3X2LA

X-ray structure of pccel45a apo form at 95k.
Total Genus 51
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2lA00
1OA9A 5H4UA 4JS7A 2AE0X 1N10A 3D30A 4JP7A 1BW3A 4FG2A 5GM9A 2GAEA 3X2JA 4AVRA 2KQAA 1OA7A 4JP6A 4L48A 3X2GA 4JJOA 1HD5A 3SUJA 4FERA 3X2HA 1L8FA 3X2OA 3SUKA 2PICA 3X2NA 2ENGA 2PNWA 3X2PA 3X2MA 3CZBA 2PI8A 4JCWA 3ENGA 3X2IA 3M3GA 2BH0A 5GLYA 1BW4A 1WC2A 4ZM7A 4FFTA 2G6GA 4FG4A 2PJJA 3X2LA 5GLXA 3X2KA 3SUMA 4ENGA 2G5DA 3SULA 2HCZX
chains in the Genus database with same CATH superfamily
1OA9A 3H0GA 1PQFA 1PQHA 1BW3A 5C18A 2NVYA 1R27A 3FKIA 4KO8A 4AVRA 3HU2A 1OA7A 2KQAA 5FTJA 5T5MD 2E2HA 3QWZA 1R7RA 4L48A 3GTLA 1E32A 1HD5A 3X2HA 1Q16A 1PT0A 1H0HA 1UHEA 4AOKB 3X2PA 3X2MA 1EU1A 2B63A 4RV0A 2JIOA 2E2IA 3M3GA 2BH0A 4ZM7A 2VPXA 3QQ8A 2G6GA 1QDNA 2PJJA 3X2KA 4AYBA 2WAQA 2G5DA 1ZYRD 4D7ZB 3CF2A 1UHDA 2YUJA 3SULA 1PQEA 2R92A 4QIWA 2VUMA 1YNJD 1AW8B 3GTJA 1N10A 3D30A 4GA6A 4FG2A 5FTKA 2KI8A 3GTPA 2GAEA 5DYGA 5GLFA 2BE5D 2JA7A 1SMYD 1KQFA 2DMRA 4JJOA 3IR5A 3QC8A 3SUJA 3GTQA 4FERA 1TWAA 5DYIA 1AA6A 1L8FA 5FTNA 2JIMA 3X2NA 3DMRA 1S3SA 2PNWA 2V3VA 1ZC1A 5T5ID 1CZ5A 4KDLA 2NYAA 1TWCA 4JCWA 1H5NA 5B6CA 3HKZA 3ENGA 4AZDA 2YU9A 5GLYA 2A69D 4FFTA 1KQGA 2JIQA 4KLNA 2VPWA 3SUMA 1R9TA 1SFOA 2HCZX 4C2MA 4JS7A 2AE0X 1I50A 5GM9A 1QCSA 2WB1A 1I3QA 2JA6A 2C45A 4KDIA 1Y1VA 4NOHA 4AONB 3IR6A 4KODA 3GTGA 5C1BA 1IW7D 3SUKA 3IR7A 1Y4ZA 1E18A 2PI8A 5FTLA 2JA5A 3TIWA 2NVXA 2Y0SA 1DMRA 2EEOB 1Y5IA 3X2IA 2JIRA 1WC2A 4AAYA 3GTOA 3HU3A 1K83A 4FG4A 3X2LA 5GLXA 1TWGA 1YLEA 2A6ED 1SIWA 1G8KA 2A6HD 1VC3B 1G8JA 3GTMA 1CR5A 3O5AA 4CS0A 5H4UA 1E5VA 2O5JD 4JP7A 1TWHA 5FTMA 1TWFA 2A68D 2V45A 1OGYA 1WCMA 3OUGA 3CQZA 3X2JA 2CW0D 3ML1A 3QQ7A 4JP6A 2VPZA 2VPYA 1PPYA 1FDOA 1WLFA 1FDIA 1PYUB 5EPPA 2IV2X 3X2GA 4DMRA 1E61A 1E60A 3PLXB 3X2OA 3TM7B 2PICA 1DMSA 2ENGA 1YNND 2E7ZA 2R7ZA 3CZBA 3GTKA 1TMOA 2PJHB 4GA5A 1PYQA 1BW4A 1Y1WA 4CRYG 4CRZA 1CZ4A 1PT1A 2JIPA 4ENGA 2PMZA 2NAPA 3HU1A 2R93A
