A;  4CS0 A;  2PJH B;  2R93 A;  1SMY D;  1OA7 A;  2PIC A;  2VPX A;  4CRY G;  2GAE A;  1TWG A;  4FER A;  2PJJ A;  3QQ8 A;  1N10 A;  1UHD A;  3GTP A;  3GTL A;  2IV2 X;  1Y1W A;  1PQE A;  3X2M A;  1DMS A;  1R27 A;  1WCM A;  1SIW A;  2G5D A;  4AVR A;  5FTL A;  3ML1 A;  4CRZ A;  2E7Z A;  1ZYR D;  2Y0S A;  3X2I A;  1TWH A;  3SUJ A;  3M3G A;  1K83 A;  2JA7 A;  4RV0 A;  3OUG A;  2JA5 A;  2A6E D;  1IW7 D;  1E60 A;  4JP7 A;  3GTO A;  1QCS A;  1L8F A;  3X2G A;  3X2O A;  1BW3 A;  1CR5 A;  2HCZ X;  4NOH A;  2JIO A;  1E32 A;  2PNW A;  3CF2 A;  4FG4 A;  4QIW A;  3X2J A;  4AZD A;  4ZM7 A;  5FTJ A;  4JS7 A;  1UHE A;  3CQZ A;  2NVY A;  5EPP A;  2VPY A;  5FTM A;  1FDO A;  5C18 A;  1S3S A;  2AE0 X;  1DMR A;  2R92 A;  3FKI A;  5GLY A;  3GTG A;  5GLX A;  3PLX B;  2V45 A;  1PPY A;  2CW0 D;  5C1B A;  3IR7 A;  5H4U A;  4KLN A;  5B6C A;  2KI8 A;  1SFO A;  4JP6 A;  5FTN A;  1QDN A;  3TM7 B;  3CZB A;  1G8K A;  4JJO A;  2R7Z A;  2E2I A;  1PYU B;  1VC3 B;  4AON B;  5FTK A;  2NYA A;  2E2H A;  1Y4Z A;  3SUK A;  1I3Q A;  3X2P A;  2NVX A;  1TWC A;  2A6H D;  1PT0 A;  3TIW A;  1H0H A;  3HU2 A;  5DYI A;  4FG2 A;  1YNJ D;  3ENG A;  3IR6 A;  5GLF A;  1AW8 B;  1AA6 A;  1FDI A;  1OGY A;  1I50 A;  4KDL A;  1Y5I A;  3IR5 A;  1EU1 A;  1R9T A;  1E5V A;  3GTJ A;  2O5J D;  2WB1 A;  2B63 A;  1OA9 A;  2G6G A;  1R7R A;  3O5A A;  4GA5 A;  1E61 A;  5GM9 A;  1KQF A;  2EEO B;  2DMR A;  2JIM A;  1TWF A;  2ENG A;  2KQA A;  2PI8 A;  2VPZ A;  3H0G A;  5DYG A;  4C2M A;  2YU9 A;  2VUM A;  4ENG A;  2JIR A;  1WLF A;  1PT1 A;  1PQF A;  1TWA A;  3D30 A;  2WAQ A;  3QQ7 A;  1BW4 A;  4KO8 A;  2JA6 A;  5T5I D;  1G8J A;  2NAP A;  3HU1 A;  3DMR A;  3HU3 A; 
#chains in the Genus database with same CATH homology
 2PJJ A;  1OA7 A;  3ENG A;  1N10 A;  3SUM A;  2AE0 X;  4FFT A;  3X2M A;  5GLY A;  2G5D A;  5GLX A;  4AVR A;  3X2K A;  1OA9 A;  1HD5 A;  2G6G A;  3X2N A;  5GM9 A;  5H4U A;  4JP6 A;  2PI8 A;  3X2I A;  2ENG A;  1WC2 A;  2KQA A;  3M3G A;  3CZB A;  3SUJ A;  3X2H A;  4L48 A;  4JJO A;  4ENG A;  3X2L A;  4JP7 A;  1L8F A;  3D30 A;  3SUL A;  3X2G A;  2BH0 A;  4JCW A;  3X2O A;  1BW4 A;  2HCZ X;  1BW3 A;  3SUK A;  3X2J A;  2PNW A;  4FG4 A;  3X2P A;  4FER A;  4ZM7 A;  4JS7 A;  2PIC A;  2GAE A;  4FG2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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