3X2LA

X-ray structure of pccel45a apo form at 95k.
Total Genus 51
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
51
sequence length
180
structure length
180
Chain Sequence
b'ATGGYVQQATGQASFTMYSGCGSPACGKAASGFTAAINQLAFGSAPGLGAGDACGRCFALTGNHDPYSPNYTGPFGQTIVVKVTDLCPVQGNQEFCGQTTSNPTNQHGMPFHFDICEDTGGSAKFFPSGHGALTGTFTEVSCSQWSGSDGGQLWNGACLSGETAPNWPSTACGNKGTAPS'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Endoglucanase V-like protein
publication title Newton s cradle proton relay with amide imidic acid tautomerization in inverting cellulase visualized by neutron crystallography
doi rcsb
source organism Phanerochaete chrysosporium
molecule tags Hydrolase
total genus 51
structure length 180
sequence length 180
ec nomenclature
pdb deposition date 2014-12-22
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.40.10 Mainly Beta Beta Barrel Barwin-like endoglucanases RlpA-like domain 3x2lA00
1WC2A 4FG4A 4FERA 2BH0A 4ZM7A 2ENGA 2PNWA 1HD5A 3D30A 3X2LA 4FFTA 3X2NA 2AE0X 3SULA 4AVRA 1BW3A 4JJOA 3X2MA 2KQAA 2PICA 4FG2A 2HCZX 5GM9A 3X2IA 3M3GA 3X2HA 1L8FA 3X2PA 4L48A 3SUJA 4ENGA 2GAEA 5H4UA 4JP7A 2G5DA 1OA7A 1BW4A 3X2OA 3CZBA 4JP6A 4JS7A 3X2JA 3X2KA 5GLYA 3SUMA 3X2GA 2PJJA 2PI8A 5GLXA 4JCWA 3ENGA 1OA9A 3SUKA 2G6GA 1N10A
chains in the Genus database with same CATH superfamily
2IV2X 4FERA 1G8JA 4CRYG 1QCSA 5T5MD 4ZM7A 3GTKA 5DYGA 4RV0A 3HU3A 4AONB 1PYQA 2Y0SA 4FFTA 4KODA 3QC8A 2A69D 4AVRA 3GTPA 4GA5A 2O5JD 3GTLA 4FG2A 4KO8A 4AAYA 2JA7A 3M3GA 1L8FA 1TMOA 4CS0A 2JA5A 1VC3B 1DMRA 3OUGA 3IR7A 4ENGA 2C45A 5H4UA 2EEOB 4JP7A 1OA7A 4AYBA 3X2OA 2DMRA 3CZBA 4JP6A 2R7ZA 3HU2A 1PYUB 3HKZA 3X2KA 3X2GA 2R92A 2PJHB 3ENGA 1PQHA 3CQZA 1PPYA 2G6GA 4KDLA 3QQ8A 5FTNA 5FTJA 3SUKA 1ZC1A 1TWCA 4CRZA 1WC2A 3GTOA 2BH0A 2VPZA 1EU1A 3GTJA 1TWAA 2E7ZA 1HD5A 5FTKA 1TWFA 5EPPA 1H0HA 3X2NA 1YNJD 3QWZA 1BW3A 1Y1WA 4JJOA 4QIWA 3CF2A 3X2MA 2HCZX 2R93A 4AZDA 1UHDA 2JIOA 2NVXA 1E18A 1I3QA 1H5NA 1E60A 2JA6A 1S3SA 3HU1A 2PMZA 1CZ4A 1WCMA 1SFOA 5FTMA 2JIMA 2NYAA 3SUMA 2PI8A 5GLXA 5C1BA 1R9TA 3TIWA 2VPYA 4NOHA 4AOKB 1PQFA 3DMRA 2WAQA 2E2IA 1I50A 4FG4A 2A6ED 1SMYD 2ENGA 1FDIA 3D30A 3IR5A 2NVYA 2A68D 1E5VA 1WLFA 