chains in the Genus database with same CATH topology
1OA9A 5H4UA 4JS7A 2AE0X 1N10A 3D30A 4JP7A 1BW3A 4FG2A 5GM9A 2GAEA 3X2JA 4AVRA 2KQAA 1OA7A 4JP6A 4L48A 3X2GA 4JJOA 1HD5A 3SUJA 4FERA 3X2HA 1L8FA 3X2OA 3SUKA 2PICA 3X2NA 2ENGA 2PNWA 3X2PA 3X2MA 3CZBA 2PI8A 4JCWA 3ENGA 3X2IA 3M3GA 2BH0A 5GLYA 1BW4A 1WC2A 4ZM7A 4FFTA 2G6GA 4FG4A 2PJJA 3X2LA 5GLXA 3X2KA 3SUMA 4ENGA 2G5DA 3SULA 2HCZX
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OA9 A;  5H4U A;  4JS7 A;  2AE0 X;  1N10 A;  3D30 A;  4JP7 A;  1BW3 A;  4FG2 A;  5GM9 A;  2GAE A;  3X2J A;  4AVR A;  2KQA A;  1OA7 A;  4JP6 A;  4L48 A;  3X2G A;  4JJO A;  1HD5 A;  3SUJ A;  4FER A;  3X2H A;  1L8F A;  3X2O A;  3SUK A;  2PIC A;  3X2N A;  2ENG A;  2PNW A;  3X2P A;  3X2M A;  3CZB A;  2PI8 A;  4JCW A;  3ENG A;  3X2I A;  3M3G A;  2BH0 A;  5GLY A;  1BW4 A;  1WC2 A;  4ZM7 A;  4FFT A;  2G6G A;  4FG4 A;  2PJJ A;  3X2L A;  5GLX A;  3X2K A;  3SUM A;  4ENG A;  2G5D A;  3SUL A;  2HCZ X; 
#chains in the Genus database with same CATH topology
 1OA9 A;  3H0G A;  1PQF A;  1PQH A;  1BW3 A;  5C18 A;  2NVY A;  1R27 A;  3FKI A;  4KO8 A;  4AVR A;  3HU2 A;  1OA7 A;  2KQA A;  5FTJ A;  5T5M D;  2E2H A;  3QWZ A;  1R7R A;  4L48 A;  3GTL A;  1E32 A;  1HD5 A;  3X2H A;  1Q16 A;  1PT0 A;  1H0H A;  1UHE A;  4AOK B;  3X2P A;  3X2M A;  1EU1 A;  2B63 A;  4RV0 A;  2JIO A;  2E2I A;  3M3G A;  2BH0 A;  4ZM7 A;  2VPX A;  3QQ8 A;  2G6G A;  1QDN A;  2PJJ A;  3X2K A;  4AYB A;  2WAQ A;  2G5D A;  1ZYR D;  4D7Z B;  3CF2 A;  1UHD A;  2YUJ A;  3SUL A;  1PQE A;  2R92 A;  4QIW A;  2VUM A;  1YNJ D;  1AW8 B;  3GTJ A;  1N10 A;  3D30 A;  4GA6 A;  4FG2 A;  5FTK A;  2KI8 A;  3GTP A;  2GAE A;  5DYG A;  5GLF A;  2BE5 D;  2JA7 A;  1SMY D;  1KQF A;  2DMR A;  4JJO A;  3IR5 A;  3QC8 A;  3SUJ A;  3GTQ A;  4FER A;  1TWA A;  5DYI A;  1AA6 A;  1L8F A;  5FTN A;  2JIM A;  3X2N A;  3DMR A;  1S3S A;  2PNW A;  2V3V A;  1ZC1 A;  5T5I D;  1CZ5 A;  4KDL A;  2NYA A;  1TWC A;  4JCW A;  1H5N A;  5B6C A;  3HKZ A;  3ENG A;  4AZD A;  2YU9 A;  5GLY A;  2A69 D;  4FFT A;  1KQG A;  2JIQ A;  4KLN A;  2VPW A;  3SUM A;  1R9T A;  1SFO A;  2HCZ X;  4C2M A;  4JS7 A;  2AE0 X;  1I50 A;  5GM9 A;  1QCS A;  2WB1 A;  1I3Q A;  2JA6 A;  2C45 A;  4KDI A;  1Y1V A;  4NOH A;  4AON B;  3IR6 A;  4KOD A;  3GTG A;  5C1B A;  1IW7 D;  3SUK A;  3IR7 A;  1Y4Z A;  1E18 A;  2PI8 A;  5FTL A;  2JA5 A;  3TIW A;  2NVX A;  2Y0S A;  1DMR A;  2EEO B;  1Y5I A;  3X2I A;  2JIR A;  1WC2 A;  4AAY A;  3GTO A;  3HU3 A;  1K83 A;  4FG4 A;  3X2L A;  5GLX A;  1TWG A;  1YLE A;  2A6E D;  1SIW A;  1G8K A;  2A6H D;  1VC3 B;  1G8J A;  3GTM A;  1CR5 A;  3O5A A;  4CS0 A;  5H4U A;  1E5V A;  2O5J D;  4JP7 A;  1TWH A;  5FTM A;  1TWF A;  2A68 D;  2V45 A;  1OGY A;  1WCM A;  3OUG A;  3CQZ A;  3X2J A;  2CW0 D;  3ML1 A;  3QQ7 A;  4JP6 A;  2VPZ A;  2VPY A;  1PPY A;  1FDO A;  1WLF A;  1FDI A;  1PYU B;  5EPP A;  2IV2 X;  3X2G A;  4DMR A;  1E61 A;  1E60 A;  3PLX B;  3X2O A;  3TM7 B;  2PIC A;  1DMS A;  2ENG A;  1YNN D;  2E7Z A;  2R7Z A;  3CZB A;  3GTK A;  1TMO A;  2PJH B;  4GA5 A;  1PYQ A;  1BW4 A;  1Y1W A;  4CRY G;  4CRZ A;  1CZ4 A;  1PT1 A;  2JIP A;  4ENG A;  2PMZ A;  2NAP A;  3HU1 A;  2R93 A; 
#chains in the Genus database with same CATH homology
 1OA9 A;  5H4U A;  4JS7 A;  2AE0 X;  1N10 A;  3D30 A;  4JP7 A;  1BW3 A;  4FG2 A;  5GM9 A;  2GAE A;  3X2J A;  4AVR A;  2KQA A;  1OA7 A;  4JP6 A;  4L48 A;  3X2G A;  4JJO A;  1HD5 A;  3SUJ A;  4FER A;  3X2H A;  1L8F A;  3X2O A;  3SUK A;  2PIC A;  3X2N A;  2ENG A;  2PNW A;  3X2P A;  3X2M A;  3CZB A;  2PI8 A;  4JCW A;  3ENG A;  3X2I A;  3M3G A;  2BH0 A;  5GLY A;  1BW4 A;  1WC2 A;  4ZM7 A;  4FFT A;  2G6G A;  4FG4 A;  2PJJ A;  3X2L A;  5GLX A;  3X2K A;  3SUM A;  4ENG A;  2G5D A;  3SUL A;  2HCZ X; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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