5DYIA 2CW0D 1YLEA 2VPWA 3SULA 3GTGA 4GA6A 4KDIA 1R7RA 2KI8A 1Y5IA 1ZYRD 3PLXB 1CZ5A 2PICA 3ML1A 5GM9A 3X2IA 2NAPA 2B63A 4L48A 3TM7B 2E2HA 1CR5A 1FDOA 1E32A 2GAEA 5B6CA 3QQ7A 2G5DA 1BW4A 4JS7A 3H0GA 1E61A 3X2JA 1DMSA 1R27A 5GLYA 4D7ZB 3GTMA 1Q16A 3GTQA 1IW7D 1OA9A 2VUMA 1TWHA 1Y4ZA 1K83A 1N10A 2YU9A 1TWGA 2YUJA 3O5AA 4KLNA 4DMRA 1KQFA 2PNWA 1QDNA 2V45A 3X2LA 2VPXA 1AW8B 2AE0X 3IR6A 1G8KA 5GLFA 4C2MA 2KQAA 1Y1VA 3X2HA 3X2PA 5C18A 3FKIA 2JIQA 2A6HD 2V3VA 1PQEA 3SUJA 5T5ID 2JIRA 1KQGA 1OGYA 2WB1A 2JIPA 2BE5D 1AA6A 1PT1A 1YNND 2PJJA 4JCWA 1PT0A 1UHEA 5FTLA 1SIWA
chains in the Genus database with same CATH topology
1WC2A 4FG4A 4FERA 2BH0A 4ZM7A 2ENGA 2PNWA 1HD5A 3D30A 3X2LA 4FFTA 3X2NA 2AE0X 3SULA 4AVRA 1BW3A 4JJOA 3X2MA 2KQAA 2PICA 4FG2A 2HCZX 5GM9A 3X2IA 3M3GA 3X2HA 1L8FA 3X2PA 4L48A 3SUJA 4ENGA 2GAEA 5H4UA 4JP7A 2G5DA 1OA7A 1BW4A 3X2OA 3CZBA 4JP6A 4JS7A 3X2JA 3X2KA 5GLYA 3SUMA 3X2GA 2PJJA 2PI8A 5GLXA 4JCWA 3ENGA 1OA9A 3SUKA 2G6GA 1N10A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WC2 A;  4FG4 A;  4FER A;  2BH0 A;  4ZM7 A;  2ENG A;  2PNW A;  1HD5 A;  3D30 A;  3X2L A;  4FFT A;  3X2N A;  2AE0 X;  3SUL A;  4AVR A;  1BW3 A;  4JJO A;  3X2M A;  2KQA A;  2PIC A;  4FG2 A;  2HCZ X;  5GM9 A;  3X2I A;  3M3G A;  3X2H A;  1L8F A;  3X2P A;  4L48 A;  3SUJ A;  4ENG A;  2GAE A;  5H4U A;  4JP7 A;  2G5D A;  1OA7 A;  1BW4 A;  3X2O A;  3CZB A;  4JP6 A;  4JS7 A;  3X2J A;  3X2K A;  5GLY A;  3SUM A;  3X2G A;  2PJJ A;  2PI8 A;  5GLX A;  4JCW A;  3ENG A;  1OA9 A;  3SUK A;  2G6G A;  1N10 A; 
#chains in the Genus database with same CATH topology
 2IV2 X;  4FER A;  1G8J A;  4CRY G;  1QCS A;  5T5M D;  4ZM7 A;  3GTK A;  5DYG A;  4RV0 A;  3HU3 A;  4AON B;  1PYQ A;  2Y0S A;  4FFT A;  4KOD A;  3QC8 A;  2A69 D;  4AVR A;  3GTP A;  4GA5 A;  2O5J D;  3GTL A;  4FG2 A;  4KO8 A;  4AAY A;  2JA7 A;  3M3G A;  1L8F A;  1TMO A;  4CS0 A;  2JA5 A;  1VC3 B;  1DMR A;  3OUG A;  3IR7 A;  4ENG A;  2C45 A;  5H4U A;  2EEO B;  4JP7 A;  1OA7 A;  4AYB A;  3X2O A;  2DMR A;  3CZB A;  4JP6 A;  2R7Z A;  3HU2 A;  1PYU B;  3HKZ A;  3X2K A;  3X2G A;  2R92 A;  2PJH B;  3ENG A;  1PQH A;  3CQZ A;  1PPY A;  2G6G A;  4KDL A;  3QQ8 A;  5FTN A;  5FTJ A;  3SUK A;  1ZC1 A;  1TWC A;  4CRZ A;  1WC2 A;  3GTO A;  2BH0 A;  2VPZ A;  1EU1 A;  3GTJ A;  1TWA A;  2E7Z A;  1HD5 A;  5FTK A;  1TWF A;  5EPP A;  1H0H A;  3X2N A;  1YNJ D;  3QWZ A;  1BW3 A;  1Y1W A;  4JJO A;  4QIW A;  3CF2 A;  3X2M A;  2HCZ X;  2R93 A;  4AZD A;  1UHD A;  2JIO A;  2NVX A;  1E18 A;  1I3Q A;  1H5N A;  1E60 A;  2JA6 A;  1S3S A;  3HU1 A;  2PMZ A;  1CZ4 A;  1WCM A;  1SFO A;  5FTM A;  2JIM A;  2NYA A;  3SUM A;  2PI8 A;  5GLX A;  5C1B A;  1R9T A;  3TIW A;  2VPY A;  4NOH A;  4AOK B;  1PQF A;  3DMR A;  2WAQ A;  2E2I A;  1I50 A;  4FG4 A;  2A6E D;  1SMY D;  2ENG A;  1FDI A;  3D30 A;  3IR5 A;  2NVY A;  2A68 D;  1E5V A;  1WLF A;  5DYI A;  2CW0 D;  1YLE A;  2VPW A;  3SUL A;  3GTG A;  4GA6 A;  4KDI A;  1R7R A;  2KI8 A;  1Y5I A;  1ZYR D;  3PLX B;  1CZ5 A;  2PIC A;  3ML1 A;  5GM9 A;  3X2I A;  2NAP A;  2B63 A;  4L48 A;  3TM7 B;  2E2H A;  1CR5 A;  1FDO A;  1E32 A;  2GAE A;  5B6C A;  3QQ7 A;  2G5D A;  1BW4 A;  4JS7 A;  3H0G A;  1E61 A;  3X2J A;  1DMS A;  1R27 A;  5GLY A;  4D7Z B;  3GTM A;  1Q16 A;  3GTQ A;  1IW7 D;  1OA9 A;  2VUM A;  1TWH A;  1Y4Z A;  1K83 A;  1N10 A;  2YU9 A;  1TWG A;  2YUJ A;  3O5A A;  4KLN A;  4DMR A;  1KQF A;  2PNW A;  1QDN A;  2V45 A;  3X2L A;  2VPX A;  1AW8 B;  2AE0 X;  3IR6 A;  1G8K A;  5GLF A;  4C2M A;  2KQA A;  1Y1V A;  3X2H A;  3X2P A;  5C18 A;  3FKI A;  2JIQ A;  2A6H D;  2V3V A;  1PQE A;  3SUJ A;  5T5I D;  2JIR A;  1KQG A;  1OGY A;  2WB1 A;  2JIP A;  2BE5 D;  1AA6 A;  1PT1 A;  1YNN D;  2PJJ A;  4JCW A;  1PT0 A;  1UHE A;  5FTL A;  1SIW A; 
#chains in the Genus database with same CATH homology
 1WC2 A;  4FG4 A;  4FER A;  2BH0 A;  4ZM7 A;  2ENG A;  2PNW A;  1HD5 A;  3D30 A;  3X2L A;  4FFT A;  3X2N A;  2AE0 X;  3SUL A;  4AVR A;  1BW3 A;  4JJO A;  3X2M A;  2KQA A;  2PIC A;  4FG2 A;  2HCZ X;  5GM9 A;  3X2I A;  3M3G A;  3X2H A;  1L8F A;  3X2P A;  4L48 A;  3SUJ A;  4ENG A;  2GAE A;  5H4U A;  4JP7 A;  2G5D A;  1OA7 A;  1BW4 A;  3X2O A;  3CZB A;  4JP6 A;  4JS7 A;  3X2J A;  3X2K A;  5GLY A;  3SUM A;  3X2G A;  2PJJ A;  2PI8 A;  5GLX A;  4JCW A;  3ENG A;  1OA9 A;  3SUK A;  2G6G A;  1N10 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...